View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19602_low_55 (Length: 208)
Name: NF19602_low_55
Description: NF19602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19602_low_55 |
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Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 35312772 - 35312944
Alignment:
| Q |
20 |
gcaagaatcaatcatattgttaccatgcattatccgaaatttggattgagcactatttagaatgttcattagtggctatggaatttagggtagacataca |
119 |
Q |
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| T |
35312772 |
gcaagaatcaatcatattgttaccatgcatcatccgaaatttggattgagcactatgtagaatgttcattagtggctatggaatttagggtagacataca |
35312871 |
T |
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| Q |
120 |
tgatacaagctccatgctcgacattcataattcatggtcctacggtcattatttatcccactatagtacaagtt |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
35312872 |
tgatacaagctccatgctcgacattcataattcatggtcctacggtcatta-ttatcccactatagtacaagtt |
35312944 |
T |
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