View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1959_high_2 (Length: 394)

Name: NF1959_high_2
Description: NF1959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1959_high_2
NF1959_high_2
[»] chr6 (28 HSPs)
chr6 (16-334)||(2891276-2891595)
chr6 (333-381)||(2890874-2890922)
chr6 (270-334)||(11062384-11062448)
chr6 (284-334)||(2720546-2720596)
chr6 (270-334)||(9352161-9352225)
chr6 (270-334)||(16520067-16520131)
chr6 (270-334)||(17851017-17851081)
chr6 (270-334)||(17851473-17851537)
chr6 (270-334)||(21312070-21312134)
chr6 (270-334)||(28780209-28780273)
chr6 (270-332)||(13492888-13492950)
chr6 (271-333)||(33774986-33775048)
chr6 (336-381)||(21312037-21312082)
chr6 (289-333)||(2890823-2890867)
chr6 (270-334)||(7912409-7912473)
chr6 (270-334)||(13492431-13492495)
chr6 (270-334)||(20126165-20126229)
chr6 (270-334)||(20850420-20850484)
chr6 (270-319)||(3652585-3652634)
chr6 (336-381)||(7911944-7911989)
chr6 (336-381)||(13191548-13191593)
chr6 (281-334)||(17205448-17205501)
chr6 (336-381)||(20896723-20896768)
chr6 (270-318)||(7911977-7912025)
chr6 (270-334)||(13191496-13191560)
chr6 (270-334)||(17027514-17027578)
chr6 (270-334)||(20735794-20735858)
chr6 (270-334)||(23986300-23986364)
[»] chr5 (28 HSPs)
chr5 (270-334)||(10927386-10927450)
chr5 (270-334)||(10926929-10926993)
chr5 (270-334)||(39147038-39147102)
chr5 (270-334)||(1822005-1822069)
chr5 (270-332)||(20039460-20039521)
chr5 (270-334)||(2193915-2193979)
chr5 (270-334)||(2474058-2474122)
chr5 (270-334)||(2474504-2474568)
chr5 (270-334)||(8642017-8642081)
chr5 (270-334)||(21886129-21886193)
chr5 (270-334)||(27646818-27646882)
chr5 (270-334)||(29680090-29680154)
chr5 (270-333)||(15512996-15513059)
chr5 (270-334)||(34371711-34371775)
chr5 (270-334)||(34372167-34372231)
chr5 (270-334)||(42788629-42788693)
chr5 (336-381)||(1821972-1822017)
chr5 (336-381)||(2193882-2193927)
chr5 (270-319)||(3886599-3886648)
chr5 (336-381)||(10926981-10927026)
chr5 (336-381)||(10927438-10927483)
chr5 (336-381)||(17445490-17445535)
chr5 (336-381)||(34867856-34867901)
chr5 (336-381)||(42788681-42788726)
chr5 (270-334)||(189167-189231)
chr5 (270-334)||(3887040-3887104)
chr5 (270-334)||(8391305-8391369)
chr5 (270-334)||(17445438-17445502)
[»] scaffold0022 (3 HSPs)
scaffold0022 (258-334)||(163117-163193)
scaffold0022 (270-334)||(162661-162725)
scaffold0022 (258-334)||(163158-163234)
[»] chr4 (38 HSPs)
chr4 (270-334)||(1645726-1645790)
chr4 (270-334)||(23943219-23943283)
chr4 (270-328)||(27029376-27029434)
chr4 (270-334)||(7678599-7678663)
chr4 (270-334)||(12691976-12692040)
chr4 (270-334)||(23942766-23942830)
chr4 (270-334)||(50814802-50814866)
chr4 (270-334)||(53996092-53996156)
chr4 (270-332)||(15306070-15306132)
chr4 (285-334)||(29628645-29628694)
chr4 (270-334)||(3169305-3169369)
chr4 (270-334)||(44471302-44471366)
chr4 (270-334)||(49998735-49998799)
chr4 (270-334)||(50398515-50398579)
chr4 (270-333)||(27026602-27026664)
chr4 (270-332)||(14351894-14351956)
chr4 (300-334)||(23976195-23976229)
chr4 (288-334)||(35871744-35871790)
chr4 (272-334)||(50398970-50399032)
chr4 (336-381)||(1464213-1464258)
chr4 (336-381)||(4127466-4127511)
chr4 (336-381)||(4127918-4127963)
chr4 (336-381)||(7678651-7678696)
chr4 (336-381)||(12692028-12692073)
chr4 (336-381)||(14571750-14571795)
chr4 (336-381)||(14572179-14572224)
chr4 (284-333)||(21067844-21067893)
chr4 (336-381)||(21220360-21220405)
chr4 (336-381)||(23942818-23942863)
chr4 (336-381)||(24629006-24629051)
chr4 (336-381)||(24629462-24629507)
chr4 (336-381)||(44470903-44470948)
chr4 (336-381)||(44471354-44471399)
chr4 (336-381)||(49998702-49998747)
chr4 (336-381)||(50398567-50398612)
chr4 (270-334)||(4185814-4185878)
chr4 (270-334)||(24628954-24629018)
chr4 (270-334)||(51331258-51331322)
[»] chr3 (41 HSPs)
chr3 (270-334)||(25238667-25238731)
chr3 (270-334)||(50347845-50347909)
chr3 (270-319)||(25239075-25239124)
chr3 (270-334)||(2911194-2911258)
chr3 (270-334)||(4067343-4067407)
chr3 (270-334)||(8067379-8067443)
chr3 (270-334)||(13150537-13150601)
chr3 (270-334)||(25248210-25248274)
chr3 (270-334)||(28561845-28561909)
chr3 (270-334)||(30529786-30529850)
chr3 (270-334)||(31284259-31284323)
chr3 (270-334)||(32227204-32227268)
chr3 (270-334)||(39641036-39641100)
chr3 (270-334)||(39653263-39653327)
chr3 (270-334)||(11180017-11180081)
chr3 (270-334)||(13150082-13150146)
chr3 (270-334)||(14814048-14814112)
chr3 (270-334)||(14820253-14820317)
chr3 (270-334)||(16811480-16811544)
chr3 (270-334)||(20885100-20885164)
chr3 (270-334)||(25230231-25230295)
chr3 (270-334)||(25230688-25230752)
chr3 (270-334)||(25237818-25237882)
chr3 (270-334)||(25238275-25238339)
chr3 (270-334)||(32227599-32227663)
chr3 (274-334)||(37045138-37045198)
chr3 (270-333)||(16811024-16811087)
chr3 (334-381)||(25248175-25248222)
chr3 (270-333)||(41472399-41472462)
chr3 (333-375)||(25230746-25230788)
chr3 (333-375)||(25238333-25238375)
chr3 (270-332)||(27187315-27187377)
chr3 (336-381)||(11180069-11180114)
chr3 (336-381)||(13150589-13150634)
chr3 (336-381)||(28561812-28561857)
chr3 (336-381)||(31284311-31284356)
chr3 (336-381)||(32796970-32797015)
chr3 (336-381)||(50347812-50347857)
chr3 (306-334)||(15377419-15377447)
chr3 (270-334)||(25802531-25802595)
chr3 (270-334)||(32386717-32386781)
[»] chr8 (37 HSPs)
chr8 (270-332)||(31283636-31283698)
chr8 (270-334)||(2044157-2044221)
chr8 (270-334)||(22548978-22549042)
chr8 (270-334)||(6464893-6464957)
chr8 (270-334)||(8080325-8080389)
chr8 (270-334)||(12827237-12827301)
chr8 (270-334)||(22026478-22026542)
chr8 (270-334)||(22548532-22548596)
chr8 (270-334)||(25144871-25144935)
chr8 (270-334)||(28453437-28453501)
chr8 (274-334)||(32292500-32292560)
chr8 (273-332)||(3745203-3745262)
chr8 (270-333)||(10844599-10844662)
chr8 (270-333)||(41913069-41913132)
chr8 (270-331)||(10844982-10845043)
chr8 (270-334)||(25147635-25147699)
chr8 (270-334)||(27925998-27926062)
chr8 (270-334)||(33852241-33852305)
chr8 (270-334)||(34308918-34308982)
chr8 (272-334)||(15818999-15819060)
chr8 (335-381)||(22548584-22548630)
chr8 (270-332)||(25148066-25148128)
chr8 (290-332)||(27819231-27819273)
chr8 (258-319)||(10729710-10729771)
chr8 (336-381)||(10844949-10844994)
chr8 (336-381)||(12827289-12827334)
chr8 (289-334)||(21316092-21316137)
chr8 (336-381)||(22026445-22026490)
chr8 (336-381)||(22549030-22549075)
chr8 (273-334)||(27022321-27022382)
chr8 (336-381)||(27925965-27926010)
chr8 (336-381)||(41659140-41659185)
chr8 (265-333)||(10729670-10729738)
chr8 (270-334)||(12100790-12100854)
chr8 (274-334)||(17103184-17103244)
chr8 (336-380)||(22705238-22705282)
chr8 (270-334)||(34308462-34308526)
[»] chr7 (31 HSPs)
chr7 (270-332)||(6747583-6747645)
chr7 (270-334)||(679915-679979)
chr7 (258-334)||(7646502-7646578)
chr7 (270-334)||(2465832-2465896)
chr7 (270-334)||(2941740-2941804)
chr7 (270-334)||(13125119-13125183)
chr7 (270-334)||(28495591-28495655)
chr7 (270-334)||(28495953-28496017)
chr7 (270-334)||(35474104-35474168)
chr7 (270-334)||(42515191-42515255)
chr7 (270-334)||(42515643-42515707)
chr7 (260-334)||(7646461-7646535)
chr7 (272-334)||(34405574-34405636)
chr7 (270-331)||(9125058-9125119)
chr7 (274-334)||(2466027-2466087)
chr7 (270-334)||(2611635-2611699)
chr7 (270-334)||(6719057-6719121)
chr7 (270-334)||(13122488-13122552)
chr7 (270-334)||(26421288-26421352)
chr7 (270-334)||(36422351-36422415)
chr7 (270-309)||(16192418-16192457)
chr7 (270-332)||(5406573-5406635)
chr7 (288-334)||(43776273-43776319)
chr7 (336-381)||(2189210-2189255)
chr7 (336-381)||(2193322-2193367)
chr7 (336-381)||(6719109-6719154)
chr7 (336-381)||(6747633-6747678)
chr7 (336-381)||(9125025-9125070)
chr7 (336-381)||(36422318-36422363)
chr7 (270-334)||(2189243-2189307)
chr7 (270-334)||(46425840-46425904)
[»] scaffold0018 (1 HSPs)
scaffold0018 (270-334)||(10399-10463)
[»] chr2 (34 HSPs)
chr2 (270-334)||(16379036-16379100)
chr2 (270-334)||(24818425-24818489)
chr2 (270-334)||(1912624-1912687)
chr2 (270-334)||(8256625-8256689)
chr2 (270-334)||(11388286-11388350)
chr2 (270-334)||(16379492-16379556)
chr2 (270-334)||(25434039-25434103)
chr2 (270-334)||(33174602-33174666)
chr2 (270-334)||(41754388-41754452)
chr2 (270-333)||(29804781-29804844)
chr2 (290-334)||(16542105-16542149)
chr2 (336-380)||(30963299-30963343)
chr2 (270-334)||(30963703-30963767)
chr2 (270-334)||(30966789-30966853)
chr2 (270-333)||(1707140-1707203)
chr2 (335-381)||(1912590-1912636)
chr2 (270-332)||(30961868-30961930)
chr2 (336-381)||(1707107-1707152)
chr2 (336-381)||(5399852-5399897)
chr2 (336-381)||(8256592-8256637)
chr2 (270-319)||(18098876-18098925)
chr2 (336-381)||(18098913-18098958)
chr2 (336-381)||(25338032-25338077)
chr2 (336-381)||(29804748-29804793)
chr2 (336-381)||(30966300-30966345)
chr2 (336-381)||(30966756-30966801)
chr2 (336-381)||(33174569-33174614)
chr2 (336-381)||(33175024-33175069)
chr2 (270-319)||(33175057-33175106)
chr2 (336-381)||(33771067-33771112)
chr2 (270-334)||(5399800-5399864)
chr2 (270-334)||(25337980-25338044)
chr2 (270-334)||(30966333-30966397)
chr2 (270-334)||(33771100-33771164)
[»] chr1 (46 HSPs)
chr1 (270-334)||(20060323-20060387)
chr1 (270-333)||(12883623-12883686)
chr1 (270-334)||(20054519-20054583)
chr1 (270-334)||(20054975-20055039)
chr1 (270-334)||(20055431-20055495)
chr1 (270-334)||(20055887-20055951)
chr1 (270-334)||(20056343-20056407)
chr1 (270-334)||(20057246-20057310)
chr1 (270-334)||(20057702-20057766)
chr1 (270-334)||(20845644-20845708)
chr1 (270-334)||(43057506-43057570)
chr1 (270-334)||(50002268-50002332)
chr1 (270-325)||(2328414-2328469)
chr1 (270-333)||(52250305-52250368)
chr1 (270-333)||(52250642-52250705)
chr1 (270-333)||(52250979-52251042)
chr1 (270-332)||(43057050-43057112)
chr1 (270-332)||(51372859-51372921)
chr1 (270-331)||(20054066-20054127)
chr1 (270-334)||(12728091-12728155)
chr1 (270-334)||(16451916-16451980)
chr1 (270-334)||(16461069-16461133)
chr1 (270-334)||(20056799-20056863)
chr1 (270-334)||(35759591-35759655)
chr1 (270-334)||(38341005-38341069)
chr1 (336-383)||(38340972-38341019)
chr1 (284-333)||(8278070-8278119)
chr1 (336-381)||(16451968-16452013)
chr1 (336-381)||(16461121-16461166)
chr1 (336-381)||(20054115-20054160)
chr1 (336-381)||(20054571-20054616)
chr1 (336-381)||(20055027-20055072)
chr1 (336-381)||(20055483-20055528)
chr1 (336-381)||(20055939-20055984)
chr1 (336-381)||(20056395-20056440)
chr1 (336-381)||(20057298-20057343)
chr1 (336-381)||(20057754-20057799)
chr1 (336-381)||(20060375-20060420)
chr1 (270-319)||(20061189-20061238)
chr1 (336-381)||(20061226-20061271)
chr1 (336-381)||(35759643-35759688)
chr1 (336-381)||(35760949-35760994)
chr1 (336-381)||(50002742-50002787)
