View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19615_high_50 (Length: 365)

Name: NF19615_high_50
Description: NF19615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19615_high_50
NF19615_high_50
[»] chr2 (33 HSPs)
chr2 (55-348)||(20951870-20952153)
chr2 (261-348)||(20933429-20933518)
chr2 (23-60)||(2438489-2438526)
chr2 (23-60)||(22897655-22897692)
chr2 (23-59)||(2438222-2438258)
chr2 (23-59)||(17408031-17408067)
chr2 (23-59)||(34113790-34113826)
chr2 (23-62)||(45474345-45474384)
chr2 (23-57)||(7491843-7491877)
chr2 (23-57)||(8716896-8716930)
chr2 (23-57)||(27560205-27560239)
chr2 (23-56)||(7492108-7492141)
chr2 (23-56)||(11201683-11201716)
chr2 (23-56)||(16108215-16108248)
chr2 (23-56)||(17408298-17408331)
chr2 (23-56)||(20252210-20252243)
chr2 (23-60)||(23788965-23789002)
chr2 (23-56)||(34062669-34062702)
chr2 (23-56)||(34113531-34113564)
chr2 (23-56)||(34883852-34883885)
chr2 (23-56)||(36131032-36131065)
chr2 (23-56)||(36750888-36750921)
chr2 (23-56)||(37229440-37229473)
chr2 (23-56)||(39833739-39833772)
chr2 (23-56)||(40607702-40607735)
chr2 (23-56)||(40680727-40680760)
chr2 (23-56)||(41450516-41450549)
chr2 (23-64)||(44436825-44436866)
chr2 (23-63)||(2200244-2200284)
chr2 (29-65)||(10757988-10758024)
chr2 (185-213)||(20933333-20933361)
chr2 (24-56)||(22182929-22182961)
chr2 (23-59)||(42629368-42629404)
[»] chr1 (43 HSPs)
chr1 (23-59)||(44646268-44646304)
chr1 (23-56)||(35984402-35984435)
chr1 (23-60)||(39497697-39497734)
chr1 (23-59)||(943641-943677)
chr1 (23-63)||(11741390-11741430)
chr1 (23-59)||(15811236-15811272)
chr1 (23-59)||(30290262-30290298)
chr1 (23-59)||(39363198-39363234)
chr1 (23-59)||(44649626-44649662)
chr1 (23-63)||(47069052-47069092)
chr1 (23-59)||(49907018-49907054)
chr1 (23-58)||(44646535-44646570)
chr1 (23-58)||(44649893-44649928)
chr1 (23-62)||(45039676-45039715)
chr1 (23-61)||(37951953-37951991)
chr1 (23-61)||(42872338-42872376)
chr1 (23-56)||(1039385-1039418)
chr1 (23-56)||(1046291-1046324)
chr1 (23-56)||(1047992-1048025)
chr1 (23-56)||(4102718-4102751)
chr1 (23-56)||(8472049-8472082)
chr1 (23-56)||(9202245-9202278)
chr1 (23-56)||(15810972-15811005)
chr1 (23-56)||(21290122-21290155)
chr1 (23-56)||(23541979-23542012)
chr1 (23-56)||(23542243-23542276)
chr1 (23-56)||(36694854-36694887)
chr1 (23-56)||(36710955-36710988)
chr1 (23-56)||(38920239-38920272)
chr1 (23-56)||(39362934-39362967)
chr1 (23-56)||(39497433-39497466)
chr1 (23-56)||(39750121-39750154)
chr1 (23-56)||(41855477-41855510)
chr1 (23-56)||(45039412-45039445)
chr1 (23-56)||(46075871-46075904)
chr1 (23-56)||(52431178-52431211)
chr1 (24-64)||(2279945-2279985)
chr1 (23-59)||(21631111-21631147)
chr1 (23-55)||(30289866-30289898)
chr1 (23-59)||(36695119-36695155)
chr1 (23-59)||(36711220-36711256)
chr1 (23-63)||(37951682-37951722)
chr1 (24-56)||(52601991-52602023)
[»] chr3 (38 HSPs)
chr3 (23-62)||(46049990-46050029)
chr3 (23-64)||(20862461-20862502)
chr3 (23-56)||(22832611-22832644)
chr3 (23-60)||(26806382-26806419)
chr3 (23-59)||(9779976-9780012)
chr3 (23-59)||(36098963-36098999)
