View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19613_high_18 (Length: 350)

Name: NF19613_high_18
Description: NF19613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19613_high_18
NF19613_high_18
[»] chr4 (28 HSPs)
chr4 (18-346)||(18750821-18751161)
chr4 (246-346)||(15166465-15166565)
chr4 (259-346)||(7583789-7583876)
chr4 (246-346)||(17335355-17335455)
chr4 (246-346)||(22171745-22171845)
chr4 (257-346)||(10106292-10106381)
chr4 (266-346)||(9536775-9536855)
chr4 (246-346)||(12616711-12616811)
chr4 (261-342)||(17711307-17711388)
chr4 (246-346)||(11252129-11252229)
chr4 (246-346)||(25025103-25025203)
chr4 (251-317)||(8968076-8968142)
chr4 (244-342)||(14573450-14573547)
chr4 (246-346)||(9849707-9849807)
chr4 (290-346)||(19603901-19603957)
chr4 (287-346)||(17108715-17108774)
chr4 (245-294)||(8928312-8928361)
chr4 (270-346)||(10432175-10432251)
chr4 (274-330)||(16928937-16928993)
chr4 (255-343)||(17218529-17218616)
chr4 (246-346)||(17434431-17434531)
chr4 (246-346)||(19556541-19556639)
chr4 (259-346)||(20828152-20828239)
chr4 (256-342)||(22350250-22350336)
chr4 (258-342)||(9263362-9263446)
chr4 (279-346)||(10236586-10236653)
chr4 (251-294)||(12289165-12289208)
chr4 (246-346)||(25096297-25096394)
[»] chr6 (35 HSPs)
chr6 (256-346)||(9519729-9519819)
chr6 (258-346)||(14641629-14641717)
chr6 (244-346)||(14078034-14078137)
chr6 (244-346)||(14076393-14076495)
chr6 (251-346)||(17822028-17822124)
chr6 (256-328)||(17384038-17384110)
chr6 (256-343)||(4340664-4340751)
chr6 (272-346)||(19577563-19577637)
chr6 (255-346)||(22564558-22564649)
chr6 (255-346)||(24469795-24469886)
chr6 (256-342)||(1636635-1636720)
chr6 (280-346)||(19594010-19594076)
chr6 (245-346)||(22404253-22404354)
chr6 (257-342)||(22845862-22845947)
chr6 (266-346)||(21152511-21152591)
chr6 (256-330)||(14723697-14723771)
chr6 (246-346)||(9848160-9848260)
chr6 (255-346)||(24480021-24480112)
chr6 (245-330)||(21760406-21760491)
chr6 (258-346)||(23644329-23644417)
chr6 (255-346)||(2588293-2588384)
chr6 (259-330)||(11136931-11137002)
chr6 (256-332)||(9841030-9841106)
chr6 (266-346)||(17847777-17847857)
chr6 (255-346)||(20004188-20004280)
chr6 (245-337)||(21687128-21687220)
chr6 (245-346)||(8038049-8038150)
chr6 (266-346)||(21060424-21060504)
chr6 (291-346)||(8066649-8066704)
chr6 (271-346)||(9507295-9507370)
chr6 (309-346)||(21932471-21932508)
chr6 (305-346)||(22411462-22411503)
chr6 (256-316)||(21036957-21037017)
chr6 (258-346)||(23005258-23005346)
chr6 (255-307)||(26820896-26820948)
[»] chr8 (40 HSPs)
chr8 (241-346)||(13313266-13313371)
chr8 (255-346)||(15176441-15176532)
chr8 (255-346)||(17510901-17510992)
chr8 (255-346)||(18446868-18446959)
chr8 (260-346)||(24090892-24090978)
chr8 (246-346)||(19265819-19265919)
chr8 (246-346)||(19704983-19705083)
chr8 (246-346)||(20400331-20400431)
chr8 (256-346)||(26888483-26888573)
chr8 (246-346)||(29765391-29765492)
chr8 (246-346)||(24380353-24380453)
chr8 (246-342)||(24389757-24389853)
chr8 (266-342)||(24520022-24520098)
chr8 (266-346)||(24583191-24583271)
chr8 (244-346)||(28621601-28621703)
chr8 (246-346)||(23867829-23867929)
chr8 (258-346)||(30117670-30117758)
chr8 (246-346)||(6886665-6886767)
chr8 (255-346)||(26139785-26139876)
chr8 (246-343)||(37527026-37527123)
chr8 (246-346)||(29380960-29381061)
chr8 (246-346)||(14271838-14271938)
chr8 (246-346)||(22501830-22501930)
chr8 (246-302)||(25227300-25227356)
chr8 (246-346)||(25481505-25481605)
chr8 (255-346)||(17835540-17835631)
chr8 (303-346)||(24109091-24109134)
chr8 (255-346)||(26829475-26829566)
chr8 (260-335)||(34499236-34499311)
chr8 (258-344)||(18007535-18007620)
chr8 (245-346)||(4007150-4007251)
chr8 (266-327)||(17100226-17100287)
chr8 (251-294)||(11222342-11222385)
chr8 (246-301)||(21695413-21695468)
chr8 (291-346)||(28275359-28275414)
chr8 (303-346)||(30832936-30832979)
chr8 (251-301)||(15557409-15557459)
chr8 (246-336)||(21316790-21316880)
chr8 (246-346)||(25180721-25180821)
chr8 (255-307)||(24105525-24105577)
[»] chr7 (46 HSPs)
chr7 (253-346)||(5236873-5236966)
chr7 (244-346)||(23173683-23173785)
chr7 (253-346)||(8977477-8977570)
chr7 (244-346)||(26249073-26249175)
chr7 (246-346)||(9078881-9078982)
chr7 (246-346)||(3585522-3585622)
chr7 (246-346)||(13280756-13280856)
chr7 (246-346)||(18986744-18986844)
chr7 (246-346)||(19001372-19001472)
chr7 (256-346)||(11804695-11804785)
chr7 (256-346)||(4450668-4450758)
chr7 (256-346)||(8052439-8052528)
chr7 (246-343)||(19201458-19201555)
chr7 (245-346)||(23897237-23897338)
chr7 (246-346)||(9767782-9767882)
chr7 (246-346)||(10611710-10611810)
chr7 (281-346)||(144973-145038)
chr7 (246-339)||(39270273-39270365)
chr7 (246-346)||(2565903-2566003)
chr7 (246-330)||(2927887-2927971)
chr7 (246-338)||(10332409-10332501)
chr7 (266-346)||(14195745-14195825)
chr7 (246-346)||(19154815-19154915)
chr7 (246-346)||(20754214-20754314)
chr7 (255-346)||(23127903-23127994)
chr7 (280-346)||(10418554-10418620)
chr7 (253-346)||(6018355-6018448)
chr7 (252-337)||(6039303-6039388)
chr7 (281-346)||(11578674-11578739)
chr7 (256-346)||(3173707-3173797)
chr7 (256-346)||(9978282-9978372)
chr7 (263-349)||(21234097-21234183)
chr7 (245-298)||(10414278-10414331)
chr7 (246-342)||(7399329-7399424)
chr7 (246-346)||(13287710-13287810)
chr7 (256-316)||(19201332-19201392)
chr7 (251-346)||(21502851-21502947)
chr7 (255-346)||(3736333-3736424)
chr7 (255-346)||(6046524-6046615)
chr7 (255-322)||(16055265-16055332)
chr7 (255-333)||(3692769-3692847)
chr7 (256-346)||(9288907-9288997)
chr7 (256-346)||(9298699-9298789)
chr7 (255-344)||(21707346-21707436)
chr7 (253-346)||(1586188-1586281)
chr7 (98-147)||(1848753-1848802)
[»] chr5 (35 HSPs)
chr5 (244-346)||(19003763-19003865)
chr5 (246-346)||(20860336-20860436)
chr5 (246-346)||(23214825-23214925)
chr5 (256-346)||(25920828-25920918)
chr5 (252-346)||(34132083-34132177)
chr5 (273-346)||(23387574-23387647)
chr5 (246-342)||(19053102-19053198)
chr5 (255-346)||(18832219-18832310)
chr5 (257-346)||(17469569-17469658)
chr5 (245-346)||(29987953-29988055)
chr5 (255-346)||(22797429-22797520)
chr5 (245-346)||(26122379-26122480)
chr5 (255-346)||(24162020-24162111)
chr5 (255-330)||(25400747-25400822)
chr5 (256-346)||(19006858-19006948)
chr5 (256-346)||(28666489-28666579)
chr5 (251-307)||(15691304-15691360)
chr5 (246-330)||(24142420-24142504)
chr5 (246-294)||(32415830-32415878)
chr5 (255-329)||(24658308-24658383)
chr5 (245-294)||(20102892-20102941)
chr5 (245-346)||(20548452-20548553)
chr5 (245-346)||(26069246-26069347)
chr5 (246-306)||(23266853-23266913)
chr5 (242-301)||(19761577-19761636)
chr5 (255-294)||(20593222-20593261)
chr5 (254-333)||(23110204-23110283)
chr5 (290-329)||(24320566-24320605)
chr5 (291-346)||(24513231-24513286)
chr5 (245-284)||(28280342-28280381)
chr5 (252-346)||(26117434-26117528)
chr5 (305-346)||(16521962-16522003)
chr5 (256-349)||(29799038-29799131)
chr5 (254-294)||(20680628-20680668)
chr5 (246-346)||(31600075-31600175)
[»] scaffold0032 (1 HSPs)
scaffold0032 (241-342)||(92823-92924)
[»] chr3 (39 HSPs)
chr3 (246-346)||(18457111-18457211)
chr3 (246-346)||(34276437-34276537)
chr3 (245-330)||(19912593-19912678)
chr3 (257-345)||(8115305-8115393)
chr3 (246-346)||(12517287-12517387)
chr3 (255-346)||(8145245-8145336)
chr3 (251-346)||(22246994-22247088)
chr3 (245-346)||(22470401-22470502)
chr3 (255-346)||(25850957-25851048)
chr3 (257-346)||(14977803-14977892)
chr3 (245-346)||(16242193-16242293)
chr3 (255-346)||(27073949-27074040)
chr3 (256-346)||(8765671-8765761)
chr3 (256-346)||(8770561-8770651)
chr3 (245-346)||(16228343-16228444)
chr3 (245-346)||(18535767-18535868)
chr3 (266-346)||(3114729-3114809)
chr3 (246-298)||(26092950-26093002)
chr3 (255-330)||(12771211-12771286)
chr3 (255-345)||(20891654-20891744)
chr3 (297-346)||(20431469-20431518)
chr3 (246-346)||(27412658-27412759)
chr3 (246-346)||(1096761-1096860)
chr3 (258-330)||(12372344-12372416)
chr3 (246-346)||(19909029-19909129)
chr3 (255-346)||(819855-819946)
chr3 (251-346)||(19170146-19170241)
chr3 (255-338)||(52935542-52935625)
chr3 (292-346)||(13938892-13938946)
chr3 (252-324)||(2508725-2508797)
chr3 (251-346)||(3429229-3429324)
chr3 (246-346)||(7805739-7805839)
chr3 (246-330)||(20021817-20021901)
chr3 (290-328)||(2166078-2166116)
chr3 (266-324)||(19387879-19387937)
chr3 (305-346)||(8881460-8881501)
chr3 (245-346)||(19573575-19573675)
chr3 (251-284)||(51118485-51118518)
chr3 (246-306)||(27852603-27852663)
[»] chr2 (26 HSPs)
chr2 (246-346)||(17350975-17351075)
chr2 (258-346)||(18758298-18758386)
chr2 (256-345)||(28918186-28918275)
chr2 (246-346)||(17891728-17891828)
chr2 (255-346)||(24086315-24086406)
chr2 (257-346)||(35680111-35680200)
chr2 (251-346)||(18120550-18120645)
chr2 (255-346)||(27907531-27907622)
chr2 (246-346)||(25537553-25537653)
chr2 (245-340)||(23010042-23010137)
chr2 (255-346)||(25532233-25532324)
chr2 (245-330)||(21905739-21905824)
chr2 (258-346)||(28930271-28930360)
chr2 (246-346)||(25196608-25196708)
chr2 (246-330)||(26313191-26313275)
chr2 (244-294)||(23861134-23861184)
chr2 (269-346)||(22627381-22627458)
chr2 (245-346)||(26651636-26651737)
chr2 (246-346)||(34574510-34574611)
chr2 (245-301)||(16157083-16157139)
chr2 (255-330)||(27540274-27540349)
chr2 (251-301)||(29892232-29892282)
chr2 (245-330)||(20853094-20853179)
chr2 (245-330)||(29144647-29144733)
chr2 (98-147)||(28925059-28925108)
chr2 (266-346)||(20379283-20379363)
[»] chr1 (49 HSPs)
chr1 (246-346)||(15542308-15542408)
chr1 (251-342)||(28009747-28009838)
chr1 (261-346)||(16180715-16180799)
chr1 (255-346)||(729133-729224)
chr1 (255-330)||(12210278-12210353)
chr1 (245-346)||(21663089-21663190)
chr1 (245-346)||(22624613-22624714)
chr1 (246-346)||(26647357-26647456)
chr1 (246-347)||(22507381-22507483)
chr1 (261-330)||(15158803-15158872)
chr1 (246-346)||(18527496-18527596)
chr1 (246-346)||(21450764-21450864)
chr1 (256-346)||(16363620-16363710)
chr1 (244-346)||(26611329-26611431)
chr1 (245-346)||(22426514-22426615)
chr1 (245-338)||(24901214-24901307)
chr1 (258-327)||(27973319-27973388)
chr1 (258-346)||(18734597-18734685)
chr1 (267-346)||(12011205-12011284)
chr1 (245-329)||(14782544-14782628)
chr1 (246-346)||(16817108-16817208)
chr1 (246-346)||(18832212-18832312)
chr1 (246-330)||(25402435-25402519)
chr1 (246-296)||(10062960-10063010)
chr1 (256-346)||(15571698-15571788)
chr1 (245-346)||(22621791-22621891)
chr1 (245-301)||(26652616-26652672)
chr1 (246-346)||(35133881-35133981)
chr1 (291-346)||(9403631-9403686)
chr1 (255-346)||(18827393-18827484)
chr1 (255-330)||(20107867-20107942)
chr1 (291-346)||(26022392-26022447)
chr1 (256-306)||(11845231-11845281)
chr1 (251-345)||(16785606-16785700)
chr1 (246-346)||(16915195-16915296)
chr1 (245-346)||(21333070-21333171)
chr1 (246-294)||(17016814-17016862)
chr1 (256-296)||(26581620-26581660)
chr1 (255-294)||(21536915-21536954)
chr1 (255-346)||(22626163-22626254)
chr1 (291-336)||(22624911-22624956)
chr1 (253-346)||(27116230-27116323)
chr1 (244-296)||(7221563-7221615)
chr1 (246-330)||(13267855-13267939)
chr1 (258-346)||(16114797-16114885)
chr1 (246-286)||(20033118-20033158)
chr1 (266-346)||(21848623-21848703)
chr1 (244-284)||(24689296-24689336)
chr1 (246-346)||(25959459-25959559)
[»] scaffold0451 (2 HSPs)
scaffold0451 (255-346)||(5727-5818)
scaffold0451 (245-346)||(10092-10193)
[»] scaffold0016 (1 HSPs)
scaffold0016 (273-346)||(4821-4894)
[»] scaffold0014 (1 HSPs)
scaffold0014 (242-346)||(192119-192223)
[»] scaffold0555 (1 HSPs)
scaffold0555 (245-330)||(6466-6551)
[»] scaffold0024 (1 HSPs)
scaffold0024 (266-346)||(41336-41416)
[»] scaffold0019 (1 HSPs)
scaffold0019 (246-346)||(182511-182611)
[»] scaffold0258 (1 HSPs)
scaffold0258 (246-346)||(20252-20352)
[»] scaffold0043 (1 HSPs)
scaffold0043 (246-346)||(88436-88536)
[»] scaffold0111 (1 HSPs)
scaffold0111 (280-346)||(21437-21503)
[»] scaffold0005 (1 HSPs)
scaffold0005 (244-342)||(243829-243926)
[»] scaffold0056 (1 HSPs)
scaffold0056 (246-343)||(23036-23133)
[»] scaffold0386 (1 HSPs)
scaffold0386 (255-338)||(4881-4964)
[»] scaffold0002 (2 HSPs)
scaffold0002 (280-346)||(95621-95687)
scaffold0002 (257-294)||(369261-369298)
[»] scaffold0085 (1 HSPs)
scaffold0085 (251-290)||(24043-24082)
[»] scaffold0034 (1 HSPs)
scaffold0034 (101-147)||(75941-75987)
[»] scaffold0637 (1 HSPs)
scaffold0637 (246-306)||(7423-7483)
[»] scaffold0086 (1 HSPs)
scaffold0086 (318-346)||(12858-12886)


Alignment Details
Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 18 - 346
Target Start/End: Complemental strand, 18751161 - 18750821
Alignment:
Q  18 gttgtgtcgcatgcttcctggaagtttgtcagattagcttgtagtcttttgactccttacttgaaaattggtta------------ttcaacacactatt 105  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||            ||||||||||||||    
T  18751161 gttgtgccgcatgcttcctggaagtttgtcagattagcttgtagtcttttgactccttacttaaaaattggttagcctttaaagtattcaacacactatt 18751062  T
Q  106 cttgatatcaaacaccaatgggtttgctggttggaacccaagaaagacttcacccaaggttttcaacattttatagtctcctagagtctcttagagtgat 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18751061 cttgatatcaaacaccaatgggtttgctggttggaatccaagaaagacttcacccaaggttttcaacattttatagtctcctagagtctcttagagtgat 18750962  T
Q  206 gtgaggattttcttctctcattatgacttgtttgagtagttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggttt 305  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18750961 gtgaggattttcttctctcattatgacttgtttgagtagttgatgacatgtcatcttacattatttttagcatatttttcagttattttcagtagggttt 18750862  T
Q  306 agcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18750861 agcagcaaaaaggaggagtattagagcaattgcctatgatt 18750821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 15166565 - 15166465
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||||| | ||||||| ||||    
T  15166565 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggttttagcagcaaaaacgaggagtattagaacgattgcctgtgat 15166466  T
Q  346 t 346  Q
    |    
T  15166465 t 15166465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 346
Target Start/End: Complemental strand, 7583876 - 7583789
Alignment:
Q  259 tcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||| ||||| ||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  7583876 tcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatgatt 7583789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 17335355 - 17335455
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| ||||| || |||| ||||||||| |||||||||| | ||||| |||||||||||||||||||||| | ||||||||||||    
T  17335355 tgatgacatgtcatcttacgttattcttggcatgtttttcagtcattttcagtaagttttagaagcaaaaaggaggagtattagaacgattgcctatgat 17335454  T
Q  346 t 346  Q
    |    
T  17335455 t 17335455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 22171845 - 22171745
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||||||||| ||||||| |||||| | |||||||| |||| ||||||||||||||||||||||||||||   ||||||||||||    
T  22171845 tgatgacaggtcatcttacattattcttagcatgtttttctgctattttcattaggttttagcagcaaaaaggaggagtattagaatgattgcctatgat 22171746  T
Q  346 t 346  Q
    |    
T  22171745 t 22171745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 346
Target Start/End: Complemental strand, 10106381 - 10106292
Alignment:
