View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19603_low_21 (Length: 249)
Name: NF19603_low_21
Description: NF19603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19603_low_21 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 24211810 - 24211576
Alignment:
| Q |
1 |
ttcaaatttttctttggatcaaaatggaaggtcaaattaaagtgatttatacactcatttgataagggagtgatttatacctttgaaccgatcacatctg |
100 |
Q |
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| T |
24211810 |
ttcaaatttttctttggatcaaaatggaaggtcaaattaaagtgatttatacactcatttgataagggagtgatttatacctttgaaccgatcacatctg |
24211711 |
T |
|
| Q |
101 |
attgattagtgatttatacactcatttgacgtcaaagaacatgaacctcttttttacaagaggtacgacccgaaccaagtttggatcttaacaactgaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
24211710 |
attgattagtgatttatacactcatttgacgtcaaagaacatgaacctcttttttacaagagttacgacccgaaccaagtttggatcttaacaactgaac |
24211611 |
T |
|
| Q |
201 |
caatgagcaaactgattcctctattttaattgcat |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
24211610 |
caatgagcaaactgattcctctattttaattgcat |
24211576 |
T |
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