View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1959_low_6 (Length: 225)

Name: NF1959_low_6
Description: NF1959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1959_low_6
NF1959_low_6
[»] scaffold0362 (1 HSPs)
scaffold0362 (5-199)||(5706-5900)
[»] chr8 (38 HSPs)
chr8 (5-199)||(31478377-31478571)
chr8 (5-199)||(25023608-25023805)
chr8 (5-199)||(39319733-39319927)
chr8 (5-199)||(16423129-16423327)
chr8 (9-199)||(27781402-27781597)
chr8 (9-199)||(8271207-8271403)
chr8 (5-197)||(31582000-31582194)
chr8 (5-195)||(28716968-28717161)
chr8 (66-199)||(45141170-45141299)
chr8 (5-119)||(36112493-36112607)
chr8 (9-122)||(39702664-39702777)
chr8 (66-199)||(43276481-43276619)
chr8 (5-177)||(32541543-32541718)
chr8 (67-199)||(6338619-6338752)
chr8 (5-118)||(38171076-38171189)
chr8 (5-199)||(39871558-39871762)
chr8 (66-199)||(31687763-31687899)
chr8 (5-122)||(1893492-1893610)
chr8 (66-198)||(11740817-11740949)
chr8 (5-199)||(42142406-42142594)
chr8 (5-122)||(36681083-36681202)
chr8 (5-119)||(10619200-10619317)
chr8 (136-197)||(44827098-44827159)
chr8 (136-199)||(42203191-42203253)
chr8 (139-199)||(36112635-36112694)
chr8 (136-177)||(1893630-1893671)
chr8 (136-199)||(37587508-37587569)
chr8 (136-199)||(38171214-38171275)
chr8 (5-50)||(6338770-6338815)
chr8 (5-50)||(11740754-11740799)
chr8 (5-50)||(35242917-35242962)
chr8 (140-177)||(39702603-39702640)
chr8 (5-49)||(44827039-44827083)
chr8 (5-44)||(41693635-41693674)
chr8 (136-199)||(10619111-10619176)
chr8 (136-199)||(35243135-35243196)
chr8 (5-50)||(31687700-31687746)
chr8 (144-195)||(36681235-36681288)
[»] chr3 (67 HSPs)
chr3 (5-199)||(8873167-8873360)
chr3 (5-199)||(55304762-55304955)
chr3 (5-199)||(2579580-2579774)
chr3 (5-199)||(4240569-4240757)
chr3 (5-197)||(40479681-40479877)
chr3 (5-199)||(16126800-16126990)
chr3 (67-199)||(19948037-19948168)
chr3 (5-177)||(26541255-26541427)
chr3 (5-199)||(47897252-47897448)
chr3 (5-199)||(39470187-39470379)
chr3 (5-122)||(35499989-35500106)
chr3 (5-122)||(54671828-54671945)
chr3 (5-199)||(37528374-37528568)
chr3 (5-199)||(30864730-30864926)
chr3 (66-199)||(38186073-38186208)
chr3 (5-176)||(28676578-28676752)
chr3 (67-199)||(44845928-44846057)
chr3 (5-193)||(46247579-46247770)
chr3 (5-199)||(38891643-38891840)
chr3 (5-177)||(40563019-40563194)
chr3 (66-199)||(37088585-37088719)
chr3 (5-199)||(45344656-45344859)
chr3 (5-122)||(25570762-25570880)
chr3 (5-122)||(55227441-55227559)
chr3 (66-199)||(43526039-43526175)
chr3 (67-198)||(43740008-43740139)
chr3 (5-122)||(53779416-53779528)
chr3 (9-198)||(54541607-54541798)
chr3 (5-122)||(24536254-24536370)
chr3 (66-197)||(29080994-29081127)
chr3 (5-199)||(37713619-37713813)
chr3 (5-119)||(44545607-44545722)
chr3 (67-175)||(21707453-21707561)
chr3 (66-122)||(50316829-50316885)
chr3 (5-122)||(52795283-52795400)
chr3 (136-199)||(33392206-33392269)
chr3 (5-119)||(21604182-21604297)
chr3 (136-199)||(29717987-29718049)
chr3 (136-199)||(30549040-30549103)
chr3 (136-198)||(50500069-50500130)
chr3 (136-195)||(25570679-25570736)
chr3 (136-199)||(21604097-21604160)
chr3 (136-199)||(44748581-44748644)
chr3 (136-199)||(51003548-51003610)
chr3 (15-119)||(44748454-44748555)
chr3 (136-199)||(54671966-54672031)
chr3 (136-177)||(35499928-35499969)
chr3 (5-50)||(37088741-37088786)
chr3 (5-50)||(52930795-52930840)
chr3 (66-122)||(50500150-50500206)
chr3 (136-199)||(52795200-52795261)
chr3 (136-199)||(44545516-44545583)
chr3 (5-50)||(19947973-19948018)
chr3 (5-50)||(43739945-43739990)
chr3 (5-50)||(44846075-44846120)
chr3 (5-50)||(50316766-50316811)
chr3 (5-49)||(29080934-29080978)
chr3 (5-49)||(29717855-29717899)
chr3 (5-49)||(51003713-51003757)
chr3 (66-120)||(29717915-29717970)
chr3 (136-178)||(49852833-49852875)
chr3 (136-199)||(52930936-52930996)
chr3 (91-122)||(51003630-51003661)
chr3 (5-50)||(43526192-43526236)
chr3 (7-50)||(21707571-21707615)
chr3 (136-195)||(53779337-53779397)
chr3 (136-164)||(55227579-55227607)
[»] chr2 (45 HSPs)
chr2 (5-199)||(38578652-38578844)
chr2 (6-199)||(16487183-16487377)
chr2 (5-199)||(15521775-15521966)
chr2 (5-198)||(28382321-28382520)
chr2 (5-199)||(31616040-31616230)
chr2 (5-198)||(41323057-41323256)
chr2 (5-197)||(36712184-36712374)
chr2 (5-199)||(40024583-40024781)
chr2 (66-199)||(4038057-4038188)
chr2 (66-199)||(21865547-21865679)
chr2 (5-199)||(9887291-9887488)
chr2 (5-199)||(13527556-13527745)
chr2 (5-199)||(650428-650626)
chr2 (66-199)||(8815519-8815650)
chr2 (5-199)||(13111390-13111581)
chr2 (5-177)||(37356494-37356669)
chr2 (5-199)||(24401735-24401935)
chr2 (5-199)||(36999786-36999989)
chr2 (67-176)||(43135934-43136043)
chr2 (66-197)||(4453230-4453361)
chr2 (5-198)||(5040068-5040264)
chr2 (5-177)||(10839218-10839393)
chr2 (5-199)||(17263397-17263598)
chr2 (5-122)||(43507227-43507344)
chr2 (5-122)||(18212492-18212611)
chr2 (5-119)||(3377778-3377892)
chr2 (5-177)||(2265790-2265965)
chr2 (7-122)||(10728518-10728627)
chr2 (136-199)||(6153249-6153312)
chr2 (5-122)||(18710555-18710674)
chr2 (5-119)||(39168135-39168250)
chr2 (139-198)||(39168049-39168107)
chr2 (5-50)||(2546044-2546089)
chr2 (136-177)||(18710494-18710535)
chr2 (5-49)||(15569613-15569657)
chr2 (136-198)||(18212412-18212472)
chr2 (136-199)||(3377691-3377758)
chr2 (136-177)||(4385305-4385346)
chr2 (5-49)||(4453170-4453214)
chr2 (136-197)||(8340279-8340337)
chr2 (136-199)||(13351429-13351488)
chr2 (152-196)||(10728146-10728189)
chr2 (140-195)||(2546110-2546167)
chr2 (5-50)||(21865694-21865740)
chr2 (5-50)||(4037997-4038041)
[»] chr7 (42 HSPs)
chr7 (5-199)||(48831711-48831905)
chr7 (5-198)||(27089309-27089499)
chr7 (5-199)||(21374939-21375133)
chr7 (5-198)||(27188802-27188992)
chr7 (5-198)||(33027175-33027369)
chr7 (5-199)||(42375446-42375642)
chr7 (66-199)||(36436447-36436580)
chr7 (66-199)||(31511598-31511731)
chr7 (9-198)||(10311689-10311883)
chr7 (68-199)||(21744713-21744843)
chr7 (66-199)||(34709539-34709669)
chr7 (66-199)||(47586841-47586972)
chr7 (5-122)||(45686565-45686682)
chr7 (66-198)||(21254412-21254546)
chr7 (9-199)||(9487711-9487906)
chr7 (5-122)||(36246032-36246149)
chr7 (70-177)||(40636874-40636981)
chr7 (66-177)||(45221791-45221905)
chr7 (5-122)||(47586633-47586751)
chr7 (136-199)||(35587880-35587943)
chr7 (5-122)||(43254498-43254614)
chr7 (66-122)||(47586768-47586824)
chr7 (136-199)||(21313585-21313648)
chr7 (5-116)||(42587064-42587177)
chr7 (5-122)||(47470672-47470788)
chr7 (136-199)||(33203459-33203522)
chr7 (74-122)||(33203390-33203438)
chr7 (136-199)||(32169115-32169178)
chr7 (137-199)||(40259149-40259210)
chr7 (5-122)||(35587987-35588104)
chr7 (136-195)||(43254418-43254478)
chr7 (137-177)||(42587171-42587211)
chr7 (138-177)||(36246169-36246208)
chr7 (146-199)||(48591016-48591067)
chr7 (5-46)||(19831728-19831769)
chr7 (5-50)||(40636810-40636855)
chr7 (71-122)||(32169196-32169245)
chr7 (66-109)||(19831791-19831834)
chr7 (5-50)||(21254346-21254392)
chr7 (5-50)||(45221728-45221774)
chr7 (144-195)||(45686715-45686768)
chr7 (5-50)||(21744861-21744908)
[»] chr5 (53 HSPs)
chr5 (5-199)||(32381316-32381509)
chr5 (5-199)||(2179062-2179257)
chr5 (5-199)||(12713615-12713809)
chr5 (5-199)||(4221128-4221320)
chr5 (5-199)||(15443756-15443956)
chr5 (5-199)||(30412244-30412442)
chr5 (66-199)||(30300000-30300132)
chr5 (5-199)||(12363246-12363444)
chr5 (5-197)||(8023627-8023821)
chr5 (5-195)||(2671708-2671903)
chr5 (5-198)||(43402751-43402938)
chr5 (5-177)||(12774865-12775036)
chr5 (5-199)||(13156528-13156726)
chr5 (5-196)||(35235370-35235561)
chr5 (5-122)||(3037049-3037166)
chr5 (5-122)||(16856610-16856727)
chr5 (5-122)||(31168624-31168741)
chr5 (5-122)||(2236153-2236269)
chr5 (5-199)||(36686116-36686306)
chr5 (5-199)||(9586825-9587025)
chr5 (5-119)||(13228189-13228303)
chr5 (5-177)||(24794299-24794474)
chr5 (5-199)||(32383149-32383344)
chr5 (5-122)||(35640326-35640443)
chr5 (5-199)||(6603539-6603741)
chr5 (5-197)||(14647007-14647204)
chr5 (72-199)||(19956010-19956135)
chr5 (5-122)||(29391749-29391865)
chr5 (5-192)||(39275732-39275926)
chr5 (5-119)||(5591989-5592103)
chr5 (9-198)||(15530735-15530929)
chr5 (5-198)||(5997538-5997734)
chr5 (5-199)||(27130634-27130823)
chr5 (137-199)||(7651945-7652006)
chr5 (5-119)||(39744179-39744292)
chr5 (5-117)||(9160319-9160432)
chr5 (136-199)||(9160465-9160529)
chr5 (74-177)||(19526074-19526175)
chr5 (137-199)||(39744317-39744378)
chr5 (66-122)||(1710896-1710952)
chr5 (136-195)||(29391893-29391953)
chr5 (136-199)||(1710976-1711039)
chr5 (136-177)||(3037186-3037227)
chr5 (136-199)||(5591902-5591962)
chr5 (5-50)||(25871954-25871999)
chr5 (138-195)||(2236291-2236346)
chr5 (136-178)||(3669855-3669897)
chr5 (5-46)||(1710832-1710873)
chr5 (5-50)||(19955950-19955995)
chr5 (137-178)||(25872017-25872058)
chr5 (5-50)||(30300150-30300195)
chr5 (136-177)||(31168760-31168801)
chr5 (136-199)||(35640244-35640307)
[»] chr1 (59 HSPs)
chr1 (5-199)||(29586466-29586662)
chr1 (5-198)||(3270966-3271160)
chr1 (5-198)||(15313550-15313749)
chr1 (5-199)||(33524833-33525026)
chr1 (5-199)||(22099222-22099418)
chr1 (5-195)||(26844059-26844252)
chr1 (69-199)||(39826898-39827028)
chr1 (5-198)||(49220117-49220307)
chr1 (66-199)||(13121294-13121423)
chr1 (5-177)||(17499511-17499686)
chr1 (5-199)||(36300740-36300936)
chr1 (66-199)||(44910144-44910275)
chr1 (5-122)||(7710586-7710703)
chr1 (66-197)||(31150124-31150254)
chr1 (5-199)||(39583289-39583483)
chr1 (5-199)||(36838325-36838525)
chr1 (5-122)||(42063941-42064058)
chr1 (5-198)||(50170943-50171127)
chr1 (5-199)||(50351341-50351533)
chr1 (9-199)||(33561541-33561741)
chr1 (5-199)||(1918328-1918526)
chr1 (66-199)||(41150914-41151051)
chr1 (66-199)||(9169351-9169482)
chr1 (5-195)||(19898543-19898741)
chr1 (67-197)||(26204582-26204714)
chr1 (5-122)||(17047117-17047233)
chr1 (5-199)||(38967092-38967297)
chr1 (5-122)||(323254-323370)
chr1 (14-198)||(46370111-46370299)
chr1 (137-199)||(2498226-2498286)
chr1 (136-199)||(17047029-17047094)
chr1 (5-50)||(1507369-1507414)
chr1 (136-177)||(7710723-7710764)
chr1 (5-50)||(23710464-23710509)
chr1 (136-177)||(25602302-25602343)
chr1 (5-50)||(31150059-31150104)
chr1 (137-178)||(47134299-47134340)
chr1 (136-199)||(323169-323233)
chr1 (136-199)||(3661251-3661315)
chr1 (5-49)||(25602436-25602480)
chr1 (147-199)||(30774386-30774437)
chr1 (140-199)||(38676794-38676854)
chr1 (136-199)||(1507511-1507573)
chr1 (5-50)||(2498358-2498403)
chr1 (5-50)||(9169500-9169545)
chr1 (5-50)||(26204732-26204777)
chr1 (5-50)||(38676875-38676920)
chr1 (5-50)||(39827049-39827094)
chr1 (136-199)||(44718767-44718827)
chr1 (5-50)||(13121230-13121274)
chr1 (5-50)||(44718614-44718659)
chr1 (5-50)||(44910294-44910338)
chr1 (136-199)||(18347188-18347249)
chr1 (91-122)||(2498299-2498330)
chr1 (91-122)||(18347136-18347167)
chr1 (91-122)||(44718716-44718747)
chr1 (144-195)||(42064091-42064144)
chr1 (88-122)||(47134254-47134288)
chr1 (5-50)||(18347040-18347085)
[»] chr6 (18 HSPs)
chr6 (5-199)||(34904245-34904437)
chr6 (5-197)||(2442727-2442925)
chr6 (5-197)||(32732062-32732258)
chr6 (5-199)||(6709336-6709540)
chr6 (5-195)||(31451591-31451784)
chr6 (5-177)||(10856455-10856631)
chr6 (66-199)||(34684719-34684855)
chr6 (5-199)||(20805293-20805496)
chr6 (5-122)||(30810798-30810915)
chr6 (5-197)||(34232563-34232753)
chr6 (5-199)||(31099668-31099867)
chr6 (5-177)||(12432314-12432490)
chr6 (5-118)||(12297698-12297810)
chr6 (66-199)||(5943293-5943432)
chr6 (66-122)||(558712-558768)
chr6 (5-50)||(558788-558833)
chr6 (136-177)||(30810935-30810976)
chr6 (5-49)||(5943444-5943488)
[»] chr4 (68 HSPs)
chr4 (5-199)||(4392381-4392573)
chr4 (5-198)||(4939037-4939229)
chr4 (5-199)||(12233625-12233815)
chr4 (5-199)||(42117193-42117388)
chr4 (5-199)||(46895579-46895771)
chr4 (66-198)||(9043337-9043467)
chr4 (66-199)||(33115273-33115406)
chr4 (66-199)||(45780478-45780608)
chr4 (5-199)||(39087211-39087408)
chr4 (5-199)||(9031646-9031838)
chr4 (66-199)||(53274999-53275128)
chr4 (5-122)||(3010091-3010208)
chr4 (5-122)||(21370206-21370323)
chr4 (5-197)||(27185284-27185480)
chr4 (5-198)||(35468314-35468511)
chr4 (5-122)||(52670375-52670492)
chr4 (5-199)||(29664220-29664419)
chr4 (66-199)||(36007730-36007863)
chr4 (5-199)||(25440127-25440326)
chr4 (66-198)||(22038061-22038199)
chr4 (5-199)||(4355236-4355437)
chr4 (67-199)||(8829517-8829654)
chr4 (5-199)||(29413827-29414021)
chr4 (5-199)||(35777044-35777237)
chr4 (9-199)||(11151585-11151783)
chr4 (5-122)||(18583228-18583347)
chr4 (66-177)||(35821965-35822078)
chr4 (5-119)||(37114926-37115041)
chr4 (5-199)||(51010719-51010918)
chr4 (5-199)||(19513530-19513728)
chr4 (9-195)||(27397419-27397610)
chr4 (5-195)||(33004762-33004961)
chr4 (66-198)||(55495595-55495734)
chr4 (5-122)||(45906458-45906575)
chr4 (67-177)||(31679286-31679393)
chr4 (67-199)||(26826816-26826954)
chr4 (5-122)||(56372822-56372941)
chr4 (5-195)||(23867526-23867720)
chr4 (5-122)||(44442460-44442580)
chr4 (136-199)||(15636241-15636304)
chr4 (67-122)||(53407574-53407629)
chr4 (136-199)||(55358121-55358183)
chr4 (5-50)||(43225366-43225411)
chr4 (136-199)||(8942197-8942261)
chr4 (74-196)||(55856257-55856376)
chr4 (137-199)||(47417265-47417328)
chr4 (66-116)||(47417221-47417271)
chr4 (5-50)||(7706849-7706894)
chr4 (5-50)||(8829453-8829498)
chr4 (69-198)||(44442381-44442513)
chr4 (136-199)||(37115067-37115133)
chr4 (136-177)||(3010031-3010072)
chr4 (5-50)||(9043272-9043317)
chr4 (136-177)||(18583168-18583209)
chr4 (5-50)||(26826972-26827017)
chr4 (5-50)||(31953505-31953550)
chr4 (5-50)||(53275148-53275193)
chr4 (136-177)||(56372762-56372803)
chr4 (136-172)||(7706703-7706739)
chr4 (136-199)||(42124443-42124506)
chr4 (138-199)||(52670292-52670351)
chr4 (5-50)||(35821903-35821948)
chr4 (5-50)||(47417159-47417203)
chr4 (5-50)||(55856186-55856231)
chr4 (67-103)||(7706796-7706832)
chr4 (5-50)||(22037998-22038044)
chr4 (9-47)||(55495536-55495574)
chr4 (5-41)||(25198947-25198983)
[»] scaffold0246 (2 HSPs)
scaffold0246 (66-199)||(7360-7492)
scaffold0246 (5-50)||(7509-7554)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-122)||(431646-431763)
scaffold0002 (136-197)||(431558-431621)
[»] scaffold0027 (2 HSPs)
scaffold0027 (5-122)||(41404-41523)
scaffold0027 (144-195)||(41556-41609)
[»] scaffold0122 (1 HSPs)
scaffold0122 (5-198)||(12367-12567)
[»] scaffold0197 (4 HSPs)
scaffold0197 (136-196)||(27858-27917)
scaffold0197 (67-109)||(28740-28782)
scaffold0197 (149-199)||(29979-30029)
scaffold0197 (5-50)||(28679-28724)
[»] scaffold1526 (1 HSPs)
scaffold1526 (5-50)||(1641-1686)


