View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19613_low_22 (Length: 335)

Name: NF19613_low_22
Description: NF19613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19613_low_22
NF19613_low_22
[»] chr7 (33 HSPs)
chr7 (12-239)||(1072371-1072598)
chr7 (85-319)||(7955011-7955256)
chr7 (225-312)||(1072271-1072358)
chr7 (182-320)||(3953046-3953184)
chr7 (182-319)||(30259070-30259207)
chr7 (182-319)||(31231618-31231757)
chr7 (182-319)||(24836050-24836187)
chr7 (182-320)||(29277867-29278004)
chr7 (209-313)||(45997539-45997643)
chr7 (197-313)||(12142228-12142345)
chr7 (186-308)||(30594734-30594856)
chr7 (182-319)||(34052309-34052446)
chr7 (209-318)||(37093799-37093908)
chr7 (209-320)||(9285745-9285856)
chr7 (209-320)||(9289812-9289923)
chr7 (224-319)||(10936516-10936611)
chr7 (182-320)||(35339282-35339420)
chr7 (224-318)||(40358146-40358240)
chr7 (241-319)||(38883251-38883331)
chr7 (181-280)||(10398390-10398487)
chr7 (182-319)||(20184242-20184380)
chr7 (182-319)||(39617845-39617983)
chr7 (182-320)||(24123759-24123899)
chr7 (109-164)||(25705361-25705416)
chr7 (243-319)||(25742494-25742572)
chr7 (200-318)||(33749674-33749793)
chr7 (241-320)||(16876517-16876598)
chr7 (181-221)||(33355166-33355206)
chr7 (209-318)||(48103399-48103505)
chr7 (11-46)||(7955328-7955363)
chr7 (209-308)||(31521556-31521655)
chr7 (252-319)||(38528482-38528553)
chr7 (200-281)||(38989093-38989172)
[»] chr1 (34 HSPs)
chr1 (182-319)||(50162542-50162680)
chr1 (182-320)||(19954915-19955053)
chr1 (182-313)||(27240928-27241059)
chr1 (182-319)||(51789601-51789736)
chr1 (182-319)||(2854536-2854673)
chr1 (182-319)||(23698506-23698643)
chr1 (209-319)||(3607760-3607870)
chr1 (182-319)||(5189499-5189636)
chr1 (182-318)||(14387019-14387155)
chr1 (209-319)||(42561326-42561436)
chr1 (182-319)||(40647146-40647285)
chr1 (182-319)||(48954218-48954355)
chr1 (182-319)||(50627161-50627298)
chr1 (209-319)||(2125101-2125211)
chr1 (182-318)||(27928302-27928438)
chr1 (209-318)||(6079415-6079524)
chr1 (224-319)||(957618-957714)
chr1 (209-319)||(15324656-15324767)
chr1 (209-317)||(27670175-27670283)
chr1 (182-319)||(27926255-27926393)
chr1 (182-319)||(9978055-9978193)
chr1 (209-318)||(47940601-47940711)
chr1 (241-309)||(48645075-48645145)
chr1 (241-320)||(9895282-9895363)
chr1 (209-319)||(19797012-19797122)
chr1 (182-281)||(49284298-49284395)
chr1 (224-318)||(4299438-4299535)
chr1 (209-319)||(51276726-51276836)
chr1 (241-319)||(1387808-1387888)
chr1 (224-318)||(29598354-29598448)
chr1 (110-162)||(74011-74062)
chr1 (241-318)||(10262411-10262490)
chr1 (225-319)||(26208454-26208549)
chr1 (290-318)||(28823217-28823245)
[»] chr4 (26 HSPs)
chr4 (182-320)||(13204406-13204544)
chr4 (182-319)||(1298942-1299079)
chr4 (182-318)||(42274496-42274633)
chr4 (182-319)||(530673-530810)
chr4 (182-319)||(18417687-18417824)
chr4 (182-319)||(21048709-21048845)
chr4 (182-312)||(4552822-4552952)
chr4 (208-318)||(35360707-35360817)
chr4 (209-319)||(20435171-20435281)
chr4 (182-313)||(23928572-23928702)
chr4 (182-320)||(24915798-24915940)
chr4 (182-312)||(32318724-32318854)
chr4 (209-319)||(28809877-28809988)
chr4 (248-319)||(52587383-52587454)
chr4 (243-319)||(52824269-52824347)
chr4 (224-318)||(4895003-4895097)
chr4 (209-319)||(27434640-27434750)
chr4 (182-312)||(55107561-55107691)
chr4 (209-319)||(24969572-24969685)
chr4 (110-164)||(15788535-15788589)
chr4 (208-318)||(16995584-16995694)
chr4 (241-318)||(3422490-3422569)
chr4 (209-318)||(4688278-4688388)
chr4 (251-311)||(23481992-23482054)
chr4 (208-319)||(24294497-24294608)
chr4 (292-320)||(42020204-42020232)
[»] chr3 (45 HSPs)
chr3 (208-319)||(12838107-12838218)
chr3 (182-320)||(3970495-3970633)
chr3 (182-319)||(26906484-26906621)
chr3 (182-319)||(36278760-36278897)
chr3 (182-320)||(13078167-13078305)
chr3 (182-319)||(21969161-21969298)
chr3 (182-319)||(21991597-21991734)
chr3 (182-319)||(32237398-32237535)
chr3 (182-281)||(35368803-35368900)
chr3 (182-319)||(22176138-22176276)
chr3 (182-319)||(45487829-45487966)
chr3 (209-319)||(25446279-25446390)
chr3 (182-319)||(22101194-22101332)
chr3 (224-319)||(25488387-25488482)
chr3 (224-319)||(25561041-25561136)
chr3 (215-318)||(42105420-42105523)
chr3 (209-318)||(12789637-12789746)
chr3 (241-319)||(36657494-36657574)
chr3 (209-318)||(44611412-44611521)
chr3 (182-312)||(55340297-55340428)
chr3 (209-318)||(4072304-4072414)
chr3 (241-312)||(10017151-10017224)
chr3 (248-319)||(36329248-36329321)
chr3 (243-318)||(38125242-38125319)
chr3 (209-312)||(10254605-10254709)
chr3 (241-319)||(10441319-10441399)
chr3 (241-319)||(36822821-36822901)
chr3 (209-319)||(8831770-8831881)
chr3 (241-318)||(44920707-44920786)
chr3 (214-319)||(404074-404180)
chr3 (224-319)||(43150510-43150605)
chr3 (224-319)||(45712949-45713044)
chr3 (243-312)||(10117552-10117624)
chr3 (243-312)||(297600-297669)
chr3 (224-319)||(43639127-43639223)
chr3 (208-276)||(46222058-46222124)
chr3 (182-319)||(50099462-50099601)
chr3 (109-160)||(20097506-20097556)
chr3 (241-318)||(26976903-26976982)
chr3 (182-312)||(1476555-1476685)
chr3 (241-319)||(39850405-39850486)
chr3 (243-318)||(46664207-46664284)
chr3 (243-319)||(157031-157110)
chr3 (251-319)||(5529921-5529992)
chr3 (182-310)||(37506131-37506258)
[»] scaffold0122 (1 HSPs)
scaffold0122 (182-319)||(45864-46001)
[»] chr2 (24 HSPs)
chr2 (182-319)||(12850546-12850683)
chr2 (215-319)||(9933606-9933710)
chr2 (182-318)||(45408656-45408792)
chr2 (209-319)||(3116906-3117016)
chr2 (209-319)||(16705763-16705873)
chr2 (182-319)||(2818696-2818833)
chr2 (182-319)||(24101836-24101973)
chr2 (182-319)||(9281351-9281488)
chr2 (182-319)||(34455915-34456052)
chr2 (209-319)||(23835906-23836017)
chr2 (209-318)||(1924011-1924121)
chr2 (209-318)||(9850789-9850897)
chr2 (110-164)||(27867553-27867607)
chr2 (209-319)||(27920602-27920712)
chr2 (208-307)||(42713807-42713907)
chr2 (241-318)||(34490487-34490566)
chr2 (249-319)||(20892914-20892987)
chr2 (208-281)||(40362553-40362623)
chr2 (241-318)||(22269753-22269832)
chr2 (182-319)||(7737094-7737232)
chr2 (241-320)||(29229424-29229506)
chr2 (241-320)||(29342724-29342806)
chr2 (208-318)||(43475975-43476087)
chr2 (290-318)||(37340997-37341025)
[»] chr6 (17 HSPs)
chr6 (224-319)||(885415-885510)
chr6 (182-318)||(15546663-15546799)
chr6 (209-319)||(8091092-8091202)
chr6 (182-319)||(21379945-21380082)
chr6 (224-319)||(3369015-3369110)
chr6 (183-319)||(4238882-4239020)
chr6 (208-320)||(13439724-13439837)
chr6 (241-319)||(11687204-11687284)
chr6 (182-319)||(29609031-29609168)
chr6 (209-319)||(14393591-14393704)
chr6 (208-320)||(31764355-31764467)
chr6 (182-318)||(13172578-13172713)
chr6 (241-310)||(7808648-7808719)
chr6 (224-319)||(18998162-18998258)
chr6 (249-318)||(20501737-20501808)
chr6 (182-319)||(4890484-4890622)
chr6 (208-288)||(30905039-30905117)
[»] chr8 (18 HSPs)
chr8 (209-319)||(17426659-17426771)
chr8 (182-319)||(37114268-37114405)
chr8 (182-319)||(38520048-38520185)
chr8 (182-319)||(38629504-38629641)
chr8 (182-318)||(40891044-40891180)
chr8 (182-319)||(15882230-15882368)
chr8 (209-319)||(29780990-29781100)
chr8 (182-319)||(8210353-8210490)
chr8 (182-319)||(12234496-12234634)
chr8 (208-320)||(38405167-38405280)
chr8 (224-319)||(23940850-23940946)
chr8 (182-318)||(24741827-24741963)
chr8 (209-312)||(4262007-4262110)
chr8 (113-161)||(41510355-41510403)
chr8 (243-319)||(33100708-33100786)
chr8 (215-311)||(36898187-36898287)
chr8 (209-319)||(24211309-24211419)
chr8 (182-320)||(35467200-35467337)
[»] chr5 (23 HSPs)
chr5 (209-313)||(1456053-1456157)
chr5 (182-318)||(12744857-12744993)
chr5 (182-318)||(33629349-33629487)
chr5 (224-319)||(8364676-8364771)
chr5 (209-319)||(1138589-1138699)
chr5 (209-319)||(21261973-21262083)
chr5 (208-319)||(35276322-35276434)
chr5 (182-318)||(13754295-13754431)
chr5 (209-319)||(37655183-37655292)
chr5 (241-319)||(15855873-15855953)
chr5 (241-319)||(16472985-16473065)
chr5 (182-319)||(20476461-20476598)
chr5 (241-319)||(35420673-35420753)
chr5 (182-318)||(4266013-4266149)
chr5 (182-318)||(12807942-12808078)
chr5 (210-319)||(24397278-24397387)
chr5 (209-319)||(37552339-37552449)
chr5 (182-318)||(43539138-43539274)
chr5 (209-312)||(35806972-35807075)
chr5 (228-312)||(21259780-21259864)
chr5 (181-232)||(10304773-10304824)
chr5 (182-238)||(10132365-10132421)
chr5 (249-318)||(12191423-12191494)
[»] scaffold0163 (1 HSPs)
scaffold0163 (209-319)||(1970-2081)
[»] scaffold0086 (1 HSPs)
scaffold0086 (182-319)||(48156-48293)
[»] scaffold0653 (1 HSPs)
scaffold0653 (209-320)||(3424-3535)
[»] scaffold0137 (1 HSPs)
scaffold0137 (228-313)||(10152-10236)
[»] scaffold0107 (1 HSPs)
scaffold0107 (182-319)||(51093-51230)
[»] scaffold0188 (1 HSPs)
scaffold0188 (209-318)||(7117-7226)
[»] scaffold0043 (1 HSPs)
scaffold0043 (109-162)||(57827-57879)
[»] scaffold0006 (1 HSPs)
scaffold0006 (257-319)||(72348-72412)


Alignment Details
Target: chr7 (Bit Score: 183; Significance: 6e-99; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 12 - 239
Target Start/End: Complemental strand, 1072598 - 1072371
Alignment:
Q  12 aaaggggtttagtatagtatataacaataataaattagggtggcatgaaatatcgcataataataaatagttcgtagagaacgatcgcactttcctacaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1072598 aaaggggtttagcatagtatataacaataataaattagggtggcatgaaatatcgcataataataaatagttcgtagagaacgatcgcactttcctacaa 1072499  T
Q  112 aaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtgnnnnnnntatttggttcaaaacttaggtgcatttccttatatatttt 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||| ||||| ||||||    
T  1072498 aaataacaatcgatatggaacacacatatacgaaagaaatatagtagaaagtgaaaaaaatatttggttcaaaatttaggtgcattttcttatgtatttt 1072399  T
Q  212 ttgtatggtttataactaaattcaccat 239  Q
    |||||||||| |||||||||||||||||    
T  1072398 ttgtatggttcataactaaattcaccat 1072371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 85 - 319
Target Start/End: Complemental strand, 7955256 - 7955011
Alignment:
Q  85 gtagagaacgatcgcactttcctacaaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtg-------nnnnnnntatttg 177  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||               |   |    
T  7955256 gtagataacgatcgaactttccagcaaaaataacaatcgacatggaacacacatatacaaaagaaatatagtagaaagtgaaggaaaaaaaaaaaaaaag 7955157  T
Q  178 gttcaaaacttaggtgcatttccttatatattttt----tgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtt 273  Q
    | |||||| |||||||||||||||| | | |||||    ||||||||| ||||||||||| | ||  |||||| | |||||||||||| |||||||||||    
T  7955156 gctcaaaatttaggtgcatttcctttttttttttttttgtgtatggttcataactaaatttatca--tgatttccacaaatctataatcttctctgagtt 7955059  T
Q  274 tgttatat--ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
    | ||||||  | ||||||| ||||||||||||||||||||||||||||    
T  7955058 ttttatataaaaaaaaaatgtatttttagttaagaaccatacaaaaag 7955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 1072358 - 1072271
Alignment:
Q  225 aactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaaccata 312  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  1072358 aactaaattcaccatgtgatttcctcaaatctataatttcctctgagtttgttatataaaaaaaatgtatttttaattaagaaccata 1072271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 3953046 - 3953184
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||| || |||| ||||||||| |||||||||||||||  |||||| |||||||| ||||||||| |  ||||||||||||    
T  3953046 aaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcacca--tgatttcctcaaatccataattttcacaaagtttgttatat 3953143  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaagt 320  Q
      ||||||||  |||||||||||||||||||||||||||||    
T  3953144 ccaaaaaatatgtatttttagttaagaaccatacaaaaagt 3953184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 30259070 - 30259207
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  ||||  |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  30259070 aaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 30259167  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  ||||||||||||||||||||||||||||    
T  30259168 ccaaaaaatatgtatttttagttaagaaccatacaaaaag 30259207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 31231618 - 31231757
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||||||||||||  |||||||||||||||  |||||| |||||||| |||||||||||  ||||||||||||    
T  31231618 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcacca--tgatttcctcaaatccataattttctcaaagtttgttatat 31231715  T
Q  282 at--aaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
     |  ||||||||  |||||||||||||||||||||| |||||    
T  31231716 gtccaaaaaatatgtatttttagttaagaaccatacgaaaag 31231757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 24836187 - 24836050
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  24836187 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 24836090  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  ||||||||||| |||||||||| |||||    
