View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19614_low_6 (Length: 295)
Name: NF19614_low_6
Description: NF19614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19614_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 9 - 276
Target Start/End: Original strand, 15288223 - 15288490
Alignment:
| Q |
9 |
ggtagattatactcacttggcttccatctccaataaagataacctaaatcaggtctaccatttgtgatgcatctctcactctctttgattgtgccacatg |
108 |
Q |
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| T |
15288223 |
ggtagattacactcacttggcttccatctccaataaagataacctaaatcaggtctaccatttgtgatgcatctctcactttctttgattgtaccacatg |
15288322 |
T |
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| Q |
109 |
tggtgacattgtatatagggcctctcatgtcactaacccaatctccatttgaatagtcacatgatttctcatgatcataaaccttgttcttccctacaaa |
208 |
Q |
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| T |
15288323 |
tggtgacattgtataaagggcctctcatgtcactaacccaatctccatttgaatagtcacatgatttctcatgatcataaaccttgttcttccctacaaa |
15288422 |
T |
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| Q |
209 |
aaatatattacataaaaattagtaaactaagaagtccttaattagtataacaaattgctagttagagt |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15288423 |
aaatatattacataaaaattagtaaactaagaagtccttaattagtataacaaattgctagttagagt |
15288490 |
T |
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