View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19604_high_14 (Length: 250)
Name: NF19604_high_14
Description: NF19604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19604_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 33926105 - 33925864
Alignment:
| Q |
1 |
cttttgcagcaacacaagcacaacaagatggttgtactgggaattataggattttttattcaccttatggcaattttctagtacctgtagttccaactca |
100 |
Q |
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| T |
33926105 |
cttttgcagcaacacaagcacaacaagatggttgtactgggaattataggattttttattcaccttatggcaattttctagtacctgtagttccaactca |
33926006 |
T |
|
| Q |
101 |
tgcagaactagcctagtaattcttgtattggtgccctaattcatggattttataatgtcaagttgcaagttctcatcttaaacagtaacaccataaaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33926005 |
tgcagaactagcctagtaattcttgtattggtgccctaattcatggattttataatgtcaagttgcaagttctcatcttaaacagtaacaccataaaagt |
33925906 |
T |
|
| Q |
201 |
ttgtttggatcgacatatttgagcttatctgctagtataatc |
242 |
Q |
| |
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||||||||||||||||||||||||||||||||||| |||||| |
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| T |
33925905 |
ttgtttggatcgacatatttgagcttatctgctagaataatc |
33925864 |
T |
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