T  24836089 ccaaaaaatatgtatttttagttnagaaccatacgaaaag 24836050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 29278004 - 29277867
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||||||||||  ||||| ||| |||||||||||||||  |||||| || ||||| | |||||||||  | |||||| |||    
T  29278004 aaaacttaggtacaattccttatatattttccgtatgatttttaactaaattcacca--tgatttccttaaatccaaaattttctcaaactttgttgtat 29277907  T
Q  282 ataaaa-aatatatttttagttaagaaccatacaaaaagt 320  Q
      |||| | | |||||||||||||||||||||||||||||    
T  29277906 ccaaaacagtgtatttttagttaagaaccatacaaaaagt 29277867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 45997539 - 45997643
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||||||||||||  |||||||||||||||  |||||| |||||||| |||||||||||  ||||| ||||||  ||||||||  |||||||||||||||    
T  45997539 tttttgtatggttcttaactaaattcacca--tgatttcctcaaatccataattttctcaaagtttattatatccaaaaaatatgtatttttagttaaga 45997636  T
Q  307 accatac 313  Q
    |||||||    
T  45997637 accatac 45997643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 12142345 - 12142228
Alignment:
Q  197 ttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa---atata 293  Q
    |||||||| | ||||| |||| |||  |||||||||||||||||  ||||||||||||| |||||||||||  || |||||||||  |||||   |||||    
T  12142345 ttccttatgtgtttttcgtatagttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagattgttatatccaaaaatatatata 12142248  T
Q  294 tttttagttaagaaccatac 313  Q
    ||||||||||||||||||||    
T  12142247 tttttagttaagaaccatac 12142228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 30594856 - 30594734
Alignment:
Q  186 cttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataa 285  Q
    ||||||| || ||||||| ||  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  ||    
T  30594856 cttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaa 30594759  T
Q  286 aaaata--tatttttagttaagaac 308  Q
    ||||||  |||||||||||||||||    
T  30594758 aaaatatgtatttttagttaagaac 30594734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 34052446 - 34052309
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  || ||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  34052446 aaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatat 34052349  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  34052348 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 34052309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 37093908 - 37093799
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaat--atatttttagttaaga 306  Q
    |||| ||||||||| |||||||||||||||||  |||| ||||||| ||||||||||||  ||||||||||||  |||||||  ||||||||| ||||||    
T  37093908 ttttcgtatggtttttaactaaattcaccatg--atttcctcaaatttataattttctcaaagtttgttatatccaaaaaatatatatttttaattaaga 37093811  T
Q  307 accatacaaaaa 318  Q
    | ||||| ||||    
T  37093810 atcatacgaaaa 37093799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 9285745 - 9285856
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||||||||||||  ||| |||||||||||||  |||| ||||||| ||||||||| ||  ||||||||||||  ||||||||  |||||||| ||||||    
T  9285745 tttttgtatggttcttaattaaattcaccatg--atttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaaga 9285842  T
Q  307 accatacaaaaagt 320  Q
    ||||||| ||||||    
T  9285843 accatacgaaaagt 9285856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 9289812 - 9289923
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||||||||||||  ||| |||||||||||||  |||| ||||||| ||||||||| ||  ||||||||||||  ||||||||  |||||||| ||||||    
T  9289812 tttttgtatggttcttaattaaattcaccatg--atttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaaga 9289909  T
Q  307 accatacaaaaagt 320  Q
    ||||||| ||||||    
T  9289910 accatacgaaaagt 9289923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 10936516 - 10936611
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  | || ||||||||||||||||||||  |||||||||||   ||||||||  |||||||||||||||||||||| |||||    
T  10936516 taactaaattcaccatg--acttcctcaaatctataattttctcaaagtttgttataaccaaaaaatatgtatttttagttaagaaccatacgaaaag 10936611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 35339282 - 35339420
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||| ||||  ||||  ||||||| |||||||||||  ||||||||||||    
T  35339282 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatg--atttcttcaaatccataattttctcaaagtttgttatat 35339379  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaagt 320  Q
      ||||||||  |||||||| ||||||||||||| ||||||    
T  35339380 ccaaaaaatatgtatttttatttaagaaccatacgaaaagt 35339420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 40358240 - 40358146
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaa 318  Q
    |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||    
T  40358240 taactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatatcaaaaaaatatgcatttttagttaagaaccatacgaaaa 40358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 38883331 - 38883251
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  38883331 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaag 38883251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 10398487 - 10398390
Alignment:
Q  181 caaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttata 280  Q
    ||||||||||||||||||||||||||  |||||||||||||  ||||||||||  |||  |||||| |||||||  ||||| |||||  |||||||||||    
T  10398487 caaaacttaggtgcatttccttatatgctttttgtatggttcttaactaaattatcca--tgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 20184242 - 20184380
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||| ||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  20184242 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 20184339  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
       | |||| || |||||||||||||||| ||||| |||||    
T  20184340 ccaaaaaaatatgtatttttagttaagaatcatacgaaaag 20184380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 39617845 - 39617983
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || || |||| || || || ||||||||  |||||||||||||||  |||||| ||| |||| |||||||||||  ||||||||||||    
T  39617845 aaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcacca--tgatttcctccaatccataattttctcaaagtttgttatat 39617942  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
       | |||| || ||||||||||||||||| |||| |||||    
T  39617943 ccaaaaaaatatttatttttagttaagaactatacgaaaag 39617983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 24123759 - 24123899
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || |||||||| || |||||||||||||  ||||||||   || |||  |||| |||||||| |||||||||||  ||||||||||||    
T  24123759 aaaatttaggtacaattccttatgtactttttgtatggttcctaactaaaaatactatg--atttcctcaaatccataattttctcaaagtttgttatat 24123856  T
Q  282 --ataaaaaata--tatttttagttaagaaccatacaaaaagt 320  Q
      | ||||||||  |||||||| ||||||||||||| ||||||    
T  24123857 ccaaaaaaaatatgtatttttaattaagaaccatacgaaaagt 24123899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 25705416 - 25705361
Alignment:
Q  109 caaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtg 164  Q
    |||||||||||||| |||| |||||||||||||| || |||||| |||||||||||    
T  25705416 caaaaataacaatcaacatagaacacacatatacaaatgaaataaagtagaaagtg 25705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 25742494 - 25742572
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||| |||||||| |||||||||||  ||||||||||||  ||||||||  ||||||||||||| |||||||| |||||    
T  25742494 atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaacaaccatacgaaaag 25742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 33749793 - 33749674
Alignment:
Q  200 cttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaa--aat-atattt 296  Q
    |||| |||||||||||||||||  |||||||||||| ||  |||||| || ||||  |||||||||||  ||||| |||||| |||||  ||| ||||||    
T  33749793 cttaaatattttttgtatggttcttaactaaattcatca--tgatttccttaaattcataattttctcaaagtttattatatctaaaaataatgatattt 33749696  T
Q  297 ttagttaagaaccatacaaaaa 318  Q
    ||||||||||| ||||| ||||    
T  33749695 ttagttaagaatcatacgaaaa 33749674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 16876517 - 16876598
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaagaaccatacaaaaagt 320  Q
    |||||||||||||||  |||||||||  |||||||||||||  |||||  ||||||||||||| || ||||||| |||||||    
T  16876517 tgattttctcaaatccgtaattttcttagagtttgttatatccataaaggatatatttttagtcaaaaaccatataaaaagt 16876598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 33355166 - 33355206
Alignment:
Q  181 caaaacttaggtgcatttccttatatattttttgtatggtt 221  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  33355166 caaaacttaggtgcatttccttatgtactttttgtatggtt 33355206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 48103505 - 48103399
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||||||||||||  |||||||||||     ||||||| |||||||| |||||  ||||  ||||||||||||  ||||||||  |||||||||||||||    
T  48103505 tttttgtatggttcttaactaaattc-----gtgatttcctcaaatccataataatctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 48103411  T
Q  307 accatacaaaaa 318  Q
    | ||||| ||||    
T  48103410 atcatacgaaaa 48103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 7955363 - 7955328
Alignment:
Q  11 caaaggggtttagtatagtatataacaataataaat 46  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7955363 caaaggggtttagcatagtatataacaataataaat 7955328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 31521556 - 31521655
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||| ||||||||  |||||||||| ||||||  ||||||||||||  |||||||| ||  ||||| ||||||  |||||||||  ||||||||||||||    
T  31521556 ttttcgtatggttcttaactaaatttaccatg--attttctcaaattcataattttttcaaagtttattatatccaaaaaatattcatttttagttaaga 31521653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 38528482 - 38528553
Alignment:
Q  252 aatctataattttctctgagtttgttatatataaaaaatatat----ttttagttaagaaccatacaaaaag 319  Q
    |||| |||||||||||  ||||||||||||| |||||| ||||    ||||||||||||||||||| |||||    
T  38528482 aatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccatacgaaaag 38528553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 38989093 - 38989172
Alignment:
Q  200 cttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||| ||||||| |||| |||| |||||||||| | |||   ||||||| |||||||||||||||||  ||||||||||||    
T  38989093 cttatgtatttttcgtatagtttttaactaaatttatcata--attttcttaaatctataattttctcaaagtttgttatat 38989172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 50162542 - 50162680
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  ||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||  ||||||||||||    
T  50162542 aaaacttaggtacaattccttaggtattttttgtatggtttttaattaaattcacc--gtgattttctcaaatctataattttctcaaagtttgttatat 50162639  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
       | |||| || || |||||||||||||||||||||||||    
T  50162640 ccaaaaaaatatgtaattttagttaagaaccatacaaaaag 50162680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 19954915 - 19955053
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||| |  |||| |||| |||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  19954915 aaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 19955012  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaagt 320  Q
      |||||||||  ||||||||||||||||||||||||||||    
T  19955013 ccaaaaaatatgtatttttagttaagaaccatacaaaaagt 19955053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 27240928 - 27241059
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  27240928 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 27241025  T
Q  282 --ataaaaaatatatttttagttaagaaccatac 313  Q
      | |||| |||||||||||||||||||||||||    
T  27241026 ccaaaaaatatatatttttagttaagaaccatac 27241059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 51789601 - 51789736
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||| |||||||||||||||||  |||| ||||| || |||||||||||  ||| ||||||||    
T  51789601 aaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatg--atttcctcaattccataattttctcaaagtatgttatat 51789698  T
Q  282 ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
     |||||||| | |||||||||||||||||||| |||||    
T  51789699 ctaaaaaatgtgtttttagttaagaaccatacgaaaag 51789736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 2854536 - 2854673
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  2854536 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 2854633  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  2854634 ccaaaaaatatatatttttagttaagaaccatacgaaaag 2854673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 23698506 - 23698643
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  23698506 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 23698603  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  23698604 ccaaaaaatatatatttttagttaagaaccatacgaaaag 23698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 3607760 - 3607870