chr1 (336-381)||(52250272-52250317)
chr1 (270-334)||(35760897-35760961)
chr1 (270-334)||(46693718-46693782)
[»] scaffold0499 (2 HSPs)
scaffold0499 (270-334)||(2034-2098)
scaffold0499 (336-381)||(2086-2131)
[»] scaffold0277 (1 HSPs)
scaffold0277 (270-334)||(14685-14749)
[»] scaffold0243 (1 HSPs)
scaffold0243 (270-334)||(1319-1383)
[»] scaffold0047 (1 HSPs)
scaffold0047 (270-334)||(18118-18181)
[»] scaffold0020 (1 HSPs)
scaffold0020 (270-334)||(107446-107510)
[»] scaffold0389 (1 HSPs)
scaffold0389 (270-332)||(13518-13580)
[»] scaffold0557 (1 HSPs)
scaffold0557 (270-319)||(2204-2253)
[»] scaffold0024 (1 HSPs)
scaffold0024 (273-334)||(105822-105883)
[»] scaffold0168 (1 HSPs)
scaffold0168 (270-334)||(2841-2905)
[»] scaffold0002 (1 HSPs)
scaffold0002 (270-334)||(154856-154920)
[»] scaffold0007 (1 HSPs)
scaffold0007 (334-381)||(142309-142356)
[»] scaffold0088 (1 HSPs)
scaffold0088 (336-381)||(23739-23784)
[»] scaffold0040 (1 HSPs)
scaffold0040 (336-381)||(2245-2290)
[»] scaffold0005 (2 HSPs)
scaffold0005 (336-381)||(245152-245197)
scaffold0005 (336-381)||(245581-245626)
[»] scaffold0333 (3 HSPs)
scaffold0333 (333-381)||(4624-4672)
scaffold0333 (270-334)||(4660-4724)
scaffold0333 (270-334)||(5120-5184)
[»] scaffold0322 (1 HSPs)
scaffold0322 (270-334)||(19065-19129)


Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 16 - 334
Target Start/End: Complemental strand, 2891595 - 2891276
Alignment:
Q  16 gttatcatgtgaaaccaggctgcgggtaagaggagttaccaattgtataggtgctgctgtcggaatgtcctctgaacacacattattttcctcatcatta 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2891595 gttatcatgtgaaaccaggctgcgggtaagaggagttaccaattgtatag-tgctgctgtcggaatgtcctctgaacacacattattttcctcatcatta 2891497  T
Q  116 gactgtgtcgttgttccaatatcaatggttgcctcagccttagttgtttgttgaacctgctcaatctgttgttgcggctagggggaacaacttttgtttc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2891496 gactgtgtcgttgttccaatatcaatggttgcctcagccttagttgtttgttgaacctgctcaatctgttgttgcggctagggggaacaacttttgtttc 2891397  T
Q  216 tgtgtgcacctctacttcaaccggtgatgtaacatg---ttgtgcgctaccaaaaagaagatgcatctttgttttggtagcccattccataaaaactcca 312  Q
    |||||||||||| ||| |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2891396 tgtgtgcacctc-actacaaccggtgatgtaacatgttcttgtgcgctaccaaaaagaagatgcatctttgttttggtagcccattccataaaaactcca 2891298  T
Q  313 cagttaaatgtgcttgacttgg 334  Q
    ||||||||||||||||| ||||    
T  2891297 cagttaaatgtgcttgatttgg 2891276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 2890922 - 2890874
Alignment:
Q  333 ggtttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890922 ggtttataagaattgttagggactacctatatcaaaaagatgcttcttc 2890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 11062384 - 11062448
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  11062384 aagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgacttgg 11062448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 2720596 - 2720546
Alignment:
Q  284 ttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  2720596 ttttggtagctcattccataagaactccacagttaagtgtgcttgacttgg 2720546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 9352161 - 9352225
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  9352161 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 9352225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 16520067 - 16520131
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  16520067 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 16520131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 17851017 - 17851081
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  || ||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  17851017 aagatgcatcttctttctggtagcccattctataagaactccacagttaagcgtgcttgacttgg 17851081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 17851473 - 17851537
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||||||||| |||| ||||||||| ||||  |||||||||||||    
T  17851473 aagatgcatcttctttttggtagcccattctataagaactccacaattaagcgtgcttgacttgg 17851537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 21312070 - 21312134
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||| ||||| || |||| ||||||| |||||||||||||    
T  21312070 aagatgcatcttctttttggtagcccatttcataagaaatccatagttaaacgtgcttgacttgg 21312134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 28780209 - 28780273
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  28780209 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 28780273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 13492888 - 13492950
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||    
T  13492888 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactt 13492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 33775048 - 33774986
Alignment:
Q  271 agatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    |||||||||||  ||||| ||| ||||||||||| |||||||||||||| |||| ||||||||    
T  33775048 agatgcatcttctttttgatagtccattccataagaactccacagttaagtgtgtttgacttg 33774986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 21312037 - 21312082
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||    
T  21312037 ttataagaattgttaggtactacctatatcaacaagatgcatcttc 21312082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 2890867 - 2890823
Alignment:
Q  289 gtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||    
T  2890867 gtagcccattccataagaactccacagttaagcgtgcttgacttg 2890823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 7912409 - 7912473
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  ||| |||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  7912409 aagatgcattttcttttcggtagctcattccataagaactccatagttaaacgtgcttgacttgg 7912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 13492431 - 13492495
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||||  ||||||||| ||||||||||||||  |||||||||||||    
T  13492431 aagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtgcttgacttgg 13492495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20126229 - 20126165
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||||| || |||||| ||||  |||||||||||||    
T  20126229 aagatgcatcttctttttggtagcacattccataagaattccacaattaagcgtgcttgacttgg 20126165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 20850420 - 20850484
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||| ||||||||  |||||||||||||    
T  20850420 aagatgcatcttcttttcggtagctcattccataagaactctacagttaagcgtgcttgacttgg 20850484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 3652585 - 3652634
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||  |||||||||  |||||||||| ||||||||||||||    
T  3652585 aagatgcatcttctttttggtagttcattccataagaactccacagttaa 3652634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 7911944 - 7911989
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  7911944 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 7911989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 13191593 - 13191548
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  13191593 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 13191548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 17205448 - 17205501
Alignment:
Q  281 ttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||||||||||||||||||||| |||||||  ||||||  ||||||| ||||    
T  17205448 ttgttttggtagcccattccataagaactccattgttaaacatgcttgatttgg 17205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20896768 - 20896723
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20896768 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20896723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 7911977 - 7912025
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagtta 318  Q
    ||||||||||||  ||| |||||| |||||||||| |||||||||||||    
T  7911977 aagatgcatcttcttttcggtagctcattccataagaactccacagtta 7912025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 13191560 - 13191496
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| | |||||||| |||| |||||||||  |||||||||||||    
T  13191560 aagatgcatcttcttttcggtagctcgttccataagaacttcacagttaagcgtgcttgacttgg 13191496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 17027578 - 17027514
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||| ||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  17027578 aagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 17027514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 20735794 - 20735858
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||| |||||| |||||||||||| |||||| |||| ||| |||||    
T  20735794 aagatgcatcttcttttcggtagtccattctataaaaactccatagttaagtgtggttggcttgg 20735858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 23986364 - 23986300
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| ||  |||||| |||| ||||||||| ||||||||||||||    
T  23986364 aagatgcatcttcttttcggtagctcaaaccataagaacttcacagttaagtgtgcttgacttgg 23986300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 10927450 - 10927386
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  10927450 aagatgcatcttctttttggtagcccattccataagaactccacagttaaacgtgcttgacttgg 10927386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 10926993 - 10926929
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  10926993 aagatgcatcttccttttggtagtccattccataagaactccacagttaaacgtgcttgacttgg 10926929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 39147038 - 39147102
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  39147038 aagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgacttgg 39147102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 1822005 - 1822069
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  1822005 aagatgcatcttctttttggtagcccattccataagaactccacatttaagcgtgcttgacttgg 1822069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 20039521 - 20039460
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  20039521 aagatgcat-tttcttttggtagcccattccataagaactctacagttaagtgtgcttgactt 20039460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2193915 - 2193979
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2193915 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2193979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2474058 - 2474122
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2474058 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2474122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2474504 - 2474568
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2474504 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2474568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 8642081 - 8642017