chr3 (23-62)||(7181344-7181383)
chr3 (23-58)||(10220931-10220966)
chr3 (23-58)||(14428608-14428643)
chr3 (23-58)||(21756484-21756519)
chr3 (24-59)||(50726522-50726557)
chr3 (24-59)||(50786291-50786326)
chr3 (23-57)||(4024051-4024085)
chr3 (23-57)||(26593769-26593803)
chr3 (23-57)||(52058984-52059018)
chr3 (23-56)||(4024315-4024348)
chr3 (23-56)||(9499501-9499534)
chr3 (23-56)||(12050396-12050429)
chr3 (23-56)||(14428873-14428906)
chr3 (23-56)||(16434977-16435010)
chr3 (23-56)||(20862196-20862229)
chr3 (23-56)||(22103933-22103966)
chr3 (23-56)||(25148459-25148492)
chr3 (23-56)||(25149126-25149159)
chr3 (23-56)||(26806115-26806148)
chr3 (23-56)||(31531415-31531448)
chr3 (23-56)||(33868712-33868745)
chr3 (23-56)||(35868087-35868120)
chr3 (23-56)||(36005768-36005801)
chr3 (23-56)||(37728713-37728746)
chr3 (23-56)||(43868103-43868136)
chr3 (23-56)||(44543782-44543815)
chr3 (23-56)||(45252773-45252806)
chr3 (23-56)||(49543677-49543710)
chr3 (23-56)||(50647684-50647717)
chr3 (23-56)||(51284066-51284099)
chr3 (23-56)||(53361594-53361627)
chr3 (23-63)||(50647948-50647988)
[»] chr7 (24 HSPs)
chr7 (23-61)||(39197713-39197751)
chr7 (23-59)||(28016549-28016585)
chr7 (23-63)||(32814426-32814466)
chr7 (23-59)||(38428411-38428447)
chr7 (23-58)||(26255094-26255129)
chr7 (23-62)||(39871617-39871656)
chr7 (23-58)||(40300228-40300263)
chr7 (23-56)||(19920563-19920596)
chr7 (23-56)||(20075111-20075144)
chr7 (23-56)||(21295151-21295184)
chr7 (23-56)||(26299316-26299349)
chr7 (23-56)||(28060981-28061014)
chr7 (23-56)||(29286041-29286074)
chr7 (23-56)||(32872379-32872412)
chr7 (23-56)||(33858870-33858903)
chr7 (23-56)||(36698135-36698168)
chr7 (23-56)||(38858298-38858331)
chr7 (23-56)||(41026100-41026133)
chr7 (23-64)||(41252093-41252134)
chr7 (23-56)||(41252365-41252398)
chr7 (23-60)||(44510347-44510384)
chr7 (23-56)||(48521029-48521062)
chr7 (23-63)||(17317435-17317474)
chr7 (23-59)||(31457994-31458030)
[»] chr8 (29 HSPs)
chr8 (23-56)||(5593421-5593454)
chr8 (23-59)||(1774339-1774375)
chr8 (23-59)||(8948355-8948391)
chr8 (23-59)||(28192179-28192215)
chr8 (23-58)||(2944276-2944311)
chr8 (23-57)||(51099-51133)
chr8 (23-61)||(34568485-34568523)
chr8 (23-57)||(39029177-39029211)
chr8 (23-56)||(8251937-8251970)
chr8 (23-56)||(8951432-8951465)
chr8 (23-56)||(11798869-11798902)
chr8 (23-56)||(13153928-13153961)
chr8 (23-56)||(13154192-13154225)
chr8 (23-56)||(17856780-17856813)
chr8 (23-56)||(18754144-18754177)
chr8 (23-56)||(26016569-26016602)
chr8 (23-56)||(28572046-28572079)
chr8 (23-56)||(28579639-28579672)
chr8 (23-56)||(29279460-29279493)
chr8 (23-56)||(32675761-32675794)
chr8 (23-56)||(40530410-40530443)
chr8 (23-56)||(42885054-42885087)
chr8 (23-56)||(43653943-43653976)
chr8 (23-56)||(44250859-44250892)
chr8 (23-59)||(16998993-16999029)
chr8 (24-56)||(18455720-18455752)
chr8 (23-63)||(44251125-44251165)
chr8 (23-59)||(44502617-44502653)
chr8 (23-59)||(45283796-45283832)
[»] chr6 (13 HSPs)
chr6 (23-64)||(11847836-11847877)
chr6 (24-64)||(12144043-12144083)
chr6 (23-57)||(231109-231143)
chr6 (24-58)||(1147272-1147306)