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||||||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  3607760 tttttgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 3607857  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  3607858 accatacgaaaag 3607870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 5189636 - 5189499
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || ||||||| ||  |||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  ||||||||||||    
T  5189636 aaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatat 5189539  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  5189538 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 5189499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 14387019 - 14387155
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||| ||   ||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||| ||||||    
T  14387019 aaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttattatat 14387116  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  |||||||||||||||||||||| ||||    
T  14387117 ccaaaaaatatgtatttttagttaagaaccatacgaaaa 14387155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 42561326 - 42561436
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||| ||||||||  |||||||||||||||||  ||||  ||| ||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  42561326 ttttcgtatggttcttaactaaattcaccatg--atttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 42561423  T
Q  307 accatacaaaaag 319  Q
    |||||||||||||    
T  42561424 accatacaaaaag 42561436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 40647285 - 40647146
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||| ||| |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  40647285 aaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 40647188  T
Q  282 ataaaaa----atatatttttagttaagaaccatacaaaaag 319  Q
    | |||||    || ||||||||||||||||||| || |||||    
T  40647187 aaaaaaaaaatatgtatttttagttaagaaccacacgaaaag 40647146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 48954218 - 48954355
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  || ||||  |||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  48954218 aaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 48954315  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  48954316 ccaaaaaatatatatttttagttaagaaccatacgaaaag 48954355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 50627298 - 50627161
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||||||  |||| ||||||||  ||||||||   | ||||  |||| |||||||| |||||||||||  ||||||||||||    
T  50627298 aaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaatatcatg--atttcctcaaatccataattttctcaaagtttgttatat 50627201  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||||||||| |||||    
T  50627200 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 50627161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 2125101 - 2125211
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  |||||||||||||||||  ||||| | |||| ||||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  2125101 ttttcgtatggttcttaactaaattcaccatg--atttttttaaatttataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaaga 2125198  T
Q  307 accatacaaaaag 319  Q
    || |||| |||||    
T  2125199 actatacgaaaag 2125211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 27928302 - 27928438
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||| | || |||||||| |  |||||||||||||  |||||||||||||  |||||||| ||| |||| |||||||||||  ||||||||||||    
T  27928302 aaaacttagatacaattccttatgtgctttttgtatggttcttaactaaattcac--tgtgatttcctc-aatccataattttctcaaagtttgttatat 27928398  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaa 318  Q
       | |||| || |||||||||||||||||||||| ||||    
T  27928399 ccaaaaaaatatgtatttttagttaagaaccatacgaaaa 27928438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 6079524 - 6079415
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||| ||||    
T  6079524 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagtgaaga 6079427  T
Q  307 accatacaaaaa 318  Q
    ||| ||| ||||    
T  6079426 accgtacgaaaa 6079415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 957714 - 957618
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat-ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  ||||||||||||| |||||||||||  |||||||||||| | ||||||||  || ||||||||||||| ||||| |||||    
T  957714 taactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatatcaaaaaaaatatgtaattttagttaagaatcatacgaaaag 957618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 15324767 - 15324656
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaag 305  Q
    |||| ||||||||  ||||||||||||| |||  |||| |||||||| |||||||||||  ||||||||||||   | |||| || ||||||||||||||    
T  15324767 ttttcgtatggttcttaactaaattcactatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 15324670  T
Q  306 aaccatacaaaaag 319  Q
    |||||||| |||||    
T  15324669 aaccatacgaaaag 15324656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 27670283 - 27670175
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||| ||||||||| |||||||||||| ||||  |||| || ||||| |||||||||||  ||||| ||||||  |||||||||  ||||||||||||||    
T  27670283 ttttcgtatggtttttaactaaattcatcatg--atttccttaaatccataattttctcaaagttttttatattcaaaaaatatgtatttttagttaaga 27670186  T
Q  307 accatacaaaa 317  Q
    | |||||||||    
T  27670185 atcatacaaaa 27670175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 27926255 - 27926393
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||||||||||  | |||||||| |  |||| ||||||||  |||||||||||||  |||||||| ||||| || |||||||||||  ||||||||||||    
T  27926255 aaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaattcac--tgtgatttcctcaa-tccataattttctcaaagtttgttatat 27926351  T
Q  282 --ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      | |||||||||  ||||||||||||||||||||| |||||    
T  27926352 ccaaaaaaaatatgtatttttagttaagaaccatacgaaaag 27926393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 9978055 - 9978193
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || |||||||| |  |||| ||||| ||  ||||||||||||| |||  |||| |||||||| |||||||||||  ||||||||||||    
T  9978055 aaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattcactatg--atttcctcaaatccataattttctcaaagtttgttatat 9978152  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
       | |||| || |||||||||||||||||||||| |||||    
T  9978153 ccaaaaaaatatgtatttttagttaagaaccatacgaaaag 9978193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 47940601 - 47940711
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 305  Q
    |||| ||||||||  |||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  47940601 ttttcgtatggttcttaactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 47940698  T
Q  306 aaccatacaaaaa 318  Q
    |||||||| ||||    
T  47940699 aaccatacgaaaa 47940711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 48645075 - 48645145
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaacc 309  Q
    |||||| |||||||| |||||||||||  |||||||||||| |||||||||  ||||||||||||||||||    
T  48645075 tgatttcctcaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaacc 48645145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 9895363 - 9895282
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagt 320  Q
    |||||| |||||||  |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||    
T  9895363 tgatttcctcaaatacataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagt 9895282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 19797012 - 19797122
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||| ||||||||   ||||||  |||| |||||||| |||||||| ||  ||||||||||||  ||||||||  |||||||||||||||    
T  19797012 ttttcgtatggtttttaactaaaaataccatg--atttcctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaaga 19797109  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  19797110 accatacgaaaag 19797122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 281
Target Start/End: Original strand, 49284298 - 49284395
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || || ||||  | ||||||||||||||  |||||||||||||||  ||||||||| ||||| |||||||| ||  ||||||||||||    
T  49284298 aaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcacca--tgattttcttaaatccataattttttcaaagtttgttatat 49284395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 318
Target Start/End: Original strand, 4299438 - 4299535
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    ||||||||||||||||   |||| |||||||| |||||||||||  ||||||||||||   | ||||||||  |||||||||||||||||||||| ||||    
T  4299438 taactaaattcaccatt--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaagaaccatacgaaaa 4299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 51276726 - 51276836
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaaga 306  Q
    |||| ||||||||  ||||||||||||  |||  |||| |||||||| |||||||||||  ||||| ||||||  | ||||||| ||||||||| |||||    
T  51276726 ttttcgtatggttcttaactaaattcattatg--atttcctcaaatccataattttctcaaagtttattatataaaaaaaaaatgtatttttagctaaga 51276823  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  51276824 accatacgaaaag 51276836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 1387888 - 1387808
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||  |||||||||||  ||||| ||||||  |||||||||  ||||||||||||||||||||| |||||    
T  1387888 tgatttcctcaaattcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaag 1387808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 29598448 - 29598354
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    ||||||||||||| |||  |||| || ||||| |||||||||||  ||||||||||||  ||||||||  ||||||||||| | |||||||| ||||    
T  29598448 taactaaattcactatg--atttccttaaatccataattttctcaaagtttgttatattaaaaaaatatgtatttttagttgataaccatacgaaaa 29598354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 74011 - 74062
Alignment:
Q  110 aaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaag 162  Q
    ||||||||||||| |||||||||||||||||| |||| || | ||||||||||    
T  74011 aaaaataacaatccacatggaacacacatata-gaaataattgtagtagaaag 74062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 10262490 - 10262411
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaagaaccatacaaaaa 318  Q
    ||||||| ||||||| | |||||| || ||||||| |||||  | |||||||||| ||||||||||||| ||||| ||||    
T  10262490 tgattttttcaaatccacaattttttcagagtttgctatattcacaaaaaatatagttttagttaagaatcatacgaaaa 10262411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 26208549 - 26208454
Alignment:
Q  225 aactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||   ||||  ||||||| |||||||||||  ||||||||||||   | |||| || ||||||||||| |||||||||| |||||    
T  26208549 aactaaattcaccata--atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaaccatacgaaaag 26208454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 318
Target Start/End: Original strand, 28823217 - 28823245
Alignment:
Q  290 tatatttttagttaagaaccatacaaaaa 318  Q
    |||||||||||||||||||||||||||||    
T  28823217 tatatttttagttaagaaccatacaaaaa 28823245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 13204544 - 13204406
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||| || |||| ||||||||| |||||||||||||||  |||||| |||||||| ||||||||| |  ||||||||||||    
T  13204544 aaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcacca--tgatttcctcaaatccataattttcacaaagtttgttatat 13204447  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaagt 320  Q
      ||||||||  |||||||||||||||||||||||||||||    
T  13204446 ccaaaaaatatgtatttttagttaagaaccatacaaaaagt 13204406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 1299079 - 1298942
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  ||||  |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  1299079 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 1298982  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  ||||||||||||||||||||||||||||    
T  1298981 ccaaaaaatatgtatttttagttaagaaccatacaaaaag 1298942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 42274496 - 42274633
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||| ||  |||| ||||||||  |||||||||||||||  |||||| |||||||| |||||||||||  ||||||||||||    
T  42274496 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcacca--tgatttcctcaaatccataattttctcaaagtttgttatat 42274593  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaa 318  Q
       | |||| ||||||||||||||||||||||||| ||||    
T  42274594 ccaaaaaaatatatatttttagttaagaaccatacgaaaa 42274633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 530673 - 530810
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||||||||||||  |||||||||||||||  | |||| |||||||| |||||||||||  ||||||||||||    