Q  257 catcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||| ||||||| |||||| || |||||||||||| |||||| ||||||||||||||||||| | |||||| ||||||||    
T  10106381 catcttacattattcttagcatgtttttctgtcattttcagtaggttttagctgcaaaaaggaggagtattacaacaattgtctatgatt 10106292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 9536775 - 9536855
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||    
T  9536775 ttattcttagcatgtttttcaattattttcagtaggttttagcagcaaaaaggaggagtattacaacaattacctatgatt 9536855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 12616811 - 12616711
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| | ||| ||| ||| |||||||||  ||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||    
T  12616811 tgatgacatgtcatcttacgtaattcttaacatgtttttcagtctttttcagtaggttttagcagcaaaaaggatgagtattagaacaatttcctatgat 12616712  T
Q  346 t 346  Q
    |    
T  12616711 t 12616711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 17711388 - 17711307
Alignment:
Q  261 ttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||||||||| ||||||| ||||| ||| |||||||||||| |||||| ||||||| ||||||||||||| | |||||||||    
T  17711388 ttacattattcttagcatgttttttagtcattttcagtaggttttagctgcaaaaatgaggagtattagaacgattgcctat 17711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 11252129 - 11252229
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||||||||||| ||||||||||  ||| |||||| |||||||  |||||  |||||||||||| | ||||||||||||    
T  11252129 tgatgacaggtcatcttacgttatttttagcatgtttttcagtttattttagtaggatttagcaaaaaaaaaaaggagtattagaacgattgcctatgat 11252228  T
Q  346 t 346  Q
    |    
T  11252229 t 11252229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 25025203 - 25025103
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||||| ||||| |||||| |||| ||||||||   ||||| ||||| |||||||||||||||    
T  25025203 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacaaaggagcattagtgcaattgcctatgat 25025104  T
Q  346 t 346  Q
    |    
T  25025103 t 25025103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 8968076 - 8968142
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaag 317  Q
    |||||||||||||| ||||| ||||||| ||||||||| ||||| |||||| |||||||||||||||    
T  8968076 acatgtcatcttacgttattcttagcatgtttttcagtcattttaagtaggttttagcagcaaaaag 8968142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 342
Target Start/End: Complemental strand, 14573547 - 14573450
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||||| |||| ||||||||| ||||| ||||||||||||| ||| ||||| |||||| ||||  |||||||  |||||||||||||||||||| ||||    
T  14573547 gttgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtattagagcaattgtctat 14573450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 9849707 - 9849807
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| |||| || ||||||||| ||||| |||||| |||| || |||||   |||||||||||| ||||||||||||||    
T  9849707 tgatgacaggtcatcttacgttattcttagtatgtttttcagtcatttttagtaggttttaccaacaaaacaaaggagtattagatcaattgcctatgat 9849806  T
Q  346 t 346  Q
    |    
T  9849807 t 9849807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 19603901 - 19603957
Alignment:
Q  290 attttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  19603901 attttcagtaggttttagtagcaaaaaggaggagtattagagcaattgtctaagatt 19603957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 17108774 - 17108715
Alignment:
Q  287 gttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||  ||||||||||||||    
T  17108774 gttattttcagtaggttttaacagcaaaaaggatgagtattagaaaaattgcctatgatt 17108715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 8928312 - 8928361
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  8928312 ttgatgacatgtcatcttacgttatttttagcatatttttcagtcatttt 8928361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 270 - 346
Target Start/End: Complemental strand, 10432251 - 10432175
Alignment:
Q  270 ttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||| |||| ||||||||||||||| | |||| || ||||||||||| ||||||||||||| | |||| ||||||||    
T  10432251 tttttgcatgtttttcagttattttaattaggtttcagcagcaaaaatgaggagtattagaactattgtctatgatt 10432175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 16928993 - 16928937
Alignment:
Q  274 agcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| ||||||||| |||||||||||| |||||| ||||||| |||||||||||||    
T  16928993 agcatgtttttcagtcattttcagtaggttttagcggcaaaaatgaggagtattaga 16928937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 17218616 - 17218529
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||||||||| ||||| ||||||| ||||||||| | || ||||| | ||| | |||||||||||||||||||||| | ||||||||||    
T  17218616 gtcatcttacgttattcttagcatgtttttcagtcaatt-cagtaagttttcgaagcaaaaaggaggagtattagaacgattgcctatg 17218529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 17434531 - 17434431
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||||||||||| ||||| ||| |||||||||||| ||||   ||  ||  ||||||||||||| ||||||| ||||||    
T  17434531 tgatgacaggtcatcttacgttatttttagcatgtttttaagtcattttcagtaggttttaattgcggaatagaggagtattagatcaattgcttatgat 17434432  T
Q  346 t 346  Q
    |    
T  17434431 t 17434431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 19556541 - 19556639
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| |||| |||| ||||||| |||| ||||||| ||| |||| ||||||||||| | ||||||||||||    
T  19556541 tgatgacaggtcatcttacgttattcttagcatgtttt-cagtcattttcaataggttttagcaccaataagg-ggagtattagaacgattgcctatgat 19556638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 346
Target Start/End: Original strand, 20828152 - 20828239
Alignment:
Q  259 tcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||| ||||| ||||||| |||||||||  |||||| ||||  ||||||||||||   |||||||||| | |||||||||||||||    
T  20828152 tcttacgttattcttagcatctttttcagtctttttcaataggtattagcagcaaaataaaggagtattacaacaattgcctatgatt 20828239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 342
Target Start/End: Original strand, 22350250 - 22350336
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    ||||||||||||||| ||||||| ||||||||||  ||| |||||| |||| |||||||   || |||||||||| |||||| ||||    
T  22350250 tcatcttacattattcttagcatgtttttcagtttattttagtaggttttaccagcaaaccagaagagtattagatcaattgtctat 22350336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 9263362 - 9263446
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    ||||||| ||||||||||||| ||||||||| |  |||| |||| |||| ||||| ||  ||||||||||||| |||||| ||||    
T  9263362 atcttacgttatttttagcatgtttttcagtcaaattcaataggttttatcagcagaactgaggagtattagaacaattgtctat 9263446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 10236653 - 10236586
Alignment:
Q  279 atttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| | |||||||||| |||| ||||||| | || ||||||| || |||||||||||||||    
T  10236653 atttttcagtcaatttcagtaggttttaccagcaaagaagaagagtatttgatcaattgcctatgatt 10236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 12289165 - 12289208
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||    
T  12289165 acatgtcatattacattatttttaacatatttttcagtcatttt 12289208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 25096394 - 25096297
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| || || ||||||| |||| |||| ||||||||||||   | |||||||||    ||||||||||| | ||||||||||||    
T  25096394 tgatgacatgtcatcttacgttgttcttagcatgttttacagtaattttcagtaggaaattgcagcaaaa---tggagtattagaacgattgcctatgat 25096298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 9519819 - 9519729
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  9519819 tcatcttacgttatttttagcatgttttttagttattttcagtagtatttagcagcaaaaaggaggagtattagagcaattgcctatgatt 9519729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 14641717 - 14641629
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  14641717 atcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattacctatgatt 14641629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 14078137 - 14078034
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttatttt-cagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||||| ||| |||||||||||||||| |||||||  |||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  14078137 gttgatgacaggtcatcttacattattcttagcatggtttttagttatttttcagtaggatttagcagcaaagaggaggagtattagagcaattgcctat 14078038  T
Q  343 gatt 346  Q
    ||||    
T  14078037 gatt 14078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 14076495 - 14076393
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||||| ||| |||||||||| ||||| |||||||  ||||||||||||||||||| | |||||||||||| |||||||||||||||| |||||||||||    
T  14076495 gttgatgacaggtcatcttacgttattcttagcatggttttcagttattttcagtatgatttagcagcaaagaggaggagtattagagaaattgcctatg 14076396  T
Q  344 att 346  Q
    |||    
T  14076395 att 14076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 17822028 - 17822124
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttc-agttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||| | |||||||||||||    
T  17822028 acatgtcatcttacgttattcttagcatgtttttctagttattttcaataggatttagcagcaaaaaggaggagtattagaacgattgcctatgatt 17822124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 17384110 - 17384038
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtatta 328  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  17384110 tcatcttacattattcttagcatgtttttcagttattttcattaggttttagcagcaaaaaggaggagtatta 17384038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 4340751 - 4340664
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    ||||||||| |||||||||| || |||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||    
T  4340751 tcatcttacgttatttttagtatgtttttcagatattttcagtaggttttagcagtaaaaaggaggagtattaaagcaatttcctatg 4340664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 19577563 - 19577637
Alignment:
Q  272 ttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  19577563 ttagcatgttttttagttattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 19577637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 22564558 - 22564649
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| ||||||||| ||||| |||||| |||| ||||||||  ||||||||||||||||||||||| |||||    
T  22564558 gtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcaattgcctgtgatt 22564649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 24469886 - 24469795
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| |||||||||| || ||||||| | |||||||||||| |||  ||||||||||||||||||||||| | |||||||||||||    
T  24469886 gtcatcttacgttatttttagtatgtttttcaatcattttcagtaggttttgacagcaaaaaggaggagtattagaacgattgcctatgatt 24469795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 342
Target Start/End: Complemental strand, 1636720 - 1636635
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    ||||||||| ||||| ||||||| ||||||||||||||| |||||| |||||| |||||||||| |||||||||| |||||||||||    
T  1636720 tcatcttacgttattcttagcatgtttttcagttatttttagtaggttttagcggcaaaaagga-gagtattagaacaattgcctat 1636635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 19594010 - 19594076
Alignment:
Q  280 tttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  19594010 ttttttagttattttcagtaggttttagctgcaaaaaggaggagtattagaacaattgcctatgatt 19594076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 22404253 - 22404354
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| |||||||||||| | ||||| ||| ||| ||||||||| | |||||||||| |||||||||||||||||||||||||| | | |||| ||||||    
T  22404253 ttgatgacatgtcatctttcgttattcttatcatgtttttcagtaaatttcagtaggttttagcagcaaaaaggaggagtattaaaacgattgtctatga 22404352  T
Q  345 tt 346  Q
    ||    
T  22404353 tt 22404354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 22845862 - 22845947
Alignment:
Q  257 catcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||||||| ||| | ||||||| |||||||||||||||||||| | |||| || |||||||||||||||||||| |||||||||||    
T  22845862 catcttacgttactcttagcatgtttttcagttattttcagtatgttttaacaacaaaaaggaggagtattagaacaattgcctat 22845947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 21152511 - 21152591
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||| ||||||| ||||||| |||||| || ||||||||||||||||||||||||| | |||| ||||||||    
T  21152511 ttatttttagcatgtttttcaattatttttagtaggattaagcagcaaaaaggaggagtattagaacgattgtctatgatt 21152591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 14723771 - 14723697
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||||||| ||||| |||||||  |||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  14723771 tcatcttacgttattcttagcatgcttttcagttattttcaataggatttaggagcaaaaaggaggagtattaga 14723697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 9848260 - 9848160
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||||||||| | || ||||| ||| ||| ||||||||| ||||| |||||| ||||  ||||||||||| |||||||||||||||| ||||||||    
T  9848260 tgatgacatgtcatttgacgttattcttaacatgtttttcagtcatttttagtaggttttattagcaaaaaggatgagtattagagcaatttcctatgat 9848161  T
Q  346 t 346  Q
    |    
T  9848160 t 9848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 24480112 - 24480021
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| | ||||| | |||||||||||| ||| ||||||||||||||||||||| || | |||| ||||||||    
T  24480112 gtcatcttacgttattcttagcatgtatttcaatcattttcagtaggttttggcagcaaaaaggaggagtattggaacgattgtctatgatt 24480021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 21760406 - 21760491
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| ||| |||| ||||  ||||| ||||||||||||||||| ||||||| |||  |||||||||||||||||||| |||||||    
T  21760406 ttgatgacaggtcaccttaagttattcttagcatatttttcagtcattttcaatagaatttagcagcaaaaaggaggattattaga 21760491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 23644329 - 23644417
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| ||||| ||||||| ||||||| || |||| |||||| |||| ||||||||   |||||||||||| |||||||||||||||    
T  23644329 atcttacgttattcttagcatgtttttcaattgtttttagtaggttttaccagcaaaacataggagtattagatcaattgcctatgatt 23644417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 2588384 - 2588293
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| || |||||||||||||||||||| ||||||| | || |||| || || ||| || |||||||||| |||||| ||||||||    
T  2588384 gtcatcttacgttgtttttagcatatttttcagtcattttcaattggttttaccaacataaaagatgagtattagaacaattgtctatgatt 2588293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 330
Target Start/End: Complemental strand, 11137002 - 11136931
Alignment:
Q  259 tcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||||||||||| ||||||| ||||||||||  ||| |||||| ||||| |||||||||||||| |||||||    
T  11137002 tcttacattattcttagcatgtttttcagtttattttagtaggatttagtagcaaaaaggaggattattaga 11136931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 332
Target Start/End: Complemental strand, 9841106 - 9841030
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagc 332  Q
    ||||||||| ||||| ||| ||| | ||| ||| |||||||||||| |||| ||||| |||||||||||||||||||    
T  9841106 tcatcttacgttattcttaacatgtgttttagtcattttcagtaggttttaccagcagaaaggaggagtattagagc 9841030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 17847857 - 17847777
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||| ||||| ||||||||| |||| | |||||||||||||| || |||||||||| | |||| ||||||||    
