View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19614_high_6 (Length: 251)
Name: NF19614_high_6
Description: NF19614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19614_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 35036407 - 35036197
Alignment:
| Q |
22 |
atgtcgatctaagaatatattatggcattaggtttattagaaatagagattgtaaaaggttgtttatagaaaggataaataaaatgaaaacgccatgaac |
121 |
Q |
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| T |
35036407 |
atgtcgatctaagaatatattatggcattaggtttattagaaatagagattgtaaaaggttgtttatagaaaggataaataaaatgaaaacgccatgaac |
35036308 |
T |
|
| Q |
122 |
atgtatcttggaattcattgtatattatgtcttatgagagtcgaatcatgttttcattgcacacttgcatttatataggaataaattgtaatgtcctctc |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35036307 |
atgtatcttggaattcattgtatattatgtcttatgagagtcgaatcatgttttcattgcacacttgcatttatataggaataaattgtaatgtcctctc |
35036208 |
T |
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| Q |
222 |
tagaggatagt |
232 |
Q |
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||||||||||| |
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| T |
35036207 |
tagaggatagt |
35036197 |
T |
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