T  530673 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcacca--tcatttcctcaaatccataattttctcaaagtttgttatat 530770  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||||||||| |||||    
T  530771 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 530810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 18417824 - 18417687
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||||||||||||  ||| |||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  18417824 aaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 18417727  T
Q  282 ataaaaaat--atatttttagttaagaaccatacaaaaag 319  Q
      |||||||  ||||||||||||||||||||||| |||||    
T  18417726 ccaaaaaatatatatttttagttaagaaccatacgaaaag 18417687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 21048709 - 21048845
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||| ||| ||  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  21048709 aaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcgaagtttgttatat 21048806  T
Q  282 -ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
     | |||| || |||||||||||||||||||||| |||||    
T  21048807 caaaaaatatgtatttttagttaagaaccatacgaaaag 21048845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 4552952 - 4552822
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||||||  ||| |||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||    
T  4552952 aaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatat 4552855  T
Q  282 ataaaaaata--tatttttagttaagaaccata 312  Q
      ||||||||  ||||||||||||| |||||||    
T  4552854 ccaaaaaatatttatttttagttaaaaaccata 4552822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 35360817 - 35360707
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 305  Q
    ||||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  |||||||||||| |||||||||  ||||||||||||||    
T  35360817 tttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaag 35360720  T
Q  306 aaccatacaaaaa 318  Q
    |||||||| ||||    
T  35360719 aaccatacgaaaa 35360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 20435171 - 20435281
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  20435171 ttttcgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcgaagtttgttatatccaaaaaatatgtatttttagttaaga 20435268  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  20435269 accatacgaaaag 20435281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 23928572 - 23928702
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  | ||||| ||||| ||  |||||||||||||||||  |||| |||||||| |||||||||||  | ||||||||||    
T  23928572 aaaacttaggtacaattccttag-tgtttttcgtatgattcttaactaaattcaccatg--atttcctcaaatccataattttctcaaaatttgttatat 23928668  T
Q  282 --ataaaaaatatatttttagttaagaaccatac 313  Q
      | |||||||||||||||||||||||| |||||    
T  23928669 ccaaaaaaaatatatttttagttaagaatcatac 23928702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 24915798 - 24915940
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  24915798 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 24915895  T
Q  282 --ataaaaaata-----tatttttagttaagaaccatacaaaaagt 320  Q
      | ||||||||     |||||||||||||||||||| ||||||||    
T  24915896 ccaaaaaaaataatatgtatttttagttaagaaccat-caaaaagt 24915940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 32318724 - 32318854
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||| |  |||| ||||||||  |||||||||||||||  |||||| |||| ||| |||||||||||  ||||||||||||    
T  32318724 aaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcacca--tgatttcctcagatccataattttctcaaagtttgttatat 32318821  T
Q  282 --ataaaaaatatatttttagttaagaaccata 312  Q
      | |||| ||||||||||| ||||||| ||||    
T  32318822 ccaaaaaatatatatttttaattaagaatcata 32318854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 28809877 - 28809988
Alignment:
Q  209 tttttgtatggtttataactaaatt-caccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 305  Q
    |||| |||| |||| |||||||||| |||||||  ||||||||||||| |||||||||||  | ||||||||||  ||||||||  ||||| ||||||||    
T  28809877 ttttggtattgtttttaactaaatttcaccatg--attttctcaaatccataattttctcaaaatttgttatatccaaaaaatatgtatttctagttaag 28809974  T
Q  306 aaccatacaaaaag 319  Q
    |||||||| |||||    
T  28809975 aaccataccaaaag 28809988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 52587383 - 52587454
Alignment:
Q  248 ctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
    |||||||| |||||||||||  ||||||||||||  ||||| ||||| |||||||||||||||||| |||||    
T  52587383 ctcaaatccataattttctcaaagtttgttatatcaaaaaattatatatttagttaagaaccatacgaaaag 52587454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 52824347 - 52824269
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||| |||||||| |||||||||||  ||||| |||||| |||||||||  |||||||||||||||||||||| |||||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatctaaaaaatatgtatttttagttaagaaccatacgaaaag 52824269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 4895097 - 4895003
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    |||||||||| ||||||  |||| |||||||  |||||||||||  ||||||||||||  ||||||||  ||||||||||||||||| |||||||||    
T  4895097 taactaaatttaccatg--atttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaactatacaaaaa 4895003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 27434750 - 27434640
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaaga 306  Q
    |||| ||||||||  |||||||||| |||||   |||| |||||||  |||||||||||  ||||||||||||  | ||||||| |||||||||||||||    
T  27434750 ttttcgtatggttcttaactaaatttaccata--atttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaatgtatttttagttaaga 27434653  T
Q  307 accatacaaaaag 319  Q
    || ||||||||||    
T  27434652 actatacaaaaag 27434640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 55107691 - 55107561
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||||||||||||  | |||||||| ||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  55107691 aaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatttaccatg--atttcctcaaatgcataattttctcaaagtttgttatat 55107594  T
Q  282 ataaaaaatat--atttttagttaagaaccata 312  Q
      ||| |||||  ||||||||||||||||||||    
T  55107593 ccaaataatatgtatttttagttaagaaccata 55107561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 24969572 - 24969685
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat-----ataaaaaatatatttttagtta 303  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||     | ||||||| ||||||||||||    
T  24969572 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagtta 24969669  T
Q  304 agaaccatacaaaaag 319  Q
    ||||| |||| |||||    
T  24969670 agaactatacgaaaag 24969685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 15788535 - 15788589
Alignment:
Q  110 aaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtg 164  Q
    ||||||| ||||| |||||||||||||||| | |||||| |||||||||||||||    
T  15788535 aaaaatagcaatccacatggaacacacataaatgaaagatatatagtagaaagtg 15788589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 16995584 - 16995694
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa--atatatttttagttaag 305  Q
    ||||| ||||||||| ||| |||||||| ||||  ||||||||||| | || ||||| || ||||||||||||| ||||||  || |||| ||||||||     
T  16995584 tttttcgtatggtttttaattaaattcaacatg--attttctcaaacccatcattttttcagagtttgttatatctaaaaaagatgtattgttagttaaa 16995681  T
Q  306 aaccatacaaaaa 318  Q
    |||||||| ||||    
T  16995682 aaccatacgaaaa 16995694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 3422490 - 3422569
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatat-ataaaaa-atatatttttagttaagaaccatacaaaaa 318  Q
    ||||||||||||||| |||||||||||  ||||| || |||  |||||| |||||||||||||||| |||||||| ||||    
T  3422490 tgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaaccatacgaaaa 3422569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 4688278 - 4688388
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaag 305  Q
    |||| ||||||||  |||||||||||||  |||||||| |||||||  | |||||||||  ||||||||||||   | |||| || |||||||| |||||    
T  4688278 ttttcgtatggttcttaactaaattcac--tgtgatttcctcaaattcacaattttctcaaagtttgttatatccaaaaaaatatgtatttttaattaag 4688375  T
Q  306 aaccatacaaaaa 318  Q
    |||||||| ||||    
T  4688376 aaccatacgaaaa 4688388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 23481992 - 23482054
Alignment:
Q  251 aaatctataattttctctgagtttgttatatataaaaa--atatatttttagttaagaaccat 311  Q
    |||||||||||||||||  | |||||||||||||||||  || ||| ||||||||||||||||    
T  23481992 aaatctataattttctcaaaatttgttatatataaaaaagatgtatatttagttaagaaccat 23482054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 24294608 - 24294497
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 305  Q
    ||||| ||||||||  |||||||||||||||  | |||| |||||||   ||||||||||  ||||||||||||  ||||||||  |||||||| |||||    
T  24294608 tttttcgtatggttcttaactaaattcacca--taatttcctcaaattcgtaattttctcaaagtttgttatatcaaaaaaatatgtatttttaattaag 24294511  T
Q  306 aaccatacaaaaag 319  Q
    || ||||| |||||    
T  24294510 aatcatacgaaaag 24294497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 42020204 - 42020232
Alignment:
Q  292 tatttttagttaagaaccatacaaaaagt 320  Q
    |||||||||||||||||||||||||||||    
T  42020204 tatttttagttaagaaccatacaaaaagt 42020232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 12838218 - 12838107
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaag 305  Q
    ||||| ||||||||| |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  |||||||||  |||||||||||||    
T  12838218 tttttcgtatggtttttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaag 12838121  T
Q  306 aaccatacaaaaag 319  Q
    ||||||||||||||    
T  12838120 aaccatacaaaaag 12838107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 3970495 - 3970633
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||||||||||||| |||||||  |  |||| ||||||||  |||||||||||||||  |||||| || ||||| |||||||||||  ||||||||||||    
T  3970495 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcacca--tgatttccttaaatccataattttctcaaagtttgttatat 3970592  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaagt 320  Q
      ||||||||  |||||||||||||||||||||| ||||||    
T  3970593 ccaaaaaatatgtatttttagttaagaaccatacgaaaagt 3970633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 26906621 - 26906484
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  26906621 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 26906524  T
Q  282 ataaaaaatatat--ttttagttaagaaccatacaaaaag 319  Q
      |||||||||||  ||||||||||||||||||| |||||    
T  26906523 ccaaaaaatatatatttttagttaagaaccatacgaaaag 26906484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 36278760 - 36278897
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  36278760 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 36278857  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  36278858 ccaaaaaatatatatttttagttaagaaccatacgaaaag 36278897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 13078167 - 13078305
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||||||||||||| |||||||  |  |||| ||||||||  |||||||||||||||  |||||| || ||||| |||||||||||  ||||||||||||    
T  13078167 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcacca--tgatttccttaaatccataattttctcaaagtttgttatat 13078264  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaagt 320  Q
      ||||||||  |||||||||||||||| ||||| ||||||    
T  13078265 ccaaaaaatatgtatttttagttaagaatcatacgaaaagt 13078305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 21969161 - 21969298
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  ||||||||||||    
T  21969161 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatat 21969258  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||||||||| |||||    
T  21969259 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 21969298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 21991597 - 21991734
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  ||||||||||||    
T  21991597 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatat 21991694  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||||||||| |||||    
T  21991695 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 21991734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 32237398 - 32237535
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  | ||||| ||||||||  |||||||||| ||||||  ||||||||| ||| |||||||||||  ||||||||||||    
T  32237398 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatttaccatg--attttctcagatccataattttctcaaagtttgttatat 32237495  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||| ||||||||||||| |||||    
T  32237496 ccaaaaaatatgtatttttaattaagaaccatacgaaaag 32237535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 35368900 - 35368803
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || || ||||| | ||||| ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||||    