Alignment Details
Target: scaffold0362 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 5900 - 5706
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  5900 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 5801  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  5800 gaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcggaaaaaaaaaaacgaaggtatatattttttc 5706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 31478571 - 31478377
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  31478571 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 31478472  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||| |||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  31478471 gaaaataacatttacctcagaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 31478377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 25023805 - 25023608
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  25023805 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 25023706  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn---gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||                |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  25023705 gaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 25023608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 39319733 - 39319927
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  39319733 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaataaaaataaaaagtagcactaatagagtaatactaataacagagaataa 39319832  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||             |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  39319833 agaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataataatattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 39319927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 16423327 - 16423129
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  16423327 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 16423228  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  16423227 gaaaataacacttacccaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 16423129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 27781597 - 27781402
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||               |||||||||||||||||||||||||||||||||||||||||||    
T  27781597 atttaagtgtttctactttataaagaaaataacatttacatcaaaaacaaaaaaaaaggtagcactaatagagtaatattaataacagagaataaagaaa 27781498  T
Q  109 ataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  27781497 ataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 27781402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 8271403 - 8271207
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| ||||||| |||||||||||||    
T  8271403 atttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacggagaataaagaaa 8271304  T
Q  109 ataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||                   ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  8271303 ataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttagtaaaaaaaaaaacgaaggtatatattttttc 8271207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 31582194 - 31582000
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  31582194 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 31582096  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||||                |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  31582095 gaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaatgaaggtatatattttt 31582000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 195
Target Start/End: Complemental strand, 28717161 - 28716968
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||    
T  28717161 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatattaataacagagaataa 28717062  T
Q  104 agaaaataacacttacctc----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    |||||||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  28717061 agaaaataacacttacctcaaaaaaataaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattt 28716968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 45141170 - 45141299
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  45141170 ggtagcaataatagagtaataataataacagagaataaagaaaataacacttacctc--aaaaaaaaaaagtaacactaatagaataatagtattttgtt 45141267  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||  |||||||| ||||||||||||    
T  45141268 tcgtaaaaaaa--aacgaaggtatatattttttc 45141299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 36112493 - 36112607
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||| ||||||    
T  36112493 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaataaaaaaaaaggtagcactaatagagtaatattaataacagataataaa 36112592  T
Q  105 gaaaataacacttac 119  Q
    |||||||||||||||    
T  36112593 gaaaataacacttac 36112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 39702777 - 39702664
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||               |||||||||||||||||||||||||||||||||||||||||||    
T  39702777 atttaagtgtttctactttataaagaaaataacatttacatcaaaaacaaaaaaaaaggtagcactaatagagtaatattaataacagagaataaagaaa 39702678  T
Q  109 ataacacttacctc 122  Q
    ||||||||||||||    
T  39702677 ataacacttacctc 39702664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 43276481 - 43276619
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc---nnnnnnnnnnnnngtaacactaat--agaataatagtatt 160  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||                |||||||||||  ||||||||||||||    
T  43276481 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagagaataatagtatt 43276580  T
Q  161 ttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  43276581 ttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 43276619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 32541718 - 32541543
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  32541718 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 32541619  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||                ||||||||||||||| ||||||||||||||||||||||||||    
T  32541618 gaaaataacacttacctcaaaaaaaataaaaaaagtaacactaatagaacaatagtattttgtttcgtaaaaaaaa 32541543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 6338752 - 6338619
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn--gtaacactaatagaataatagtattttgt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||               |||||||||||||||||||| ||||||||    
T  6338752 gtagcactaatagagtaataataataacagagaataaagaaaataacacttatctcaaaaaaaaaaaaaaagtaacactaatagaataataatattttgt 6338653  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||| |||||||| ||||||||||||    
T  6338652 ttcgtaaaaaaaa-aacgaaggtatatattttttc 6338619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 38171076 - 38171189
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               |||||||||||||||||||||||||||| ||||||||||    
T  38171076 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatattaataagagagaataaa 38171175  T
Q  105 gaaaataacactta 118  Q
    ||||||||||||||    
T  38171176 gaaaataacactta 38171189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 39871762 - 39871558
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  39871762 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaatgtagcactaatagagtaatactaataacagagaataa 39871663  T
Q  104 agaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt---aaaaaaaacaacgaaggaatatatt 194  Q
    |||||||||||||||||||                   ||||||||||||||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  39871662 agaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaaaacgaaggtatatatt 39871563  T
Q  195 ttttc 199  Q
    |||||    
T  39871562 ttttc 39871558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 31687763 - 31687899
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn--gtaacactaatagaataatagtattttg 163  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||               ||||||||||||||||||||||||||||    
T  31687763 ggtagcactaatagagtaatactaataacagagaagaaagaaaataacaattacctcaaaaaaaaaaaaaaagtaacactaatagaataatagtattttg 31687862  T
Q  164 tttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||| |||||||| |||||||| ||||||||||||    
T  31687863 tttcgtaaaaaaaaaaaacgaaggtatatattttttc 31687899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1893492 - 1893610
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  1893492 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacataaaaaaaaagtagcactaatagagtaatactaataacagagaataa 1893591  T
Q  104 agaaaataacacttacctc 122  Q
    |||||||||||||||||||    
T  1893592 agaaaataacacttacctc 1893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 11740817 - 11740949
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacct--cnnnnnnnnnnnnngtaacactaatagaataatagtattttg 163  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||                ||||||||||||||||||||||||||||    
T  11740817 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctacaaaaaaaaaaaaaagtaacactaatagaataatagtattttg 11740916  T
Q  164 tttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||  |||||||| |||| ||||||    
T  11740917 tttcgtaaaaaaa--aacgaaggtatatttttttt 11740949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 42142406 - 42142594
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                |||| |||||||||||||||| ||||||||||||||||    
T  42142406 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtaacactaatagagtaatactaataacagagaataa 42142505  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||| |||||||||||||              ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  42142506 agaaa-taacacttacctcaaaaaaaaaa----taacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 42142594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 36681083 - 36681202
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||| |||||| ||||||||    
T  36681083 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaggtagcactaatagagtaatactaataatagagaata 36681182  T
Q  103 aagaaaataacacttacctc 122  Q
    ||||||||||||||||||||    
T  36681183 aagaaaataacacttacctc 36681202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 10619317 - 10619200
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn---ggtagcactaatagagtaatattaataacagagaat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||||||||| ||||||||||||||    
T  10619317 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaat 10619218  T
Q  102 aaagaaaataacacttac 119  Q
    ||||||||||||||||||    
T  10619217 aaagaaaataacacttac 10619200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 44827098 - 44827159
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  44827098 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaatgaaggtatatattttt 44827159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 42203191 - 42203253
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  42203191 gtaacactaatagagtaatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 42203253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 36112635 - 36112694
Alignment:
Q  139 acactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  36112635 acactaatagaataatagtattttgttccgtaaaaaaaa-aacgaaggtatatattttttc 36112694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 1893630 - 1893671
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1893630 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 1893671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 37587508 - 37587569
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||| ||||||||||||||||||||  |||||||| ||||||||||||    
T  37587508 gtaacactaatagagtaataatattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 37587569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 38171214 - 38171275
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||| ||||| |||||||||||||||||||||  |||||||| ||||||||||||    
T  38171214 gtaacactaataggataatggtattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 38171275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 6338815 - 6338770
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  6338815 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 6338770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 11740754 - 11740799
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  11740754 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 11740799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 35242917 - 35242962
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  35242917 tatcatttaagtgtttccactttataaagaaaataacacttacctc 35242962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 39702640 - 39702603
Alignment:
Q  140 cactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39702640 cactaatagaataatagtattttgtttcgtaaaaaaaa 39702603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 44827039 - 44827083
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||    
T  44827039 tatcatttaagtgtttccactttataaaaaaaataacatttacct 44827083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 41693635 - 41693674
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatt 44  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  41693635 tatcatttaagtgtttccactttataaagaaaataacatt 41693674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 10619176 - 10619111
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||||  ||  |||||||| || ||||| ||||||||||||    
T  10619176 gtaacactaatagaataatagtattttgttctgtaaaaaaaaaaaaatgaaggtatatattttttc 10619111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 35243135 - 35243196
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||| |||||||| ||||||||||||||| ||| ||||||  |||||||| ||||||||||||    
T  35243135 gtaacgctaatagagtaatagtattttgttccgttaaaaaa--aacgaaggtatatattttttc 35243196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 31687700 - 31687746
Alignment:
Q  5 tatcatttaagtgtttctactttat-aaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  31687700 tatcatttaagtgtttccactttataaaaaaaaataacatttacctc 31687746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 36681235 - 36681288
Alignment:
Q  144 aatagaataatagtattttgtttcgtaaaaaaaa--caacgaaggaatatattt 195  Q
    ||||||||||||||||| ||||||||||||||||   |||||||| ||||||||    
T  36681235 aatagaataatagtattctgtttcgtaaaaaaaaataaacgaaggtatatattt 36681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 8873360 - 8873167
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  8873360 tatcatttaagtgtttctacttgataaagaaaataacatttacctcgaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 8873261  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  8873260 gaaaataacacttacctaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 8873167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 55304762 - 55304955
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  55304762 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 55304861  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||| ||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  55304862 gaaaataacccttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 55304955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 2579580 - 2579774
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  2579580 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 2579679  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             | |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  2579680 gaaaataacacttacctcaaaaaaaaaaaaaggaacattaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 2579774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 4240757 - 4240569
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               | ||||||||||||||||||| |||||||||||||||||    
T  4240757 tatcatttaagtgtttccactttataaagaaaataacatttacctcaacaacaaaaaaaaagttagcactaatagagtaatactaataacagagaataaa 4240658  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||                |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  4240657 gaaaataacacttacctaaaaaaaaaa------aacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 4240569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 40479681 - 40479877
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  40479681 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 40479780  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  40479781 gaaaataacacttacccaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttt 40479877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 16126800 - 16126990
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  16126800 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 16126899  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||| ||             |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  16126900 gaaaataacacttacttc--aaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 16126990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 19948037 - 19948168
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgttt 166  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||             |||||||||||||||||||| ||||||||||    
T  19948037 gtagcactaatagagtaataataataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataataatattttgttt 19948136  T
Q  167 cgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||| |||||||| ||||||||||||    
T  19948137 cgtaaaaaaaa-aacgaaggtatatattttttc 19948168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 26541427 - 26541255
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||                ||||||||||||||||||||| |||||||||||||||||    
T  26541427 tatcatttaagtgtttccactttataaaaaaaataacatttaccttaaaaaccaaaaaaatggtagcactaatagagtaatactaataacagagaataaa 26541328  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||    
T  26541327 gaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa 26541255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 47897252 - 47897448
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                ||||||||||||||||||||| ||| ||||||||||||    
T  47897252 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaacaacagagaataa 47897351  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||             |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  47897352 agaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 47897448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 39470379 - 39470187
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  39470379 tatcatttaagtgtttctactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 39470280  T
Q  105 gaaaa-taacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
     |||| |||||||||||||             ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  39470279 aaaaaataacacttacctcaaaaaaaaaaa--gtaacacaaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 39470187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 35500106 - 35499989
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  35500106 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 35500007  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  35500006 gaaaataacacttacctc 35499989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 54671828 - 54671945
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||    
T  54671828 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaatgtagcactaatagagtaatattaataacagagaataaa 54671927  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  54671928 gaaaataacacttacctc 54671945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 37528374 - 37528568
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||                |||||||||||||||||||| |||||||||||||||||    
T  37528374 tatcatttaagtgttaccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaacgtagcactaatagagtaatactaataacagagaataaa 37528473  T
Q  105 gaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||              ||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  37528474 gaaaataacacttacctcaaaaaaaaaaaaaagtaacgctaatagaataataatattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 37528568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 30864926 - 30864730
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  30864926 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaa---ggtagcactaatagagtaatactaataacagagaataaa 30864830  T
Q  105 gaaaataacacttacctc-----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
     |||||||||||||||||                  |||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  30864829 aaaaataacacttacctcaaaaaaataaaataaaaagtaatactaatagaataatagtattttgttccgtaaaaaaaaaaacgaaggtatatattttttc 30864730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 38186208 - 38186073
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn--gtaacactaatagaataatagtattttg 163  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||               |||||||||||||||||||| |||||||    
T  38186208 ggtagcactactagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaaagtaacactaatagaataataatattttg 38186109  T
Q  164 tttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| |||||||| ||||||||||||    
T  38186108 tttcgtaaaaaaaaaaacgaaggtatatattttttc 38186073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 28676578 - 28676752
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                 ||||||||||||||||||||| |||||||||||||||    
T  28676578 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaata 28676677  T
Q  103 aagaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaa 176  Q
    ||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||    
T  28676678 aagaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa 28676752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 44846057 - 44845928
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgttt 166  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||             |||||||||||||||||||| |||||||||     
T  44846057 gtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataataatattttgtta 44845958  T
Q  167 cgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||   |||||||| ||||||||||||    
T  44845957 cgtaaaaaa---aacgaaggtatatattttttc 44845928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 193
Target Start/End: Original strand, 46247579 - 46247770
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  46247579 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 46247678  T
Q  105 gaaaataacacttacctc-----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatat 193  Q
    ||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  46247679 gaaaataacacttacctcaaaaaaataaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatat 46247770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 38891643 - 38891840
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  38891643 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 38891742  T
Q  105 gaaaataacacttacct----cnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||| ||||||                  ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  38891743 gaaaataacatttacctaaaaaaaaaaaaaaaaaggtaacactaatagaataatagtattttgtttcgtaaagaaaa-aacgaaggtatatattttttc 38891840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 40563019 - 40563194
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  40563019 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 40563118  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||                ||||||||||||||| ||||||||||||||||||||||||||    
T  40563119 gaaaataacacttacctcaaaaaaaataaaaaaagtaacactaatagaacaatagtattttgtttcgtaaaaaaaa 40563194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 37088719 - 37088585
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtatttt 162  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||    
T  37088719 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtatttt 37088620  T
