View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19610_high_2 (Length: 204)
Name: NF19610_high_2
Description: NF19610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19610_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 55113990 - 55114163
Alignment:
| Q |
20 |
atacgtgaatgaattaacagcatcatgaagcatgatttgaaatgaagatttacgtgaaataatgaaagcattatattatgttaattatggaa-gaagatt |
118 |
Q |
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| T |
55113990 |
atacgtgaatgaattaacagcatcatgaagcatgatttgaaatgaagatttacgtgaaataatgaaagcattatattatgttaattatggaaggaagatt |
55114089 |
T |
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| Q |
119 |
aatcaagtaagtaact-aaccgaaacaagaaagcatgacacagcaacgtatgtatgaacgtcgtgatggaaatg |
191 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55114090 |
aatcaagtaagtaactaaaccgaaacaagaaagcatgacacagcaacgtatgtatgaacgtcgtgatggaaatg |
55114163 |
T |
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