T  35368900 aaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcacca--tgattttctcaaatccataattttctcaaagtttgttatat 35368803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 22176276 - 22176138
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||| |  |||||||||||||  |||||||||||||  | |||||| |||||||| |||||||||||  ||||||| ||||    
T  22176276 aaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaattcac--tatgatttcctcaaatccataattttctcaaagtttgtaatat 22176179  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
       | |||| || |||||||||||||||||||||| |||||    
T  22176178 ccaacaaaatatgtatttttagttaagaaccatacgaaaag 22176138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 45487966 - 45487829
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||  |||||||||||   |||||||||||    
T  45487966 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaattcataattttctcaatgtttgttatat 45487869  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  45487868 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 45487829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 25446390 - 25446279
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaag 305  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||   | |||| || ||||||||||||||    
T  25446390 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 25446293  T
Q  306 aaccatacaaaaag 319  Q
    |||||||| |||||    
T  25446292 aaccatacgaaaag 25446279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 22101332 - 22101194
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||||||||    |||| ||||||||  ||||||||||||| |||  |||| |||||||| |||||||||||  ||||||||||||    
T  22101332 aaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaattcactatg--atttcctcaaatccataattttctcaaagtttgttatat 22101235  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
       | |||| || |||||||||||||||||||||| |||||    
T  22101234 ccaacaaaatatgtatttttagttaagaaccatacgaaaag 22101194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 25488387 - 25488482
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  ||||  ||| ||| |||||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||    
T  25488387 taactaaattcaccatg--atttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaag 25488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 25561136 - 25561041
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  ||||  ||| ||| |||||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||    
T  25561136 taactaaattcaccatg--atttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaag 25561041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 42105420 - 42105523
Alignment:
Q  215 tatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa--tatatttttagttaagaaccata 312  Q
    |||||||  ||||||||||||||  |||||||||| ||||| |||||| ||||  |||||||||| | |||||||  | |||||||||||||||||||||    
T  42105420 tatggttcttaactaaattcacc--gtgattttcttaaatccataattctctcaaagtttgttatctctaaaaaaattgtatttttagttaagaaccata 42105517  T
Q  313 caaaaa 318  Q
    ||||||    
T  42105518 caaaaa 42105523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 12789746 - 12789637
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||||||||||||  ||| |||||||||||||  |||| |||||||  |||||||| ||  ||||||||||||  |||||||||  ||||||||||||||    
T  12789746 tttttgtatggttcttaattaaattcaccatg--atttcctcaaattcataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaaga 12789649  T
Q  307 accatacaaaaa 318  Q
    ||||||| ||||    
T  12789648 accatacgaaaa 12789637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 36657494 - 36657574
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  36657494 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaag 36657574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 44611412 - 44611521
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    ||||||||| |||  |||||||||||||||||  ||||  ||||||  |||||||||||  ||||||||||||  |||||||||  |||||||||||| |    
T  44611412 tttttgtatagttcttaactaaattcaccatg--atttcttcaaattcataattttctcaaagtttgttatatcaaaaaaatatatatttttagttaaaa 44611509  T
Q  307 accatacaaaaa 318  Q
    ||||||||||||    
T  44611510 accatacaaaaa 44611521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 55340297 - 55340428
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || || ||||| | ||||| ||||| ||  |||||| ||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  55340297 aaaatttaggtacaatttcttatgtgtttttcgtatgattcttaactatattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 55340394  T
Q  282 ---ataaaaaatatatttttagttaagaaccata 312  Q
       | |||| || |||||||||||||||||||||    
T  55340395 ccaaaaaaatatgtatttttagttaagaaccata 55340428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 4072304 - 4072414
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 305  Q
    |||| ||||||||  |||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  4072304 ttttcgtatggttcttaactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 4072401  T
Q  306 aaccatacaaaaa 318  Q
    |||||||| ||||    
T  4072402 aaccatacgaaaa 4072414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 10017224 - 10017151
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccata 312  Q
    ||||||||||||||| |||||||| ||  ||||||||||||  ||||||||  |||||||||||||||||||||    
T  10017224 tgattttctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccata 10017151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 36329248 - 36329321
Alignment:
Q  248 ctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  36329248 ctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaag 36329321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 38125242 - 38125319
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    ||||||| ||||| ||||||||||   ||||||||||||| ||||||||  |||||||||||||||||||||| ||||    
T  38125242 attttcttaaatccataattttcttaaagtttgttatatacaaaaaatatgtatttttagttaagaaccatacgaaaa 38125319  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 10254709 - 10254605
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaag 305  Q
    |||| ||||||||  |||||||||||| ||||  ||||||||||||| |||||||| ||  ||||||||||||   | |||| || ||||||||||||||    
T  10254709 ttttcgtatggttcttaactaaattcatcatg--attttctcaaatccataattttttcaaagtttgttatatccaaaaaaatatgtatttttagttaag 10254612  T
Q  306 aaccata 312  Q
    |||||||    
T  10254611 aaccata 10254605  T

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Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 10441319 - 10441399
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||| ||| |||||    
T  10441319 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccgtaccaaaag 10441399  T

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Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 36822821 - 36822901
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||| ||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  36822821 tgatttcctcagatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaag 36822901  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 8831881 - 8831770
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaag 305  Q
    |||| ||||||||  |||||||||||||||||  ||||  ||||||| |||||||||||  ||||||||||||   | |||| || ||||||||||| ||    
T  8831881 ttttcgtatggttcttaactaaattcaccatg--atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagtttag 8831784  T
Q  306 aaccatacaaaaag 319  Q
    |||||||| |||||    
T  8831783 aaccatacgaaaag 8831770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 44920707 - 44920786
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    |||||||||||||| ||||||||||||  ||||| ||||||  ||||||||  ||||||||||||||||| ||| |||||    
T  44920707 tgattttctcaaatttataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaactataaaaaaa 44920786  T

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Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 404180 - 404074
Alignment:
Q  214 gtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaagaacca 310  Q
    ||||||||  |||||||||||||||||  |||| ||||| ||||||||||||||  ||||||||||||   | |||| || ||||||||||||| || ||    
T  404180 gtatggttcttaactaaattcaccatg--atttcctcaagtctataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaaaaatca 404083  T
Q  311 tacaaaaag 319  Q
    ||| |||||    
T  404082 tacgaaaag 404074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 43150605 - 43150510
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||  ||||||||  ||||||||||||| |||||||| |||||    
T  43150605 taactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaag 43150510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 45712949 - 45713044
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  |||| |||||| | |||||||| ||  ||||||||||||  ||||||||  ||||||||||| |||||||||| |||||    
T  45712949 taactaaattcaccatg--atttcctcaaagccataattttatcaaagtttgttatatccaaaaaatatgtatttttagtttagaaccatacgaaaag 45713044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 10117624 - 10117552
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaagaaccata 312  Q
    ||||||||||||| |||||||||||  ||||||||||||   | |||| || |||||||||||||||||||||    
T  10117624 attttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 10117552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 297600 - 297669
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaaccata 312  Q
    ||||||| ||||| |||||||||||  ||||||||||||  ||||| ||| |||||||||||||| ||||    
T  297600 attttctgaaatccataattttctcatagtttgttatattcaaaaattatgtttttagttaagaatcata 297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 43639127 - 43639223
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaag 319  Q
    |||| ||||||||||||  ||||  ||||||| |||||||||||  ||||||||||||  ||||||   |||||||||||||||||| ||||| |||||    
T  43639127 taaccaaattcaccatg--atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaatcatacgaaaag 43639223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 46222058 - 46222124
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgt 276  Q
    ||||| ||||||||| |||||||||||||||  ||||||||| ||||  |||||||||||| |||||||    
T  46222058 tttttcgtatggtttttaactaaattcacca--tgattttcttaaattcataattttctcttagtttgt 46222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 50099601 - 50099462
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||  | |||| |||||||  |||||||||||  ||||||||||||    
T  50099601 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcacca--taatttcctcaaattcataattttctcaaagtttgttatat 50099504  T
Q  282 --ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      | ||||||||  |||||||| |||| |||||||| |||||    
T  50099503 ccaaaaaaaatatgtatttttaattaaaaaccatacgaaaag 50099462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 20097556 - 20097506
Alignment:
Q  109 caaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaa 160  Q
    |||||||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  20097556 caaaaataacaatccacatgaaacacacatata-gaaagaattatagtagaa 20097506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 26976903 - 26976982
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatat-ataaaaa-atatatttttagttaagaaccatacaaaaa 318  Q
    ||||||||||||||| |||||||||||  ||||| || |||  |||||| |||||||||||||||| |||||||| ||||    
T  26976903 tgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaaccatacgaaaa 26976982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 1476555 - 1476685
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||   | ||||||||||||||  |||| || ||||| |||||| ||||  |||||||||| |    
T  1476555 aaaacttaggtacaattccttaggtgcttttggtatggttctaacctaaattcaccatg--atttccttaaatccataattctctcaaagtttgttatct 1476652  T
Q  282 ataaaaaa--tatatttttagttaagaaccata 312  Q
     |||||||  | |||||||||||||||||||||    
T  1476653 ctaaaaaaattgtatttttagttaagaaccata 1476685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 39850405 - 39850486
Alignment:
Q  241 tgattttctcaaatctataattttctctga-gtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  | |||||||||||  |||||||||  ||||||||||||||| ||||| |||||    
T  39850405 tgatttcctcaaatccataattttctcacaagtttgttatatccaaaaaatatatatttttagttaagaatcatacgaaaag 39850486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 46664284 - 46664207
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    |||| |||||||  |||||||||||  ||||||||||||  ||||||||  ||||||||||||||||| |||| ||||    
T  46664284 atttcctcaaattcataattttctcaaagtttgttatattaaaaaaatatgtatttttagttaagaactatacgaaaa 46664207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 157031 - 157110
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatatataaaaa---atatatttttagttaagaaccatacaaaaag 319  Q
    |||| |||||||| |||||||||||  ||||||||||||| |||||   || ||||||||| ||||||| |||| |||||    
T  157031 atttcctcaaatccataattttctcaaagtttgttatataaaaaaaaatatgtatttttagctaagaactataccaaaag 157110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 5529992 - 5529921
