View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19613_high_30 (Length: 267)
Name: NF19613_high_30
Description: NF19613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19613_high_30 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 52833720 - 52833960
Alignment:
| Q |
17 |
acgtaggggctaaagcacctaatccttgggcaattgctggagccgccaagcctgtcataacattcaaataactaagatattgatactatctcacacttgg |
116 |
Q |
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| T |
52833720 |
acgtaggggctaaagcacctaatccttgggcaattgctggagccgccaagcctgtcataacattcaaataactaagatattgatactatctcacacttgg |
52833819 |
T |
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| Q |
117 |
gttcgataaagatatgtgttagatatgcagatatatacctccggtaatagccatcacggttcctccggttacagcagctgctcctacaatacctccacgc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52833820 |
gttcgataaagatatgtgttagatatgcagatatatacctccggtaatagccatcacggttcctccggttacagcagctgctcctacaatacctccacgc |
52833919 |
T |
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| Q |
217 |
ttccatttatcccaacttgtttctgaaactatagattcttc |
257 |
Q |
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| T |
52833920 |
ttccatttatcccaacttgtttctgaaactatagattcttc |
52833960 |
T |
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