View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19608_low_7 (Length: 208)
Name: NF19608_low_7
Description: NF19608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19608_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 26483853 - 26484009
Alignment:
| Q |
19 |
caaagtgagtgttgaagaaggtgaatccaaaatcacggagcaaacaaagggaaataagaatacaaagttgaaaaatagagaaaattgtgacgatgttggt |
118 |
Q |
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| T |
26483853 |
caaagtgagtgttgaagaaggtgaatccaaaatcacggagcaaataaagggaaataagaatacaaagttgaaaaatagagaaaattgtgatgatgttggt |
26483952 |
T |
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| Q |
119 |
tccaaggaaaattcaaaaggttcagagattcaaaatcataagcctgattacattcat |
175 |
Q |
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| T |
26483953 |
tccaaggaaaattcaaaaggttcagagattcaaaatcataagcctgattacattcat |
26484009 |
T |
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