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  8642081 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 8642017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 21886193 - 21886129
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||| |||||| ||||||||||||||    
T  21886193 aagatgcatcttcttttcggtagctcattccataagaactccaaagttaagtgtgcttgacttgg 21886129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 27646882 - 27646818
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||| ||||| ||||||||||||||  ||||||| |||||    
T  27646882 aagatgcatcttctttttggtagcccatttcataagaactccacagttaagcgtgcttgtcttgg 27646818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 29680154 - 29680090
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||| ||||| ||||||||||||||  ||| |||||||||    
T  29680154 aagatgcatcttctttttggtagcccattacataagaactccacagttaagcgtgtttgacttgg 29680090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 15513059 - 15512996
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  |||||||| | |||||||||| ||||||||| ||||| ||||||||||||    
T  15513059 aagatgcatcttctttttggtatctcattccataagaactccacaattaaacgtgcttgacttg 15512996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 34371711 - 34371775
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||| ||||||||||  |||||||||||||    
T  34371711 aagatgcatcttcttttcggtagctcattccataagaacaccacagttaagcgtgcttgacttgg 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 34372167 - 34372231
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| |||| |||||||||  |||||||||||||    
T  34372167 aagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttgg 34372231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 42788693 - 42788629
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| ||||||| || ||||||||||||||  |||||||||||||    
T  42788693 aagatgcatcttcttttcggtagctcattccacaagaactccacagttaagcgtgcttgacttgg 42788629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 1821972 - 1822017
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  1821972 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 1822017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 2193882 - 2193927
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  2193882 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 2193927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 3886648 - 3886599
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||    
T  3886648 aagatgcatcttcttttcggtagctcattccataagaactccacagttaa 3886599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 10927026 - 10926981
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  10927026 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 10926981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 10927483 - 10927438
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  10927483 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 10927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 17445535 - 17445490
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  17445535 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 17445490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 34867856 - 34867901
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  34867856 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 34867901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 42788726 - 42788681
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  42788726 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 42788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 189167 - 189231
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||| |||||  ||| |||||| |||||||||| ||||||||||||||   ||||||||||||    
T  189167 aagatgtatcttcttttcggtagctcattccataagaactccacagttaagcatgcttgacttgg 189231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 3887104 - 3887040
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||| | |||||||||| |||| |||||||||  |||||||||||||    
T  3887104 aagatgcatcttcttttcggtaactcattccataagaacttcacagttaagcgtgcttgacttgg 3887040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 8391369 - 8391305
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||||  ||||||||| ||||||| ||||||  |||||||||||||    
T  8391369 aagatgcatcttcttttcggtagctaattccataagaactccatagttaagcgtgcttgacttgg 8391305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 17445502 - 17445438
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  | | |||||| |||||||||| || |||||||||||  |||||||||||||    
T  17445502 aagatgcatcttcttatcggtagctcattccataagaaatccacagttaagcgtgcttgacttgg 17445438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 163193 - 163117
Alignment:
Q  258 gctaccaaaaagaagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||| |||||||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  163193 gctaccgaaaagaagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 163117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 162725 - 162661
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| |||||| |||||||  |||||||||||||    
T  162725 aagatgcatcttcttttcggtagctcattccataagaactccgcagttaagcgtgcttgacttgg 162661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 163158 - 163234
Alignment:
Q  258 gctaccaaaaagaagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||| |||| ||||||||||||  ||| |||||| |||||  ||| || |||||||||||  |||||||||||||    
T  163158 gctaccgaaaacaagatgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtgcttgacttgg 163234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 1645790 - 1645726
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  1645790 aagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgacttgg 1645726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 23943283 - 23943219
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||  |||||||||||||    
T  23943283 aagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgcttgacttgg 23943219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 27029376 - 27029434
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttg 328  Q
    ||||||||||||  ||| ||||||||||||||||| |||||||||||||| ||||||||    
T  27029376 aagatgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttg 27029434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 7678663 - 7678599
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||||  ||||||||| |||||||||||||| ||||||||||||||    
T  7678663 aagatgcatcttcttttcggtagcttattccataagaactccacagttaagtgtgcttgacttgg 7678599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 12692040 - 12691976
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  12692040 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 12691976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 23942830 - 23942766
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||| ||||| |||||||||| ||||||||||||||  |||||||||||||    
T  23942830 aagatgcatcttcttttttgtagcacattccataagaactccacagttaagcgtgcttgacttgg 23942766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 50814866 - 50814802
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  50814866 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 50814802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 53996156 - 53996092
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||| ||||||  |||||||| | |||||||||| |||||||||||||| ||||||||||||||    
T  53996156 aagattcatcttctttttggtatctcattccataagaactccacagttaagtgtgcttgacttgg 53996092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 15306132 - 15306070
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||    
T  15306132 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactt 15306070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 29628694 - 29628645
Alignment:
Q  285 tttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  29628694 tttggtagcccattccataagaactccacagttaagcgtgtttgacttgg 29628645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 3169305 - 3169369
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||| |||| ||||||| ||||||||| ||||  |||||||||||||    
T  3169305 aagatgcatcttctttttggtaacccaatccataagaactccacacttaagcgtgcttgacttgg 3169369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 44471366 - 44471302
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||| ||||    
T  44471366 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttgg 44471302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 49998735 - 49998799
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||| |||||||||    
T  49998735 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttgg 49998799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 50398579 - 50398515
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||| ||||||  |||||||||||||    
T  50398579 aagatgcatcttcttttcggtagctcattccataagaactccatagttaagcgtgcttgacttgg 50398515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 27026602 - 27026664
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||| ||||||||||||||||||||| |||| |  ||||||  ||||||||||||    
T  27026602 aagatgcatcttt-ttttggtagcccattccataagaactacgtagttaagcgtgcttgacttg 27026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 14351894 - 14351956
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  |||||||| || ||||||||| ||||||||||||||  ||| |||||||    
T  14351894 aagatgcatcttctttttggtatcctattccataagaactccacagttaagcgtgtttgactt 14351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 23976229 - 23976195
Alignment:
Q  300 cataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||||||||||| |||||||||||||    
T  23976229 cataaaaactccacagttaaacgtgcttgacttgg 23976195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 35871744 - 35871790
Alignment:
Q  288 ggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  35871744 ggtagctcattccataagaactccacagttaagcgtgcttgacttgg 35871790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 50399032 - 50398970
Alignment:
Q  272 gatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||| |||||||||    
T  50399032 gatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttgg 50398970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 1464213 - 1464258
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  1464213 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 1464258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 4127511 - 4127466
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  4127511 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 4127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 4127963 - 4127918
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  4127963 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 4127918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 7678696 - 7678651
