View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19612_low_19 (Length: 301)
Name: NF19612_low_19
Description: NF19612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19612_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 506610 - 506891
Alignment:
| Q |
1 |
gtgtagctcagtgtgctgagtttataggtgaactgactaagatttattcatgattttaaattgtggttagcatgacagttgtgttaggattaggatttat |
100 |
Q |
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| T |
506610 |
gtgtagctcagtatgctgagtttataggtgaactgactaagatttattcatgattttaaattgtggttagcatgacagttgtgttaggattagggttttt |
506709 |
T |
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| Q |
101 |
aatattatagaagattaaggacaaatgtagttgatgtagcagtagttatagttgcaatgttgttacatgaaactcaacaacttttgtgtaacccactata |
200 |
Q |
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| T |
506710 |
aatattatagaagattaaggacaaatgtagttgatgtagcagtagttatagttgcaatgttgttacatgaaactcaacaacttttgtgtaacccactata |
506809 |
T |
|
| Q |
201 |
ttaaaaatttattacgaccatatttcatctaatgtgatcagagtaatccgatagtggtaatctaatagcatttgatcaaaga |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
506810 |
ttaaaaatttattacgaccatatttcatctaatgtgatgagagtaatccgatagtggtaacctaatagcatttgatcaaaga |
506891 |
T |
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