T  17847857 ttattcttagcatgttttttagttattttaagtaagttttagcagcaaaaatgaagagtattagaacgattgtctatgatt 17847777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 20004188 - 20004280
Alignment:
Q  255 gtcatcttacattatttttagcat-atttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| |||||||||||  ||| |||||| ||||| |||||||| ||||||| ||||  | |||||||||||||    
T  20004188 gtcatcttacgttattgttagcatgatttttcagtttattttagtaggatttagtagcaaaaaagaggagtgttagcacgattgcctatgatt 20004280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 337
Target Start/End: Original strand, 21687128 - 21687220
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattg 337  Q
    ||||| |||||||||||||| ||||| ||||||| ||||||||| | ||| |||||| |||| ||||||||  || ||||| |||| ||||||    
T  21687128 ttgatgacatgtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaaacagaagagtaatagatcaattg 21687220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 8038049 - 8038150
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||| ||||| ||||| | ||||||| |  |||||| || | | || |||||| ||||||||||||||||| || |||||||||    
T  8038049 ttgatgacaggtcatcttacgttattcttagcctgtttttcaatctttttcactaagttataccagcaataaggaggagtattagagaaactgcctatga 8038148  T
Q  345 tt 346  Q
    ||    
T  8038149 tt 8038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 21060424 - 21060504
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||| |||||| ||||||||| ||||||| |||| ||||  | |||||  ||||||||||||| ||||||| |||||||    
T  21060424 ttatttctagcatgtttttcagtcattttcaataggttttaaaaccaaaatagaggagtattagatcaattgcatatgatt 21060504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 8066704 - 8066649
Alignment:
Q  291 ttttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||  ||||||||||||||||| ||||||||||  ||||| ||||||||    
T  8066704 ttttcagtagattttagcagcaaaaaggaagagtattagaataattgtctatgatt 8066649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 9507295 - 9507370
Alignment:
Q  271 tttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||| ||||||||||||| |||||||||||| |||| ||| | ||  | ||||||||||| ||||||| |||||||    
T  9507295 tttaacatatttttcagtcattttcagtaggttttaccagtagaacaggggagtattagaacaattgcttatgatt 9507370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 21932508 - 21932471
Alignment:
Q  309 agcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  21932508 agcaaaaaggaggagtattagagaaattgtctatgatt 21932471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 22411462 - 22411503
Alignment:
Q  305 tagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||||||||||||| | |||||| ||||||||    
T  22411462 tagcagcaaaaaggaggagtattataacaattgtctatgatt 22411503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 21037017 - 21036957
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaa 316  Q
    ||||||||| | ||| ||| ||| ||||||||||||||| |||||| ||||||| ||||||    
T  21037017 tcatcttacgtcattcttatcatgtttttcagttatttttagtaggttttagcaacaaaaa 21036957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 23005258 - 23005346
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||| ||||||| |||| | |||  ||| ||||||   |||||  |||||||||||| |||||| | |||||||||||||    
T  23005258 atcttacattattcttagcatgttttcctgtttattttagtaggaaatagcacaaaaaaggaggagcattagaacgattgcctatgatt 23005346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 26820948 - 26820896
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttag 307  Q
    |||||||||| ||| | ||||||| ||||||||||||||||| |||| |||||    
T  26820948 gtcatcttacgttactcttagcatgtttttcagttattttcattaggttttag 26820896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 13313266 - 13313371
Alignment:
Q  241 gtagttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcct 340  Q
    |||| |||| ||||||| |||||| ||||| ||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||    
T  13313266 gtagatgatgacatgtcgtcttacgttattcttagcatgtttttcagtcattttcaataggttttagcagcaaaaaggaggagtattagaacaattgcct 13313365  T
Q  341 atgatt 346  Q
    ||||||    
T  13313366 atgatt 13313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 15176441 - 15176532
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||||| ||||||| | ||||||| | |||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  15176441 gtcatcttacattattcttagcatgtgtttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 15176532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 17510992 - 17510901
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||||| ||||||| ||||||||| | |||||||||| |||||| ||||||||||||||||||||| | |||||||||||||    
T  17510992 gtcatcttacattattcttagcatgtttttcagtcactttcagtaggttttagctgcaaaaaggaggagtattagaacgattgcctatgatt 17510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 18446868 - 18446959
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| | ||| |||||||||    
T  18446868 gtcatcttacgttatttttaccatgtttttcagttatttccagtaggatttagcagcaaaaaggaggagtattagaaccatttcctatgatt 18446959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 24090892 - 24090978
Alignment:
Q  260 cttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||| ||||||| ||||||||||||||| | |||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  24090892 cttacgttattcttagcatgtttttcagttattttaattaggttttagcagcaaaaaggaagagtattagaacaattgcctatgatt 24090978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 19265919 - 19265819
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||||||  ||| |||||| |||| || |||||||||||||||||||| ||||||||||||||    
T  19265919 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttaacaacaaaaaggaggagtattagaacaattgcctatgat 19265820  T
Q  346 t 346  Q
    |    
T  19265819 t 19265819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 19705083 - 19704983
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| ||||| |||| || ||||||||| |||||||||||| |||| ||||| |||| |||||||||||| | ||||||||||||    
T  19705083 tgatgacatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaggttttaacagcataaagaaggagtattagaacgattgcctatgat 19704984  T
Q  346 t 346  Q
    |    
T  19704983 t 19704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 20400431 - 20400331
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| |||||||  |||||||| ||||||||| || |||||||||||||||||||||||||||| | ||| ||||||||    
T  20400431 tgatgacaggtcatcttacgttattcttagcatgcttttcagtcattttcagtgggttttagcagcaaaaaggaggagtattagaacgatttcctatgat 20400332  T
Q  346 t 346  Q
    |    
T  20400331 t 20400331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 26888573 - 26888483
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||| |||| ||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||| || | |||| ||||||||    
T  26888573 tcattttacgttatttttagcatatttttcatttatttttagtaggttttagcaacaaaaaggaggagtattggaacgattgtctatgatt 26888483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 29765391 - 29765492
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttc-agttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| ||| |||||||||| ||||| ||||||| |||||  |||||||||||||||| ||||||||||||||||| | |||||||| | |||||||||||    
T  29765391 tgatgacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttagcagcaaaaaggaagtgtattagaacgattgcctatga 29765490  T
Q  345 tt 346  Q
    ||    
T  29765491 tt 29765492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 24380353 - 24380453
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| ||||| ||||||| ||||||| | | |||||||||| |||| ||||| ||  ||||||||||||| ||||||||||||||    
T  24380353 tgataacatgtcatcttacgttattcttagcatgtttttcactcaatttcagtaggttttaccagcagaacagaggagtattagaacaattgcctatgat 24380452  T
Q  346 t 346  Q
    |    
T  24380453 t 24380453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 24389853 - 24389757
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||| ||| |||||||||| ||||| |||| |  ||||| |||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||||    
T  24389853 tgatgacaggtcatcttacgttattcttagtaagttttttagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattgcctat 24389757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 24520022 - 24520098
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    ||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||  ||||||||| |||||||||||    
T  24520022 ttattcttagcatgtttttcagttattttcagtaggatttagtagcaaaaaggataagtattagaacaattgcctat 24520098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 24583191 - 24583271
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||| ||||||||| ||||| |||||  |||||||||||||||||||||||||||| | |||||||||||||    
T  24583191 ttattcttagcatgtttttcagtcatttttagtagattttagcagcaaaaaggaggagtattagaacgattgcctatgatt 24583271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 28621703 - 28621601
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||||| ||| ||||||| || ||||| ||||||| ||||||||||||||||| |||| |||||||  |||||| | |||||||||| | ||||||||||    
T  28621703 gttgatgacaggtcatctaacgttattcttagcatgtttttcagttattttcattaggttttagcataaaaaagaatgagtattagaacgattgcctatg 28621604  T
Q  344 att 346  Q
    |||    
T  28621603 att 28621601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 23867829 - 23867929
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| | ||| |||| || ||||||||  ||||| |||||| |||||||||||| | ||||||||||||| | ||||||||||||    
T  23867829 tgatgacaggtcatcttacgtaattcttagtatgtttttcaggcatttttagtaggttttagcagcaaagacgaggagtattagaacgattgcctatgat 23867928  T
Q  346 t 346  Q
    |    
T  23867929 t 23867929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 30117670 - 30117758
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| ||||||||||||| ||||||| | |||||||||||| |||| ||||||||   |||| |||||||| ||||| ||||||||    
T  30117670 atcttacgttatttttagcatgtttttcattcattttcagtaggttttaccagcaaaacataggaatattagagaaattgtctatgatt 30117758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 6886767 - 6886665
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcag--ttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||||  || |||| |||||| |||| || |||||  |||||||||||||| |||||||||||    
T  6886767 tgatgacaagtcatcttacgttattcttagcatgtttttcagacttttttttagtaggttttaccatcaaaatagaggagtattagagtaattgcctatg 6886668  T
Q  344 att 346  Q
    |||    
T  6886667 att 6886665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 26139876 - 26139785
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| ||||||| ||  ||| ||||||   ||||| |||||||||||||||||||| | |||||||||||||    
T  26139876 gtcatcttacgttattcttagcatgtttttcaatttattttagtaggaaatagcatcaaaaaggaggagtattagaacgattgcctatgatt 26139785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 37527026 - 37527123
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagt-tattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||| |||| ||||||||| ||||||||| ||| ||||||||| |||||| |||||| |||| |||||||   || |||||||||||||||||||||||    
T  37527026 tgatgacatatcatcttaccttatttttaacatttttttcagtctatttt-agtaggttttaccagcaaactagatgagtattagagcaattgcctatg 37527123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 29380960 - 29381061
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagtt-attttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| ||| |||||||||| ||||| ||||||| |||||   || | ||||| |||| ||||| |||||||||||||||||||||| | |||||||||||    
T  29380960 tgatgacaggtcatcttacgttattcttagcatgtttttttattcaatttcaataggttttagtagcaaaaaggaggagtattagaacgattgcctatga 29381059  T
Q  345 tt 346  Q
    ||    
T  29381060 tt 29381061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 14271938 - 14271838
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| |||||||    ||||||||||| ||||  |||||||   ||||||||||||| |||||||||||||    
T  14271938 tgatgacaggtcatcttacgttattcttagcatgtttttcaacctttttcagtaggttttactagcaaaacaaaggagtattagagtaattgcctatgat 14271839  T
Q  346 t 346  Q
    |    
T  14271838 t 14271838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 22501930 - 22501830
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||| ||||||||| ||||| ||| ||| ||||||| |  |||||||| || |||| ||||||||  |||||||||||||| ||| |||||||||    
T  22501930 tgatgacatatcatcttacgttattcttatcatgtttttcaatctttttcagttggttttaccagcaaaacagaggagtattagagtaatcgcctatgat 22501831  T
Q  346 t 346  Q
    |    
T  22501830 t 22501830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 25227356 - 25227300
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtaggg 302  Q
    |||| ||| |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  25227356 tgatgacaggtcatcttacattattcttagcaggtttttcagttattttcagtaggg 25227300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 25481505 - 25481605
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| |||||||  ||| || ||| ||| ||||||   ||||||||||| |||||||||||||| | ||||||||||||    
T  25481505 tgatgacaggtcatcttacgttattcttagcatgctttacaattaattttagtaggaaatagcagcaaaatggaggagtattagaacgattgcctatgat 25481604  T
Q  346 t 346  Q
    |    
T  25481605 t 25481605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 17835631 - 17835540
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| |||| |||||||||||||| |||||||||| ||||  |||| ||  | ||||||||||| ||||| | |||||||    
T  17835631 gtcatcttacgttattcttagtatatttttcagttaatttcagtaggttttacaagcagaatagtggagtattagaacaatttcttatgatt 17835540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 24109091 - 24109134
Alignment:
Q  303 tttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  24109091 tttagcagcaaaaagaaggagtattagagcaatttcctatgatt 24109134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 26829475 - 26829566
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| |||||||||  |||| ||||||   ||||| ||||| ||||||||| |||| | |||||||||||||    
T  26829475 gtcatcttacgttattcttagcatgtttttcagtattttttagtaggaaatagcaacaaaatggaggagtaatagaacgattgcctatgatt 26829566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 34499311 - 34499236
Alignment:
Q  260 cttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaat 335  Q
    ||||| ||||||||||||| | ||||||| ||||| | |||  |||| |||||||||||| |||||||||||||||    
T  34499311 cttacgttatttttagcatgtctttcagtcatttttattagattttaccagcaaaaaggatgagtattagagcaat 34499236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 18007620 - 18007535
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||||| |||| || ||||| || ||| ||||||| |||||| ||||||    
T  18007620 atcttacgttattgttagcat-tttttcagtcattttcagtaggttttaccaacaaaatggtggaatattagaacaattgtctatga 18007535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 4007150 - 4007251
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||  ||| | ||||||| ||||||||| ||||| |||||| || | ||||||||  ||||||||||||| |||||| | ||||    
T  4007150 ttgatgacaggtcatcttatgttaatattagcatgtttttcagtcatttttagtaggtttcaccagcaaaatagaggagtattagatcaattgtcaatga 4007249  T
Q  345 tt 346  Q
    ||    
T  4007250 tt 4007251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 17100226 - 17100287
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtatt 327  Q
    ||||| ||||||| ||||||| |||||||||  ||| |||||||||||||||||| ||||||    
T  17100226 ttattcttagcatgtttttcaattattttcataaggttttagcagcaaaaaggagaagtatt 17100287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 11222385 - 11222342
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    |||||||||||||||||||||| | ||||||||||||| |||||    
