View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19598_low_47 (Length: 251)
Name: NF19598_low_47
Description: NF19598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19598_low_47 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 27122767 - 27122544
Alignment:
| Q |
18 |
ccaatgattgaagaacttggggcctatttggaccaatcaaatcagagaaatctatgattggtaactgtaggttttgtttgccaaaatttgaatcttcagt |
117 |
Q |
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| T |
27122767 |
ccaatgattgaagaacttggggcctatttggaccaatcaaatcagagaaatctatgattggtaactgtaggttttgtttgccaaaatttgaatcttcggt |
27122668 |
T |
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| Q |
118 |
attcttagcaggacgttcagaaggaggaagtatgtactctttaggtaccatgttaagtccattatcaactagctgcttcactcctttcagaaattgattt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27122667 |
attcttagcaggacgttcagaaggaggaagtatgtactttttaggtaccatgtgaagtccattatcaactagctgcttcactcctttcagaaattgattt |
27122568 |
T |
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| Q |
218 |
tctatatcatcatcgtcccctttg |
241 |
Q |
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||||||||||||||||||| |||| |
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| T |
27122567 |
tctatatcatcatcgtcccttttg |
27122544 |
T |
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