Q  163 gtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||  ||| |||| ||||||||||||    
T  37088619 gtttcgtaaaaaaa--aacaaaggtatatattttttc 37088585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 45344656 - 45344859
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||               ||||||||||||||||||||| |||||||||||||||||    
T  45344656 tatcatttaagtgtttctactttataaagaaaataacatttatctcaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 45344755  T
Q  105 gaaaataaca----cttacctcnnnnnnnnnnnnn-----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||    ||||||||                  |||||||||||||||||||||||||||||| ||||||||||| |||||| | ||||||||    
T  45344756 gaaaataacaattacttacctcaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgttccgtaaaaaaaaaaacgaatgtatatattt 45344855  T
Q  196 tttc 199  Q
    ||||    
T  45344856 tttc 45344859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 25570880 - 25570762
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| |||||| |||||||||    
T  25570880 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataatagagaataa 25570781  T
Q  104 agaaaataacacttacctc 122  Q
    |||||||||||||||||||    
T  25570780 agaaaataacacttacctc 25570762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 55227441 - 55227559
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  55227441 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaaagtagcactaatagagtaatactaataacagagaataa 55227540  T
Q  104 agaaaataacacttacctc 122  Q
    |||||||||||||||||||    
T  55227541 agaaaataacacttacctc 55227559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 43526175 - 43526039
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc-----nnnnnnnnnnnnngtaacactaatagaataatagtatt 160  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||    
T  43526175 ggtagcgctaatagagtaatattaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtatt 43526076  T
Q  161 ttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||| ||||||||  |||||||| ||||||||||||    
T  43526075 ttgtttcataaaaaaa--aacgaaggtatatattttttc 43526039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 43740008 - 43740139
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc--nnnnnnnnnnnnngtaacactaatagaataatagtattttgt 164  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||                ||||||||||||||||||| ||||||||    
T  43740008 gtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaataaataacactaatagaataataatattttgt 43740107  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||  |||||||| |||||||||||    
T  43740108 ttcgtaaaaaaa--aacgaaggtatatatttttt 43740139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 53779528 - 53779416
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||||                |||||||||||||||||||| |||||||||||||||||    
T  53779528 tatcatttaagtgtttctactttataaaaaaaataacatttacctcaaaaaaaaaaa-----gtagcactaatagagtaatactaataacagagaataaa 53779434  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  53779433 gaaaataacacttacctc 53779416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 54541607 - 54541798
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||| |||||||||||||||||||||||| |||               |||||||||||||||||||||  ||||||| ||||||||||||    
T  54541607 atttaagtgtttccactttataaagaaaataacatttatctcaaaaacaaaaaaaaaggtagcactaatagagtaatacgaataacaaagaataaagaaa 54541706  T
Q  109 ataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||| |              |||||||| |||||||||||||||||||||||||  |||||||| |||||||| |||||||||||    
T  54541707 ataacacttacataaaaaaaaaaaaaagtaacacttatagaataatagtattttgtttcgtaaaaaaaaaaaaacgaaggtatatatttttt 54541798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 24536254 - 24536370
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  24536254 tatcatttaaatgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 24536352  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  24536353 gaaaataacacttacctc 24536370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 29080994 - 29081127
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaa-taacacttacctcnnnnnnnnnnnnn-gtaacactaatagaataatagtattttg 163  Q
    |||||||| |||||||||||| ||||||||||||||||| |||| |||||||||||||              ||||||||||||||||||||||||||||    
T  29080994 ggtagcaccaatagagtaatactaataacagagaataaaaaaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttg 29081093  T
Q  164 tttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    |||||||||||||| || ||||| ||||||||||    
T  29081094 tttcgtaaaaaaaaaaatgaaggtatatattttt 29081127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 37713619 - 37713813
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| |||||||||||||||||    
T  37713619 tatcatttaagtgtttctactttataaagaaaataacatttacctaaaaaaaaaaaat----gtagcactaatagagtaatactaataacagagaataaa 37713714  T
Q  105 gaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||| |||||||                   |||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  37713715 gaaaataacatttacctcaaaaaaataaaaataaaaagtaacattaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatatttttt 37713812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 44545722 - 44545607
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                |||| |||||||||||||||| ||||||||||||||||    
T  44545722 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtaacactaatagagtaatactaataacagagaataa 44545623  T
Q  104 agaaaataacacttac 119  Q
    ||||||||||||||||    
T  44545622 agaaaataacacttac 44545607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 21707561 - 21707453
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgttt 166  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||    
T  21707561 gtagcactaatagagtaatactaataatagagaataaagaaaataacacttacctcaaaaaaaaaaaaaaaaacactaatagaataatagtattttgttt 21707462  T
Q  167 cgtaaaaaa 175  Q
    |||||||||    
T  21707461 cgtaaaaaa 21707453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 50316829 - 50316885
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50316829 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctc 50316885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 52795400 - 52795283
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||||||||||||||||||||                 ||| |||||||||||||||| |||||||||||||||||    
T  52795400 tatcatttaagtgtttccactttataaagaaaataacatttacctaaaaaacaaaaaaaaaagtaacactaatagagtaatactaataacagagaataaa 52795301  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  52795300 gaaaataacacttacctc 52795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 33392269 - 33392206
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  33392269 gtaacactaatagagtaatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 33392206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 21604297 - 21604182
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc-nnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||| ||||||| ||||||||||||||||    
T  21604297 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaatgtagcactaataaagtaatactaataacagagaataa 21604198  T
Q  104 agaaaataacacttac 119  Q
    ||||||||||||||||    
T  21604197 agaaaataacacttac 21604182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 29717987 - 29718049
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  29717987 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatataatttttc 29718049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 30549103 - 30549040
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  30549103 gtaacactaatagagtaatagtattttgtttcgttaaaaaaaaaacgaaggtatatattttttc 30549040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 50500130 - 50500069
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||    
T  50500130 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aatgaaggtatatatttttt 50500069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 25570736 - 25570679
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  25570736 gtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattt 25570679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 21604160 - 21604097
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||||  ||||||||||||    
T  21604160 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaagtgaagttatatattttttc 21604097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 44748581 - 44748644
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||    
T  44748581 gtaatactaatagaataatagtattttgttccgtaaaaaaaaaaacaaaggtatatattttttc 44748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 51003610 - 51003548
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  51003610 gtaacactaatagagtaatagtattttgttccgtaaaaaaaa-aacgaaggtatatattttttc 51003548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 44748454 - 44748555
Alignment:
Q  15 gtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaaataaca 114  Q
    ||||||||||||||||||||||||||||||||||||               ||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  44748454 gtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaa---ggtagcattaataaagtaatactaataacagagaataaagaaaataaca 44748550  T
Q  115 cttac 119  Q
    |||||    
T  44748551 cttac 44748555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 54671966 - 54672031
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||    
T  54671966 gtaacactaatagaataatagtattttgttttgtaaaaaaaaaaaaacgaaggtatatattttttc 54672031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 35499969 - 35499928
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35499969 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 35499928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 37088786 - 37088741
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  37088786 tatcatttaagtgtttctactttataaaggaaataacatttacctc 37088741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 52930795 - 52930840
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  52930795 tatcatttaagtgtttccactttataaagaaaataacatttacctc 52930840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 50500206 - 50500150
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||    
T  50500206 ggtagcactaatagagtaatactaatacaaaagaataaagaaaataacacttacctc 50500150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 52795261 - 52795200
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  52795261 gtaacactaatagagtaatagtattttgtttcgtaaaaaaaa-aacg-aggtatatattttttc 52795200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 44545583 - 44545516
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa----aaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||| |||||||    |||| |||||||| ||||||||||||    
T  44545583 gtaacactaatagaataatagtattttgttccgtaaaaaaaaaaaaaaacgaaggtatatattttttc 44545516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 19947973 - 19948018
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  19947973 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 19948018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 43739945 - 43739990
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  43739945 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 43739990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 44846120 - 44846075
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  44846120 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 44846075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 50316766 - 50316811
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  50316766 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 50316811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 29080934 - 29080978
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||    
T  29080934 tatcatttaagtgtttccactttataaaaaaaataacatttacct 29080978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 29717855 - 29717899
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||    
T  29717855 tatcatttaagtgtttccactttataaaaaaaataacatttacct 29717899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 51003757 - 51003713
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  51003757 tatcatttaagtgtttccactttataaagaaaataacacttacct 51003713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 29717915 - 29717970
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaat-aaagaaaataacacttacc 120  Q
    |||||||| |||||||||||| |||||||||||||| ||| |||||||||||||||    
T  29717915 ggtagcaccaatagagtaatactaataacagagaataaaaaaaaataacacttacc 29717970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 49852833 - 49852875
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaac 178  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  49852833 gtaacactaataaagtaatagtattttgtttcgtaaaaaaaac 49852875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 52930936 - 52930996
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||| ||||| |||||||||||   |||||||| ||||||||||||    
T  52930936 gtaacactaatagattaatagttttttggttcgtaaaaaa---aacgaaggtatatattttttc 52930996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 122
Target Start/End: Complemental strand, 51003661 - 51003630
Alignment:
Q  91 taacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||||||||||||||    
T  51003661 taacagagaataaagaaaataacacttacctc 51003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 43526236 - 43526192
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||    
T  43526236 tatcatttaagtgttttcactttataaa-aaaataacatttacctc 43526192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 21707615 - 21707571
Alignment:
Q  7 tcatttaagtgtttctactttat-aaagaaaataacatttacctc 50  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||    
T  21707615 tcatttaagtgtttccactttataaaaaaaaataacatttacctc 21707571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 53779397 - 53779337
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa-aaaacaacgaaggaatatattt 195  Q
    ||||||| | ||||||||||||||||| || ||||||| |||| |||||||| ||||||||    
T  53779397 gtaacaccagtagaataatagtattttattccgtaaaaaaaaaaaacgaaggtatatattt 53779337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 55227579 - 55227607
Alignment:
Q  136 gtaacactaatagaataatagtattttgt 164  Q
    |||||||||||||||||||||||||||||    
T  55227579 gtaacactaatagaataatagtattttgt 55227607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 38578652 - 38578844
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  38578652 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 38578751  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  38578752 gaaaataacacttacctcaaaaaaaaaaa--gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 38578844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 16487377 - 16487183
Alignment:
Q  6 atcatttaagtgtttctactttataaagaaaataacatttacctc-nnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||| |||||||||| |||||||||||||||||                ||||||||||||||||||||| |||||||||||||||||    
T  16487377 atcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 16487278  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  16487277 gaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaataaaaaacgaaggtatatattttttc 16487183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 15521966 - 15521775
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||| |||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  15521966 tatcatttaagtgtttgtactttataaagaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaataataataacagagaataaa 15521868  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  15521867 gaaaataacacttacctc-aaaaaaaaaaaagtaacactaatagaataatagtattttgttttgtaaaaaaaa-aacgaaggtatatattttttc 15521775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 28382321 - 28382520
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  28382321 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 28382420  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28382421 gaaaataacacttacctcaaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatatttttt 28382520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 31616040 - 31616230
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||| ||||| ||||||| |||||||||||||||||    
T  31616040 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaa-ggtagcaataataaagtaatactaataacagagaataaa 31616138  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  31616139 gaaaataacacttacctcaaaaaaaaaa---gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 31616230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 41323256 - 41323057
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  41323256 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 41323157  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  41323156 gaaaataacacttacctcaaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatatttttt 41323057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 36712184 - 36712374
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  36712184 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 36712282  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  36712283 gaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aatgaaggtatatattttt 36712374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 40024583 - 40024781
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  40024583 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 40024682  T
Q  104 agaaaataacacttacctc--nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||               |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  40024683 agaaaataacacttacctcaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 40024781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 4038057 - 4038188
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||    
T  4038057 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaa--taacactaatagaataatagtattttgtt 4038154  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| ||| |||| ||||||||||||    
T  4038155 tcgtaaaaaaaaaaacaaaggtatatattttttc 4038188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 21865679 - 21865547
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  21865679 ggtagcaccaatagagtaatactaataatagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtt 21865580  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| |||||||| ||||||||||||    
T  21865579 tcgtaaaaaaaa-aacgaaggtatatattttttc 21865547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 9887488 - 9887291
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                |||||||||||||||||||| |||||||||||||||||    
T  9887488 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaatgtagcactaatagagtaatactaataacagagaataaa 9887389  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  9887388 gaaaataacacttacctcaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 9887291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 13527556 - 13527745
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  13527556 tatcatttaagtgttttcactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 13527655  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  13527656 gaaaataacacttacctcaaaaaaaaaaaa---aacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 13527745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 650428 - 650626
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  650428 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 650527  T
Q  104 agaaaataacacttacctc--nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||               |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  650528 agaaaataacacttacctcaaaataaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 650626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 8815650 - 8815519
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||              ||||| |||||||||||||||||||||||    
T  8815650 ggtagcactaatagagtaataataataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaa-taacattaatagaataatagtattttgtt 8815552  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| |||||||| ||||||||||||    
T  8815551 tcgtaaaaaaaa-aacgaaggtatatattttttc 8815519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 13111390 - 13111581
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||| ||||||||    
T  13111390 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataacaaagaataaa 13111488  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||              |||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  13111489 gaaaataacacttacct-aaaaaaaaaaaaagtaacattaatagaataataatattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 13111581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 37356669 - 37356494
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  37356669 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 37356570  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||||||    
T  37356569 gaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa 37356494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 24401735 - 24401935
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  24401735 tatcattcaagtgtttctaccttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 24401834  T
Q  105 gaaaataacacttacct-----cnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||||||                   |||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  24401835 gaaaataacacttaccttaaaaaaataaaaaataaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatatttttt 24401934  T
Q  199 c 199  Q
    |    
T  24401935 c 24401935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 36999989 - 36999786
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| ||||| |||||||||||    
T  36999989 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaatagcagagaataaa 36999890  T
Q  105 gaaaataacactta----cctcnnnnnnnnnnnnn-----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||||||    ||||                  |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  36999889 gaaaataacacttacttacctcaaaaaaattaaaaaaaaagtaacactaatagaataatagtattttgttccgtaaaaaaaaaaacgaaggtatatattt 36999790  T
Q  196 tttc 199  Q
    ||||    
T  36999789 tttc 36999786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 43136043 - 43135934
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgttt 166  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||             |||||||||||||||||||| ||||||||||    
T  43136043 gtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataataatattttgttt 43135944  T
Q  167 cgtaaaaaaa 176  Q
    ||||||||||    
T  43135943 cgtaaaaaaa 43135934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 4453230 - 4453361
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaa-taacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgt 164  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||             |||||||||||||||||||||||||||||    
T  4453230 ggtagcactaatagagtaatactaataacagagaataaaaaaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgt 4453329  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||| || ||||| ||||||||||    
T  4453330 ttcgtaaaaaaaa-aatgaaggtatatattttt 4453361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 5040264 - 5040068
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  5040264 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaataataataacagagaataaa 5040165  T
Q  105 gaaaataacacttacc--tcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||| |                 |||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||    
T  5040164 gaaaataacacttatcaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatttttttt 5040068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 10839218 - 10839393
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||  ||||||||||||||||| |||||||||||||||||    