Alignment:
Q  251 aaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  |||||| |||||  ||||||   | |||||||||||||||||||||| |||||    
T  5529992 aaatctataattttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaaccatacgaaaag 5529921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 37506131 - 37506258
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||||||| |||||  ||||||  | |||||| |||||||  |||||||||| ||    ||||||||| ||||  |||||||||||  |||||||||| |    
T  37506131 aaaacttaagtgcaactccttaagtgttttttctatggttcttaactaaatttaca---tgattttcttaaattcataattttctcaaagtttgttatct 37506227  T
Q  282 --ataaaaaatatatttttagttaagaacca 310  Q
      | ||||||| |||||||||||||||||||    
T  37506228 ccaaaaaaaatgtatttttagttaagaacca 37506258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 46001 - 45864
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  ||||  |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  46001 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 45904  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  ||||||||||||||||||||||||||||    
T  45903 ccaaaaaatatgtatttttagttaagaaccatacaaaaag 45864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 12850546 - 12850683
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || |||||||  || |||||||||||||| |||||||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  12850546 aaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatat 12850643  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||||||||| |||||    
T  12850644 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 12850683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 9933606 - 9933710
Alignment:
Q  215 tatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccata 312  Q
    |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||| |||||| |||||||||  |||||||||||||||||||||    
T  9933606 tatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttattatatctaaaaaatatgtatttttagttaagaaccata 9933703  T
Q  313 caaaaag 319  Q
    | |||||    
T  9933704 cgaaaag 9933710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 45408792 - 45408656
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  ||| |||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  45408792 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatat 45408695  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  |||||||||||||||||||||||||||    
T  45408694 ccaaaaaatatgtatttttagttaagaaccatacaaaaa 45408656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 3117016 - 3116906
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  ||||||||||||  |||  ||||||||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  3117016 ttttcgtatggttcttaactaaattcattatg--attttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 3116919  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  3116918 accatacgaaaag 3116906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 16705873 - 16705763
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||| ||||||||| ||||||||||||| |||  ||||||||||| | |||||||| ||  ||||||||||||  |||||||||  ||||||||||||||    
T  16705873 ttttcgtatggtttttaactaaattcactatg--attttctcaaagccataattttatcaaagtttgttatatccaaaaaatatgtatttttagttaaga 16705776  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  16705775 accatacgaaaag 16705763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 2818833 - 2818696
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || ||| |||  | ||||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  |||||| |||||    
T  2818833 aaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgatatat 2818736  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||| ||||| |||||    
T  2818735 ccaaaaaatatgtatttttagttaagaatcatacgaaaag 2818696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 24101836 - 24101973
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||  ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  24101836 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatataccatg--atttcctcaaatccataattttctcaaagtttgttatat 24101933  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||||||||| |||||    
T  24101934 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 24101973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 9281351 - 9281488
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||| ||| || |||||||  || ||||  |||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  9281351 aaaactttggtacaattccttaggtacttttcatatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 9281448  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  9281449 ccaaaaaatatatatttttagttaagaaccatacgaaaag 9281488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 34456052 - 34455915
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || || ||||| | ||||| ||||||||  ||| |||||||| |||   |||| ||||||||||||||||||||  ||||||||||||    
T  34456052 aaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcata--atttcctcaaatctataattttctcaaagtttgttatat 34455955  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||| ||||||||||||| |||||    
T  34455954 ccaaaaaatatgtatttttaattaagaaccatacgaaaag 34455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 23836017 - 23835906
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaag 305  Q
    |||| ||||||||| |||| ||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||   | |||| || ||||||||||||||    
T  23836017 ttttcgtatggtttttaacaaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 23835920  T
Q  306 aaccatacaaaaag 319  Q
    |||||||| |||||    
T  23835919 aaccatacgaaaag 23835906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 1924011 - 1924121
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 305  Q
    |||| ||||||||  |||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  1924011 ttttcgtatggttcttaactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 1924108  T
Q  306 aaccatacaaaaa 318  Q
    |||||||| ||||    
T  1924109 aaccatacgaaaa 1924121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 9850789 - 9850897
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa-atatatttttagttaagaa 307  Q
    |||| ||||||||  |||||||||| ||||||  ||||||| ||||| |||||||||||  | ||||||||||  ||||| || ||||||||||||||||    
T  9850789 ttttcgtatggttcttaactaaatttaccatg--attttcttaaatccataattttctcaaaatttgttatatcaaaaaatatgtatttttagttaagaa 9850886  T
Q  308 ccatacaaaaa 318  Q
    |||||| ||||    
T  9850887 ccatacgaaaa 9850897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 27867553 - 27867607
Alignment:
Q  110 aaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtg 164  Q
    ||||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  27867553 aaaaatagcaatccacatggaacacacatatatgaaagaactatagtagaaagtg 27867607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 27920712 - 27920602
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||| ||  ||||||||||||  ||||||||  || ||||||||||||    
T  27920712 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtagttttagttaaga 27920615  T
Q  307 accatacaaaaag 319  Q
     |||||| |||||    
T  27920614 cccatacgaaaag 27920602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 42713807 - 42713907
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaa 304  Q
    ||||| ||||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||| ||||||   | |||| || |||||||||||||    
T  42713807 tttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttattatatccaaaaaaatatgtatttttagttaa 42713904  T
Q  305 gaa 307  Q
    |||    
T  42713905 gaa 42713907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 34490566 - 34490487
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    |||||| |||| ||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| ||||    
T  34490566 tgatttcctcagatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 34490487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 319
Target Start/End: Complemental strand, 20892987 - 20892914
Alignment:
Q  249 tcaaatctataattttctctgagtttgttatat--ataaaaa-atatatttttagttaagaaccatacaaaaag 319  Q
    ||||||| |||||||||||  ||||||||||||  ||||||| || |||||||||||||||||||||| |||||    
T  20892987 tcaaatccataattttctcaaagtttgttatatccataaaaatatgtatttttagttaagaaccatacgaaaag 20892914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 40362623 - 40362553
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||| ||||||||  |||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||||    
T  40362623 tttttcgtatggttcttaactaaattcacca--tgattttctcaaatc-ataattttctcatagtttgttatat 40362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 22269832 - 22269753
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  ||||||||||||| || ||||| ||||    
T  22269832 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaatcatacgaaaa 22269753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 7737232 - 7737094
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||| ||  |||||||||| ||||||  |||| |||||| | |||||||||||  ||||||||||||    
T  7737232 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatttaccatg--atttcctcaaagccataattttctcaaagtttgttatat 7737135  T
Q  282 ---ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
       | |||| || |||||||||||||||| ||||| |||||    
T  7737134 ccaaaaaaatatgtatttttagttaagaatcataccaaaag 7737094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 29229424 - 29229506
Alignment:
Q  241 tgattttctcaaatctataattttctctga-gtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagt 320  Q
    |||||| |||||||| |||||||||||  | |||| ||||||  |||||||||  ||||||||||||||||||||| ||||||    
T  29229424 tgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaagt 29229506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 29342724 - 29342806
Alignment:
Q  241 tgattttctcaaatctataattttctctga-gtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagt 320  Q
    |||||| |||||||| |||||||||||  | |||| ||||||  |||||||||  ||||||||||||||||||||| ||||||    
T  29342724 tgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaagt 29342806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 43476087 - 43475975
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat----ataaaaaatatatttttagtta 303  Q
    ||||| ||||||||  |||||||||||||||  |||||| |||||||  |||||||||||  ||||| ||||||    | |||| ||||||||||||||     
T  43476087 tttttcgtatggttcttaactaaattcacca--tgatttcctcaaattcataattttctcaaagtttattatatccaaaaaaaatatatatttttagttt 43475990  T
Q  304 agaaccatacaaaaa 318  Q
    | |||||||| ||||    
T  43475989 aaaaccatacgaaaa 43475975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 318
Target Start/End: Complemental strand, 37341025 - 37340997
Alignment:
Q  290 tatatttttagttaagaaccatacaaaaa 318  Q
    |||||||||||||||||||||||||||||    
T  37341025 tatatttttagttaagaaccatacaaaaa 37340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 885510 - 885415
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||  ||||||||||||  ||||||||  ||||||||||||||||||||||||||||    
T  885510 taactaaattcatcatg--attttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaag 885415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 15546799 - 15546663
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  ||| |||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  15546799 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatat 15546702  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  |||||||||||||||||||||||||||    
T  15546701 ccaaaaaatatgtatttttagttaagaaccatacaaaaa 15546663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 8091202 - 8091092
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  ||||||||||||||  ||||||| || ||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  8091202 ttttcgtatggttcttaactaaattcacc--gtgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 8091105  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  8091104 accatacgaaaag 8091092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 21379945 - 21380082
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||  |||||||||||   |||||||||||    
T  21379945 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaattcataattttctcaatgtttgttatat 21380042  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
      |||||||||  ||||||||||||||||||||| |||||    
T  21380043 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 21380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 3369110 - 3369015
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| |||||    
T  3369110 taactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaaccatacgaaaag 3369015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 4239020 - 4238882
Alignment:
Q  183 aaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat- 281  Q
    |||||||||| || |||||| | |  |||||||||||||  ||| |||||||||||||  |||||||||||||  ||||||||||  ||||||||||||     