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  7678696 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 7678651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 12692073 - 12692028
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  12692073 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 12692028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 14571795 - 14571750
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  14571795 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 14571750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 14572224 - 14572179
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  14572224 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 14572179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 21067844 - 21067893
Alignment:
Q  284 ttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||| ||||||||||| |||| |||||||||  ||||||||||||    
T  21067844 ttttggtagtccattccataagaacttcacagttaagcgtgcttgacttg 21067893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 21220405 - 21220360
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  21220405 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 21220360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 23942863 - 23942818
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  23942863 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 23942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 24629051 - 24629006
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  24629051 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 24629006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 24629507 - 24629462
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  24629507 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 24629462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 44470948 - 44470903
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  44470948 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 44470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 44471399 - 44471354
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  44471399 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 44471354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 49998702 - 49998747
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  49998702 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 49998747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 50398612 - 50398567
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  50398612 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 50398567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 4185814 - 4185878
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| ||||| | || ||||| |||||||| | ||||||||||||    
T  4185814 aagatgcatcttctttttggtagctcattctacaagaactctacagttaagtatgcttgacttgg 4185878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 24629018 - 24628954
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||  ||||| | |||||||| ||||||||||||||  |||||||||||||    
T  24629018 aagatgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtgcttgacttgg 24628954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 51331322 - 51331258
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||| ||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  51331322 aagatacatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 51331258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25238731 - 25238667
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  25238731 aagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgacttgg 25238667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 50347845 - 50347909
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||  |||||||||||||    
T  50347845 aagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgcttgacttgg 50347909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 25239124 - 25239075
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  25239124 aagatgcatcttctttttggtagcccattccataagaactccacagttaa 25239075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2911194 - 2911258
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  |||||||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2911194 aagatgcatattctttttggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2911258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 4067407 - 4067343
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  4067407 aagatgcatcttctttttggtagctcattacataagaactccacagttaagcgtgcttgacttgg 4067343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 8067379 - 8067443
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||| ||| |||||| |||||||||| ||||||| ||||||  |||||||||||||    
T  8067379 aagatgcatctttttttcggtagctcattccataagaactccatagttaagcgtgcttgacttgg 8067443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 13150601 - 13150537
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  13150601 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 13150537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 25248210 - 25248274
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| |||||||| ||| |  |||||||||||||    
T  25248210 aagatgcatcttctttttggtagcccattccataataactccacggttcagcgtgcttgacttgg 25248274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 28561845 - 28561909
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  28561845 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 28561909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 30529786 - 30529850
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| |||| || ||||||  |||||||||||||    
T  30529786 aagatgcatcttctttttggtagcccattccataagaacttcatagttaagcgtgcttgacttgg 30529850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 31284323 - 31284259
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  31284323 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 31284259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 32227268 - 32227204
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  32227268 aagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 32227204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 39641036 - 39641100
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||  ||| |||||||||    
T  39641036 aagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgtttgacttgg 39641100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 39653263 - 39653327
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||| | |||||||||||||| ||||||||||||||    
T  39653263 aagatgcatcttcttttcggtagctcattccatgagaactccacagttaagtgtgcttgacttgg 39653327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 11180081 - 11180017
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  11180081 aagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 11180017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 13150146 - 13150082
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||  ||||| |||||||||| ||||||||||||||  |||||||||||||    
T  13150146 aagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtgcttgacttgg 13150082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 14814048 - 14814112
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| | |||||||| ||||||||||||||  |||||||||||||    
T  14814048 aagatgcatcttcttttcggtagctcgttccataagaactccacagttaagcgtgcttgacttgg 14814112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 14820253 - 14820317
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| | |||||||| ||||||||||||||  |||||||||||||    
T  14820253 aagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtgcttgacttgg 14820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 16811480 - 16811544
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| || |||||||||||  |||||||||||||    
T  16811480 aagatgcatcttcttttcggtagctcattccataagaattccacagttaagcgtgcttgacttgg 16811544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20885164 - 20885100
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||| ||||| |||||||||| ||||||||| ||||  |||||||||||||    
T  20885164 aagatgcatcttctttttagtagcacattccataagaactccacaattaagcgtgcttgacttgg 20885100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25230295 - 25230231
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||| ||||||  |||||||||||||||| |||| |||||||||||||   |||||||||||||    
T  25230295 aagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtgcttgacttgg 25230231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25230752 - 25230688
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  ||||||||||||||||||||| ||||| ||| ||||  |||||||||||||    
T  25230752 aagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtgcttgacttgg 25230688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25237882 - 25237818
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||| ||||||  |||||||||||||||| |||| |||||||||||||   |||||||||||||    
T  25237882 aagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtgcttgacttgg 25237818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25238339 - 25238275
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  ||||||||||||||||||||| ||||| ||| ||||  |||||||||||||    
T  25238339 aagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtgcttgacttgg 25238275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 32227599 - 32227663
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  32227599 aagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 32227663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 37045138 - 37045198
Alignment:
Q  274 tgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||  |||||||| || ||||||||| ||||||||||||||  |||||||||||||    
T  37045138 tgcatcttctttttggtaccctattccataagaactccacagttaagcgtgcttgacttgg 37045198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 16811024 - 16811087
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||| |||||| |||||||||| |||| |||| |||| |||||||||||||    
T  16811024 aagatgcatcttcttttcggtagctcattccataagaacttcacatttaagtgtgcttgacttg 16811087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 381
Target Start/End: Original strand, 25248175 - 25248222
Alignment:
Q  334 gtttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||||| || |||||||||||||| ||||||| |||||    
T  25248175 gtttataagaattgtttggtactacctatatcaacaagatgcatcttc 25248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 41472399 - 41472462
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||| |||||  |||||||||| |||||||| |||||| ||||||||||||    