T  10839218 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaagggggcactaatagagtaatactaataacagagaataaa 10839317  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||||||    
T  10839318 gaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa 10839393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 17263397 - 17263598
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| |||||||||||||| |    
T  17263397 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaatta 17263496  T
Q  104 agaaaataacacttacctc----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatattttt 197  Q
    |||||||||||||||||||                 ||||||||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||    
T  17263497 agaaaataacacttacctcaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgttttgtaaaaaaaaaaaaacgaaggtatatattttt 17263596  T
Q  198 tc 199  Q
    ||    
T  17263597 tc 17263598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 43507227 - 43507344
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||| ||| |||||||||||||||||    
T  43507227 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtcatactaataacagagaataaa 43507326  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  43507327 gaaaataacacttacctc 43507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 18212611 - 18212492
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||| |||||||||||||||    
T  18212611 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaata 18212512  T
Q  103 aagaaaataacacttacctc 122  Q
    ||||||||||||||||||||    
T  18212511 aagaaaataacacttacctc 18212492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 3377892 - 3377778
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  3377892 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 3377793  T
Q  105 gaaaataacacttac 119  Q
    |||||||||||||||    
T  3377792 gaaaataacacttac 3377778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 2265790 - 2265965
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                 ||| ||||||||||| ||||| |||||||||||||||    
T  2265790 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaggtggcactaatagaataatactaataacagagaata 2265889  T
Q  103 aagaaaataacacttacctcnnnnnnnnnnnnngtaaca-ctaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||             |||||| ||||||||||||||||||||||||||||||||||||    
T  2265890 aagaaaataacacttacctcaaaaaaaaaaaaagtaacacctaatagaataatagtattttgtttcgtaaaaaaaa 2265965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 10728627 - 10728518
Alignment:
Q  7 tcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaaga 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||               |||| |||||||||||||||| |||||||||||||||||||    
T  10728627 tcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaa------ggtaacactaatagagtaatactaataacagagaataaaga 10728534  T
Q  107 aaataacacttacctc 122  Q
    ||||||||||||||||    
T  10728533 aaataacacttacctc 10728518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 6153249 - 6153312
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  6153249 gtaacactaatagagtaatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 6153312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 18710674 - 18710555
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng--gtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||| |||||| ||||||||    
T  18710674 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaagtagcactaatagagtaatactaataatagagaata 18710575  T
Q  103 aagaaaataacacttacctc 122  Q
    ||||||||||||||||||||    
T  18710574 aagaaaataacacttacctc 18710555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 39168250 - 39168135
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    |||||||||||||||| |||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  39168250 tatcatttaagtgtttatactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaaagtagcactaatagagtaatactaataacagagaataa 39168151  T
Q  104 agaaaataacacttac 119  Q
    ||||||||||||||||    
T  39168150 agaaaataacacttac 39168135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 39168107 - 39168049
Alignment:
Q  139 acactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  39168107 acactaatagaataatagtattttgttccgtaaaaaaaa-aacgaaggtatatatttttt 39168049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 2546044 - 2546089
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  2546044 tatcatttaagtgtttccactttataaagaaaataacatttacctc 2546089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 18710535 - 18710494
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18710535 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 18710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 15569657 - 15569613
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  15569657 tatcatttaagtgtttccactttataaagaaaataacatttacct 15569613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 18212472 - 18212412
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||| ||||    
T  18212472 gtaacactaatagaataatagtattttgtttcataaaaaaa--aacgaaggtatatatatttt 18212412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 3377758 - 3377691
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa----aaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||| |||||||||||||||||    |||| |||||||| ||||||||||||    
T  3377758 gtaacactaatagaataataatattttgtttcgtaaaaaaaaaaaaaaacgaaggtatatattttttc 3377691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 4385305 - 4385346
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  4385305 gtaatactaatagaataatagtattttgtttcgtaaaaaaaa 4385346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 4453170 - 4453214
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||    
T  4453170 tatcatttaagtgtttccactttataaaaaaaataacatttacct 4453214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 8340337 - 8340279
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    |||||||||||||| ||||||||||||||| |||||||||   |||||||| ||||||||||    
T  8340337 gtaacactaatagagtaatagtattttgttgcgtaaaaaa---aacgaaggtatatattttt 8340279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 13351429 - 13351488
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||| ||||||||    |||||||| ||||||||||||    
T  13351429 gtaacactaatagagtaatagtattttgttccgtaaaaa----aacgaaggtatatattttttc 13351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 10728189 - 10728146
Alignment:
Q  152 aatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttt 196  Q
    |||||||||||||||||||||||||| |||||||| |||||||||    
T  10728189 aatagtattttgtttcgtaaaaaaaa-aacgaaggtatatatttt 10728146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 2546110 - 2546167
Alignment:
Q  140 cactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatattt 195  Q
    |||||||||| |||| ||||||||||||||  |||||||| |||||||| ||||||||    
T  2546110 cactaatagagtaatggtattttgtttcgtaaaaaaaaaaaaacgaaggtatatattt 2546167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21865740 - 21865694
Alignment:
Q  5 tatcatttaagtgtttctactttat-aaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  21865740 tatcatttaagtgtttccactttataaaaaaaaataacatttacctc 21865694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 4037997 - 4038041
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||    
T  4037997 tatcatttaagtgtttccactttataaa-aaaaaaacatttacctc 4038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 48831711 - 48831905
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  48831711 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 48831810  T
Q  105 gaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  48831811 gaaaataacacttacctcaaaaaaaaaaaaaggtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 48831905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 27089309 - 27089499
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| |||||||||||||||||    
T  27089309 tatcatttaagtgtttctactttataaagaaaataacatttacctaaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 27089408  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  27089409 gaaaataacacttacctc-aaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aactaaggtatatatttttt 27089499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 21375133 - 21374939
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  21375133 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 21375034  T
Q  105 gaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  21375033 gaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatataatttttc 21374939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 27188992 - 27188802
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||||||||||||||||||||                ||||||||||||||||||||| |||||||||||||||||    
T  27188992 tatcatttaagtgtttccactttataaagaaaataacatttaccttaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 27188893  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  27188892 gaaaataacacttacctc-aaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aactaaggtatatatttttt 27188802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 33027369 - 33027175
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||| ||||||||||||| |||||||| ||||||||    
T  33027369 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcattaatagagtaatactaataacatagaataaa 33027270  T
Q  105 gaaaa--taacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||  ||||||||||| |             |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  33027269 gaaaaaataacacttaccccaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatatttttt 33027175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 42375446 - 42375642
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  42375446 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 42375545  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnng-taacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  42375546 agaaaataacacttacctcaaaaaaaaaaaaaaataacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 42375642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 36436580 - 36436447
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgt 164  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||    
T  36436580 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgt 36436481  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||| |||||||| ||||||||||||    
T  36436480 ttcgtaaaaaaaa-aacgaaggtatatattttttc 36436447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 31511731 - 31511598
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  31511731 ggtagcactaatagagtaatattaataatagagaataaagaaaataacacttacctc-aaaaaaaaaaaagtaacactaatagaataatagtattttgtt 31511633  T
Q  166 tcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    |||| |||||||| |||||||| ||||||||||||    
T  31511632 tcgtaaaaaaaaaaaacgaaggtatatattttttc 31511598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 10311689 - 10311883
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||               |||||||||||||||||||||||||||||||||||||||||||    
T  10311689 atttaagtgtttctactttataaagaaaataacatttacatcaaaaacaaaaaaaaaggtagcactaatagagtaatattaataacagagaataaagaaa 10311788  T
Q  109 ataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||| ||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  10311789 ataacacttacttcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatatttttt 10311883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 21744843 - 21744713
Alignment:
Q  68 tagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttc 167  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||              ||| |||||||||||||||||||||||||||    
T  21744843 tagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaataatactaatagaataatagtattttgtttc 21744744  T
Q  168 gtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||| |||||||| ||||||||||||    
T  21744743 gtaaaaaaaa-aacgaaggtatatattttttc 21744713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 34709669 - 34709539
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||||||||||    
T  34709669 ggtagcactaatagagtaatactaataacagagaataaaggaaataacacttacctcaaaaaaaaaaaa-gtaacactaatagaataatagtattttgtt 34709571  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||  |||||||| ||||||||||||    
T  34709570 tcgtaaaaaaa--aacgaaggtatatattttttc 34709539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 47586841 - 47586972
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgt 164  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||    
T  47586841 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgt 47586940  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||   |||||||| ||||||||||||    
T  47586941 ttcgtaaaaaa---aacgaaggtatatattttttc 47586972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 45686565 - 45686682
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  45686565 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 45686664  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  45686665 gaaaataacacttacctc 45686682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 21254412 - 21254546
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacct---cnnnnnnnnnnnnngtaacactaatagaataatagtatttt 162  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||    
T  21254412 ggtagcactaatagagtaataataataacagagaataaagaaaataacacttacctaaaaaataaaaataaaagtaacactaatagaataatagtatttt 21254511  T
Q  163 gtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||| |||||||| |||||||||||    
T  21254512 gtttcgtaaaaaaaa-aacgaaggtatatatttttt 21254546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 9487906 - 9487711
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||||||    
T  9487906 atttaagtgtttccactttataaaaaaaataacatttacctcaaaaataaaaaaaaaggtagcactaatagagtaatactaataacagagaataaagaaa 9487807  T
Q  109 ataacacttacctc-------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  9487806 ataacacttacctcaaaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 9487711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 36246032 - 36246149
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  36246032 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 36246131  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  36246132 gaaaataacacttacctc 36246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 40636874 - 40636981
Alignment:
Q  70 gcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt 169  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||| ||||||||||    
T  40636874 gcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtaatttgtttcgt 40636973  T
Q  170 aaaaaaaa 177  Q
    ||||||||    
T  40636974 aaaaaaaa 40636981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 45221791 - 45221905
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtatttt 162  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||    
T  45221791 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaagagtaacactaatagaataatagtatttt 45221890  T
Q  163 gtttcgtaaaaaaaa 177  Q
    |||||||||||||||    
T  45221891 gtttcgtaaaaaaaa 45221905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 47586633 - 47586751
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  47586633 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 47586732  T
Q  104 agaaaataacacttacctc 122  Q
    |||||||||||||||||||    
T  47586733 agaaaataacacttacctc 47586751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 35587943 - 35587880
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  35587943 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 35587880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 43254614 - 43254498
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||               ||||||||||||||||||||| |||||| ||||||||||    
T  43254614 tatcatttaagtgtttctactttataaagaaaataacatttacttcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataatagagaataaa 43254516  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  43254515 gaaaataacacttacctc 43254498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 47586768 - 47586824
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47586768 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctc 47586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 21313585 - 21313648
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21313585 gtaacactaatagagtaatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 21313648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 42587064 - 42587177
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc--nnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||| |||| |||||||||||||||    
T  42587064 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaacggtagcactaatagagcaatactaataacagagaata 42587163  T
Q  103 aagaaaataacact 116  Q
    ||||||||||||||    
T  42587164 aagaaaataacact 42587177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 47470672 - 47470788
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               | ||||||||||||||||||| ||||||||||||||||     
T  47470672 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaag-tagcactaatagagtaatactaataacagagaataag 47470770  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  47470771 gaaaataacacttacctc 47470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 33203459 - 33203522
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  33203459 gtaacactaatagaataatagtattttgttccgtaaaaaaagaaacgaaggtatatattttttc 33203522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 33203390 - 33203438
Alignment:
Q  74 taatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33203390 taatagagtaatattaatgacagagaataaagaaaataacacttacctc 33203438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 32169178 - 32169115
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| |||||||| ||||||||||||    
T  32169178 gtaacactaatagagtaatagtatttcgtttcataaaaaaaaaaacgaaggtatatattttttc 32169115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 40259210 - 40259149
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  40259210 taacactaatagagtaatagtattttgtttcgtaaaaaaaa-aatgaaggtatatattttttc 40259149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 35588104 - 35587987
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaat-aa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||| ||||||||||||||| |||||||||||||| ||    
T  35588104 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaa-ggtagtactaatagagtaatactaataacagagaataaa 35588006  T
Q  104 agaaaataacacttacctc 122  Q
    | |||||||||||||||||    
T  35588005 aaaaaataacacttacctc 35587987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 43254478 - 43254418
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa-aaaacaacgaaggaatatattt 195  Q
    |||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  43254478 gtaaaactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattt 43254418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 42587171 - 42587211
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  42587171 taacactaatagaataatagtattttgttccgtaaaaaaaa 42587211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 36246169 - 36246208
Alignment:
Q  138 aacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  36246169 aacactaatagaacaatagtattttgtttcgtaaaaaaaa 36246208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 48591067 - 48591016
Alignment:
Q  146 tagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||| ||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  48591067 tagagtaatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 48591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 19831728 - 19831769
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacattta 46  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  19831728 tatcatttaagtgtttccactttataaaaaaaataacattta 19831769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 40636810 - 40636855
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||    
T  40636810 tatcatttaagtgttttcactttataaaaaaaataacatttacctc 40636855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 32169245 - 32169196
Alignment:
Q  71 cactaatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||||||||    
T  32169245 cactaatagagtaatactaataacata--ataaagaaaataacacttacctc 32169196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 19831791 - 19831834
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaa 109  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||    
T  19831791 ggtagcactaatagaataatactaataacagagaataaaaaaaa 19831834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 21254346 - 21254392
Alignment:
Q  5 tatcatttaagtgtttctactttat-aaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  21254346 tatcatttaagtgtttccactttataaaaaaaaataacatttacctc 21254392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 45221728 - 45221774
Alignment:
Q  5 tatcatttaagtgtttctactttat-aaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  45221728 tatcatttaagtgtttccactttataaaaaaaaataacatttacctc 45221774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 45686715 - 45686768
Alignment:
Q  144 aatagaataatagtattttgtttcgtaaaaaaaa--caacgaaggaatatattt 195  Q
    ||||||||||||||||| ||||||||||||||||   |||||||| ||||||||    
T  45686715 aatagaataatagtattctgtttcgtaaaaaaaaataaacgaaggtatatattt 45686768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21744908 - 21744861
Alignment:
Q  5 tatcatttaagtgtttctactttat--aaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  21744908 tatcatttaagtgtttccactttataaaaaaaaaataacatttacctc 21744861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 32381316 - 32381509
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  32381316 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaataaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 32381415  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  32381416 gaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatattattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 32381509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 2179257 - 2179062
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||| ||||||||| |||||||||||||||||    
T  2179257 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaagagagtaatactaataacagagaataaa 2179158  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn-gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  2179157 gaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaccgaaggtatatattttttc 2179062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 12713809 - 12713615
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||    
T  12713809 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatattaataacagagaataaa 12713710  T
Q  105 gaaaataacacttacct-cnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||               |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  12713709 gaaaataacacttacctaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aaagaaggtatatattttttc 12713615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 4221128 - 4221320
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                |||||||||||||| ||||| |||||||||||||||||    
T  4221128 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaagtagcactaatagaataatactaataacagagaataaa 4221227  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  4221228 gaaaataacacttacctcaaaaaaaaaaa--gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 4221320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 15443956 - 15443756
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  15443956 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 15443857  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||| |||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  15443856 gaaaataatacttacctcagaaaaataaaaaataaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatatttttt 15443757  T
