View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19601_low_15 (Length: 339)
Name: NF19601_low_15
Description: NF19601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19601_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 103 - 322
Target Start/End: Complemental strand, 33816540 - 33816321
Alignment:
| Q |
103 |
atgtataatggtgacactccaaaggttccaatgccaaaatgagtctttattcattcatgatcatgtagaacaacatgcatgcatcaaattaatccacttt |
202 |
Q |
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| T |
33816540 |
atgtataatggtgacactccaaaggttccaatgccaaaatgagtctttattcattcatgatcatgtagaacaacatgcatgcatcaaattaatccacttt |
33816441 |
T |
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| Q |
203 |
atcccgcgtgccttccggagagaaagacagagactgagtcagttatgaaaattcagaactgaaaaatgatgaatcagaacataagaaattagagacatgt |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
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| T |
33816440 |
atcccgcgtgccttccggagagaaagacagagactgagtcagttatgaaaattcagaactgaaaaatcatgaatcagaacataagagattagagacatgt |
33816341 |
T |
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| Q |
303 |
cttttagttatggtagtaca |
322 |
Q |
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|||||||||||||||||||| |
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| T |
33816340 |
cttttagttatggtagtaca |
33816321 |
T |
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