View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19606_high_5 (Length: 331)
Name: NF19606_high_5
Description: NF19606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19606_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 63 - 315
Target Start/End: Original strand, 23398362 - 23398611
Alignment:
| Q |
63 |
aagcgccgaaattaagttctaagcttatctctcatatcatctaggatttaccattgcttattatcatctaacatttaccacagaaagcaagtaaattatc |
162 |
Q |
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| T |
23398362 |
aagcgccgaaattaagttccaagcttatctttcatatcatctgagatttaccattgcctattatcatctaacatttaccacggaaatcaagtaaattatc |
23398461 |
T |
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| Q |
163 |
atatcctaattccacaaaaaaggcttacccnnnnnnncttccaccaatagtttgaatctaattaagtcaactgtcatgatcatatccactaaaaccctag |
262 |
Q |
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| T |
23398462 |
atatcctaattccacaaaaaaggcttaccctttttttcttccaccaatagtttgaatc---ttaagtcaactgtcatgaccatatccactaaaaccctag |
23398558 |
T |
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| Q |
263 |
caaatcggtgttcctaccccaattgcaatgccaaatgtacttgcgaaaagtat |
315 |
Q |
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| T |
23398559 |
caaatcggtgttcctaccccacttgcaatgccaaatgtacttgcgaaaagtat |
23398611 |
T |
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