View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19606_low_7 (Length: 268)
Name: NF19606_low_7
Description: NF19606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19606_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 47802305 - 47802517
Alignment:
| Q |
20 |
aatcggtagaaacaagaaaggagtactagtacatgtacattgaaaagagataannnnnnnngggttcacgctacaaataataatagtaagtagatagcaa |
119 |
Q |
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| T |
47802305 |
aatcggtagaaacaagaaaggagtactagtacat--acattgaaaagagataattttttttgggttcacgctacaaataataata---agtacatag--- |
47802396 |
T |
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| Q |
120 |
tagcatcatcattaatttgaagacaaaacggtagaatctagagtgagcgtgacactctatcttgctgctgcacattttacaatggctcaaaacagagaaa |
219 |
Q |
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| T |
47802397 |
---catcatcattaatttgaagacaaaacggtagaatctagagtgagcgtgacactctatcttgctgctgcacattttacaatggctcaaaacagagaaa |
47802493 |
T |
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| Q |
220 |
aaatcaagagaaaacaacctgaac |
243 |
Q |
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| T |
47802494 |
aaatcaagagaaaacaacctgaac |
47802517 |
T |
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