View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19601_low_26 (Length: 240)
Name: NF19601_low_26
Description: NF19601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19601_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 43014997 - 43015203
Alignment:
| Q |
15 |
caaaggcatatacaacaggaacacgaaagaggagaaagattcaaaccgaagagtgtgacttacaaggaagtacaggaggagaaacaagatggcacaaaac |
114 |
Q |
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| T |
43014997 |
caaaggcatatacaacaggaacacgaaagaggagaaagattcaaaccgaagagtgtgacttacaaggaagtacaggaggagaaacaagatggcacaaaac |
43015096 |
T |
|
| Q |
115 |
tggtaagaccagacctgttatggttaatggtaaacaaaaaggttgcaagaaaattcttgttctctacaccaactttggaaagaatcgaaaacccgagaag |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
43015097 |
tggtaagaccagacctgttatggttaatggtaaacaaaaaggttgcaagaaaattcttgttctctacaccaacttcggaaagaatcgaaaacccgagaag |
43015196 |
T |
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| Q |
215 |
acgaatt |
221 |
Q |
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||||||| |
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| T |
43015197 |
acgaatt |
43015203 |
T |
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