View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19615_high_34 (Length: 417)
Name: NF19615_high_34
Description: NF19615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19615_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 9 - 398
Target Start/End: Original strand, 35254128 - 35254517
Alignment:
| Q |
9 |
gattatactaatagcatgttaatattttgtttatttttatgaaaaattgatgcaggaactgatgaaaagaaggccaaggaacttggaccaattatagata |
108 |
Q |
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| T |
35254128 |
gattatactaatagcatgttaatattttgtttatttttatgaaaaattgatgcaggaactgatgaaaagaaggccaaggaacttggaccaattatagata |
35254227 |
T |
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| Q |
109 |
aattctatgaaaaagatataaaaaatgcttcaagggacttcccagaattctaccgaggagtatgcgagatagtcgagtactaatcatttttcatattaaa |
208 |
Q |
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| T |
35254228 |
aattctatgaaaaagatataaaaaatgcttcaagggacttcccagaattctaccgaggagtatgcgagatagtcgagtactaatcatttttcatattaaa |
35254327 |
T |
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| Q |
209 |
aacttatttaacaaacatagataaagttcaatgattttatttatttatcacctaggaaactttttctcaattacaactattcatcattctatggcaggga |
308 |
Q |
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| T |
35254328 |
aacttatttaacaaacatagataaagttcaatgattttattcatttatcacctaggaaactttttctcaattacaacttttcatcattctatggcaggga |
35254427 |
T |
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| Q |
309 |
actaaataaaaagtttggatacactcagttcaaactccccggaacgaaggaacttgagaaggcatacaatgtatgtgcacatatgcttat |
398 |
Q |
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| T |
35254428 |
actaaataaaaagtttggatacactcagttcaaactccccggaacgaaggaacttgagaaggcatacaatgtatgtgcacatatgcttat |
35254517 |
T |
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