Q  199 c 199  Q
    |    
T  15443756 c 15443756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 30412244 - 30412442
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn---ggtagcactaatagagtaatattaataacagagaat 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                  ||||||||||||||||||||| ||||||||||||||    
T  30412244 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaat 30412343  T
Q  102 aaagaaaataacacttacctcnnnnnnnnnnnnn-gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  30412344 aaagaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 30412442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 30300132 - 30300000
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  30300132 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtt 30300033  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| ||| |||| ||||||||||||    
T  30300032 tcgtaaaaaaaa-aacaaaggtatatattttttc 30300000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 12363246 - 12363444
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  12363246 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 12363345  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||                |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  12363346 gaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 12363444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 8023627 - 8023821
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  8023627 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 8023726  T
Q  105 gaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||||              |||||||||||||||||||||||||| ||||||| |||||||| |||||||| ||||||||||    
T  8023727 gaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtatttcgtttcgtaaaaaaaaaaaacgaaggtatatattttt 8023821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 195
Target Start/End: Complemental strand, 2671903 - 2671708
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  2671903 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 2671804  T
Q  105 gaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  2671803 gaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattt 2671708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 43402938 - 43402751
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||                ||||||||||||||||||||| |||||||||||||||||    
T  43402938 tatcatttaagtgcttccactttataaagaaaataacatttacct-taaaaacaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 43402840  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  43402839 gaaaataacacttacctc---aaaaaaaatagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatatttttt 43402751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 12775036 - 12774865
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||    
T  12775036 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaa--ggtagcactaatagagtaatattaataacagagaataaa 12774939  T
Q  105 gaaaataacacttacct-cnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    |||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||    
T  12774938 gaaaataacacttacctaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa 12774865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 13156528 - 13156726
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn---ggtagcactaatagagtaatattaataacagagaat 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                  ||||||||||||||||||||| ||||||||||||||    
T  13156528 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaat 13156627  T
Q  102 aaagaaaataacacttacctcnnnnnnnnnnnnn-gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||| |||||||||||||||||              ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  13156628 aaaaaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatggtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 13156726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 35235370 - 35235561
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggt-agcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                || |||||||||||||||||| |||||||||| |||||    
T  35235370 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaagttagcactaatagagtaatactaataacagaaaataa 35235469  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttt 196  Q
    |||||||||||||||||||             |||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  35235470 agaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcctaaaaaaaa-aacgaaggtatatatttt 35235561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 3037049 - 3037166
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  3037049 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 3037148  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  3037149 gaaaataacacttacctc 3037166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 16856610 - 16856727
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  16856610 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 16856709  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  16856710 gaaaataacacttacctc 16856727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 31168624 - 31168741
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  31168624 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 31168723  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  31168724 gaaaataacacttacctc 31168741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 2236153 - 2236269
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  2236153 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 2236251  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  2236252 gaaaataacacttacctc 2236269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 36686306 - 36686116
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  36686306 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 36686207  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||| |||             |||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||    
T  36686206 agaaaataacacttagctc---aaaaaaaaaagtaacactaatagaataatagtattttgtttcataaaaaaa--aacgaaggtatatattttttc 36686116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 9586825 - 9587025
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||| |||||||||||||||    
T  9586825 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaata 9586924  T
Q  103 aagaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttt 196  Q
    ||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||  || ||||| |||||||||    
T  9586925 aagaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aatgaaggtatatatttt 9587022  T
Q  197 ttc 199  Q
    |||    
T  9587023 ttc 9587025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 13228189 - 13228303
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  13228189 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 13228288  T
Q  105 gaaaataacacttac 119  Q
    |||||||||||||||    
T  13228289 gaaaataacacttac 13228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 24794474 - 24794299
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  24794474 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 24794375  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||                ||||||||||||||| ||||||||||||||||||||||||||    
T  24794374 gaaaataacacttacctcaaaaaaaataaaaaaagtaacactaatagaacaatagtattttgtttcgtaaaaaaaa 24794299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 32383344 - 32383149
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  32383344 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 32383245  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnn-gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    | |||| |||||||||||               |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  32383244 aaaaaa-aacacttacctaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 32383149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 35640443 - 35640326
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||                |||||||||||||||||||| |||||||||||||||||    
T  35640443 tatcatttaagtgtttctactttataaagaaaatagcatttacctcaaaaacaaaaaaaaaagtagcactaatagagtaatactaataacagagaataaa 35640344  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  35640343 gaaaataacacttacctc 35640326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 6603539 - 6603741
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                 ||||||||||||||||||||| |||||||||||||||    
T  6603539 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaata 6603638  T
Q  103 aagaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt---aaaaaaaacaacgaaggaatatatttt 196  Q
    ||||||||||||||||||||                |||||| |||||||||||||||||||||||||||   |||||||| |||||||| |||||||||    
T  6603639 aagaaaataacacttacctcaaaaaaaaaaaaagaggtaacattaatagaataatagtattttgtttcgtaaaaaaaaaaaaaacgaaggtatatatttt 6603738  T
Q  197 ttc 199  Q
    |||    
T  6603739 ttc 6603741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 14647007 - 14647204
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||                ||||||||||||||||||||| |||||||||||||| |    
T  14647007 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaatga 14647106  T
Q  104 agaaaataacacttacctc--nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatattttt 197  Q
    |||||||||||||||||||               ||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||    
T  14647107 agaaaataacacttacctcaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaaacgaaggtatatattttt 14647204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 72 - 199
Target Start/End: Original strand, 19956010 - 19956135
Alignment:
Q  72 actaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaa 171  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||||||             ||||||||||||||||||||||||||||||||||||    
T  19956010 actaataaagtaatactaataacagagaataaagaaaataacaattacctcaaaaaaaaaaaa-gtaacactaatagaataatagtattttgtttcgtaa 19956108  T
Q  172 aaaaaacaacgaaggaatatattttttc 199  Q
    |||||| |||||||| ||||||||||||    
T  19956109 aaaaaa-aacgaaggtatatattttttc 19956135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 29391749 - 29391865
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               |||||||||| |||||||||| |||||||||||||||||    
T  29391749 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaaaa-ggtagcactagtagagtaatactaataacagagaataaa 29391847  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  29391848 gaaaataacacttacctc 29391865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 39275926 - 39275732
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| |||||| |||||||||    
T  39275926 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaaagtagcactaatagagtaatactaataatagagaataa 39275827  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatata 192  Q
    |||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  39275826 agaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatata 39275732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 5592103 - 5591989
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||||               ||||||||||||||||||||| ||||||||| |||||||    
T  5592103 tatcatttaagtgtttctactttataaataaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagtgaataaa 5592004  T
Q  105 gaaaataacacttac 119  Q
    |||||||||||||||    
T  5592003 gaaaataacacttac 5591989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 15530929 - 15530735
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||| ||||||||||||||||||    
T  15530929 atttaagtgtttctactttataaagaaaataacatttacatcaaaaaaaaaaaaa---gtagcactaatagagtaatattattaacagagaataaagaaa 15530833  T
Q  109 ataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||                   ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||    
T  15530832 ataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaaacgaaggtatatatttttt 15530735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 5997538 - 5997734
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  5997538 tatcatttaaatgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 5997637  T
Q  104 agaaaataacacttacctc----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||||||||                 |||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||| ||||    
T  5997638 agaaaataacacttacctcaaaaaaaaaaaaaaaaggtaacactaatagaataatagtattttgtttcataaaaaaa--aacgaaggtatatatatttt 5997734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 27130823 - 27130634
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||| ||||| ||||||||||| ||||||| |||||||||    
T  27130823 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggt-gcactgatagagtaatactaataactgagaataaa 27130725  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||| ||| |||             ||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||    
T  27130724 gaaaataacatttatctcaaaaaaaaaaaa-gtaacactaatagaataatagtattttgtttcgtaaaaaa---aacgaaggtatatattttttc 27130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 7652006 - 7651945
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  7652006 taacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 7651945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 39744179 - 39744292
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||                ||||||||||||||||||||| ||||| |||||||||||    
T  39744179 tatcatttaagtgtttctactttataaagaaaataacatttgcct-aaaaaacaaaaaaaaggtagcactaatagagtaatactaatagcagagaataaa 39744277  T
Q  105 gaaaataacacttac 119  Q
    |||||||||||||||    
T  39744278 gaaaataacacttac 39744292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 9160319 - 9160432
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc-nnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  9160319 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaataaataaaaaatgtagcactaatagagtaatactaataacagagaataa 9160418  T
Q  104 agaaaataacactt 117  Q
    | ||||||||||||    
T  9160419 aaaaaataacactt 9160432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 9160465 - 9160529
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  9160465 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 9160529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 19526175 - 19526074
Alignment:
Q  74 taatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaa 173  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||             |||||||||||||| |||||||||||||||||||||||    
T  19526175 taatagagtaatactaataacagagaataaagaaaataacatttacctc--aaaaaaaaaaagtaacactaatagagtaatagtattttgtttcgtaaaa 19526078  T
Q  174 aaaa 177  Q
    ||||    
T  19526077 aaaa 19526074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 39744317 - 39744378
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  39744317 taacactaatagaataatagtattttgttccgtaaaaaaaa-aacgaaggtatatattttttc 39744378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 1710896 - 1710952
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  1710896 ggtagcactaatagagtaatagtaataacagaaaataaagaaaataatacttacctc 1710952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 29391893 - 29391953
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattt 195  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  29391893 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattt 29391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 1710976 - 1711039
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  1710976 gtaatactaatagaaaaatagtattttgtttcgtaaaaaaaaaaaccaaggtatatattttttc 1711039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 3037186 - 3037227
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3037186 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 3037227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 5591962 - 5591902
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||| |||||||||   |||||||| ||||||||||||    
T  5591962 gtaacactaatagaataatagtattttgttccgtaaaaaa---aacgaaggtatatattttttc 5591902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 25871954 - 25871999
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  25871954 tatcatttaagtgtttccactttataaagaaaataacatttacctc 25871999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 2236291 - 2236346
Alignment:
Q  138 aacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||| ||||||||    
T  2236291 aacactaatagaataatagtattttgttccgtaaaaaaa--aacgaaggtatatattt 2236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 3669897 - 3669855
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaac 178  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  3669897 gtaacactaatagagtaatagtattttgtttcgtaaaaaaaac 3669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 1710832 - 1710873
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacattta 46  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  1710832 tatcatttaagtgtttccactttataaagaaaataacattta 1710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 19955950 - 19955995
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  19955950 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 19955995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 25872017 - 25872058
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgtaaaaaaaac 178  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  25872017 taacactaatagagtaatagtattttgtttcgtaaaaaaaac 25872058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 30300195 - 30300150
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  30300195 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 30300150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 31168760 - 31168801
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  31168760 gtaacactaatagaataatagtattttgtttcataaaaaaaa 31168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 35640307 - 35640244
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||| |||||||||||||| |  |||||||| ||| |||| ||||||||||||    
T  35640307 gtaacactaatagaacaatagtattttgttcctaaaaaaaaaaaactaaggtatatattttttc 35640244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 7e-39; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 29586662 - 29586466
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  29586662 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 29586563  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn--gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||                |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  29586562 gaaaataacacttatctaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 29586466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 3271160 - 3270966
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  3271160 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 3271061  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||||||||             |||||| || |||||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  3271060 agaaaataacacttacctcaaaaaaaaaaaaagtaacattagtagaataatagtattttgttccgtaaaaaaaaaaacgaaggtatatatttttt 3270966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 15313749 - 15313550
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| |||||||||||||||||    
T  15313749 tatcatttaagtgtttctactttataaagaaaataacatttacctaaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 15313650  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  15313649 gaaaataacacttacctcaaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatatttttt 15313550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 33525026 - 33524833
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaa-taacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||               ||||||||||||||||||||| ||||||||||||||||    
T  33525026 tatcatttaagtgtttccactttataaaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 33524927  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||             |||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  33524926 agaaaataacacttacctc--aaaaaaaaaaagtaacactaataaaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 33524833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 22099418 - 22099222
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  22099418 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 22099319  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn--gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||                |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  22099318 gaaaataacacttatctaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 22099222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 195
Target Start/End: Complemental strand, 26844252 - 26844059
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||    
T  26844252 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatattaataacagagaataa 26844153  T
Q  104 agaaaataacacttacctc----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    |||||||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  26844152 agaaaataacacttacctcaaaaaaataaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattt 26844059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 39827028 - 39826898
Alignment:
Q  69 agcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcg 168  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||    
T  39827028 agcactaatagagaaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcg 39826929  T
Q  169 taaaaaaaacaacgaaggaatatattttttc 199  Q
    ||| ||||| |||||||| ||||||||||||    
T  39826928 taataaaaaaaacgaaggtatatattttttc 39826898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 49220117 - 49220307
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  49220117 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 49220215  T
Q  105 gaaaataacacttacct-cnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||| |             ||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  49220216 gaaaataacacttacctacaaaaaaaaaaaaggtaacactaatagaataatagtattttgtttcgtaaaaaa---aacgaaggtatatatttttt 49220307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 13121294 - 13121423
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  13121294 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctc--aaaaaaaaaaagtaacactaatagaataatagtattttgtt 13121391  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||  |||||||| ||||||||||||    
T  13121392 tcgtaaaaaaa--aacgaaggtatatattttttc 13121423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 17499511 - 17499686
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  17499511 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 17499610  T
Q  105 gaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||||||    
T  17499611 gaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa 17499686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 36300740 - 36300936
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  36300740 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaataataataacagagaataaa 36300839  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn--gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| |                 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  36300840 gaaaataacacttatcaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 36300936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 44910275 - 44910144
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  44910275 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctc-aaaaaaaaaaaagtaacactaatagaataatagtattttgtt 44910177  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    || ||||||||| |||||||| ||||||||||||    
T  44910176 tcataaaaaaaa-aacgaaggtatatattttttc 44910144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 7710586 - 7710703