T  11222385 acatgtcatcttacattattttcaacatatttttcagtcatttt 11222342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 21695413 - 21695468
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagg 301  Q
    |||| |||||||||||||| ||||| ||||||| ||||||||| | ||||||||||    
T  21695413 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaatttcagtagg 21695468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 28275359 - 28275414
Alignment:
Q  291 ttttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||| |||| ||| ||||  |||||||||||||| ||||||||||||||    
T  28275359 ttttcagtaggttttaccaggaaaacagaggagtattagagtaattgcctatgatt 28275414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 30832979 - 30832936
Alignment:
Q  303 tttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||    
T  30832979 tttagaagcaaaaagaaggagtattagagcaattgtctatgatt 30832936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 15557459 - 15557409
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagg 301  Q
    |||||||||||||||||||| ||||  | ||||||||| ||||||||||||    
T  15557459 acatgtcatcttacattattcttagtctgtttttcagtcattttcagtagg 15557409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 21316880 - 21316790
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaatt 336  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||| || |||| |||||   | |||||||||| || ||||||||||| |||||    
T  21316880 tgatgacaggtcatcttacgttattcttagcatgtttttcaattctttttagtagttctaagcagcaaaatggcggagtattagaacaatt 21316790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 25180721 - 25180821
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagt-tattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| |||||||||||||| ||||  ||| ||| ||||||||| ||| ||| ||||| |||| ||| |||   ||||||||||||| |||||||||||||    
T  25180721 tgatgacatgtcatcttacgttatccttaacatgtttttcagtctatgttc-gtaggttttaccaggaaaccagaggagtattagatcaattgcctatga 25180819  T
Q  345 tt 346  Q
    ||    
T  25180820 tt 25180821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 24105525 - 24105577
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttag 307  Q
    |||||||||| ||||  ||||||| ||||||||||||| |||||||| |||||    
T  24105525 gtcatcttacgttatgcttagcatgtttttcagttattctcagtaggatttag 24105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 5236873 - 5236966
Alignment:
Q  253 atgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| |||||||||    
T  5236873 atgtcatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggaggattagaacaatttcctatgatt 5236966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 23173683 - 23173785
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||||| |||||||||||||| ||||| ||||||| ||||||||||||||| | |||| |||||| ||||||||||||||||||||| |||||| |||||    
T  23173683 gttgatgacatgtcatcttacgttattcttagcatgtttttcagttatttttaataggttttagctgcaaaaaggaggagtattagaacaattgtctatg 23173782  T
Q  344 att 346  Q
    |||    
T  23173783 att 23173785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 8977477 - 8977570
Alignment:
Q  253 atgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||| ||||| ||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  8977477 atgtcatcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaactgcctatgatt 8977570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 26249073 - 26249175
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||||| ||| |||||||||| |||||  |||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||||  ||||    
T  26249073 gttgatgacaggtcatcttacgttattcatagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgtttatg 26249172  T
Q  344 att 346  Q
    |||    
T  26249173 att 26249175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 9078881 - 9078982
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttt-tcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| |||||||||||||| ||||| ||||||| |||| |||||||||||||||||| || |||||||||||||||||||||| || | |||| ||||||    
T  9078881 tgatgacatgtcatcttacgttattcttagcatgttttttcagttattttcagtaggtttcagcagcaaaaaggaggagtattggaacgattgtctatga 9078980  T
Q  345 tt 346  Q
    ||    
T  9078981 tt 9078982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 3585522 - 3585622
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||||||||| ||||||| ||||||| | |||||||||||| ||||||||||||| |||||||||||| |   ||||||||||||    
T  3585522 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 3585621  T
Q  346 t 346  Q
    |    
T  3585622 t 3585622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 13280856 - 13280756
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| ||||| ||||||| ||||||| ||| |||||||||| ||||||||||||||| | ||||||||||   ||||||||||||    
T  13280856 tgatgacatgtcatcttacgttattcttagcatgtttttcaattaatttcagtaggttttagcagcaaaaagaacgagtattagaatgattgcctatgat 13280757  T
Q  346 t 346  Q
    |    
T  13280756 t 13280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 18986744 - 18986844
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||| ||||||||| ||||| ||||||| ||||||||| | |||||||||  |||||||||||||||||||||||||||| | | ||||||||||    
T  18986744 tgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgcctatgat 18986843  T
Q  346 t 346  Q
    |    
T  18986844 t 18986844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 19001372 - 19001472
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||| ||||||||| ||||| ||||||| ||||||||| | |||||||||  |||||||||||||||||||||||||||| | | ||||||||||    
T  19001372 tgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgcctatgat 19001471  T
Q  346 t 346  Q
    |    
T  19001472 t 19001472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 11804785 - 11804695
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| |||||  || ||| ||||||||| |||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||    
T  11804785 tcatcttacgttattcataacatgtttttcagtcattttcagtaggttttagcagcaaaaaggagcagtattagaacgattgcctatgatt 11804695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 4450758 - 4450668
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| ||||| ||||||| |||| |||| |||||||||||| ||||||| ||||| |||||||||||||| | ||||||| |||||    
T  4450758 tcatcttacgttattcttagcatgttttccagtcattttcagtaggttttagcaacaaaatggaggagtattagaacgattgcctgtgatt 4450668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 8052439 - 8052528
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| ||||| ||||||| |||| |||| |||||||||||| |||||||||||||| |||||||||||||   |||||||||||||    
T  8052439 tcatcttacgttattcttagcatgtttt-cagtcattttcagtaggttttagcagcaaaaatgaggagtattagaatgattgcctatgatt 8052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 19201555 - 19201458
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||| ||| |||||||||  ||||| ||| ||| |||||| ||||||||||||||| |||||||||||||||| ||| ||||||| | ||||||||||    
T  19201555 tgatgacaggtcatcttatgttattcttaacatgtttttctgttattttcagtaggatttagcagcaaaaaggtggactattagaacgattgcctatg 19201458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 23897338 - 23897237
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| |||||||||||||||||||| ||| ||| ||||||||| | ||| |||| | |||| ||||||||  ||||||||||| | |||||||||||||    
T  23897338 ttgatgacatgtcatcttacattattcttaacatgtttttcagtcaattttagtatgttttaccagcaaaacagaggagtattatatcaattgcctatga 23897239  T
Q  345 tt 346  Q
    ||    
T  23897238 tt 23897237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 9767882 - 9767782
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| ||||||| || ||||| ||||||| ||||||||  |||||||||||| |||| ||| ||||  ||||||||||||| ||||||||||||||    
T  9767882 tgatgacaggtcatctcacgttattcttagcatgtttttcagccattttcagtaggttttaccagaaaaatagaggagtattagatcaattgcctatgat 9767783  T
Q  346 t 346  Q
    |    
T  9767782 t 9767782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 10611810 - 10611710
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||| ||||||| | ||||| ||||||| ||| ||||| ||||| | |||| ||||||||||||||||| |||||||||| | ||||||||||||    
T  10611810 tgatgacatatcatcttgcgttattcttagcatgtttctcagtgattttaaataggttttagcagcaaaaaggatgagtattagaacgattgcctatgat 10611711  T
Q  346 t 346  Q
    |    
T  10611710 t 10611710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 346
Target Start/End: Complemental strand, 145038 - 144973
Alignment:
Q  281 ttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||| ||||| |||||| |||| |||||||| ||| ||||||||||||||||||||||||||    
T  145038 ttttcagtcatttttagtaggttttaccagcaaaacggatgagtattagagcaattgcctatgatt 144973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 39270273 - 39270365
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcc 339  Q
    |||| |||||||||||||| |||| || ||||| ||||||||| ||||| |||| | |||||||| ||||||||||||||||||| | ||||||    
T  39270273 tgatgacatgtcatcttacgttatctt-agcatgtttttcagtcatttttagtaagttttagcagtaaaaaggaggagtattagaacgattgcc 39270365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 2566003 - 2565903
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| ||||||||||  |||| ||||||| ||||||||| |||||||||||| ||| |||  ||||||||||||||||| | | |||| |||||||    
T  2566003 tgatgacaagtcatcttacgatattcttagcatgtttttcagtcattttcagtaggttttggcaagaaaaaggaggagtattataacgattgtctatgat 2565904  T
Q  346 t 346  Q
    |    
T  2565903 t 2565903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 2927971 - 2927887
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||||||  ||| |||||| ||||| |||||||| |||||||||||||    
T  2927971 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttagtagcaaaaatgaggagtattaga 2927887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 10332501 - 10332409
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgc 338  Q
    |||| |||||||||||||| ||||| ||||||| ||||||||| |||||||||| | ||||  || | ||| ||||||||||||| |||||||    
T  10332501 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttacaagtagaaaagaggagtattagatcaattgc 10332409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 14195825 - 14195745
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||| ||||||||| ||||| |||||| |||| ||||||||  |||||||||||||||| |||| |||||||    
T  14195825 ttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcagttgcttatgatt 14195745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 19154915 - 19154815
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| |||||||| | ||||||||||| || | ||||||||  ||||| ||||| || |||||||||||||    
T  19154915 tgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctatgat 19154816  T
Q  346 t 346  Q
    |    
T  19154815 t 19154815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 20754314 - 20754214
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| |||||||| | ||||||||||| || | ||||||||  ||||| ||||| || |||||||||||||    
T  20754314 tgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctatgat 20754215  T
Q  346 t 346  Q
    |    
T  20754214 t 20754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 23127903 - 23127994
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagt-tattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||||||||||||| ||||||| |||||| |||||| |||| |||||||   ||||||||||||| ||||||| |||||||    
T  23127903 gtcatcttacgttatttttagcatatatttcagtctatttt-agtaggttttaccagcaaagcagaggagtattagatcaattgcttatgatt 23127994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 10418620 - 10418554
Alignment:
Q  280 tttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||| |||||||||||| ||||  |||||||  |||||||||||||||||||||||||||||    
T  10418620 ttttttagtcattttcagtaggttttactagcaaaacagaggagtattagagcaattgcctatgatt 10418554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 6018448 - 6018355
Alignment:
Q  253 atgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||  ||||||||||||| |||||||||   ||| |||||| |||| || |||||  |||||||||||||  ||||||||||||||    
T  6018448 atgtcatcttatgttatttttagcatgtttttcagtcgattttagtaggttttaccaacaaaacagaggagtattagattaattgcctatgatt 6018355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 337
Target Start/End: Original strand, 6039303 - 6039388
Alignment:
Q  252 catgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattg 337  Q
    ||||||||||||||||||| ||| ||| ||||||||| |||||||||||  |||| ||||| ||  ||| | ||||||||||||||    
T  6039303 catgtcatcttacattattcttaacatgtttttcagtcattttcagtagattttaccagcataacagagtaatattagagcaattg 6039388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 11578674 - 11578739
Alignment:
Q  281 ttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||| |||||||||| || || | | ||||||||||||||||||| |||||||||    
T  11578674 ttttcagttattttctgtagggtttaacatcacagaagaggagtattagagcaattacctatgatt 11578739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 3173797 - 3173707
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| | ||||| ||||||| ||||||||| ||||||| |||| || ||||| |||  ||||||||||||||   |||||||||||||    
T  3173797 tcatcttgcgttattcttagcatgtttttcagtcattttcattaggtttcagcagtaaatgggaggagtattagaaagattgcctatgatt 3173707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 9978372 - 9978282
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||  ||||| |||| |||||||||||||  ||| ||||||   ||||||||||| |||||||||||||| |  ||||||||||||    
T  9978372 tcatcttatgttattcttagaatatttttcagtttattttagtaggaaatagcagcaaaatggaggagtattagaacggttgcctatgatt 9978282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 21234183 - 21234097
Alignment:
Q  263 acattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgattctg 349  Q
    |||||||||||||||| || |||||| ||||| | |||| |||| ||||| ||  |||||||||||||| | ||| |||||||||||    
T  21234183 acattatttttagcatgttattcagtcatttttaataggttttaccagcataacagaggagtattagagaatttgtctatgattctg 21234097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 10414278 - 10414331
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagt 298  Q
    ||||| ||| |||||||||||||||| ||||||| |||||| ||||||||||||    
T  10414278 ttgatgacaggtcatcttacattattcttagcatgtttttcggttattttcagt 10414331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 7399424 - 7399329
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||| |||||||||||||| ||||| ||| ||| |||| ||||  |||| |||||||||||  |||||||  || |||||||||| |||||||||||    
T  7399424 tgatgacatgtcatcttacgttattcttaacatgtttt-cagtcgtttttagtagggtttactagcaaaacagaagagtattagatcaattgcctat 7399329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 13287710 - 13287810
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||| ||| ||||||||||  ||| ||||||   || || ||||||||| |||||||||| | ||||||||||||    
T  13287710 tgatgacaagtcatcttacgttattcttaacatgtttttcagtttattttagtaggaaataacatcaaaaaggatgagtattagaacgattgcctatgat 13287809  T
Q  346 t 346  Q
    |    
T  13287810 t 13287810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 19201332 - 19201392
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaa 316  Q
    ||||||||| ||||| ||||||| ||||||||| ||||| | |||| ||||||||||||||    
T  19201332 tcatcttacgttattcttagcatgtttttcagtaatttttattaggctttagcagcaaaaa 19201392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 21502947 - 21502851
Alignment:
Q  251 acatgtcatcttacattatttttagcatattttt-cagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||||||||  | |||| ||||| | || ||||| |||||| ||||  ||| |||  ||||||||||||| |||||||||||||||    
