View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19602_low_26 (Length: 315)
Name: NF19602_low_26
Description: NF19602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19602_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 932818 - 933113
Alignment:
| Q |
4 |
gatggacatcatcattctgatttaaagcctgactcttttgctggtaacaaacacattttccagttagtttaattctcatttcttatctcagcttcattct |
103 |
Q |
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| T |
932818 |
gatggacataatcattctgatttaaagcctgactcttttgctggtaacaaacacattttccagttagtttaattctcatttcttatctcagcttcattct |
932917 |
T |
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| Q |
104 |
gagtttctaatgggagatttacttattccaggaaatgcatcatcgggtgatcacaggatagctccgcgggaagatgtaagcttactatnnnnnnnctatc |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
932918 |
gagtttctaatgggagatttacttattccaggaaatgcatcatcgggtgatcacaggatagctccgcgggaagatgtaagcttactataaaaaaactatc |
933017 |
T |
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| Q |
204 |
tatataatttcaagttttgtatttgttatttttctgtcgcgtatatttgttacgaacaagttcaattttttatgcttgatatttgctatccctatt |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
933018 |
tatataatttcaagttttgtatttgttatttttctgtcgcgtatatttgttatgaacaagttcaattttttatgcttgatatttgctatccctatt |
933113 |
T |
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