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  7710586 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 7710685  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  7710686 gaaaataacacttacctc 7710703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 31150124 - 31150254
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  31150124 ggtagcactaatagaataatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaa-gtaacactaatagaataatagtattttgtt 31150222  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    |||||||||||| |||||||| ||||| ||||    
T  31150223 tcgtaaaaaaaaaaacgaaggcatatactttt 31150254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 39583483 - 39583289
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               | ||||||||||||||||||| ||||||||||| |||||    
T  39583483 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaagatagcactaatagagtaatactaataacagaggataaa 39583384  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn-gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||               |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  39583383 gaaaataacacttacctaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 39583289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 36838325 - 36838525
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||| |||||| ||||||||    
T  36838325 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaggtagcactaatagagtaatactaataa-agagaata 36838423  T
Q  103 aagaaaataacacttacctcnnnnnnnnnnnnn-----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  36838424 aagaaaataacacttacctcaaaaaaataaaaaataaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttt 36838523  T
Q  198 tc 199  Q
    ||    
T  36838524 tc 36838525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 42063941 - 42064058
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  42063941 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 42064040  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  42064041 gaaaataacacttacctc 42064058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 50170943 - 50171127
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||| ||||| |||||||||||||||||    
T  50170943 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaa-----ggtagcactaatagaataatactaataacagagaataaa 50171037  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||| |||||||             |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||    
T  50171038 gaaaataacatttacctc--aaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatatatttt 50171127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 50351533 - 50351341
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               | ||||||||||||||||||| |||||||||||||||||    
T  50351533 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaag-tagcactaatagagtaatactaataacagagaataaa 50351435  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||              ||||||||||||||| ||||||||||||||||| |||||||| ||| |||| ||||||||||||    
T  50351434 gaaaataacacttacctcaaaaaaaaaaaa--taacactaatagaatgatagtattttgtttcgtaaaaaaaaaaaacaaagggatatattttttc 50351341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 33561541 - 33561741
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||||||||||||||||||||||    
T  33561541 atttaagtgtttctactttataaagaaaataacatttacatcaaaaacaaaaaaaaaagtagcactaatagagtaatattaataacagagaataaagaaa 33561640  T
Q  109 ataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgt----aaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||                   ||||||||||||||||||||||||||||||||||    |||||||| |||||||| |||||||||||    
T  33561641 ataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaaaaacgaaggtatatatttttt 33561740  T
Q  199 c 199  Q
    |    
T  33561741 c 33561741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 1918526 - 1918328
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  1918526 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaaaaaaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 1918428  T
Q  105 gaaaataacacttacctc-----nnnnnnnnnnnnngt-aacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||||                  || |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  1918427 gaaaataacacttacctcaaaaaaaaaaaaaaaaaagtaaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatatttttt 1918329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 41150914 - 41151051
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn-----gtaacactaatagaataatagtatt 160  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||                  |||||||||||||||||||||||||    
T  41150914 ggtagcactaatagagtaatactaataatagagaataaagaaaataacacttacctcaaaaaaataaaacaaaaagtaacactaatagaataatagtatt 41151013  T
Q  161 ttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  41151014 ttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 41151051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 9169482 - 9169351
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||    
T  9169482 ggtaccactaatagagcaatactaataacagagaataaagaaaataacacttacct-aaaaaaaaaaaaagtaacactaatagaataatagtattttgtt 9169384  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| |||||||| ||||| ||||||    
T  9169383 tcgtaaaaaaaa-aacgaaggtatataatttttc 9169351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 19898543 - 19898741
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataa---cagagaat 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| ||||||   ||||||||    
T  19898543 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataataacagagaat 19898642  T
Q  102 aaagaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    |||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19898643 aaagaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattt 19898741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 26204714 - 26204582
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn--gtaacactaatagaataatagtattttgt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |                 |||||||||||||||||||||||||||||    
T  26204714 gtagcactaatagagtaataataataacagagaataaagaaaataacacttatcaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgt 26204615  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||| |||||||| ||||||||||    
T  26204614 ttcgtaaaaaaaaaaacgaaggtatatattttt 26204582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 17047233 - 17047117
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  17047233 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 17047135  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  17047134 gaaaataacacttacctc 17047117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 38967092 - 38967297
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  38967092 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 38967191  T
Q  104 agaaaataacact----tacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatat 193  Q
    ||||||||| |||    ||||||                   |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  38967192 agaaaataatacttacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgttccgtaaaaaaaaaaacgaaggtatatat 38967291  T
Q  194 tttttc 199  Q
    ||||||    
T  38967292 tttttc 38967297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 323370 - 323254
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                |||||| ||||||||||||| |||||||||| ||||||    
T  323370 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaat-gtagcattaatagagtaatactaataacagaaaataaa 323272  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  323271 gaaaataacacttacctc 323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 46370299 - 46370111
Alignment:
Q  14 agtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaaataac 113  Q
    |||||||| ||||||||||||||||||||||||||||               ||||||||| ||| ||||||| ||||||| ||||||||||||||||||    
T  46370299 agtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaggtagcacttataaagtaatactaataactgagaataaagaaaataac 46370200  T
Q  114 acttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||                 ||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||||||    
T  46370199 acttacctcaaaaaaataaaaaaaaagtaacactaatagaataatggtattttgtttcgtaaaaaaataaacgaaggtatatatttttt 46370111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 2498286 - 2498226
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  2498286 taacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttttc 2498226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 17047094 - 17047029
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa--aaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||    
T  17047094 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaaacgaaggtatatattttttc 17047029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1507369 - 1507414
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  1507369 tatcatttaagtgtttccactttataaagaaaataacatttacctc 1507414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 7710723 - 7710764
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7710723 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 7710764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 23710509 - 23710464
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  23710509 tatcatttaagtgtttccactttataaagaaaataacatttacctc 23710464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 25602343 - 25602302
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25602343 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 25602302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 31150059 - 31150104
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  31150059 tatcatttaagtgtttccactttataaagaaaataacatttacctc 31150104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 47134299 - 47134340
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgtaaaaaaaac 178  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47134299 taacactaatagaataatagtattttgtttcgtaaaaaaaac 47134340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 323233 - 323169
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa-aaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||| ||||| ||||||| |||| |||||||| ||||||||||||    
T  323233 gtaacactaatagaataatagtatcttgttccgtaaaaaaaaaaaacgaaggtatatattttttc 323169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 3661315 - 3661251
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaca-acgaaggaatatattttttc 199  Q
    |||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  3661315 gtaacactaatagagtaatagtattttgtttcgaaaaaaaaaaagacgaaggtatatattttttc 3661251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 25602480 - 25602436
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  25602480 tatcatttaagtgtttccactttataaagaaaataacatttacct 25602436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 30774437 - 30774386
Alignment:
Q  147 agaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  30774437 agaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 30774386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 38676854 - 38676794
Alignment:
Q  140 cactaatagaataatagtattttgtttcgtaaaa-aaaacaacgaaggaatatattttttc 199  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  38676854 cactaatagagtaatagtattttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 38676794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 1507511 - 1507573
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||  ||||||||||||    
T  1507511 gtaacactaatagagtaatagtattttgtttcataaaaaaaa-aacgaagttatatattttttc 1507573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 2498403 - 2498358
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  2498403 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 2498358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 9169545 - 9169500
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  9169545 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 9169500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 26204777 - 26204732
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  26204777 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 26204732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 38676920 - 38676875
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  38676920 tatcagttaagtgtttccactttataaagaaaataacatttacctc 38676875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 39827094 - 39827049
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  39827094 tatcatttaagtgttttcactttataaagaaaataacatttacctc 39827049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 44718767 - 44718827
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||| |||||||||   |||||||| ||||||||||||    
T  44718767 gtaacactaatagagtaatagtattttgttccgtaaaaaa---aacgaaggtatatattttttc 44718827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 13121230 - 13121274
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  13121230 tatcatttaagtgtttccactttataaa-aaaataacatttacctc 13121274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 44718614 - 44718659
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||    
T  44718614 tatcatttaagtgtttccactttataaagaacataacacttacctc 44718659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 44910338 - 44910294
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  44910338 tatcatttaagtgtttccactttataaa-aaaataacatttacctc 44910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 18347188 - 18347249
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| |||| |||||||||| | ||||||||  |||||||| ||||||||||||    
T  18347188 gtaacactaatagagtaattgtattttgttccataaaaaaa--aacgaaggtatatattttttc 18347249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 122
Target Start/End: Complemental strand, 2498330 - 2498299
Alignment:
Q  91 taacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||||||||||||||    
T  2498330 taacagagaataaagaaaataacacttacctc 2498299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 122
Target Start/End: Original strand, 18347136 - 18347167
Alignment:
Q  91 taacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||||||||||||||    
T  18347136 taacagagaataaagaaaataacacttacctc 18347167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 122
Target Start/End: Original strand, 44718716 - 44718747
Alignment:
Q  91 taacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||||||||||||||    
T  44718716 taacagagaataaagaaaataacacttacctc 44718747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 42064091 - 42064144
Alignment:
Q  144 aatagaataatagtattttgtttcgtaaaaaaaa--caacgaaggaatatattt 195  Q
    ||||||||||||||||| ||||||||||||||||   |||||||| ||||||||    
T  42064091 aatagaataatagtattctgtttcgtaaaaaaaaataaacgaaggtatatattt 42064144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 47134254 - 47134288
Alignment:
Q  88 taataacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||||||||||||||| |||||||    
T  47134254 taataacagagaataaagaaaataacatttacctc 47134288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 18347040 - 18347085
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| | |||||||||||| ||||| |||||||    
T  18347040 tatcatttaagtgtttccaatttataaagaaattaacacttacctc 18347085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 4e-37; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 34904437 - 34904245
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  34904437 tatcatttaagtgtttacactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 34904338  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  34904337 agaaaataacacttacctcaaaaaaaaaa---gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 34904245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 2442925 - 2442727
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  2442925 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 2442826  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  2442825 gaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttt 2442727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 32732258 - 32732062
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  32732258 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 32732159  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  32732158 gaaaataacacttacccaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttt 32732062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 6709336 - 6709540
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||    
T  6709336 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatattaataacagagaataaa 6709435  T
Q  105 gaaaataaca----cttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatt 194  Q
    ||||||||||    ||||||||                   |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  6709436 gaaaataacatttacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgttccgtaaaaaaaaaaacgaaggtatatatt 6709535  T
Q  195 ttttc 199  Q
    |||||    
T  6709536 ttttc 6709540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 31451591 - 31451784
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  31451591 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 31451690  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn-----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||||||||||                  |||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  31451691 gaaaataacacttacctcaaaaaaaaaaaaaaaaaggtaacattaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattt 31451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 10856631 - 10856455
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  10856631 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 10856532  T
Q  105 gaaaataacacttacctc----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||                 ||||||||||||||||||||||||||||||||||||||||||    
T  10856531 gaaaataacacttacctcaaaaaaataaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa 10856455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 34684719 - 34684855
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||             ||||||||||||||||||| ||||||||||    
T  34684719 ggtagcactaatagagtaatactaataatagagaataaagaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatggtattttgtt 34684818  T
Q  166 tcgt---aaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||   |||||||| |||||||| ||||||||||||    
T  34684819 tcgtaaaaaaaaaaaaaacgaaggtatatattttttc 34684855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 20805496 - 20805293
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  20805496 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaccaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 20805397  T
Q  105 gaaaataac----acttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatt 194  Q
    |||||||||    |||||||||                   |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  20805396 gaaaataacgcttacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgttccgtaaaaaaaa-aacgaaggtatatatt 20805298  T
Q  195 ttttc 199  Q
    |||||    
T  20805297 ttttc 20805293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 30810798 - 30810915
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||| || |||||||||| |||||||||||||||||    
T  30810798 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcattagtagagtaatactaataacagagaataaa 30810897  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  30810898 gaaaataacacttacctc 30810915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 34232563 - 34232753
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               | ||||||||||||||||||| |||||||||||||||||    
T  34232563 tatcatttaagtgtttccactttataaaaaaaataacatttacctcgaaaacaaaaaaaaag-tagcactaatagagtaatactaataacagagaataaa 34232661  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcg-taaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||||             |||||||||||||||||||||||||| |||||| |||||||||  ||||||| ||||||||||    
T  34232662 gaaaataacacttacctc--aaaaaaaaaaagtaacactaatagaataatagtatttcgtttcgttaaaaaaaaacacgaaggtatatattttt 34232753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 31099668 - 31099867
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    |||||||||| |||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| |||||| |||||||||    
T  31099668 tatcatttaaatgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataatagagaataa 31099767  T
Q  104 agaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    |||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  31099768 agaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttt 31099865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 12432314 - 12432490
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  12432314 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 12432413  T
Q  104 agaaaataacacttacctc---nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    | |||||||||||||||||                |||||||||||||||||||||||||||||| |||||||||||    
T  12432414 aaaaaataacacttacctcaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgttccgtaaaaaaaa 12432490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 12297810 - 12297698
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  12297810 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaaataaaaaaa-ggtagcactaatagagtaatactaataacagagaataaa 12297712  T
Q  105 gaaaataacactta 118  Q
    ||||||||||||||    
T  12297711 gaaaataacactta 12297698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 5943432 - 5943293
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn-----gtaacactaatagaataatagtatt 160  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||                  |||||||||||||| ||||||||||    
T  5943432 ggtaacactaatagagtaatactaataacagagaataaagaaaataacacttatctcaaaaaaataaaaataaaagtaacactaatagagtaatagtatt 5943333  T
Q  161 ttgtttcgtaaaa-aaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||| |||| |||||||| ||||||||||||    
T  5943332 ttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 5943293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 558768 - 558712
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  558768 ggtagcactaatagaataatactaataatagagaataaagaaaataacacttacctc 558712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 558833 - 558788
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  558833 tatcatttaagtgtttccactttataaagaaaataacatttacctc 558788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 30810935 - 30810976
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30810935 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 30810976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 5943488 - 5943444
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacct 49  Q
    |||||| |||||||||| | |||||||||||||||||||||||||    
T  5943488 tatcatataagtgtttccaatttataaagaaaataacatttacct 5943444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 4392381 - 4392573
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||| ||    
T  4392381 tatcatttaagtgtttccactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaatgaa 4392480  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| |||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  4392481 gaaaataacacttatctcaaaaaaaaaaa--gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 4392573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 4939037 - 4939229
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  4939037 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaacaaaaaaaggtagcactaatagagtaatactaataacagagaataa 4939136  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||| |||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4939137 agaaaataatacttacctcaaaaaaataaa--gtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatatttttt 4939229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 12233625 - 12233815