T  21502947 acatgtcatcttacattattcgtggcatgttttttcggtcatttttagtaggttttacgagctaaacagaggagtattagaacaattgcctatgatt 21502851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 3736424 - 3736333
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| ||||| |||   |||||||||| |||| |||||||    |||| ||||||| |||||||||||||||    
T  3736424 gtcatcttacgttattcttagcatgttttttagtctatttcagtaggttttaccagcaaagcataggattattagatcaattgcctatgatt 3736333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 6046615 - 6046524
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||  ||||| ||| ||| ||||| ||| |||||||||| | | ||||||| ||||||||||||||| ||   |||||||||||||    
T  6046615 gtcatcttatgttattcttaacatgttttttagtcattttcagtaagttgtagcagctaaaaggaggagtatttgaattattgcctatgatt 6046524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 16055265 - 16055332
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggagga 322  Q
    |||||||||||||||| ||||||| ||||||||||  ||| ||||||   ||||||||||||| ||||    
T  16055265 gtcatcttacattattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaagaagga 16055332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 3692769 - 3692847
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagca 333  Q
    |||||||||| |||||  |||||||||||||| | |||||| ||||| |||| ||||||||  ||| ||||| ||||||    
T  3692769 gtcatcttacgttattcatagcatatttttcattcattttctgtaggttttaccagcaaaaccgagaagtatcagagca 3692847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 9288997 - 9288907
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||| || |||| ||||||||| | |||||||||| |||| ||| | ||   || ||||||||| |||||| ||||||||    
T  9288997 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggttttaccagtagaaccaagaagtattagaacaattgtctatgatt 9288907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 9298789 - 9298699
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||| || |||| ||||||||| | |||||||||| |||| ||| | ||   || ||||||||| |||||| ||||||||    
T  9298789 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggttttaccagtagaaccaagaagtattagaacaattgtctatgatt 9298699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 21707346 - 21707436
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagta-ttagagcaattgcctatga 344  Q
    |||||||||| ||||| ||||||||||||||| | ||||| |||||| |||| ||| | ||  || ||||| ||||| |||||||||||||    
T  21707346 gtcatcttacgttattcttagcatatttttcaatcatttttagtaggttttaccagtataacagaagagtatttagaacaattgcctatga 21707436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 1586281 - 1586188
Alignment:
Q  253 atgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||| ||| ||||| ||||||| |||| ||||  ||  ||||||| | || ||||||||  |||||| ||||||||||||| ||||||||    
T  1586281 atgtcatcctacgttattcttagcatgttttccagtctttaccagtaggttataccagcaaaatagaggagcattagagcaattgtctatgatt 1586188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 1848802 - 1848753
Alignment:
Q  98 acactattcttgatatcaaacaccaatgggtttgctggttggaacccaag 147  Q
    |||||||||||||| ||||||| ||  ||||||||||||||||| |||||    
T  1848802 acactattcttgatgtcaaacatcatcgggtttgctggttggaaaccaag 1848753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 19003763 - 19003865
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||||| |||||| ||||||| ||||| || |||| |||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| |||||    
T  19003763 gttgatgacatgtgatcttacgttattcttggcatgtttttcagttattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgtctatg 19003862  T
Q  344 att 346  Q
    |||    
T  19003863 att 19003865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 20860436 - 20860336
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||| | ||||||| ||||||| | |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  20860436 tgatgacaggtcatcttacgttactgttagcatgtttttcattaattttcagtaggttttagcagcaaaaaggagaagtattagaacaattgcctatgat 20860337  T
Q  346 t 346  Q
    |    
T  20860336 t 20860336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 23214825 - 23214925
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||||||||||||| ||  |||||||| |||||||||||||||| |||| |||||||||||||    
T  23214825 tgatgacaggtcatcttacgttattcttagcatgtttttcagttattttcaatacagtttagcaacaaaaaggaggagtatgagagaaattgcctatgat 23214924  T
Q  346 t 346  Q
    |    
T  23214925 t 23214925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 25920918 - 25920828
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| ||||| |||||||||||||  || |||||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||    
T  25920918 tcatcttacgttattcttagcatatttttttgtcattttcagtaggatttaccagcaaaacggatgagtattagagcaattgcctatgatt 25920828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 34132177 - 34132083
Alignment:
Q  252 catgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||| |||| |||||||||||||||||| ||||||||| | | |||||||||||    
T  34132177 catgtcatcttactttattcttagcatgtttttcagctattttcattaggttttagcagcaaaaaggagaagtattagaacgactgcctatgatt 34132083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 23387574 - 23387647
Alignment:
Q  273 tagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  23387574 tagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 23387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 19053198 - 19053102
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||| ||||||||| |||| ||||| ||||||| ||| |||||||||||||||||  |||  ||||||||||||||||||||||| |||||||||||    
T  19053198 tgatgacatgtcattttacgttattcttagcatgtttatcagttattttcagtagatttttacagcaaaaaggaggagtattagaacaattgcctat 19053102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 18832310 - 18832219
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||||||||||||| |||||||||  |||||| |||| |||| || |||||  |||||||||||||||||||| ||||||||    
T  18832310 gtcatcttacattatttttagcatgtttttcagtctttttcaataggttttaccaacaaaacagaggagtattagagcaattgtctatgatt 18832219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 17469569 - 17469658
Alignment:
Q  257 catcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||| ||||| ||||||| ||||||| | |||||||| ||| |||| ||||||||  |||||||||||||||||||||||||||||    
T  17469569 catcttacgttattcttagcatgtttttcaatcattttcagcaggttttaccagcaaaacagaggagtattagagcaattgcctatgatt 17469658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 29988055 - 29987953
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagca-aaaaggaggagtattagagcaattgcctatg 343  Q
    ||||| ||| |||||||||| ||||||||||||| ||||||||| ||||| |||||  |||||||||| |||||| ||||||||||| | ||||| ||||    
T  29988055 ttgatgacaggtcatcttacgttatttttagcatgtttttcagtcatttttagtagattttagcagcaaaaaaggtggagtattagaacgattgcatatg 29987956  T
Q  344 att 346  Q
    |||    
T  29987955 att 29987953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 22797429 - 22797520
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| || |||| ||||||||| ||||||  |||| ||||  |||||||||||| ||||||||||| |||||||||||||    
T  22797429 gtcatcttacgttattattcgcatgtttttcagtcattttcgataggttttattagcaaaaaggagaagtattagagcgattgcctatgatt 22797520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 26122480 - 26122379
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| || |||||| |||||| ||||||| ||||| |||  |||| |||||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  26122480 ttgatgacaggttatcttaaattattcttagcatgttttttagtcgtttttagtaggttttaccagcaaaacagaggagtattagagcaattgtctatga 26122381  T
Q  345 tt 346  Q
    ||    
T  26122380 tt 26122379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 24162020 - 24162111
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| |||| ||||| ||||||| ||||||||| ||||||| |||  |||| |||||||| |||| |||||||||  ||||||||||||||    
T  24162020 gtcattttacgttattcttagcatgtttttcagtcattttcaatagattttaccagcaaaatggagaagtattagaataattgcctatgatt 24162111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 25400747 - 25400822
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| |||| ||||| ||||||| ||||||||| ||||||| |||| |||||||| ||||||||||| |||||||    
T  25400747 gtcattttacgttattcttagcatgtttttcagtcattttcattaggttttagcaggaaaaaggaggaatattaga 25400822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 19006858 - 19006948
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||| |||| || ||||||||||  ||| ||||||   ||||| ||||| |||||||||||||| | |||||||||||||    
T  19006858 tcatcttacattattcttagtatgtttttcagtttattttagtaggaaatagcaacaaaatggaggagtattagaacgattgcctatgatt 19006948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 28666579 - 28666489
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||  ||||| ||| ||| ||||||| | |||||||||||| |||||||||||||||||| |||||||||   | |||||||||||    
T  28666579 tcatcttatgttattcttatcatgtttttcattcattttcagtaggttttagcagcaaaaaggagaagtattagaatgactgcctatgatt 28666489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 15691360 - 15691304
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttag 307  Q
    |||||||||||||| ||||| ||||||||||||| ||| |||||||||||| |||||    
T  15691360 acatgtcatcttacgttattcttagcatattttttagtcattttcagtaggttttag 15691304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 24142504 - 24142420
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||| |||||||||||||  ||||| ||||||| ||||||||||  ||| |||||  ||||||| |||||| |||||||||||||    
T  24142504 tgatgacatgtcatcttatgttattcttagcatgtttttcagtttattttagtagaatttagcatcaaaaaagaggagtattaga 24142420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 32415830 - 32415878
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  32415830 tgatgacatgtcatcttacattattcttagcatatttttcagtaatttt 32415878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 24658308 - 24658383
Alignment:
Q  255 gtcatcttacattatttttagcata-tttttcagttattttcagtagggtttagcagcaaaaaggaggagtattag 329  Q
    |||||||||| ||||||||| | |  ||||||| | ||||| |||||| |||||||||||||||||||||||||||    
T  24658308 gtcatcttacgttatttttaactttgtttttcaatcatttttagtaggttttagcagcaaaaaggaggagtattag 24658383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 20102892 - 20102941
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||| |||||    
T  20102892 ttgatgacatgccatcttacgttatttttagcatatttttcagtcatttt 20102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 20548452 - 20548553
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||| |||||  |||||| ||||||||||  ||| ||||||   ||||| ||||| |||||||||||||| | ||||||| |||    
T  20548452 ttgatgacaggtcatcttacgttattcctagcatgtttttcagtttattttagtaggaaatagcaacaaaatggaggagtattagaacgattgcctgtga 20548551  T
Q  345 tt 346  Q
    ||    
T  20548552 tt 20548553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 26069347 - 26069246
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| || ||||||| ||||| ||| ||| ||||| ||| |||||||||||  |||| ||||| ||  ||||||||||||| ||||||| |||||    
T  26069347 ttgatgacaagttatcttacgttattcttaacatgttttttagtcattttcagtagattttaccagcagaacagaggagtattagaacaattgcttatga 26069248  T
Q  345 tt 346  Q
    ||    
T  26069247 tt 26069246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 23266913 - 23266853
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggttta 306  Q
    |||| ||| ||||||||||||||||||| |||| ||||| ||| |||||||||||| ||||    
T  23266913 tgatgacaggtcatcttacattatttttggcatgttttttagtcattttcagtaggtttta 23266853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 19761577 - 19761636
Alignment:
Q  242 tagttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagg 301  Q
    |||||||| ||| |||||||||| ||||| ||||||| || |||||| ||||||||||||    
T  19761577 tagttgatgacaggtcatcttacgttattattagcatgttattcagtcattttcagtagg 19761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 20593261 - 20593222
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttatttt 294  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  20593261 gtcatcttacattattttcagcatatttttcacttatttt 20593222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 23110204 - 23110283
Alignment:
Q  254 tgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagca 333  Q
    ||||||||||| ||||| ||| ||| ||||| ||| ||| || ||||| |||| ||||||||  ||||||||||||||||    
T  23110204 tgtcatcttacgttattcttaacatgttttttagtcattatcggtaggttttaacagcaaaacagaggagtattagagca 23110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 24320566 - 24320605
Alignment:
Q  290 attttcagtagggtttagcagcaaaaaggaggagtattag 329  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  24320566 attttcagtaggttttagcagcaaaaaggcggagtattag 24320605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 24513231 - 24513286
Alignment:
Q  291 ttttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||  || ||||||||||| |||||||||||||| | ||||||||||||    
T  24513231 ttttcagtagatttcagcagcaaaaaagaggagtattagagaatttgcctatgatt 24513286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 28280381 - 28280342
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatattttt 284  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  28280381 ttgatgacatgtcatcttacgttatttttagcatattttt 28280342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 26117528 - 26117434
Alignment:
Q  252 catgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||||||||||| ||||||| ||||| | | |||||||| ||| ||||  |||| ||  || |||| ||||| ||||||| |||||||    
T  26117528 catgtcatcttacattattcttagcatgttttttaatcattttcagcaggttttacaagcagaagagatgagttttagaacaattgcttatgatt 26117434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 16521962 - 16522003
Alignment:
Q  305 tagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||| |||||||||||||| | |||||||||||||    
T  16521962 tagcagcaaaatggaggagtattagaacgattgcctatgatt 16522003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 29799131 - 29799038
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgattctg 349  Q
    |||||||| |||||| |||| || ||||| ||| ||||| | |||| | || ||||||||  ||||||||| ||| |||||| |||||||||||    
T  29799131 tcatcttatattattcttagtatgttttttagtcatttttaataggttctaccagcaaaatagaggagtataagaacaattgtctatgattctg 29799038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 20680668 - 20680628
Alignment:
Q  254 tgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    |||||||||| |||||||||||||| ||||| |||||||||    
T  20680668 tgtcatcttatattatttttagcatgttttttagttatttt 20680628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 31600075 - 31600175
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| ||| |||||| ||||| ||||||| ||||| |||  ||||| ||||| |||| || |||||  || ||||||||||| ||||| |||||||    
T  31600075 tgatgacaggtcctcttacgttattcttagcatgtttttaagtctttttccgtaggttttaccaacaaaacagaagagtattagagtaattgtctatgat 31600174  T
Q  346 t 346  Q
    |    
T  31600175 t 31600175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 92823 - 92924
Alignment:
Q  241 gtagttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcct 340  Q
    ||||||||| ||| || ||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||    
T  92823 gtagttgatgacaagttatcttacgttattcttagcatgtttttcagttatttttagtagggtttagcagcaaaaaagaggaatattagagccattgcct 92922  T
Q  341 at 342  Q
    ||    
T  92923 at 92924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 18457111 - 18457211
