View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19609_low_6 (Length: 214)
Name: NF19609_low_6
Description: NF19609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19609_low_6 |
 | |
|
| [»] scaffold0102 (1 HSPs) |
| | |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 5348153 - 5347968
Alignment:
| Q |
20 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattcc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5348153 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgatgaattcc |
5348054 |
T |
|
| Q |
120 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5348053 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagagag--agagagaatcattagaaagtgtgtgatgttgatgatgatgt |
5347968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 36429717 - 36429536
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| || |||||||||| |||||||| |
|
|
| T |
36429717 |
tgttgatgttgttgtccatgctattcatcataaaccttgttctttttcaaacaagttcatgatcttttctattattcattttgttgttgatgaattccaa |
36429618 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
36429617 |
aaggttgttgttgattaattcaagaaggtaacaaacaagag----agagagaatcattataaagtgtgtgatgttaatgatgatgt |
36429536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 26380115 - 26380043
Alignment:
| Q |
34 |
tgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgtt |
106 |
Q |
| |
|
|||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26380115 |
tgttaatgttattcatcataaaccttgttctttttccaacaagttcatgatcttttctgttattcattctgtt |
26380043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 169; Significance: 8e-91; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 17732506 - 17732690
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
17732506 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattcattctgttgttgatgaattccaa |
17732605 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17732606 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagagagagagaatcattagaaagtgtgtgaggttgatgatgatg |
17732690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 15347862 - 15347677
Alignment:
| Q |
20 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattcc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15347862 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgatgaattcc |
15347763 |
T |
|
| Q |
120 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15347762 |
aaagggttgttgttgattaatttaagaaggtaacaaacaagagag--agagagaatcattagaaagtgtgcgatgttgatgatgatgt |
15347677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 6009117 - 6009306
Alignment:
| Q |
20 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||| |||||| |
|
|
| T |
6009117 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagtccacgatcttttctgttattcattttgttgttgatgaattcc |
6009216 |
T |
|
| Q |
120 |
aaagggttgttgttgattaattcaagaaggtaacaaaca--agagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6009217 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagagagagagagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
6009306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 30709928 - 30709743
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| || |||||||||| |||||||| |
|
|
| T |
30709928 |
tgttgatgttgttgttcatgctattcatcataaaccttgttctttttcaaacaagttcatgatcttttctattattcattttgttgttgatgaattccaa |
30709829 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30709828 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagagagagagaatcattataaagtgtgtgatgttgatgatgatgt |
30709743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 54560463 - 54560278
Alignment:
| Q |
20 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattcc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
54560463 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgatgaattcc |
54560364 |
T |
|
| Q |
120 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54560363 |
aaagggttgtagttgattaattcaagaaggtaacaaacaagagag--agagagaatcattagaaagtgtgtgatgttgatgatgatgt |
54560278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 50837949 - 50838131
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
50837949 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattcattctgttgttgatgaattccaa |
50838048 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatg |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
50838049 |
agggttgttgttgattaattcaagaaggtaacaaacaagagag--agagagaatcattagaaagtgtgtgaggttgatgatgatg |
50838131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 47471130 - 47470948
Alignment:
| Q |
20 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattcc |
119 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||||| ||||| |
|
|
| T |
47471130 |
gatgttgatgttgttgttcatgctattcattataaaccttgttctttttccaacaagttcatgatcttttctattattcattttgttgttgat-gattcc |
47471032 |
T |
|
| Q |
120 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
47471031 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagag----agagagaatcattataaagtgtgtgatgttgatgatgatgt |
47470948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 164; Significance: 8e-88; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 4593052 - 4592872
Alignment:
| Q |
23 |
gttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaaa |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4593052 |
gttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgatgaattccaaa |
4592953 |
T |
|
| Q |
123 |
gggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592952 |