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| || ||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  12233625 tatcatttaagtgtttccacattataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 12233724  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  12233725 gaaaataacacttacctc---aaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 12233815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 42117388 - 42117193
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  42117388 tatcatttaagtgtttccactttataaagaaaataacatttacctcaataacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 42117289  T
Q  105 gaaaataacacttacctc--nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  42117288 gaaaataacacttacctcaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatactttttc 42117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 46895771 - 46895579
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||| ||||||||||||    
T  46895771 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaat-ggtagcactaatagagtaatactaatgacagagaataaa 46895673  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             |||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||    
T  46895672 gaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgttccgtaaaaacaa-aacgaaggtatatattttttc 46895579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 9043337 - 9043467
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  9043337 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc-aaaaaaaaaaaagtaacactaatagaataatagtattttgtt 9043435  T
Q  166 tcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||| |||||||| |||||||||||    
T  9043436 tcgtaaaaaaaa-aacgaaggtatatatttttt 9043467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 33115406 - 33115273
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  33115406 ggtagcactaatagagtaatactaataacagaaaataaagaaaataacacttacctcaaaaaaaaaaaaggtaacactaatagaataatagtattttgtt 33115307  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||  |||||||| ||||||||||||    
T  33115306 tcgtaaaaaaagaaacgaaggtatatattttttc 33115273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 45780478 - 45780608
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  45780478 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctc--aaaaaaaaaaagtaacactaatagaataatagtattttgtt 45780575  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| |||||||| ||||||||||||    
T  45780576 tcgtaaaaaaaa-aacgaaggtatatattttttc 45780608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 39087211 - 39087408
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  39087211 tatcatttaagtgttttcactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 39087310  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn---gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||| |||||||                |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  39087311 gaaaataacatttacctcaaaaaaaaaaaaaaaggtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 39087408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 9031646 - 9031838
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||                |||||||||||||||||||| |||||||||| ||||||    
T  9031646 tatcatttaagtgtttccactttataaagaaaataatatttacctcaaaaaaaaaaaa----gtagcactaatagagtaatactaataacagataataaa 9031741  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||             ||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||    
T  9031742 gaaaataacacttacctcaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaaacgaaggtatatattttttc 9031838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 53275128 - 53274999
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtt 165  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  53275128 ggtagcactaataaagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaa---gtaacactaatagaataatagtattttgtt 53275032  T
Q  166 tcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| |||||||| ||||||||||||    
T  53275031 tcgtaaaaaaaa-aacgaaggtatatattttttc 53274999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 3010208 - 3010091
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  3010208 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 3010109  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  3010108 gaaaataacacttacctc 3010091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 21370323 - 21370206
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  21370323 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 21370224  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  21370223 gaaaataacacttacctc 21370206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 27185284 - 27185480
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||| ||||||||||    
T  27185284 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataatagagaataaa 27185383  T
Q  105 gaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  27185384 gaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattttt 27185480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 35468511 - 35468314
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  35468511 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 35468412  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||||||                   ||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  35468411 gaaaataacacttacccaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgaaaaaaaaaaaacgaaggtatatatttttt 35468314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 52670492 - 52670375
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  52670492 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 52670393  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  52670392 gaaaataacacttacctc 52670375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 29664419 - 29664220
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||| |||||||||||||||||    
T  29664419 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaaaaaagtagcactaatagagtaatactaataacagagaataaa 29664320  T
Q  105 gaaaataacacttacctc-----nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||                  ||||||||||| |||||||||||||||||| ||||||||||| ||| |||| ||||||||||||    
T  29664319 gaaaataacacttacctcaaaaaaataaaataaaaagtaacactaattgaataatagtattttgttccgtaaaaaaaaaaactaaggtatatattttttc 29664220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 36007730 - 36007863
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgt 164  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||              ||||||||||||||||||| |||||||||    
T  36007730 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatggtattttgt 36007829  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||| |||||||| ||||||||||||    
T  36007830 ttcgtaaaaaaaa-aacgaaggtatatattttttc 36007863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 25440127 - 25440326
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||||||||| |||||||||||||||||||||||||||||||||||               | ||||||||||||||||||| |||||||||||||||||    
T  25440127 tatcatttaaatgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaag-tagcactaatagagtaatactaataacagagaataaa 25440225  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||| |||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  25440226 gaaaataacatttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacgaaggtatatatttttt 25440325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 22038061 - 22038199
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtat 159  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||    
T  22038061 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaaaaaaagtaacactaatagaataatagtat 22038160  T
Q  160 tttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  22038161 tttgtttcgtaaaaaaaaaaacgaaggtatatatttttt 22038199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 4355236 - 4355437
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  4355236 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaataaaatgtagcactaatagagtaatactaataacagagaataa 4355335  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttt 197  Q
    ||||||||||||||| |||                   |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  4355336 agaaaataacacttatctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaacaaaggtatatattttt 4355435  T
Q  198 tc 199  Q
    ||    
T  4355436 tc 4355437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 8829517 - 8829654
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc-----nnnnnnnnnnnnngtaacactaatagaataatagtattt 161  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||                  ||||||||||||||||||| ||||||    
T  8829517 gtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaataaaaaaaaaagtaacactaatagaataatggtattt 8829616  T
Q  162 tgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  8829617 tgtttcgtaaaaaaaaaaacgaaggtatatattttttc 8829654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 29414021 - 29413827
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  29414021 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaagtagcactaatagagtaatactaataacagagaataa 29413922  T
Q  104 agaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||              |||||||||||||||||||| ||||||||||||||||||||  || ||||| ||||||||||||    
T  29413921 agaaaataacacttacctcaaaaaaagaaaaaagtaacactaatagaataataatattttgtttcgtaaaaaaa--aatgaaggtatatattttttc 29413827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 35777044 - 35777237
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  35777044 tatcatttaagtgtttccactttataaaaaaaataacatttacctctaaaaaaaaaa----ggtagcactaatagagtaatactaataacagagaataaa 35777139  T
Q  105 gaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt--aaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||| | ||              ||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||    
T  35777140 gaaaataacacttgcttcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaaacgaaggtatatattttttc 35777237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 11151585 - 11151783
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaataaaga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||| | |||||||||||||||||||    
T  11151585 atttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaggtagcactaatagagtaacactaataacagagaataaaga 11151684  T
Q  107 aaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  11151685 aaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaataaaacgaaggtatatattttttc 11151783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 18583347 - 18583228
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng--gtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||||||||||||||||||||||||    
T  18583347 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaataaaaataaaaaagtagcactaatagagtaatattaataacagagaata 18583248  T
Q  103 aagaaaataacacttacctc 122  Q
    ||||||||||||||||||||    
T  18583247 aagaaaataacacttacctc 18583228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 35821965 - 35822078
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc--nnnnnnnnnnnnngtaacactaatagaataatagtattttg 163  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||    
T  35821965 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaaagtaacactaatagaataatagtattttg 35822064  T
Q  164 tttcgtaaaaaaaa 177  Q
    ||||||||||||||    
T  35822065 tttcgtaaaaaaaa 35822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 37114926 - 37115041
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||    
T  37114926 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaatagagtaatactaataacagagaataa 37115025  T
Q  104 agaaaataacacttac 119  Q
    ||||||||||||||||    
T  37115026 agaaaataacacttac 37115041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 51010719 - 51010918
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn-ggtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||                ||||||||||||| ||||||| ||||||||||||||||    
T  51010719 tatcatttaagtgtttctattttataaaaaaaataacatttacctcaaaaacaaaaaaaaaaggtagcactaataaagtaatactaataacagagaataa 51010818  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||| |||||||                 |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  51010819 agaaaataacatttacctcaaaaaaaaaaaaaaaaagtaacactaatagaataataatattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 51010918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 19513530 - 19513728
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng-gtagcactaatagagtaatattaataacagagaataa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||| ||||||||||||||||    
T  19513530 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaagtagcactaatagagtaatactaataacagagaataa 19513629  T
Q  104 agaaaataacacttacctcnnnnnnnnnnnnn-----gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||||||||||||                  |||||||||||||||||||||||||||||| ||||||||||  ||| |||| |||||||||||    
T  19513630 agaaaataacacttacctcaaaaaaaaaaaataaaaagtaacactaatagaataatagtattttgttccgtaaaaaaa--aactaaggtatatatttttt 19513727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 27397419 - 27397610
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||  ||               |||||||||||||||||||||||||||||||||||||||||||    
T  27397419 atttaagtgtttctactttataaagaaaataacatttatatcaaaaacaaaaaaaaaggtagcactaatagagtaatattaataacagagaataaagaaa 27397518  T
Q  109 ataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||| ||                   |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  27397519 ataacacttacttcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacaaaggtatatattt 27397610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 33004762 - 33004961
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnng--gtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||| |||||||||||||||    
T  33004762 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaagtagcactaatagagtaatactaataacagagaata 33004861  T
Q  103 aagaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||||||||||||                   |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  33004862 aagaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaaaaaacgaaggcatatattt 33004961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 55495595 - 55495734
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc------nnnnnnnnnnnnngtaacactaatagaataatagtat 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||    
T  55495595 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtat 55495694  T
Q  160 tttgtttcgt-aaaaaaaacaacgaaggaatatatttttt 198  Q
    |||||||||| |||||||| |||||||| |||||| ||||    
T  55495695 tttgtttcgtaaaaaaaaaaaacgaaggtatatatatttt 55495734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 45906575 - 45906458
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  45906575 tatcatttaagtgttttcactttataaaaaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 45906476  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||||||||    
T  45906475 gaaaataacacttacctc 45906458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 31679393 - 31679286
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgttt 166  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||    
T  31679393 gtagcactaataaagtaatactaataacagagaataaagaaaataacacttacctcaacaaaaaaaa---taacactaatagaataatagtattttgttt 31679297  T
Q  167 cgtaaaaaaaa 177  Q
    |||||||||||    
T  31679296 cgtaaaaaaaa 31679286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 26826954 - 26826816
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn-------gtaacactaatagaataatagtat 159  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||                    ||||||||||||||||||||||||    
T  26826954 gtagcactaatagagtaatactaataatagagaataaagaaaataacacttacctcaaaaaaataaaaaataaaaagtaacactaatagaataatagtat 26826855  T
Q  160 tttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  26826854 tttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 26826816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 56372941 - 56372822
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn--ggtagcactaatagagtaatattaataacagagaata 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||                 |||||||||||||||| |||| |||||||||||||||    
T  56372941 tatcatttaagtgtttctactttataaagaaaataacaattacctcaaaaacaaaaaaaaaaaggtagcactaatagagcaatactaataacagagaata 56372842  T
Q  103 aagaaaataacacttacctc 122  Q
    ||||||||||||||||||||    
T  56372841 aagaaaataacacttacctc 56372822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 23867526 - 23867720
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    |||| |||||||||||||||||||||||||||||||||||||||||               | ||| ||| ||||||||||| |||||| ||||||||||    
T  23867526 tatcgtttaagtgtttctactttataaagaaaataacatttacctcaaaaaaaaaaaaaaag-tagtactgatagagtaatactaataatagagaataaa 23867624  T
Q  105 gaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23867625 gaaaataacacttacctcaaaaaaataaaaataaaaagtaacactaatagaataatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattt 23867720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 44442580 - 44442460
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc---nnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaat 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||                  || |||||||||||||||||| ||||||||||||||    
T  44442580 tatcatttaagtgtttccactttataaagaaaataacatttacctcaaaaaaacaaaaaaaaaaggcagcactaatagagtaatactaataacagagaat 44442481  T
Q  102 aaagaaaataacacttacctc 122  Q
    |||||||||||||||||||||    
T  44442480 aaagaaaataacacttacctc 44442460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 15636304 - 15636241
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||| ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15636304 gtaatactaatagagtaatagtattttgtttcgtaaaaaaaaaaacgaaggtatatattttttc 15636241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 53407629 - 53407574
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc 122  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  53407629 gtagcactaatagagtaatactaataacagaggataaagaaaataacacttacctc 53407574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 55358121 - 55358183
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  55358121 gtaacactaatagagtaatagtattttgtttcgtaaaaaaaa-aacgaaggtatatattttttc 55358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 43225366 - 43225411
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43225366 tatcatttaagtgtttctactttataaagaaaataacatttacctc 43225411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 8942261 - 8942197
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa-aaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  8942261 gtaacactaatagaataatagtattttgttccgtaaaaaaaaaaaacgaaggtatatattttttc 8942197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 55856257 - 55856376
Alignment:
Q  74 taatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnngtaacactaatagaataatagtattttgtttcgtaaaa 173  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||               ||||||||||||||||||| |||||||||||||||||    
T  55856257 taatagagcaatactaataacagagaataaagaaaataacacttacctaaaaaaaaaaaaaa-taacactaatagaataataatattttgtttcgtaaaa 55856355  T
Q  174 aaaacaacgaaggaatatatttt 196  Q
    |||  |||||||| |||||||||    
T  55856356 aaa--aacgaaggtatatatttt 55856376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 47417265 - 47417328
Alignment:
Q  137 taacactaatagaataatagtattttgtttcgt-aaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||||    
T  47417265 taacactaatagaataatggtattttgtttcgtaaaaaaaaaaaacgaaggtatatattttttc 47417328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 47417221 - 47417271
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacact 116  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  47417221 ggtagcactaatagagtaatactaataacaaagaataaagaaaataacact 47417271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 7706894 - 7706849
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  7706894 tatcatttaagtgtttctactttataaagaaaataccatttacctc 7706849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 8829453 - 8829498
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  8829453 tatcatttaagtgtttcaactttataaagaaaataacatttacctc 8829498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 198
Target Start/End: Complemental strand, 44442513 - 44442381
Alignment:
Q  69 agcactaatagagtaatattaataacagagaataaagaaaataacacttacctcnnnnnnnnnnnnn----gtaacactaatagaataatagtattttgt 164  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||                 ||||||||| |||||||||   |||||||    
T  44442513 agcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaataaaaaaaaagtaacactactagaataatgagattttgt 44442414  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatatttttt 198  Q
    ||||||||||||| |||||||| |||||| ||||    
T  44442413 ttcgtaaaaaaaa-aacgaaggtatatatatttt 44442381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 37115067 - 37115133
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaaca---acgaaggaatatattttttc 199  Q
    |||||||||||||||||||||||||||||| ||||||||||| |   ||||||| ||||||||||||    
T  37115067 gtaacactaatagaataatagtattttgttccgtaaaaaaaaaaaacacgaaggtatatattttttc 37115133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 3010072 - 3010031
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  3010072 gtaacactaatagaataatagtattttgttccgtaaaaaaaa 3010031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 9043272 - 9043317
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||    
T  9043272 tatcatttaagtatttccactttataaagaaaataacatttacctc 9043317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 18583209 - 18583168
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  18583209 gtaacactaatagaataatagtattttgttccgtaaaaaaaa 18583168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 26827017 - 26826972
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||    
T  26827017 tatcatttaagtgtttccactttataaagaaaataacatttaactc 26826972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 31953550 - 31953505
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  31953550 tatcatttaagtgtttccactttataaagaaaataacacttacctc 31953505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 53275193 - 53275148
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  53275193 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 53275148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 56372803 - 56372762
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaa 177  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  56372803 gtaacactaatagaataatagtattttgttccgtaaaaaaaa 56372762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 7706739 - 7706703
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaa 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  7706739 gtaacactaatagaataatagtattttgtttcgtaaa 7706703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 42124443 - 42124506
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||||| ||||||||||||||| ||| ||||||| |||||| | ||||||| ||||    
T  42124443 gtaacactaatagagtaatagtattttgttccgttaaaaaaaaaacgaaagtatatattctttc 42124506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 52670351 - 52670292
Alignment:
Q  138 aacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    |||||||||||| ||||||||||||||| ||||||||||  ||| |||| ||||||||||||    
T  52670351 aacactaatagattaatagtattttgttccgtaaaaaaa--aactaaggtatatattttttc 52670292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 35821903 - 35821948
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    |||||||||| |||||| |||||||||| |||||||||||||||||    
T  35821903 tatcatttaaatgtttccactttataaaaaaaataacatttacctc 35821948  T