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| ||||||||||  |||| |||| || || ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  18457111 tgatgacaggtcatcttacgctattcttaggatgttattcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatgat 18457210  T
Q  346 t 346  Q
    |    
T  18457211 t 18457211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 34276437 - 34276537
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| ||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | | ||||||||||||    
T  34276437 tgatgacaggtcattttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattataacgattgcctatgat 34276536  T
Q  346 t 346  Q
    |    
T  34276537 t 34276537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 19912678 - 19912593
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| ||| |||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||    
T  19912678 ttgatgacaggtcatcttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaagaggagtattaga 19912593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 8115305 - 8115393
Alignment:
Q  257 catcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||||||| ||||||||||||| |||| |||||||||| |||||| ||||| |||||||||||||||||||||| | ||||||||||||    
T  8115305 catcttacgttatttttagcatgttttccagttattttgagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatgat 8115393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 12517387 - 12517287
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||   ||||||||||||    
T  12517387 tgatgacaggtcatcttacgttattcttagcatctttttcagtcattttcagtaggttttagtagcaaaaaggaggagtattagaatgattgcctatgat 12517288  T
Q  346 t 346  Q
    |    
T  12517287 t 12517287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 8145336 - 8145245
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||||| ||||||| ||||||| | | |||||||||| |||||||||||||| ||||||||||| | |||||||||||||||    
T  8145336 gtcatcttacattattcttagcatgtttttcaatcaatttcagtaggttttagcagcaaaaatgaggagtattaaaacaattgcctatgatt 8145245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 22247088 - 22246994
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||| ||||| ||||||| ||||||||| |||||||||||| |||| ||||||||  |||||||||||||||||||| ||||||||    
T  22247088 acatgtcatcttacgttattcttagcat-tttttcagtcattttcagtaggttttaccagcaaaatagaggagtattagagcaattgactatgatt 22246994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 22470401 - 22470502
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| |||||||||||||| ||||| ||||||| ||||||||| |||||||||| | |||| ||||||||  ||||||| ||||||||||||| |||||    
T  22470401 ttgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttaccagcaaaacagaggagtgttagagcaattgcatatga 22470500  T
Q  345 tt 346  Q
    ||    
T  22470501 tt 22470502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 25850957 - 25851048
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||  ||||| ||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||| | | |||||||||||||    
T  25850957 gtcatcttatgttattcttagcatgtttttcagttatttttagtaggatttagcagcagaaaggaggagtattaaaacgattgcctatgatt 25851048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 346
Target Start/End: Complemental strand, 14977892 - 14977803
Alignment:
Q  257 catcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||| ||||| ||||||||||||||||||  ||| |||| | ||||| |||||||||||||||||||| | |||||||||||||||    
T  14977892 catcttacgttattcttagcatatttttcagtttattttagtatgatttagtagcaaaaaggaggagtattataacaattgcctatgatt 14977803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 16242193 - 16242293
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||| ||||| ||||||||||||||| | ||||| |||| | |||||||| |||||| |||||||||||| | |||||||||||    
T  16242193 ttgatgacaggtcatcttacgttattcttagcatatttttcactcatttttagta-gttttagcagaaaaaagaaggagtattagaacgattgcctatga 16242291  T
Q  345 tt 346  Q
    ||    
T  16242292 tt 16242293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 27074040 - 27073949
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||||||||||| ||||||||||  ||| | ||||   ||||||||||| |||||||||||||| ||||| |||||||||    
T  27074040 gtcatcttacgttatttttagcatgtttttcagtttattttaataggaaatagcagcaaaatggaggagtattagaacaattccctatgatt 27073949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 8765761 - 8765671
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||| ||||| ||||||| ||||||||| ||||||| |||| |||||| ||||||| ||||||||||||| | ||| |||||||||    
T  8765761 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatgatt 8765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 8770651 - 8770561
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||| ||||| ||||||| ||||||||| ||||||| |||| |||||| ||||||| ||||||||||||| | ||| |||||||||    
T  8770651 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatgatt 8770561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 16228343 - 16228444
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||| ||||| |||||||  |||||||||  ||| ||||||   ||||| |||||||||||||||||||| | |||||||||||    
T  16228343 ttgatgacaggtcatcttacgttattcttagcatgcttttcagtttattttagtaggaaatagcaacaaaaaggaggagtattagaactattgcctatga 16228442  T
Q  345 tt 346  Q
    ||    
T  16228443 tt 16228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 18535868 - 18535767
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||| ||||| ||||||| ||||||||| | ||| |||||| |||| |||||||   ||||||||||||| ||||||| |||||    
T  18535868 ttgatgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagcagaggagtattagatcaattgcttatga 18535769  T
Q  345 tt 346  Q
    ||    
T  18535768 tt 18535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 3114729 - 3114809
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||| |||||||||  ||| ||||||| |||| ||||||||  |||||||||||||| ||||||||||||||    
T  3114729 ttattcttagcatgtttttcagtcttttacagtaggttttaccagcaaaacagaggagtattagagtaattgcctatgatt 3114809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 26093002 - 26092950
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagt 298  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  26093002 tgatgacatgtcatcttacattattcttagcatatttttcaattattttcagt 26092950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 12771211 - 12771286
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||||||||| ||||| ||||||| ||||||||| ||||||||||   |||||||||||||| || ||||||||||    
T  12771211 gtcatcttacgttattcttagcatgtttttcagtcattttcagtatattttagcagcaaaaatgatgagtattaga 12771286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 20891654 - 20891744
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||||||||| ||||| |||||||||||||||||  ||||||||||| |||| || |||||   |||| ||||| | ||||||||||||||    
T  20891654 gtcatcttacgttattcttagcatatttttcagtcgttttcagtaggttttaccaacaaaacataggaatattatatcaattgcctatgat 20891744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 20431518 - 20431469
Alignment:
Q  297 gtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  20431518 gtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 20431469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 27412658 - 27412759
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagt-tattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| ||| |||||||||| ||||||||||||| ||||||||| | ||||  |||||   |||||| |||| |||||||||||| | |||||||||||||    
T  27412658 tgatgacaagtcatcttacgttatttttagcatgtttttcagtattttttttgtaggaaatagcagaaaaatggaggagtattaaaacaattgcctatga 27412757  T
Q  345 tt 346  Q
    ||    
T  27412758 tt 27412759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 1096761 - 1096860
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| || |||| ||||| ||| |||||||||  | |||||||||||||||||||| || |||| | ||||||||||||    
T  1096761 tgatgacaggtcatcttacgttattctttgcatgttttt-agtcattttcagtcagttttagcagcaaaaaggaggattactagaacgattgcctatgat 1096859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 12372344 - 12372416
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||||| | ||| ||||||| ||||||| | |||||||||||| ||||  ||||||||||||||||||||||    
T  12372344 atcttacgtaattcttagcatttttttcaatcattttcagtaggttttacgagcaaaaaggaggagtattaga 12372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 19909029 - 19909129
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| |||||| ||| || ||||||||||  | | ||||||   ||||||||||||| |||||||||||| | ||| ||||||||    
T  19909029 tgatgacatgtcatcttacgttatttgtagaatgtttttcagtttatattagtaggaaatagcagcaaaaagaaggagtattagaacgattccctatgat 19909128  T
Q  346 t 346  Q
    |    
T  19909129 t 19909129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 819855 - 819946
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| ||||||||| | |||||||||| ||||  |||| ||  ||||||||||||| || |||| |||||||    
T  819855 gtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggttttacaagcataatagaggagtattagatcatttgcttatgatt 819946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 19170146 - 19170241
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||| || |||| ||||||| |||||| || | ||||||| || |||||||| ||||| ||||||||||| | ||||| |||| ||||    
T  19170146 acatgtcatcttgcactattcttagcatgtttttcggtcaatttcagttggttttagcagaaaaaacgaggagtattaaaacaatttcctacgatt 19170241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 52935542 - 52935625
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgc 338  Q
    |||||||||| ||||| ||||||| ||||||| | |||||||||||| |||| ||||||||  || || |||||||| ||||||    
T  52935542 gtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccagcaaaacagatgaatattagagtaattgc 52935625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 13938892 - 13938946
Alignment:
Q  292 tttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||||| |||||||||||||||||||| | |||||| ||||||    
T  13938892 tttcagtaggttttagcaccaaaaaggaggagtattagaacgattgccaatgatt 13938946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 2508725 - 2508797
Alignment:
Q  252 catgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagt 324  Q
    ||||||||||||| ||||| |||| || ||||||||| |||||||||| | |||| |||| ||||||| ||||    
T  2508725 catgtcatcttacgttattcttagtatgtttttcagtcattttcagtaagttttaacagcgaaaaggatgagt 2508797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 3429229 - 3429324
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagt-tattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||| ||||| ||| ||| ||||||| | |||||| |||||| |||| |||||||   |||||||||||||| |||||| |||||||    
T  3429229 acatgtcatcttacgttattcttatcatgtttttcattctatttt-agtaggttttaccagcaaaccagaggagtattagaggaattgcatatgatt 3429324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 7805839 - 7805739
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||| | |||||||||| | ||||    |||||  ||||||||||||||||||| | ||||||    
T  7805839 tgatgacaggtcatcttacgttattcttagcatgtttttcaatcattttcagtatgttttacatccaaaatagaggagtattagagcaattacttatgat 7805740  T
Q  346 t 346  Q
    |    
T  7805739 t 7805739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 20021817 - 20021901
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||| |||||||||||||| ||| | ||||||| ||||||||||  ||| |||| |   ||||||||||| ||||||||||||||    
T  20021817 tgatgacatgtcatcttacgttactcttagcatgtttttcagtttattttagtatgaaatagcagcaaaatggaggagtattaga 20021901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Original strand, 2166078 - 2166116
Alignment:
Q  290 attttcagtagggtttagcagcaaaaaggaggagtatta 328  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  2166078 attttcagtaggttttagcaacaaaaaggaggagtatta 2166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 19387879 - 19387937
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagt 324  Q
    ||||||||||| | ||||||||| |||||||||||| |||| ||||||||  |||||||    
T  19387879 ttatttttagcttgtttttcagtcattttcagtaggttttaccagcaaaatagaggagt 19387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 8881460 - 8881501
Alignment:
Q  305 tagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| |||||||||||||||||||| | |||||||||||||    
T  8881460 tagcaacaaaaaggaggagtattagaacgattgcctatgatt 8881501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 19573575 - 19573675
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||  ||||||||||||| ||||| ||||| ||| ||||||   |  ||||||||| || | |||||||| |||||||||||||    
T  19573575 ttgatgacaggtcatcttatgttatttttagcatgttttttagttaattttagtaggaaattacagcaaaaa-gatgcgtattagaacaattgcctatga 19573673  T
Q  345 tt 346  Q
    ||    
T  19573674 tt 19573675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 51118485 - 51118518
Alignment:
Q  251 acatgtcatcttacattatttttagcatattttt 284  Q
    |||||||||||||| |||||||||||||||||||    
T  51118485 acatgtcatcttacgttatttttagcatattttt 51118518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 27852603 - 27852663
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggttta 306  Q
    |||| ||||||| |||||| ||||||||||||| | ||| ||| |||||||||||| ||||    
T  27852603 tgatgacatgtcgtcttacgttatttttagcatgtcttttagtcattttcagtaggtttta 27852663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 17351075 - 17350975
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||| |||||||    
T  17351075 tgatgacaagtcatcttacgttattcttaacatatttttcagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattgtctatgat 17350976  T
Q  346 t 346  Q
    |    
T  17350975 t 17350975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 18758386 - 18758298
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| ||||||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||    
T  18758386 atcttacgttatttttagcatgttttttaattattttcagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatgatt 18758298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 28918275 - 28918186
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||| ||||| ||||||| ||||||||| |||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||    
T  28918275 tcattttacgttattcttagcatgtttttcagtcattttcagtaggttttagctacaaaaaggaggagtattagaacaattgcctatgat 28918186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 17891828 - 17891728
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| ||||| ||| ||| ||||||||| |||||||||||| |||| ||||||||  |||||||||||||| |||| ||||||||    
T  17891828 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttaccagcaaaacagaggagtattagagtaatttcctatgat 17891729  T
Q  346 t 346  Q
    |    
T  17891728 t 17891728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 24086315 - 24086406
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||| ||||| ||||| ||||||| ||||||||||  ||| |||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  24086315 gtcaacttacgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaggaggagtattagaacgattgcctatgatt 24086406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 35680111 - 35680200
Alignment:
Q  257 catcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||| ||||| ||||||| ||||| ||| |||||||||||| |||| ||||||||  |||||||||||||||||||| ||||||||    
T  35680111 catcttacgttattcttagcatgtttttaagtcattttcagtaggttttaccagcaaaacagaggagtattagagcaattgtctatgatt 35680200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 18120550 - 18120645
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||| ||||| ||||||| ||||||||||  ||| ||||||   ||||||||||| |||||||||||||| | |||||||||||||    