T  41472399 aagatgcatcttcttttcggtagatcattccataagaactccacggttaaacgtgcttgacttg 41472462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 25230788 - 25230746
Alignment:
Q  333 ggtttataagaattgttagggactacctatatcaaaaagatgc 375  Q
    ||||||||||||||||| || |||||||||||||| |||||||    
T  25230788 ggtttataagaattgtttggtactacctatatcaacaagatgc 25230746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 25238375 - 25238333
Alignment:
Q  333 ggtttataagaattgttagggactacctatatcaaaaagatgc 375  Q
    ||||||||||||||||| || |||||||||||||| |||||||    
T  25238375 ggtttataagaattgtttggtactacctatatcaacaagatgc 25238333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 27187377 - 27187315
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||    
T  27187377 aagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgactt 27187315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 11180114 - 11180069
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  11180114 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 11180069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 13150634 - 13150589
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  13150634 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 13150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 28561812 - 28561857
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  28561812 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 28561857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 31284356 - 31284311
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  31284356 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 31284311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 32797015 - 32796970
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  32797015 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 32796970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 50347812 - 50347857
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  50347812 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 50347857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 334
Target Start/End: Original strand, 15377419 - 15377447
Alignment:
Q  306 aactccacagttaaatgtgcttgacttgg 334  Q
    |||||||||||||||||||||||||||||    
T  15377419 aactccacagttaaatgtgcttgacttgg 15377447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25802595 - 25802531
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| | ||||||||||||||| || |||||||||||  ||| |||||||||    
T  25802595 aagatgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgtttgacttgg 25802531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 32386781 - 32386717
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||  |||||  ||||||||| ||||||||||||||  |||||||||||||    
T  32386781 aagatgcatcttcttttcagtagctaattccataagaactccacagttaagcgtgcttgacttgg 32386717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 31283698 - 31283636
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  31283698 aagatgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttgactt 31283636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2044157 - 2044221
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  ||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  2044157 aagatgcattttctttttggtagcccattccataataactccacagttaagcgtgcttgacttgg 2044221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 22549042 - 22548978
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||||||||||||||||||  |||||||||||||    
T  22549042 aagatgcatcttcttttcggtagctcattccataaaaactccacagttaagcgtgcttgacttgg 22548978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 6464957 - 6464893
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  |||||||||| |||||||||| ||||||||||||||  |||||||||||||    
T  6464957 aagatgcattttctttttggtagctcattccataacaactccacagttaagcgtgcttgacttgg 6464893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 8080389 - 8080325
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  ||||||||||||||||||||| |||| |||||||||  |||||||||||||    
T  8080389 aagatgcattttctttttggtagcccattccataagaacttcacagttaagcgtgcttgacttgg 8080325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 12827301 - 12827237
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  12827301 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 12827237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 22026478 - 22026542
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  22026478 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 22026542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 22548596 - 22548532
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  22548596 aagatgcatcttcttttcggtagctcattccataataactccacagttaagcgtgcttgacttgg 22548532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 25144871 - 25144935
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  25144871 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 25144935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 28453437 - 28453501
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  || |||||||||||||||||| ||||| ||||||||  |||||||||||||    
T  28453437 aagatgcatcttctttatggtagcccattccataagaactctacagttaagcgtgcttgacttgg 28453501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 32292500 - 32292560
Alignment:
Q  274 tgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||  ||||| ||||||||||||||| ||||||||||||||  |||||||||||||    
T  32292500 tgcatcttctttttgctagcccattccataagaactccacagttaagcgtgcttgacttgg 32292560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 3745203 - 3745262
Alignment:
Q  273 atgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    |||||||||  ||||||||||||||||||||| ||||||||||| ||  |||||||||||    
T  3745203 atgcatcttctttttggtagcccattccataataactccacagtcaagcgtgcttgactt 3745262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 10844662 - 10844599
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||||    
T  10844662 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 10844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 41913069 - 41913132
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||| ||||  ||||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  41913069 aagatgcgtcttctttttggtagcccattccataagaactccgcagttaagcgtgcttgacttg 41913132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 10844982 - 10845043
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgact 331  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||    
T  10844982 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 25147635 - 25147699
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||| ||||||  |||||||||||||    
T  25147635 aagatgcatcttcttttcggtagctcattccataagaactccatagttaatcgtgcttgacttgg 25147699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 27925998 - 27926062
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  27925998 aagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 27926062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 33852305 - 33852241
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||| |||||  ||||||||||||||||||||| |||| |||| ||||  |||||||||||||    
T  33852305 aagatgtatcttctttttggtagcccattccataagaacttcacaattaagcgtgcttgacttgg 33852241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 34308982 - 34308918
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||||| ||||||||| ||||||||||||||  ||||||| |||||    
T  34308982 aagatgcatcttcttttcggtagcctattccataagaactccacagttaagcgtgcttggcttgg 34308918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 15819060 - 15818999
Alignment:
Q  272 gatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||  ||| |||||| |||||||||| ||||| |||||||||| ||||||||||||    
T  15819060 gatgcatcttcttttcggtagcacattccataagaactc-acagttaaatttgcttgacttgg 15818999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 381
Target Start/End: Complemental strand, 22548630 - 22548584
Alignment:
Q  335 tttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    ||||||||||||||| || |||||||||||||| ||||||| |||||    
T  22548630 tttataagaattgtttggtactacctatatcaacaagatgcatcttc 22548584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 25148066 - 25148128
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||| ||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||    
T  25148066 aagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtgcttgactt 25148128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 27819273 - 27819231
Alignment:
Q  290 tagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    |||| ||||||||||||||||||||||||| |||| |||||||    
T  27819273 tagctcattccataaaaactccacagttaagtgtgtttgactt 27819231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 10729710 - 10729771
Alignment:
Q  258 gctaccaaaaagaagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||||||||||||||  |||  ||  |||||||||||| ||||||||| ||||    
T  10729710 gctaccaaaaagaagatgcatcttgttttctgttacccattccataagaactccacaattaa 10729771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 10844949 - 10844994
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  10844949 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 10844994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 12827334 - 12827289
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  12827334 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 12827289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 21316137 - 21316092
Alignment:
Q  289 gtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||| |||| ||||| |||||||||||||| ||||||||||||||    
T  21316137 gtagctcatttcataagaactccacagttaagtgtgcttgacttgg 21316092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 22026445 - 22026490
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  22026445 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 22026490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 22549075 - 22549030
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  22549075 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 22549030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 27022382 - 27022321
Alignment:
Q  273 atgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||||||  ||| || ||| |||||||||| ||||||||||||||  |||||||||||||    
T  27022382 atgcatcttattttcggcagctcattccataagaactccacagttaagcgtgcttgacttgg 27022321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 27925965 - 27926010
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  27925965 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 27926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 41659185 - 41659140
