View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19603_high_15 (Length: 280)
Name: NF19603_high_15
Description: NF19603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19603_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 2971713 - 2971459
Alignment:
| Q |
10 |
ataatactcctctaaattaaaagacttttgagtaaaactgaagagttgagagttgttttctccttgtatagtacaatattcgaatccatttatgcttctt |
109 |
Q |
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|||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2971713 |
ataacactcctctaaattaaaagacttttgagtaaaaccgaagagttcagagttgttttctccttgtatagtacaatattcgaatccatttatgcttctt |
2971614 |
T |
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| Q |
110 |
gttgtaacctgtattctccattgttttcgttctaatcaatgatatagtttcttttgttaaaaagattactttaggcctcacattgacttggacaaacctt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
2971613 |
gttgtaacctgtattctccattgttttcgttctaatcaatgatatagtttcttttgttaaaaagattactttaggcctcacattgatttggacaaacctt |
2971514 |
T |
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| Q |
210 |
ggttaatgggatcataaacactttgtatttttcttcatttattttgagtttgtga |
264 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2971513 |
ggttaatgtgatcataaacactttgtatttttcttcatttattttgagtttgtga |
2971459 |
T |
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