T  4239020 aaacttaggtacaattccttctgtgctttttgtatggttcttaattaaattcaccatg--attttctcaaatccttaattttctcaaagtttgttatatc 4238923  T
Q  282 -ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
     | ||||||||  |||||||| || ||||||||||||||||    
T  4238922 caaaaaaaatatgtatttttaattgagaaccatacaaaaag 4238882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 13439837 - 13439724
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaa 304  Q
    ||||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||   | |||| || ||||||||| |||    
T  13439837 tttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagctaa 13439740  T
Q  305 gaaccatacaaaaagt 320  Q
    ||||||||| ||||||    
T  13439739 gaaccatacgaaaagt 13439724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 11687204 - 11687284
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  11687204 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaag 11687284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 29609168 - 29609031
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||||||| || || ||||||| ||  |||| ||||||||| ||||||||||||||  ||||||| || ||||| |||||||||||  |||||||||| |    
T  29609168 aaaacttacgtacaattccttagatgcttttcgtatggtttttaactaaattcacc--gtgatttccttaaatccataattttctcaaagtttgttatct 29609071  T
Q  282 --ataaaaaatatatttttagttaagaaccatacaaaaag 319  Q
      | |||| || ||||||||||||||||||| || |||||    
T  29609070 ccaaaaaagatgtatttttagttaagaaccacacgaaaag 29609031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 14393704 - 14393591
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa-----atatatttttagtta 303  Q
    |||||||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  |||||     || ||||||||||||    
T  14393704 tttttgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaagaaatatgtatttttagtta 14393607  T
Q  304 agaaccatacaaaaag 319  Q
    |||| ||||| |||||    
T  14393606 agaatcatacgaaaag 14393591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 31764355 - 31764467
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 305  Q
    ||||||||||||||  |||||||||||||||  | ||||||||||||  |||||||||||  |||||||| |||  ||||||||  ||| ||||||||||    
T  31764355 ttttttgtatggttcttaactaaattcacca--ttattttctcaaattcataattttctcaaagtttgttgtatccaaaaaatatgtatctttagttaag 31764452  T
Q  306 aaccatacaaaaagt 320  Q
    ||| |||| ||||||    
T  31764453 aactatacgaaaagt 31764467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 13172578 - 13172713
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||  || || ||||| ||||||||  ||||||||||||   | | |||| |||||||| |||||||||||  ||||||||||||    
T  13172578 aaaacttaggtacaattctctagatgtttttcgtatggttcttaactaaattca---tatcatttcctcaaatccataattttctcaaagtttgttatat 13172674  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  |||||||| ||||||||||||| ||||    
T  13172675 ccaaaaaatatgtatttttacttaagaaccatacgaaaa 13172713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 7808719 - 7808648
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaacca 310  Q
    |||||| ||||||||||||||||||||  ||||||||||||  ||||||||  ||||||||||||| |||||    
T  7808719 tgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaacca 7808648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 18998162 - 18998258
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat-ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  |||| ||| |||| |||||||||||  |||||||||||| | ||||||||  |||||||| ||||||||||||| |||||    
T  18998162 taactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaagaaccatacgaaaag 18998258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 20501808 - 20501737
Alignment:
Q  249 tcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
    ||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| ||||    
T  20501808 tcaaatccataattttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 20501737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 4890484 - 4890622
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || || ||||  | ||||| ||||||||  |||||||||| ||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  4890484 aaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatg--atttcctcaaattcataattttctcaaagtttgttatat 4890581  T
Q  282 -ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
       |||||||||   |||||||||||||||||||| |||||    
T  4890582 ccaaaaaaatatgcgtttttagttaagaaccatacgaaaag 4890622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 30905117 - 30905039
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa 288  Q
    |||||| |||||||| |||||||||||| |  ||||| | ||||||||||||||||||||  ||||| ||||||| |||||    
T  30905117 ttttttctatggtttttaactaaattcatc--gtgatctactcaaatctataattttctcaaagttttttatataaaaaaa 30905039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 17426659 - 17426771
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatat--atttttagttaa 304  Q
    |||| ||||||||  |||||||||||||||||  |||| ||||||||||||||||||||  ||||||||||||  | |||||||||  ||||||||||||    
T  17426659 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatctataattttctcaaagtttgttatatccaaaaaaaatatacatttttagttaa 17426756  T
Q  305 gaaccatacaaaaag 319  Q
    ||||||||| |||||    
T  17426757 gaaccatacgaaaag 17426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 37114405 - 37114268
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || ||| ||| || ||||||||||||||  |||||||||||||||  ||||||||| ||||| |||||||||||  ||||| ||||||    
T  37114405 aaaatttaggtacaattctttagatgttttttgtatggttcttaactaaattcacca--tgattttcttaaatccataattttctcaaagtttattatat 37114308  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||| ||||||||||||| |||||    
T  37114307 ccaaaaaatatgtatttttaattaagaaccatacgaaaag 37114268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 38520185 - 38520048
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||| ||| |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  38520185 aaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatat 38520088  T
Q  282 ataaaaaatatat--ttttagttaagaaccatacaaaaag 319  Q
      |||||||||||  ||||||||||||||||||| |||||    
T  38520087 ccaaaaaatatatatttttagttaagaaccatacgaaaag 38520048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 38629641 - 38629504
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  | ||||| ||||||||  |||||||||||||||  |||||| |||||||  |||||||||||  ||||| ||||||    
T  38629641 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcacca--tgatttcctcaaattcataattttctcaaagtttattatat 38629544  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||||||||||||||||| |||||    
T  38629543 ccaaaaaatatgtatttttagttaagaaccatacgaaaag 38629504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 40891180 - 40891044
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  40891180 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 40891083  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  |||||||||||||||||| ||| ||||    
T  40891082 ccaaaaaatatgtatttttagttaagaaccgtacgaaaa 40891044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 15882368 - 15882230
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  ||||||||||||| ||||| |||||  |||| |||||||    
T  15882368 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataatattctcaaagttagttatat 15882271  T
Q  282 ataaaaaa---tatatttttagttaagaaccatacaaaaag 319  Q
      ||||||   | ||||||||||||||||||||||||||||    
T  15882270 ccaaaaaaatatgtatttttagttaagaaccatacaaaaag 15882230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 29780990 - 29781100
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||| |||||||||| |||||   |||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  29780990 ttttcgtatggtttttaactaaatttaccata--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 29781087  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  29781088 accatacgaaaag 29781100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 8210490 - 8210353
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||||||| || || ||||||| || ||||||||||| ||  |||| ||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||    
T  8210490 aaaacttaagtacaattccttagatgttttttgtatgattcttaaccaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatat 8210393  T
Q  282 ataaaaaat--atatttttagttaagaaccatacaaaaag 319  Q
      |||||||  |||| |||||||||||| ||||| |||||    
T  8210392 ccaaaaaatatatatatttagttaagaatcatacgaaaag 8210353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 12234634 - 12234496
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagttt-gttata 280  Q
    ||||||||||| || || |||| ||  |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||| ||||||    
T  12234634 aaaacttaggtacaatttcttagatgcttttcgtatggttattaactaaattcacgatg--atttcctcaaattcataattttctcaaagttttgttata 12234537  T
Q  281 tataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
    |  |||||||||  ||||||||||||||||||||| |||||    
T  12234536 tccaaaaaatatgtatttttagttaagaaccatacgaaaag 12234496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 38405280 - 38405167
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaa 304  Q
    ||||||||||||||  ||||||||||||  |||  ||||||| ||||   ||||||||||  ||||||||||||  ||||||   | |||||||||||||    
T  38405280 ttttttgtatggttcttaactaaattcataatg--attttcttaaattcgtaattttctcaaagtttgttatatccaaaaaaagatgtatttttagttaa 38405183  T
Q  305 gaaccatacaaaaagt 320  Q
    ||||||||||||||||    
T  38405182 gaaccatacaaaaagt 38405167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 23940850 - 23940946
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa---atatatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  |||| ||||||||  ||||||||||  |||||||||||| ||||||   || ||||||||||||| |||||||| |||||    
T  23940850 taactaaattcaccatg--atttcctcaaatccgtaattttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaaccatacgaaaag 23940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 24741827 - 24741963
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||  |||||| |||||||| || |||||||| |||||| ||||||    
T  24741827 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcacca--tgatttcctcaaatccatgattttctcagagtttattatat 24741924  T
Q  282 ataaaaaa--tatatttttagttaagaaccatacaaaaa 318  Q
      || | |  | |||||||||||||||||||||| ||||    
T  24741925 gcaacataggtgtatttttagttaagaaccatacgaaaa 24741963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 4262007 - 4262110
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  ||||||||||||| |||  |||| ||||| || |||||||||||  ||||||||||||  ||||||||  |||||||| ||||||    
T  4262007 ttttcgtatggttcttaactaaattcactatg--atttcctcaagtccataattttctcaaagtttgttatattcaaaaaatatgtatttttaattaaga 4262104  T
Q  307 accata 312  Q
    ||||||    
T  4262105 accata 4262110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 41510355 - 41510403
Alignment:
Q  113 aataacaatcgacatggaacacacatatacgaaagaaatatagtagaaa 161  Q
    |||||||||||||||| || |||| |||| |||||||||||||||||||    
T  41510355 aataacaatcgacatgaaatacacgtatatgaaagaaatatagtagaaa 41510403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 33100708 - 33100786
Alignment:
Q  243 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||| |||||||| |||||||||||  ||||||||||||  ||||||||  | |||||||||||||||| ||| |||||    
T  33100708 atttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtttttttagttaagaaccgtacgaaaag 33100786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 36898187 - 36898287
Alignment:
Q  215 tatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttata-tataaaaaata-----tatttttagttaagaac 308  Q
    |||||||| ||||||| |||||  |||||||||  ||||||||||||||| |  |||||||||||| || ||||||||     |||||||||||||||||    
T  36898187 tatggtttttaactaagttcac--tgtgattttagcaaatctataatttttttagagtttgttatattaaaaaaaatatattgtatttttagttaagaac 36898284  T
Q  309 cat 311  Q
    |||    
T  36898285 cat 36898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 24211309 - 24211419
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  ||| ||||||||||  || |||| || || || |||||||||||  |||||||||||| |||||||||  ||||| || ||||||    
T  24211309 ttttcgtatggttcttaattaaattcacc--gtaatttccttaattccataattttctcatagtttgttatatctaaaaaatatgtatttctatttaaga 24211406  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  24211407 accatacgaaaag 24211419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 35467337 - 35467200
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgtta-ta 280  Q
    |||||||| || || |||||||| |  |||| ||||||||  |||||||||||| ||||  ||||  | ||||| ||||||||||   ||||||||| |     
T  35467337 aaaacttacgtacaattccttatgtgcttttcgtatggttcttaactaaattcatcatg--atttctttaaatccataattttcttaaagtttgttactc 35467240  T
Q  281 tataaaaaatatatttttagttaagaaccatacaaaaagt 320  Q
     | |||| || ||||||||||||||||||| |||||||||    
T  35467239 caaaaaagatgtatttttagttaagaaccacacaaaaagt 35467200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 1456053 - 1456157