T  18120550 acatgtcatcttacgttattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaatggaggagtattagaacgattgcctatgatt 18120645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 27907531 - 27907622
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||| ||||||||||| ||||||| ||||||||| |||||||||| | ||||||| |||||||||| ||||||| | | |||||||||||||    
T  27907531 gtcaccttacattattcttagcatgtttttcagtcattttcagtaagttttagcaacaaaaaggagaagtattaaaactattgcctatgatt 27907622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 25537653 - 25537553
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||||||  ||| ||||||   || ||| ||||||||||||||||||||| ||||||||||||    
T  25537653 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggaaataacagtaaaaaggaggagtattagagcgattgcctatgat 25537554  T
Q  346 t 346  Q
    |    
T  25537553 t 25537553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 340
Target Start/End: Original strand, 23010042 - 23010137
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcct 340  Q
    ||||| ||| |||||||||| ||||| ||||||| ||||||||| ||||||| |||| |||| |||||||| | |||||||||||| ||| |||||    
T  23010042 ttgataacaagtcatcttacgttattcttagcatgtttttcagtcattttcaataggttttaccagcaaaacgaaggagtattagatcaactgcct 23010137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 25532324 - 25532233
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| |||| ||||| ||||||| ||||||||||  ||| ||||||   |||||||||||||||||||||||||| | |||||||||||||    
T  25532324 gtcattttacgttattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatgatt 25532233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 21905824 - 21905739
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| ||| |||||||||  ||||| ||||||| ||||||||| |||||| ||| | |||||||| |||||||||||||||||||    
T  21905824 ttgatgacaggtcatcttatgttattcttagcatgtttttcagtcattttctgtatgttttagcaggaaaaaggaggagtattaga 21905739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 28930360 - 28930271
Alignment:
Q  258 atcttacattatttttagcatattttt-cagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| |||| |||||||| ||||| |||| |||||||||| | |||||| ||||||| ||||| ||||||| |||||||||||||||    
T  28930360 atcttacgttatgtttagcatgttttttcagtcattttcagtatgttttagctgcaaaaatgaggaatattagaacaattgcctatgatt 28930271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 25196708 - 25196608
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||  ||||| ||| ||| ||||||||||  ||| |||||| |||||||||||||| ||| ||||||| | | ||||||||||||    
T  25196708 tgatgacatgtcatcttatgttattcttaacatgtttttcagtttattttagtaggatttagcagcaaaaaagagaagtattaaaacgattgcctatgat 25196609  T
Q  346 t 346  Q
    |    
T  25196608 t 25196608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 26313275 - 26313191
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||| ||| |||||||||||||||| ||||||| ||||| | | | |||||||||| ||||||||||||||| | ||||||||||    
T  26313275 tgatgacaagtcatcttacattattcttagcatgttttttaatcaatttcagtaggttttagcagcaaaaagaatgagtattaga 26313191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 23861184 - 23861134
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  23861184 gttgatcacatgtcatcttacgttatttttagcatatatttcagtcatttt 23861134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 22627458 - 22627381
Alignment:
Q  269 tttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||| |||||||||||| |||| ||||||||   ||||||||||||| ||||| ||||||||    
T  22627458 tttttagcatgttttttagtcattttcagtaggttttaccagcaaaatataggagtattagagaaattgtctatgatt 22627381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 26651636 - 26651737
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||||||||||||| ||| ||||| ||| |||||||||||| || |  || | ||  || |||||||||||||||||| |||||    
T  26651636 ttgattacaagtcatcttacattatttttaacatgtttttgagtcattttcagtaggtttcacaagtagaatagatgagtattagagcaattgcttatga 26651735  T
Q  345 tt 346  Q
    ||    
T  26651736 tt 26651737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 34574611 - 34574510
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttc-agttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| ||| |||||||||| ||||| ||||||| |||||  |||||||||||||||| ||||  || ||| ||||||||||||||| | | |||||||||    
T  34574611 tgattacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttaatagaaaataggaggagtattagaacgaatgcctatga 34574512  T
Q  345 tt 346  Q
    ||    
T  34574511 tt 34574510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 16157083 - 16157139
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagg 301  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  16157083 ttgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtagg 16157139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 27540274 - 27540349
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| |||| ||| | ||||||||||||||||| |||||||||||| |||||||  ||||| ||||| |||||||    
T  27540274 gtcatattacgttactcttagcatatttttcagtcattttcagtaggttttagcataaaaaatgaggaatattaga 27540349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 29892282 - 29892232
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagg 301  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||| ||||    
T  29892282 acatgtcatcttacgttattcttaacatatttttcagttattttcaatagg 29892232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 20853179 - 20853094
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| ||||||||||| || ||||| ||||||| ||||| ||||  ||| |||| |  ||||| |||||||||||||||||||||    
T  20853179 ttgatgacatgtcatctcacgttattattagcatgtttttaagtttattttagtaagaattagctgcaaaaaggaggagtattaga 20853094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 29144733 - 29144647
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagca-gcaaaaaggaggagtattaga 330  Q
    ||||| ||| |||||||||| ||||| ||||||| ||||| ||| |||  || |||| ||||||| ||||||||||||| |||||||    
T  29144733 ttgatgacaggtcatcttacgttattcttagcatgttttttagtcattaccaataggttttagcaagcaaaaaggaggaatattaga 29144647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 28925059 - 28925108
Alignment:
Q  98 acactattcttgatatcaaacaccaatgggtttgctggttggaacccaag 147  Q
    ||||| |||||||| ||||||||||  ||||||||||||||||| |||||    
T  28925059 acactgttcttgatgtcaaacaccaccgggtttgctggttggaaaccaag 28925108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 20379363 - 20379283
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| |||| || ||||||||||  ||| ||||||   ||| |||||||||||||||||||||| | |||| ||||||||    
T  20379363 ttattcttaggatgtttttcagtttattttagtaggaaataggagcaaaaaggaggagtattagaacgattgtctatgatt 20379283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 15542308 - 15542408
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| ||||| ||| ||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||    
T  15542308 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttagcagcaaaaagtaggagtattagaacgattgcctatgat 15542407  T
Q  346 t 346  Q
    |    
T  15542408 t 15542408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 28009838 - 28009747
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||  || | ||||||||||||||||||||| ||||||||||||||||||    
T  28009838 acatgtcatcttacattattcttagcatgtttttcagtcattttcgctaagttttagcagcaaaaaggaggagcattagagcaattgcctat 28009747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 16180799 - 16180715
Alignment:
Q  261 ttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| | |||||||||||||    
T  16180799 ttacattattcttagcatgtttttcagttattttcagtagagtttagcaacaaaaaggaggagtattagaac-attgcctatgatt 16180715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 729224 - 729133
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| |||||||  |||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||    
T  729224 gtcatcttacgttattcttagcatgcttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgtctatgatt 729133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 12210353 - 12210278
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||||||||||||||| ||||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||    
T  12210353 gtcatcttacattattcttagcatgtttttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattaga 12210278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 21663089 - 21663190
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||| ||||| ||||||| ||||||||| |||||||||||| |||| || |||||||||| ||||||||| | |||||||||||    
T  21663089 ttgatgacaggtcatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacatcaaaaaggagaagtattagaacgattgcctatga 21663188  T
Q  345 tt 346  Q
    ||    
T  21663189 tt 21663190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 22624714 - 22624613
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| |||||||||||||||||||| ||||||| ||||| ||||  ||| |||||| |||||||||||||||||||||||||| |   |||||||||||    
T  22624714 ttgatgacatgtcatcttacattattcttagcatgtttttaagtttattttagtaggatttagcagcaaaaaggaggagtattaaaatgattgcctatga 22624615  T
Q  345 tt 346  Q
    ||    
T  22624614 tt 22624613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 26647357 - 26647456
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| |||||||||||||||||  ||||||||||| |||| || ||||| |||||||||||||||||| ||||||||||    
T  26647357 tgatgacaggtcatcttacgttattcttagcatatttttcagtctttttcagtaggttttaccaacaaaacggaggagtattagagcaa-tgcctatgat 26647455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 347
Target Start/End: Original strand, 22507381 - 22507483
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttc-agttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| |||||| ||||||| ||||| ||||||| |||||  ||||||||||| |||| |||||| ||||||||||||||||||||| | |||||||||||    
T  22507381 tgatgacatgtgatcttacgttattcttagcatgtttttttagttattttcattaggttttagcggcaaaaaggaggagtattagaacgattgcctatga 22507480  T
Q  345 ttc 347  Q
    |||    
T  22507481 ttc 22507483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 15158803 - 15158872
Alignment:
Q  261 ttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||| ||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  15158803 ttacgttattcttagcatgtttttcagttattttaagtaggatttagcagcaaaaaggaggagtattaga 15158872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 18527496 - 18527596
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||| | ||||||| |||| |||||| |||||||||||||||||||||   ||||||||||||    
T  18527496 tgatgacaagtcatcttacgttattcttagcatctttttcactcattttcaataggttttagcggcaaaaaggaggagtattagaatgattgcctatgat 18527595  T
Q  346 t 346  Q
    |    
T  18527596 t 18527596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 21450864 - 21450764
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||  |||| |||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||| ||   ||||||||||||    
T  21450864 tgatgacaggtcatcttaagttatctttagcatgtttctcagtcattttcagtaggttttagcagcaaaaaggaggagtattggaaagattgcctatgat 21450765  T
Q  346 t 346  Q
    |    
T  21450764 t 21450764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 16363710 - 16363620
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||  |||| || |||||  ||||||||||||| |||||||||||||||    
T  16363710 tcatcttacgttatttttagcatgttttccagtcattttcagtagtttttaccaacaaaatagaggagtattagatcaattgcctatgatt 16363620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 26611329 - 26611431
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||||| ||| |||||||||| ||||| ||||||| ||||||| ||| | | |||||| ||||||||||||||||||||||||| ||   ||||||||||    
T  26611329 gttgatgacaggtcatcttacgttattcttagcatgtttttcaattaatattagtaggatttagcagcaaaaaggaggagtattggaatgattgcctatg 26611428  T
Q  344 att 346  Q
    |||    
T  26611429 att 26611431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 22426514 - 22426615
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| |||||||||| | ||| ||||||| ||||||||||  ||| ||||||   |||||||||||||||||||||||||| | |||||||||||    
T  22426514 ttgatgacaggtcatcttacgtcattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatga 22426613  T
Q  345 tt 346  Q
    ||    
T  22426614 tt 22426615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 24901307 - 24901214
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgc 338  Q
    ||||| ||| |||||||||| ||||||||||||||||||||| | |||||||||||  |||| ||||||||  ||| ||||||||| |||||||    
T  24901307 ttgattacaagtcatcttacgttatttttagcatatttttcaatcattttcagtagattttaccagcaaaacagagaagtattagatcaattgc 24901214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 27973388 - 27973319
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtatt 327  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  27973388 atcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacagcaaaaaggaggagtatt 27973319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 18734597 - 18734685
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| ||||| ||||||| ||||||||||   || |||||| |||| ||||||||||||||||||||||| | |||||||||||||    
T  18734597 atcttacgttattcttagcatgtttttcagtttactttagtaggatttaacagcaaaaaggaggagtattagaacgattgcctatgatt 18734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 346
Target Start/End: Original strand, 12011205 - 12011284
Alignment:
Q  267 tatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||| |||||||   |||||||||||| |||| |||||||| | | ||||||||||||||||||||||||||    
T  12011205 tatttttagcatgtttttcacacattttcagtaggttttaccagcaaaacgaatgagtattagagcaattgcctatgatt 12011284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 14782628 - 14782544
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattag 329  Q
    ||||| ||| |||||||||| ||||| ||||||| ||||||| | | ||||| |||| |||||||||||||||||||| ||||||    
T  14782628 ttgatgacaggtcatcttacgttattcttagcatgtttttcactcaatttcaataggttttagcagcaaaaaggaggactattag 14782544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 16817108 - 16817208
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||| ||| ||||||||||  ||| ||||||   |||||||||||||||||||| ||||| | ||||||||||||    
T  16817108 tgatgacaagtcatcttacgttattcttaacatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtgttagaactattgcctatgat 16817207  T
Q  346 t 346  Q
    |    
T  16817208 t 16817208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 18832312 - 18832212
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||  || || ||||||| ||||||||||| ||| | ||||  ||||||||||||||||||||||||||| | ||| ||||||||    
T  18832312 tgatgacaggtcatcttaggttcttcttagcatgtttttcagttactttaattaggtcttagcagcaaaaaggaggagtattagaacgattacctatgat 18832213  T
Q  346 t 346  Q
    |    
T  18832212 t 18832212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 25402435 - 25402519
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||| ||| |||||||| | ||||| ||||||| ||||||||||  ||| |||||| |||||||||||||| |||||||||||||    
T  25402435 tgatgacaggtcatcttgcgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaagaggagtattaga 25402519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 10062960 - 10063010
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttca 296  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  10062960 tgatcacatgtcatcttacgttatttttagtatatttttaagttattttca 10063010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 15571698 - 15571788