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Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 47417159 - 47417203
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  47417159 tatcatttaagtgtttccactttataaa-aaaataacatttacctc 47417203  T

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Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 55856186 - 55856231
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    |||||||||| |||||| |||||||||| |||||||||||||||||    
T  55856186 tatcatttaattgtttccactttataaaaaaaataacatttacctc 55856231  T

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Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 7706832 - 7706796
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataa 103  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7706832 gtagcactaatagagtaatactaataacagagaataa 7706796  T

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Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 22037998 - 22038044
Alignment:
Q  5 tatcatttaagtgtttctactttat-aaagaaaataacatttacctc 50  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  22037998 tatcatttaagtgtttccactttataaaaaaaaataacatttacctc 22038044  T

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Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 55495536 - 55495574
Alignment:
Q  9 atttaagtgtttctactttataaagaaaataacatttac 47  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  55495536 atttaagtatttctactttataaggaaaataacatttac 55495574  T

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Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 25198947 - 25198983
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataac 41  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  25198947 tatcatttaagtgtttccactttataaaaaaaataac 25198983  T

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Target: scaffold0246 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 7492 - 7360
Alignment:
Q  66 ggtagcactaatagagtaatattaataacagagaataaagaaaataacacttacctc-nnnnnnnnnnnnngtaacactaatagaataatagtattttgt 164  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||    
T  7492 ggtagcactaatagagtaatactaataacagagaataaagaaaataacacttacctcaaaaaaaaaaaaaagtaacactaatagaataatagtattttgt 7393  T
Q  165 ttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||  |||||||| ||||||||||||    
T  7392 ttcgtaaaaaaa--aacgaaggtatatattttttc 7360  T

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Target: scaffold0246; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 7554 - 7509
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||    
T  7554 tatcatttaagtgtttccactttataaaaaaaataacatgtacctc 7509  T

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Target: scaffold0002 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 431763 - 431646
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaataaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||| |||||||||||||||||    
T  431763 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaggtagcactaatagagtaatactaataacagagaataaa 431664  T
Q  105 gaaaataacacttacctc 122  Q
    ||||||||||||| ||||    
T  431663 gaaaataacacttgcctc 431646  T

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Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 431621 - 431558
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaa--aaaacaacgaaggaatatattttt 197  Q
    |||||||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||||    
T  431621 gtaacactaaaagaataatagtattttgtttcgtaaaaaaaaaaaaacgaaggtatatattttt 431558  T

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Target: scaffold0027 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 41404 - 41523
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc--nnnnnnnnnnnnnnnggtagcactaatagagtaatattaataacagagaata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                 ||||| ||||||||||||||| |||||| ||||||||    
T  41404 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaaaaaaaaaggtagtactaatagagtaatactaataatagagaata 41503  T
Q  103 aagaaaataacacttacctc 122  Q
    ||||||||||||||||||||    
T  41504 aagaaaataacacttacctc 41523  T

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Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 41556 - 41609
Alignment:
Q  144 aatagaataatagtattttgtttcgtaaaaaaaa--caacgaaggaatatattt 195  Q
    ||||||||||||||||| ||||||||||||||||   |||||||| ||||||||    
T  41556 aatagaataatagtattctgtttcgtaaaaaaaaataaacgaaggtatatattt 41609  T

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Target: scaffold0122 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 12367 - 12567
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctcnnnnnnnnnnnnnnn---ggtagcactaatagagtaatattaataacagagaat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||||||||| ||||||||  ||||    
T  12367 tatcatttaagtgtttctactttataaagaaaataacatttacctcaaaaacaaaacaaaaaaaggtagcactaatagagtaatactaataacattgaat 12466  T
Q  102 aaagaaaataacacttacctcnnnnnnnnnnnnn------gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattt 195  Q
    ||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  12467 aaagaaaataacacttacctaaaaaaaataaaaaataaaagtaacactaatagaataatagtattttgtttcgtaaaaaaa--aacgaaggtatatattt 12564  T
Q  196 ttt 198  Q
    |||    
T  12565 ttt 12567  T

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Target: scaffold0197 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 27858 - 27917
Alignment:
Q  136 gtaacactaatagaataatagtattttgtttcgtaaaaaaaacaacgaaggaatatatttt 196  Q
    |||| ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||    
T  27858 gtaagactaatagagtaatagtattttgtttcgtaaaaaaaa-aacgaaggtatatatttt 27917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 28740 - 28782
Alignment:
Q  67 gtagcactaatagagtaatattaataacagagaataaagaaaa 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  28740 gtagcactaatagagtaatactaataacagagaataaagaaaa 28782  T

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Target: scaffold0197; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 29979 - 30029
Alignment:
Q  149 aataatagtattttgtttcgtaaaaaaaacaacgaaggaatatattttttc 199  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  29979 aataatagtattttgtttcgtaaaaaaaaaaatgaaggtatatattttttc 30029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 28679 - 28724
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||    
T  28679 tatcatttaagtgtttccactttacaaaaaaaataacatttacctc 28724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1526 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1526
Description:

Target: scaffold1526; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1641 - 1686
Alignment:
Q  5 tatcatttaagtgtttctactttataaagaaaataacatttacctc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  1641 tatcatttaagtgtttccactttataaaaaaaataacatttacctc 1686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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