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    ||||| ||||||| ||||||||||||||  ||| ||||||||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||| ||||    
T  1456053 tttttatatggttcataactaaattcac--tgtaattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagtcaaga 1456150  T
Q  307 accatac 313  Q
    |||||||    
T  1456151 accatac 1456157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 12744993 - 12744857
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  | ||||| ||||| ||| | |||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  12744993 aaaacttaggtacaattccttaggtgtttttcgtatgatttttgactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatat 12744896  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  ||||||||||||| |||||||||||||    
T  12744895 ccaaaaaatatgtatttttagttaaaaaccatacaaaaa 12744857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 33629349 - 33629487
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||| |  |||| ||||||||  ||||||||||||| |||  ||||||||||||| |||||||||||  ||||||||||||    
T  33629349 aaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaattcactatg--attttctcaaatccataattttctcaaagtttgttatat 33629446  T
Q  282 ataaaaa----atatatttttagttaagaaccatacaaaaa 318  Q
      |||||    ||||||||||||||||||| ||||| ||||    
T  33629447 ccaaaaaatatatatatttttagttaagaatcatacgaaaa 33629487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 8364676 - 8364771
Alignment:
Q  224 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa--tatatttttagttaagaaccatacaaaaag 319  Q
    |||||||||||||||||  ||||||| |||| ||||||| ||||  |||||||||| | |||||||  ||||||||||||||||||||||||||||||    
T  8364676 taactaaattcaccatg--attttcttaaatttataattctctcaaagtttgttatgtctaaaaaaattatatttttagttaagaaccatacaaaaag 8364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 1138699 - 1138589
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||| ||||||||  ||||||||||||  |||  ||||||||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  1138699 ttttcgtatggttcttaactaaattcattatg--attttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 1138602  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  1138601 accatacgaaaag 1138589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 21262083 - 21261973
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||||||||||||  |||||||||||| ||||  |||| |||||||| | |||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  21262083 tttttgtatggttcttaactaaattcatcatg--atttcctcaaatccacaattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 21261986  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  21261985 accatacgaaaag 21261973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 35276322 - 35276434
Alignment:
Q  208 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaa 304  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||| ||||||||||   ||||| |||||| |||||||   | ||||||||| |||    
T  35276322 ttttttgtatggtttataactaaatttacca--tgattttatcaaatccataattttcttaaagtttattatatctaaaaaaatgtgtatttttaggtaa 35276419  T
Q  305 gaaccatacaaaaag 319  Q
    |||| ||||||||||    
T  35276420 gaactatacaaaaag 35276434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 13754295 - 13754431
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||| | ||||| ||||| ||  |||||||||||||||  | |||| |||||||  |||||||||||  |||||| |||||    
T  13754295 aaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaattcacca--taatttcctcaaattcataattttctcaaagtttgctatat 13754392  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  |||||||||||||||||||||| ||||    
T  13754393 caaaaaaatatgtatttttagttaagaaccatacgaaaa 13754431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 37655183 - 37655292
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||||||| ||||  |||||||||||||||||  | || |||||||  |||||||||||  ||||||||||| | |||||||||  ||||||||||||||    
T  37655183 tttttgtacggttcttaactaaattcaccatg--acttcctcaaattcataattttctcaaagtttgttata-acaaaaaatatgtatttttagttaaga 37655279  T
Q  307 accatacaaaaag 319  Q
    |||||||||||||    
T  37655280 accatacaaaaag 37655292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 15855953 - 15855873
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  15855953 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaag 15855873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 16473065 - 16472985
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  16473065 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaag 16472985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 20476598 - 20476461
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  | ||||||||||    
T  20476598 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaaatttgttatat 20476501  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaag 319  Q
       ||||||||  ||||||||||||||||||||| |||||    
T  20476500 cacaaaaatatgtatttttagttaagaaccatacgaaaag 20476461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 35420673 - 35420753
Alignment:
Q  241 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||||||||| |||||    
T  35420673 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaag 35420753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 4266149 - 4266013
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||| ||| || |||||||  | ||||| ||||||||  ||||||||||||||  |||||||  ||||||| ||||||||||   ||||||||| ||    
T  4266149 aaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaattcacc--gtgatttcttcaaatccataattttcttaaagtttgttacat 4266052  T
Q  282 ataaaaaatat--atttttagttaagaaccatacaaaaa 318  Q
      |||||||||  ||||||||||||||||||||| ||||    
T  4266051 ccaaaaaatatgtatttttagttaagaaccatacgaaaa 4266013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 12808078 - 12807942
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  | ||||| ||||| ||  | |||||||||||||||  |||| || ||||| |||||||| ||  ||||||||||||    
T  12808078 aaaacttaggtacaattccttaagtgtttttcgtatgattcttgactaaattcaccatg--atttccttaaatccataattttttcaaagtttgttatat 12807981  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
     |||||||||  ||||||||||||| |||||||| ||||    
T  12807980 ctaaaaaatatgtatttttagttaaaaaccatacgaaaa 12807942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 24397278 - 24397387
Alignment:
Q  210 ttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaaga 306  Q
    ||||||||||||  |||||||||||||    |||||| |||||||| |||||||||||  ||||||||||||   | |||| || |||||||||||||||    
T  24397278 ttttgtatggttcttaactaaattcaca---tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaaga 24397374  T
Q  307 accatacaaaaag 319  Q
    ||||||| |||||    
T  24397375 accatacgaaaag 24397387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 37552339 - 37552449
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||||||| ||||  |||||||||||||||||  | || |||||||  |||||||||||  |||||||||||   |||||||||  ||||||||| ||||    
T  37552339 tttttgtacggttcttaactaaattcaccatg--acttcctcaaattcataattttctcaaagtttgttataacaaaaaaatatgtatttttagtcaaga 37552436  T
Q  307 accatacaaaaag 319  Q
    |||||||||||||    
T  37552437 accatacaaaaag 37552449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 43539274 - 43539138
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    |||| |||||| || |||||||  | ||||| |||||||   |||||||||||| |  |||||||||| ||||| |||||||||||  ||||||||||||    
T  43539274 aaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatc--gtgattttcttaaatccataattttctcaaagtttgttatat 43539177  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaa 318  Q
      ||||||||  ||||| ||||| |||||||||| ||||    
T  43539176 ccaaaaaatatgtatttatagttcagaaccatacgaaaa 43539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 35807075 - 35806972
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 306  Q
    |||||||||||||   | ||||||||||||||  |||||||||||||| ||||||| |   ||||||||||||  |||||| ||  ||||||||||||||    
T  35807075 tttttgtatggttctaacctaaattcaccatg--attttctcaaatctttaatttttttaaagtttgttatattcaaaaaagatgtatttttagttaaga 35806978  T
Q  307 accata 312  Q
    ||||||    
T  35806977 accata 35806972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 21259780 - 21259864
Alignment:
Q  228 taaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccata 312  Q
    |||||||||||||  |||| ||||||   |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||    
T  21259780 taaattcaccatg--atttcctcaaaatcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccata 21259864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 10304824 - 10304773
Alignment:
Q  181 caaaacttaggtgcatttccttatatattttttgtatggtttataactaaat 232  Q
    ||||||||||||||| ||||||| || ||||||||||| ||| |||||||||    
T  10304824 caaaacttaggtgcaattccttagatgttttttgtatgatttttaactaaat 10304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 10132421 - 10132365
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcacca 238  Q
    ||||||||| | || |||||||| | ||||||||||||||  |||||||||||||||    
T  10132421 aaaacttagatacaattccttatgtgttttttgtatggttcttaactaaattcacca 10132365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 12191494 - 12191423
Alignment:
Q  249 tcaaatctataattttctctgagtttgttatatataaaaaatatat--ttttagttaagaaccatacaaaaa 318  Q
    ||||||||||| ||||||   ||||||||||||  ||||||||| |  ||||| ||||||||||||||||||    
T  12191494 tcaaatctatagttttcttaaagtttgttatatccaaaaaatatgtaattttatttaagaaccatacaaaaa 12191423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 1970 - 2081
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatat-aaaaaata--tatttttagttaag 305  Q
    |||||||||||||  |||||||||||||||||  |||| |||||||| ||||||||| |  |||||||||||| | ||||||||  ||||||||||||||    
T  1970 tttttgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttcacaaagtttgttatatctaaaaaaatacgtatttttagttaag 2067  T
Q  306 aaccatacaaaaag 319  Q
    ||||||| ||||||    
T  2068 aaccatataaaaag 2081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 48293 - 48156
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||| | || ||||||| ||  |||| |||| |||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  48293 aaaacttagatacaattccttagatgcttttcgtatagttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 48196  T
Q  282 ataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
      ||||||||  |||||||| |||| |||||||| |||||    
T  48195 ccaaaaaatatgtatttttaattaaaaaccatacgaaaag 48156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 3424 - 3535
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 306  Q
    |||||||||||||  ||| |||||||||||||  |||| ||||||| ||||||||| ||  ||||||||||||  ||||||||  |||||||| ||||||    
T  3424 tttttgtatggttcttaattaaattcaccatg--atttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaaga 3521  T
Q  307 accatacaaaaagt 320  Q
    ||||||| ||||||    
T  3522 accatacgaaaagt 3535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 10236 - 10152
Alignment:
Q  228 taaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa-atatatttttagttaagaaccatac 313  Q
    |||||||||||||  ||||||||| ||| |||||||||||  ||||||||||||  ||||| |||||||||||||||||||||||||    
T  10236 taaattcaccatg--attttctcacatccataattttctcaaagtttgttatatccaaaaatatatatttttagttaagaaccatac 10152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 51230 - 51093
Alignment:
Q  182 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 281  Q
    ||||||||||| || |||||||  || ||||  |||||||  ||||||||||||| |||  |||| || ||||  |||||||||||  ||||||||||||    
T  51230 aaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatg--atttccttaaattcataattttctcaaagtttgttatat 51133  T
Q  282 ataaaaaatatat--ttttagttaagaaccatacaaaaag 319  Q
      |||||||||||  ||||||||||||||||||| |||||    
T  51132 ccaaaaaatatatatttttagttaagaaccatacgaaaag 51093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 7226 - 7117
Alignment:
Q  209 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaaga 306  Q
    |||| ||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||  | || | ||||||||||||||||||    
T  7226 ttttcgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaatatatatatttttagttaaga 7129  T
Q  307 accatacaaaaa 318  Q
    | ||||| ||||    
T  7128 atcatacgaaaa 7117  T

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Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 57879 - 57827
Alignment:
Q  109 caaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaag 162  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  57879 caaaaataacattcgacatggaacacacatata-gaaagaattatagtagaaag 57827  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 72348 - 72412
Alignment:
Q  257 ataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaag 319  Q
    ||||||||||| |||||||||||||  ||||||||  ||||||||||||| |||||||| |||||    
T  72348 ataattttctcagagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaag 72412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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