View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19602_low_7 (Length: 500)
Name: NF19602_low_7
Description: NF19602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19602_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 22 - 488
Target Start/End: Original strand, 32417398 - 32417864
Alignment:
| Q |
22 |
caggtataggtggaccatgattgcctggacttatcaatatatctgtgtgaatttgttctttgaaggcagcagcaaaacctctgagataagccaaatcttg |
121 |
Q |
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| T |
32417398 |
caggtataggtggaccatgattgcctggacttatcaatatatctgtgtgaatttgttctttgaaggcagcagcaaaacctctgagataagccaaatcttg |
32417497 |
T |
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| Q |
122 |
tttttgttgattaaattggtctatttgctcagaacaccatcttacacaatcatcaagtgtctgcagaggaaaaataatattattcattgcctcttttggc |
221 |
Q |
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| T |
32417498 |
tttttgttgattaaattggtctatttgctcagaacaccatcttacacaatcatcaagtgtctgcagaggaaaaataatattattcattgcctcttttggc |
32417597 |
T |
|
| Q |
222 |
ttataaacttattttcaaatcaaccataaaactatgaaaagaattagagcttgccttactcgaatttcgccgcgaaacaggagaatcattcggagtagtg |
321 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32417598 |
ttataaacttattttcaaatcaaccataaaattatgaaaagaattagagcttgccttactcgaatttcgccgcgaaacaggagaatcattcggagtagtg |
32417697 |
T |
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| Q |
322 |
attgtttttgctttctcagtttcaagatcattcatcatgttgattatgctcctaactccttcataacatgccccacatatcgtattccttggaggcctta |
421 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32417698 |
attgtttttgctttctcagtttcaagaccattcatcatgttgattatgctcctaactccttcataacatgccccacatattgtattccttggaggcctta |
32417797 |
T |
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| Q |
422 |
atattaatggcatagttgtgcacacacaacaatccatttttgcttcttagaatttctctcctatgct |
488 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32417798 |
atattaatggcatagttgtgcacacacaacaatccatttttgcttcttagaatttctctcctatgct |
32417864 |
T |
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