View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19602_high_50 (Length: 226)
Name: NF19602_high_50
Description: NF19602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19602_high_50 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32325680 - 32325909
Alignment:
| Q |
1 |
aaaaggggtaaaaggagaaagnnnnnnntatctatgatgtctcttcaccctctcttaccacaatataatacctattgacagtagtatatctcaactcctt |
100 |
Q |
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| T |
32325680 |
aaaaggggtaaaaggagaaagaaaaaaatatctatgatgtctcttcaccctctcttaccgcaatataataccgattgacagcagtatatctcgactcctt |
32325779 |
T |
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| Q |
101 |
gagaggttgccgagacatcaaagaatcc----nnnnnnnttatgtannnnnnnncacgtcattaaagttaaaacgacgtgaaaagcaaaatactttaggt |
196 |
Q |
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|||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32325780 |
gagaggttgccgagacatcaaataatacaaaaaaaaatattatgtattttttttcacgtcattaaagttaaaacgacgtgaaaagcaaaatactttaggt |
32325879 |
T |
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| Q |
197 |
ttaaaagagtgaaatgaaaaattgaagtga |
226 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32325880 |
ttaaaagagtgaaatgaaaaattgaagtga |
32325909 |
T |
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