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| ||||||||||||| ||||||||| | ||| |||||| ||||  ||||||   ||||||||||||| |||||| ||||||||    
T  15571698 tcatcttacgttatttttagcatgtttttcagtcaattttagtaggttttactagcaaagcagaggagtattagatcaattgtctatgatt 15571788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 22621891 - 22621791
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| ||| || ||||||| | ||| ||||||| ||||||||| ||||| |||||| |||| ||||||| | |||||| |||||| |||||||||||||    
T  22621891 ttgatgacaggttatcttacgtaattcttagcatgtttttcagtcatttttagtagg-tttaccagcaaagaagaggagaattagatcaattgcctatga 22621793  T
Q  345 tt 346  Q
    ||    
T  22621792 tt 22621791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 26652672 - 26652616
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagg 301  Q
    ||||| |||||||||| ||| ||||||||||||| ||||||||||||||| ||||||    
T  26652672 ttgatgacatgtcatcctacgttatttttagcatgtttttcagttatttttagtagg 26652616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 35133981 - 35133881
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| |||| | |||||| |||||||||  |||| |||||| |||| || ||||| |||||||||||| || ||||||||| |||    
T  35133981 tgatgacaggtcatcttacgttatctgtagcatgtttttcagtcttttttagtaggttttaccaacaaaatggaggagtattaaagtaattgcctacgat 35133882  T
Q  346 t 346  Q
    |    
T  35133881 t 35133881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 9403686 - 9403631
Alignment:
Q  291 ttttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||| ||||||||||||||| |||||||||||| |  ||||||||||||    
T  9403686 ttttcagtaggttttagcagcaaaaagaaggagtattagaacgtttgcctatgatt 9403631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 18827484 - 18827393
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||| ||| ||||||||||||||| | ||||  ||||||| | |||||| ||||||||||   |||||||||||||    
T  18827484 gtcatcttacgttattcttaacatgtttttcagttattttaattaggtcttagcaggagaaaggatgagtattagaatgattgcctatgatt 18827393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 20107942 - 20107867
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||||||||||| ||| ||||||| |||||| |||  ||| ||||||   ||||||||||||||||||||||||||    
T  20107942 gtcatcttacatcattcttagcatgtttttctgtttattttagtaggaaatagcagcaaaaaggaggagtattaga 20107867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 26022447 - 26022392
Alignment:
Q  291 ttttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||| |||| ||||||||||| |||||||| |||||||||| |||||||    
T  26022447 ttttcagtaggttttaccagcaaaaaggtggagtattggagcaattgcttatgatt 26022392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 11845231 - 11845281
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttcagtagggttta 306  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||||| ||||    
T  11845231 tcatcttacgttattcttagcatatttttcagttatttttagtaggtttta 11845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 16785606 - 16785700
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    ||||| ||||||||  |||||||||||| || || | | ||||||| | || |||| ||| |||| |||||||||||||| ||||||||||||||    
T  16785606 acatgacatcttacgctatttttagcatgttcttaaataattttcaatgggttttaccagtaaaacggaggagtattagaacaattgcctatgat 16785700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 16915195 - 16915296
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagt-tattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||| ||| |||||||||| ||||| ||| ||| ||||| ||| | |||| |||||||  || || |||||||||||||||||||| | |||||||||||    
T  16915195 tgatgacacgtcatcttacgttattcttaacatgttttttagtatttttttagtagggaataacaacaaaaaggaggagtattagaacgattgcctatga 16915294  T
Q  345 tt 346  Q
    ||    
T  16915295 tt 16915296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 21333070 - 21333171
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    ||||| |||||||||||||  ||||| |||  || |||| || ||| ||||| |||| |||||||| ||||||||| ||||||| | | |||||||||||    
T  21333070 ttgatgacatgtcatcttatgttattcttaatatgttttgcacttagtttcaataggttttagcaggaaaaaggagaagtattaaaacgattgcctatga 21333169  T
Q  345 tt 346  Q
    ||    
T  21333170 tt 21333171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 17016814 - 17016862
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttatttt 294  Q
    |||| ||||||||||| || ||||| |||||||||||||||||||||||    
T  17016814 tgataacatgtcatctcacgttattcttagcatatttttcagttatttt 17016862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 26581660 - 26581620
Alignment:
Q  256 tcatcttacattatttttagcatatttttcagttattttca 296  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  26581660 tcatcttacattattcttagcatgtttttcagttattttca 26581620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 21536915 - 21536954
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttatttt 294  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  21536915 gtcatcttacgttatttttagcatatttttcagtcatttt 21536954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 22626163 - 22626254
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||| ||||| ||||||| ||||| | || |||| |||||  |||| ||||||||  |||||||||||||| | || |||||||||    
T  22626163 gtcatcttacgttattcttagcatgtttttgaattttttttagtagcttttaccagcaaaacagaggagtattagagaatttacctatgatt 22626254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 22624911 - 22624956
Alignment:
Q  291 ttttcagtagggtttagcagcaaaaaggaggagtattagagcaatt 336  Q
    ||||||||||| |||| |||||| || |||||||||||||||||||    
T  22624911 ttttcagtaggttttaccagcaacaaagaggagtattagagcaatt 22624956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 27116230 - 27116323
Alignment:
Q  253 atgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||| || || ||| ||| ||||||| | ||||| |||||| |||| ||  |||| ||| ||||||||||| ||||| ||||||||    
T  27116230 atgtcatcttacgtttttcttaacatgtttttcaatcatttttagtaggttttaccataaaaacggatgagtattagagaaattgtctatgatt 27116323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 7221615 - 7221563
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttca 296  Q
    |||||| |||||||||||||| ||||| ||| ||| ||||||||| |||||||    
T  7221615 gttgataacatgtcatcttacgttattcttaacatgtttttcagtcattttca 7221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 13267939 - 13267855
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    |||| |||||||||||||| ||||| ||| ||||||||  ||| | || ||||| | ||||| |||||||| || ||||||||||    
T  13267939 tgattacatgtcatcttacgttattcttatcatattttctagtcaattgcagtaagttttagtagcaaaaaagatgagtattaga 13267855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 16114885 - 16114797
Alignment:
Q  258 atcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||| ||||| ||||||| ||||||| | |||||||| | | |||| ||||| ||  || |||||||||||||||| || ||||||    
T  16114885 atcttacgttattcttagcatgtttttcaatcattttcagcatgttttaccagcataacagatgagtattagagcaatttcccatgatt 16114797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 20033118 - 20033158
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttca 286  Q
    |||| |||||| ||||||| |||||||||||||||||||||    
T  20033118 tgatgacatgttatcttacgttatttttagcatatttttca 20033158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 21848703 - 21848623
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||| |||||||||  |||| | ||||  |||  |||||||  ||||||||||||||||||||| |||||||    
T  21848703 ttattcttagcatgtttttcagtcgtttttaataggtgttattagcaaaacagaggagtattagagcaattgcttatgatt 21848623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 24689336 - 24689296
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatattttt 284  Q
    |||||| || |||||||||||||||||||||| ||||||||    
T  24689336 gttgatgacttgtcatcttacattatttttagtatattttt 24689296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 25959459 - 25959559
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||||||||| |||| || ||| |||||  ||||||||||| |||| | ||||||   | |||||||||| ||| | ||||||||    
T  25959459 tgatgacaagtcatcttacattattcttaggatgtttctcagtctttttcagtaggttttaccggcaaaacatatgagtattagatcaactacctatgat 25959558  T
Q  346 t 346  Q
    |    
T  25959559 t 25959559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 5818 - 5727
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||||| | ||||||||| ||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||| |||||| ||||||||    
T  5818 gtcatctttcgttatttttaacatgtttttcagttatttttagtaggatttagaagcaaaaaggaggagtattagaacaattgtctatgatt 5727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 10092 - 10193
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatga 344  Q
    |||||||||  |||||||||  |||| |||||||  |||||||| |||||||||||| ||||  |||||||  ||||||||||||| |||||| ||||||    
T  10092 ttgatcacagatcatcttacgctattattagcatgcttttcagtcattttcagtaggttttactagcaaaacagaggagtattagatcaattgtctatga 10191  T
Q  345 tt 346  Q
    ||    
T  10192 tt 10193  T

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Target: scaffold0016 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 4894 - 4821
Alignment:
Q  273 tagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  4894 tagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 4821  T

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Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 192223 - 192119
Alignment:
Q  242 tagttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgccta 341  Q
    |||||||| ||| |||||||||| |||||||||||||  |||||||| ||||||| |||| ||||||||||||| | |||||| ||||||| ||||| ||    
T  192223 tagttgatgacaggtcatcttacgttatttttagcatggttttcagtcattttcaataggttttagcagcaaaatgaaggagtgttagagcgattgctta 192124  T
Q  342 tgatt 346  Q
    |||||    
T  192123 tgatt 192119  T

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Target: scaffold0555 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 6551 - 6466
Alignment:
Q  245 ttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattaga 330  Q
    ||||| |||||| ||||||| ||||| ||||||| ||||||||||||||||| |||| ||||||| |||||| |||||||||||||    
T  6551 ttgatgacatgttatcttacgttattcttagcatgtttttcagttattttcaataggatttagcaacaaaaatgaggagtattaga 6466  T

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Target: scaffold0024 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 41416 - 41336
Alignment:
Q  266 ttatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||| ||||||| ||||||||||||||| |||||| |||| ||||||||  ||||||||||||| |||||||||||||||    
T  41416 ttattcttagcatgtttttcagttatttttagtaggttttaccagcaaaacagaggagtattagatcaattgcctatgatt 41336  T

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Target: scaffold0019 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 182511 - 182611
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||||||||||||| ||| ||  || ||| ||||||||||  ||| |||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  182511 tgatgacatgtcatcttatatttttgataacatgtttttcagtttattttagtaggatttagcagcaaaaaggaggagtattagaacgattgcctatgat 182610  T
Q  346 t 346  Q
    |    
T  182611 t 182611  T

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Target: scaffold0258 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 20252 - 20352
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| ||| |||||||||| ||||| ||||||| ||||||| || | || ||||||   |||||||||||||||||||||||||| | ||||||||||||    
T  20252 tgatgacaagtcatcttacgttattcttagcatgtttttcaattttatttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatgat 20351  T
Q  346 t 346  Q
    |    
T  20352 t 20352  T

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Target: scaffold0043 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 88436 - 88536
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 345  Q
    |||| |||||||||||||| ||||| ||||||| ||||||| | |||||||||||| |||| ||  ||||  ||||||| |||||||||||| |||||||    
T  88436 tgatgacatgtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccaaaaaaatagaggagtcttagagcaattgtctatgat 88535  T
Q  346 t 346  Q
    |    
T  88536 t 88536  T

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Target: scaffold0111 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 21503 - 21437
Alignment:
Q  280 tttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||| |||| ||||||| |||||||    
T  21503 tttttcagttaatttcagtaggttttagcagcaaaaaggatgagtagtagaacaattgcttatgatt 21437  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 342
Target Start/End: Original strand, 243829 - 243926
Alignment:
Q  244 gttgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctat 342  Q
    |||||| |||| ||||||||| ||||| ||||||||||||| ||| ||||| |||||| ||||  |||||||  |||||||||||||||||||| ||||    
T  243829 gttgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtattagagcaattgtctat 243926  T

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Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 23133 - 23036
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 343  Q
    |||| ||| |||||||||   |||| ||||||| | ||||||||||||| | ||||  |||||| |||||||||||||||||||| | ||||||||||    
T  23133 tgatgacaggtcatcttatgctattcttagcatgtatttcagttattttaattaggtgttagcaccaaaaaggaggagtattagaacgattgcctatg 23036  T

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Target: scaffold0386 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 4881 - 4964
Alignment:
Q  255 gtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgc 338  Q
    |||||||||| ||||| ||||||| ||||||||| | ||| |||||| |||| |||||||   ||||||||||||| |||||||    
T  4881 gtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagtagaggagtattagatcaattgc 4964  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 95687 - 95621
Alignment:
Q  280 tttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgatt 346  Q
    ||||||||| | ||||| | || |||||||||||||| ||||||||||||| | |||||||||||||    
T  95687 tttttcagtcaatttcaatgggttttagcagcaaaaaagaggagtattagaacgattgcctatgatt 95621  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 369261 - 369298
Alignment:
Q  257 catcttacattatttttagcatatttttcagttatttt 294  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  369261 catcttacattatttttagcatgtttttcagtcatttt 369298  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 290
Target Start/End: Complemental strand, 24082 - 24043
Alignment:
Q  251 acatgtcatcttacattatttttagcatatttttcagtta 290  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  24082 acatgtcatcttacattatttttagcatgtttttaagtta 24043  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 75941 - 75987
Alignment:
Q  101 ctattcttgatatcaaacaccaatgggtttgctggttggaacccaag 147  Q
    ||||||||||| ||||||||||  ||||||||||||||||| |||||    
T  75941 ctattcttgatgtcaaacaccaccgggtttgctggttggaaaccaag 75987  T

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Target: scaffold0637 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 7483 - 7423
Alignment:
Q  246 tgatcacatgtcatcttacattatttttagcatatttttcagttattttcagtagggttta 306  Q
    |||| |||||||| ||||||||||| | ||||| ||||||||| ||||| |||||| ||||    
T  7483 tgatgacatgtcaacttacattattgtaagcatgtttttcagtcatttttagtaggtttta 7423  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 346
Target Start/End: Original strand, 12858 - 12886
Alignment:
Q  318 gaggagtattagagcaattgcctatgatt 346  Q
    |||||||||||||||||||||||||||||    
T  12858 gaggagtattagagcaattgcctatgatt 12886  T

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