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  41659185 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 41659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 10729738 - 10729670
Alignment:
Q  265 aaaagaagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    |||| ||||||||||||  ||||||||||| |||||||||  |||||||| ||||  ||||||| ||||    
T  10729738 aaaacaagatgcatcttctttttggtagcctattccataaggactccacaattaagggtgcttggcttg 10729670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 12100790 - 12100854
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||| ||||| |||| |||||||||  |||||||||||||    
T  12100790 aagatgcatcttcttttcggtagctcatttcataagaacttcacagttaagcgtgcttgacttgg 12100854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 17103184 - 17103244
Alignment:
Q  274 tgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||  ||| |||||| |||||||||| |||||||| |||||  |||||||||||||    
T  17103184 tgcatcttcttttcggtagctcattccataagaactccacggttaagcgtgcttgacttgg 17103244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 22705238 - 22705282
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttctt 380  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||    
T  22705238 ttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 34308526 - 34308462
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||||| ||||||||| ||||||||| ||||  ||||||| |||||    
T  34308526 aagatgcatcttcttttcggtagcctattccataagaactccacacttaagcgtgcttggcttgg 34308462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 6747645 - 6747583
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  6747645 aagatgcatcttctttttggtagcctattccataaaaactccacagttaagcgtgcttgactt 6747583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 679915 - 679979
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  ||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  679915 aagatgcatattctttttggtagcccattccataagaactccacagttaagcgtgcttgacttgg 679979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 7646502 - 7646578
Alignment:
Q  258 gctaccaaaaagaagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||| |||||||||||||||||  ||| |||| | |||||||||| ||||||||||||||  |||||||||||||    
T  7646502 gctaccgaaaagaagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtgcttgacttgg 7646578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2465832 - 2465896
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2465832 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 2941804 - 2941740
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2941804 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2941740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 13125183 - 13125119
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  13125183 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 13125119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 28495655 - 28495591
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  28495655 aagatgcatcttcttttaggtagctcattccataagaactccacagttaagcgtgcttgacttgg 28495591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 28495953 - 28496017
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  28495953 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 28496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 35474168 - 35474104
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||  ||| |||||||||    
T  35474168 aagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgtttgacttgg 35474104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 42515191 - 42515255
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  |||||||||| |||||||||| ||||||||||||||  |||||||||||||    
T  42515191 aagatgcattttctttttggtagctcattccataagaactccacagttaagcgtgcttgacttgg 42515255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 42515643 - 42515707
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  42515643 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 42515707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 7646535 - 7646461
Alignment:
Q  260 taccaaaaagaagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||| |||| ||||||||||||  ||| |||||| |||||||||| |||| |||||||||  |||||||||||||    
T  7646535 taccgaaaacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttgg 7646461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 34405636 - 34405574
Alignment:
Q  272 gatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  34405636 gatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 34405574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 9125058 - 9125119
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgact 331  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||    
T  9125058 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgact 9125119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 2466027 - 2466087
Alignment:
Q  274 tgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2466027 tgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2466087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 2611699 - 2611635
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||||||||| |||| ||||||| ||||||  |||||| ||||||    
T  2611699 aagatgcatcttctttttggtagcccattctataagaactccatagttaagcgtgctttacttgg 2611635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 6719121 - 6719057
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||| ||||||  |||||||||||||    
T  6719121 aagatgcatcttcttttcggtagctcattccataagaactccagagttaagcgtgcttgacttgg 6719057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 13122552 - 13122488
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||| ||||    
T  13122552 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttgg 13122488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 26421352 - 26421288
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||| ||| ||||| ||||||||||| ||||||||||||||| ||| |||| ||||    
T  26421352 aagatgcatatttttttcggtagtccattccataagaactccacagttaaacgtgtttgaattgg 26421288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 36422351 - 36422415
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  36422351 aagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 36422415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 16192418 - 16192457
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaact 309  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  16192418 aagatgcatcttcgttttggtagcccattccataagaact 16192457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 5406635 - 5406573
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||||||| |||||  |||||| ||||||||||||||  |||||||||||    
T  5406635 aagatgcatcttatttttggttgcccaaaccataagaactccacagttaagcgtgcttgactt 5406573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 43776319 - 43776273
Alignment:
Q  288 ggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  43776319 ggtagctcattccataagaactccacagttaagcgtgcttgacttgg 43776273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 2189210 - 2189255
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  2189210 ttataagaattgtttggcactacctatatcaacaagatgcatcttc 2189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 2193322 - 2193367
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  2193322 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 2193367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 6719154 - 6719109
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  6719154 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 6719109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 6747678 - 6747633
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  6747678 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 6747633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 9125025 - 9125070
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  9125025 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 9125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 36422318 - 36422363
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  36422318 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 36422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2189243 - 2189307
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| | |||| |||| ||||| ||||||||||||||  |||||||||||||    
T  2189243 aagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgcttgacttgg 2189307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 46425840 - 46425904
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||| |  ||||||||| ||||||||||||||  |||||||||||||    
T  46425840 aagatgcatcttcttttcggtatcttattccataagaactccacagttaagcgtgcttgacttgg 46425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 10399 - 10463
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||| ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  10399 aagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 10463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 16379036 - 16379100
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||  |||||||||||||    
T  16379036 aagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgcttgacttgg 16379100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 24818425 - 24818489
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||| ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  24818425 aagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 24818489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 1912624 - 1912687
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  1912624 aagatgcatcttc-ttttggtagcccattccataagaactccacagttaagcgtgattgacttgg 1912687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 8256625 - 8256689
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  8256625 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 8256689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 11388286 - 11388350
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  11388286 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 11388350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 16379492 - 16379556
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||  ||| |||||||||    
T  16379492 aagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgtttgacttgg 16379556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25434103 - 25434039
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||||||||   || |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  25434103 aagatgcatctcctttctggtagcccattccataagaactccacagttaagcgtgcttgacttgg 25434039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 33174602 - 33174666
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||||||||||||||| |||||| |||||||  |||||||||||||    
