View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19599_high_4 (Length: 426)
Name: NF19599_high_4
Description: NF19599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19599_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 217 - 414
Target Start/End: Complemental strand, 6946223 - 6946026
Alignment:
| Q |
217 |
atttcgcagccaacatgacaaggatattgagatacaaccaagacgactcaacaatgcaattaacatacctcagaattatacttcaccaacaccaaagatc |
316 |
Q |
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| T |
6946223 |
atttcgcagccaacatgataaggatattgagatacaaccaagacgactcaacaatgcaattaacatacctcagaattatacttcaccaacaccaaagatc |
6946124 |
T |
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| Q |
317 |
caaccaagagcctttccaaaattgtaacatctctacaactcctatcaagccagagaaaaggcaccatgaactacatcccagaagattgaccaacaatc |
414 |
Q |
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| T |
6946123 |
caaccaagagccttttcaaaattgtaacatctctacaactcctatcaagccagagaaaaggcaccatgaactacatcccagaagattgaccaacaatc |
6946026 |
T |
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