gggttgttgttgattaattcaagaaggtaacaaacaagag----agagagaatcattagaaagtgtgtgatgttgatgatgatgt |
4592872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 10256027 - 10255923
Alignment:
| Q |
103 |
tgttgttgataaattccaaagggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgat |
202 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10256027 |
tgttgttgatgaattccaaagggttgttgttgattaattcaagaaggtaacaaacaagagagagagagagaatcattataaagtgtgtgatgttgatgat |
10255928 |
T |
|
| Q |
203 |
gatgt |
207 |
Q |
| |
|
||||| |
|
|
| T |
10255927 |
gatgt |
10255923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 10256132 - 10256012
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||||| |||||||| |
|
|
| T |
10256132 |
tgttgatgttgttgttcatgctattcatcataaaccttgttctttttccaacaagttcatgatcttttctattattcattttgttgttgatgaattccaa |
10256033 |
T |
|
| Q |
122 |
agggttgttgttgattaattc |
142 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
10256032 |
agggttgttgttgatgaattc |
10256012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 163; Significance: 3e-87; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 14791107 - 14790918
Alignment:
| Q |
20 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattcc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
14791107 |
gatgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatattttctgttattctttctgttgttgatgaattcc |
14791008 |
T |
|
| Q |
120 |
aaagggttgttgttgattaattcaagaaggtaacaaacaagagagatagagag--aatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
14791007 |
aaagggttgttgttgattaattgaagaaggtaacaaacaagagagagagagagataatcattagaaagtgtgtgatgttgatgatgatgt |
14790918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 20111976 - 20112156
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataac-ccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattcca |
120 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||||| ||||||| |
|
|
| T |
20111976 |
tgttgatgttgttgttcatgctattcatcataaaaccttgttctttttccaacaagttcatgatcttttctattattcattttgttgttgatgaattcca |
20112075 |
T |
|
| Q |
121 |
aagggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20112076 |
aagggttgctgttgattaattcaagaaggtaacaaacaag------agagagaatcattataaagtgtgtgatgttgatgatgatgt |
20112156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 18308912 - 18308860
Alignment:
| Q |
113 |
aaattccaaagggttgttgttgattaattcaagaaggtaacaaacaagagaga |
165 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
18308912 |
aaattccaaagagttgttgttgattaattcaagatggtaacaaacaagagaga |
18308860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 27455355 - 27455172
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||||| |||||||| |
|
|
| T |
27455355 |
tgttgatgttgttgttcatgctattcatcataaaccttgttctttttccaacaagttcatgatcttttctattattcattttgttgttgatgaattccaa |
27455256 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27455255 |
agggttgttgttgattaattcaagaaggtaacaaacaagagag--agagagaatcattataaagtgtgtgatgttgatgatgatgt |
27455172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 49681754 - 49681850
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattc |
118 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||| || |||||||||| ||||| |
|
|
| T |
49681754 |
tgttgatgttgttgttcatgctattcatcataaacgttgttctttttccaacaatttcatgatcttttatgttattcattatgttgttgatgaattc |
49681850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 49681835 - 49681911
Alignment:
| Q |
127 |
tgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49681835 |
tgttgttgatgaattcaagaaggtaacaaacaagagaga----gagaatcattagaaagtgtgtgatgttgatgatgatgt |
49681911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0102 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0102
Description:
Target: scaffold0102; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 32787 - 32606
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||| |
|
|
| T |
32787 |
tgttgatgttgttgttcatgctattcatcataaaccttgttctttttccaacaagttcatgatattttctattattcattctgttgttgatgaatttcaa |
32688 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32687 |
agggttgttgttgattaattcaagaaggtaacaaacaagag----agagagaatcattagaaagtgtgtgatgttgatgatgatgt |
32606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 47445472 - 47445653
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
47445472 |
tgttgatgttgttgttcatgctattcattataaaccttgttctttttccaacaagttcatgattttttctgttattcattctgttgttgatgaattccaa |
47445571 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagagaatcattagaaagtgtgtgatgttgatgatgatgt |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
47445572 |
agggttgttgttgattaattcaagaaggtaacaaacaagag----agagagaatcattagaaaatgtgtgatgttgatgatgatgt |
47445653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 36067750 - 36067599
Alignment:
| Q |
22 |
tgttgatgttggtgttcatgctattcatcataacccttgttctttttccaacaagttcatgatcttttctgttattctttctgttgttgataaattccaa |
121 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
36067750 |
tgttgatgttgttgttcatgctattcatcataaaccttgttctttttccaacaagttcatgatcttttctgttattcattctgttgttgatgaattccaa |
36067651 |
T |
|
| Q |
122 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagatagagaga |
173 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36067650 |
agggttgttgttgattaattcaagaaggtaacaaacaagagagagagagaga |
36067599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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