T  33174602 aagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtgcttgacttgg 33174666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 41754388 - 41754452
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  41754388 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 41754452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 29804781 - 29804844
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||||    
T  29804781 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 29804844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 16542105 - 16542149
Alignment:
Q  290 tagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||    
T  16542105 tagctcattccataaaaactctacagttaaatgtgtttgacttgg 16542149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 30963343 - 30963299
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttctt 380  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||    
T  30963343 ttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 30963767 - 30963703
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  || ||||||||||  |||||| ||||||||||||||  |||||||||||||    
T  30963767 aagatgcatcttctttctggtagcccaaaccataataactccacagttaagcgtgcttgacttgg 30963703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 30966789 - 30966853
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||| ||||||    
T  30966789 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttaacttgg 30966853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 1707140 - 1707203
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||||||||||||||  ||||| ||||||||||||||  ||| ||||||||    
T  1707140 aagatgcatcttctttttggtagcccatctcataagaactccacagttaagagtgtttgacttg 1707203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 1912590 - 1912636
Alignment:
Q  335 tttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    ||||||||||||||| || |||||||||||||| ||||||| |||||    
T  1912590 tttataagaattgtttggtactacctatatcaacaagatgcatcttc 1912636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 30961930 - 30961868
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||| ||| ||| ||||||| |  |||||| ||||||||||||||| |||||||||||    
T  30961930 aagatgcatatttttttcggtagccgaaaccataagaactccacagttaaacgtgcttgactt 30961868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 1707107 - 1707152
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  1707107 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 1707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 5399897 - 5399852
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  5399897 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 5399852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 8256592 - 8256637
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  8256592 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 8256637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 18098925 - 18098876
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||  |||||||||| |||||||||| ||||||| ||||||    
T  18098925 aagatgcatcttctttttggtagctcattccataagaactccatagttaa 18098876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 18098958 - 18098913
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  18098958 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 18098913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 25338077 - 25338032
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  25338077 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 25338032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 29804748 - 29804793
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  29804748 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 29804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 30966300 - 30966345
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  30966300 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 30966345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 30966756 - 30966801
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  30966756 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 30966801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 33174569 - 33174614
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  33174569 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 33174614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 33175024 - 33175069
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  33175024 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 33175069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 33175057 - 33175106
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||  |||||||||| |||| ||||| ||||||||||||||    
T  33175057 aagatgcatcttctttttggtagctcatttcataagaactccacagttaa 33175106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 33771067 - 33771112
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  33771067 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 33771112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 5399864 - 5399800
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| |||| || ||||||  |||||||||||||    
T  5399864 aagatgcatcttcttttcggtagctcattccataagaacttcatagttaagcgtgcttgacttgg 5399800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 25338044 - 25337980
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| | |||| |||| ||||| ||||||||||||||  |||||||||||||    
T  25338044 aagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgcttgacttgg 25337980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 30966333 - 30966397
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||| | |||||||||| ||||||| ||||||  |||||||||||||    
T  30966333 aagatgcatcttcttttcggtatctcattccataagaactccatagttaagcgtgcttgacttgg 30966397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 33771100 - 33771164
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||| ||||| ||||||||||||||   ||||||||||||    
T  33771100 aagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcatgcttgacttgg 33771164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20060387 - 20060323
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| |||||||||||||| ||||||||||||||    
T  20060387 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgcttgacttgg 20060323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 12883623 - 12883686
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||| ||  |||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  12883623 aagatgcattttctttttggtagctcattccataaaaactccacagttaagtgtgtttgacttg 12883686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20054583 - 20054519
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20054583 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20054519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20055039 - 20054975
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20055039 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20054975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20055495 - 20055431
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20055495 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20055431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20055951 - 20055887
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20055951 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20055887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20056407 - 20056343
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20056407 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20057310 - 20057246
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20057310 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20057246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20057766 - 20057702
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20057766 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20057702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20845708 - 20845644
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  20845708 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 20845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 43057570 - 43057506
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| ||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  43057570 aagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgattgacttgg 43057506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 50002332 - 50002268
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| |||||||||||| | ||||||||||||||    
T  50002332 aagatgcatcttcttttcggtagctcattccataagaactccacagttgagtgtgcttgacttgg 50002268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 2328414 - 2328469
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgc 325  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||| ||||    
T  2328414 aagatgcatcttctttttggtagcacattccataagaactccacagttaaaagtgc 2328469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 52250305 - 52250368
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||||    
T  52250305 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 52250368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 52250642 - 52250705
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||||    
T  52250642 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 52250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 52250979 - 52251042
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||||    
T  52250979 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 52251042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 43057112 - 43057050
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||| ||||||||||||||||| ||||||||||||||  ||| |||||||    
T  43057112 aagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgattgactt 43057050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 51372921 - 51372859
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||    
T  51372921 aagatgcatcttattttcggtagctcattccataagaactccacagttaagcgtgcttgactt 51372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 20054127 - 20054066
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgact 331  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||||||||||    
T  20054127 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgact 20054066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 12728091 - 12728155
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||   ||||||||||||    
T  12728091 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcatgcttgacttgg 12728155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 16451980 - 16451916
