View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19601_high_33 (Length: 208)
Name: NF19601_high_33
Description: NF19601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19601_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 4879153 - 4878977
Alignment:
| Q |
17 |
cagaagtcacctattatcatagaattattcaacataacaattcatagttaacatagaaataaatattttacgaaaaccaaagtnnnnnnntgtgaagcct |
116 |
Q |
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| T |
4879153 |
cagaagtcacctattatcatagaattattcaacataacaattcatagttaacatagaaatacatattttacaaaaaccaaagtaaaaaa-tgtgaagcct |
4879055 |
T |
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| Q |
117 |
tacatagttcaacttgaaaatagaaatatggaaaccatttaatggaagacaaataattgagtcacagtaaaccatatt |
194 |
Q |
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| T |
4879054 |
tacatagttcaacttgaaaatagaaatacggaaaccatttaatggaagacaaataattgagtcacaataaaccatatt |
4878977 |
T |
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