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||  |||||||||| ||||||||||||||  |||||||||||||    
T  16451980 aagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtgcttgacttgg 16451916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 16461133 - 16461069
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||  |||||||||| ||||||||||||||  |||||||||||||    
T  16461133 aagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtgcttgacttgg 16461069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 20056863 - 20056799
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  ||| |||||||||    
T  20056863 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttgg 20056799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 35759655 - 35759591
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| |||| || ||||||| |||||||||||||    
T  35759655 aagatgcatcttcttttcggtagctcattccataagaacttcatagttaaacgtgcttgacttgg 35759591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 38341005 - 38341069
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| |||| |||||||||  |||||||||||||    
T  38341005 aagatgcatcttcatttcggtagctcattccataagaacttcacagttaagcgtgcttgacttgg 38341069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 38340972 - 38341019
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttcat 383  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||||    
T  38340972 ttataagaattgtttggtactacctatatcaacaagatgcatcttcat 38341019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 8278070 - 8278119
Alignment:
Q  284 ttttggtagcccattccataaaaactccacagttaaatgtgcttgacttg 333  Q
    ||||||||| ||||| |||||| |||||||||||||  ||||||||||||    
T  8278070 ttttggtagtccatttcataaagactccacagttaagcgtgcttgacttg 8278119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 16452013 - 16451968
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  16452013 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 16451968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 16461166 - 16461121
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  16461166 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 16461121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20054160 - 20054115
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20054160 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20054115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20054616 - 20054571
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20054616 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20054571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20055072 - 20055027
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20055072 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20055528 - 20055483
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20055528 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20055483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20055984 - 20055939
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20055984 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20055939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20056440 - 20056395
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20056440 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20056395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20057343 - 20057298
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20057343 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20057298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20057799 - 20057754
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20057799 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20057754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20060420 - 20060375
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20060420 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20060375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 20061238 - 20061189
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||    
T  20061238 aagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 20061271 - 20061226
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  20061271 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 20061226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 35759688 - 35759643
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  35759688 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 35759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 35760994 - 35760949
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  35760994 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 35760949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 50002787 - 50002742
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  50002787 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 50002742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 52250272 - 52250317
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  52250272 ttataagaattgttgggtactacctatatcaacaagatgcatcttc 52250317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 35760961 - 35760897
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||||||||| |||||||| | ||||||  ||||||  |||||||||||||    
T  35760961 aagatgcatcttctttttggtagctcattccatgagaactccgtagttaagcgtgcttgacttgg 35760897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 46693782 - 46693718
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||| | |||| ||||| ||||||||||||||  |||||||||||||    
T  46693782 aagatgcatcttcttttcggtatctcatttcataataactccacagttaagcgtgcttgacttgg 46693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 2098 - 2034
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2098 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 2131 - 2086
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  2131 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 14749 - 14685
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  14749 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 14685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 1319 - 1383
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  1319 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 18181 - 18118
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||| ||||||||||  ||||||||| ||||||||||||||  |||||||||||||    
T  18181 aagatgcatcttt-ttttggtagctaattccataagaactccacagttaagcgtgcttgacttgg 18118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 107510 - 107446
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  107510 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 107446  T

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Target: scaffold0389 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 13580 - 13518
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgactt 332  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||    
T  13580 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactt 13518  T

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Target: scaffold0557 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 2204 - 2253
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaa 319  Q
    ||||||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  2204 aagatgcatcttctttttggtagcccattccttaagaactccacagttaa 2253  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 105822 - 105883
Alignment:
Q  273 atgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    |||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  105822 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 105883  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 2841 - 2905
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||| ||  ||| |||||| |||||||||| ||||||||||||||  |||||||||||||    
T  2841 aagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgg 2905  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 154856 - 154920
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  |||  ||||| |||||||||| ||||||||||||||  |||||||||||||    
T  154856 aagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtgcttgacttgg 154920  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 142356 - 142309
Alignment:
Q  334 gtttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||||| || |||||||||||||| ||||||| |||||    
T  142356 gtttataagaattgtttggtactacctatatcaacaagatgcatcttc 142309  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 23739 - 23784
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  23739 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 23784  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 2290 - 2245
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  2290 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 2245  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 245152 - 245197
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  245152 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 245197  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 245581 - 245626
Alignment:
Q  336 ttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||    
T  245581 ttataagaattgtttggtactacctatatcaacaagatgcatcttc 245626  T

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Target: scaffold0333 (Bit Score: 29; Significance: 0.0000005; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 4624 - 4672
Alignment:
Q  333 ggtttataagaattgttagggactacctatatcaaaaagatgcttcttc 381  Q
    |||||| |||||||||| || |||||||||||||| ||||||| |||||    
T  4624 ggtttagaagaattgtttggtactacctatatcaacaagatgcatcttc 4672  T

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Target: scaffold0333; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 4660 - 4724
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| ||||  |||| |||||||||||||| ||||||| ||||||    
T  4660 aagatgcatcttcttttcggtagctcattttataagaactccacagttaagtgtgcttaacttgg 4724  T

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Target: scaffold0333; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 5120 - 5184
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||||||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||| ||||||    
T  5120 aagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttaacttgg 5184  T

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Target: scaffold0322 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 19065 - 19129
Alignment:
Q  270 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgacttgg 334  Q
    ||||| ||||||  ||| |||||| |||| ||||| ||||||||||||||  |||||||||||||    
T  19065 aagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttgg 19129  T

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