chr6 (23-57)||(34301836-34301870)
chr6 (23-56)||(4844400-4844433)
chr6 (23-56)||(8743188-8743221)
chr6 (23-56)||(9038642-9038675)
chr6 (23-56)||(9388529-9388562)
chr6 (23-56)||(15287402-15287435)
chr6 (23-56)||(23398143-23398176)
chr6 (23-56)||(30248647-30248680)
chr6 (23-56)||(34741730-34741763)
[»] chr5 (22 HSPs)
chr5 (23-60)||(1265945-1265982)
chr5 (23-59)||(10734527-10734563)
chr5 (23-57)||(7951561-7951595)
chr5 (23-61)||(19571943-19571981)
chr5 (23-56)||(186362-186395)
chr5 (23-56)||(3497540-3497573)
chr5 (23-56)||(3686758-3686791)
chr5 (23-64)||(4976294-4976335)
chr5 (23-56)||(6673232-6673265)
chr5 (23-56)||(9020694-9020727)
chr5 (23-56)||(9828393-9828426)
chr5 (23-56)||(9828657-9828690)
chr5 (23-56)||(14913648-14913681)
chr5 (23-56)||(16127259-16127292)
chr5 (23-56)||(16127523-16127556)
chr5 (23-56)||(16153259-16153292)
chr5 (23-56)||(22527692-22527725)
chr5 (23-56)||(26894877-26894910)
chr5 (23-56)||(34662204-34662237)
chr5 (23-56)||(40004413-40004446)
chr5 (24-56)||(16440931-16440963)
chr5 (23-59)||(23286478-23286514)
[»] chr4 (28 HSPs)
chr4 (23-60)||(30771524-30771561)
chr4 (23-59)||(4549626-4549662)
chr4 (23-59)||(47806857-47806893)
chr4 (23-59)||(52977979-52978015)
chr4 (24-60)||(53277190-53277226)
chr4 (23-58)||(35675924-35675959)
chr4 (23-57)||(5743663-5743697)
chr4 (23-57)||(29014063-29014097)
chr4 (23-57)||(34273223-34273257)
chr4 (23-56)||(4035825-4035858)
chr4 (23-56)||(4036089-4036122)
chr4 (23-56)||(5375561-5375594)
chr4 (23-56)||(9328244-9328277)
chr4 (23-64)||(17610024-17610065)
chr4 (23-56)||(20391441-20391474)
chr4 (23-56)||(20747434-20747467)
chr4 (23-56)||(26626006-26626039)
chr4 (23-56)||(32032997-32033030)
chr4 (23-56)||(33413518-33413551)
chr4 (23-56)||(44294789-44294822)
chr4 (23-56)||(45097169-45097202)
chr4 (23-56)||(45742810-45742843)
chr4 (23-64)||(47228732-47228773)
chr4 (23-56)||(55631999-55632032)
chr4 (23-59)||(25708682-25708718)
chr4 (23-59)||(30868805-30868841)
chr4 (23-59)||(53564360-53564396)
chr4 (23-59)||(55563131-55563167)
[»] scaffold0674 (1 HSPs)
scaffold0674 (23-61)||(5146-5184)
[»] scaffold0549 (1 HSPs)
scaffold0549 (23-61)||(10186-10224)
[»] scaffold0368 (1 HSPs)
scaffold0368 (23-61)||(8213-8251)
[»] scaffold0240 (1 HSPs)
scaffold0240 (23-61)||(18492-18530)
[»] scaffold0161 (1 HSPs)
scaffold0161 (23-61)||(3433-3471)
[»] scaffold0025 (1 HSPs)
scaffold0025 (23-57)||(65377-65411)
[»] scaffold0604 (1 HSPs)
scaffold0604 (23-56)||(3786-3819)
[»] scaffold0339 (1 HSPs)
scaffold0339 (23-64)||(7144-7185)
[»] scaffold0122 (1 HSPs)
scaffold0122 (23-56)||(12065-12098)
[»] scaffold0029 (1 HSPs)
scaffold0029 (23-56)||(51686-51719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (23-56)||(47640-47673)
[»] scaffold0008 (1 HSPs)
scaffold0008 (23-56)||(259126-259159)
[»] scaffold0002 (1 HSPs)
scaffold0002 (23-56)||(355335-355368)


Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 55 - 348
Target Start/End: Original strand, 20951870 - 20952153
Alignment:
Q  55 taataaataatagaatgcattttgagtatgtgactcaagagttgtaccctagtgtcgactcgtgaccgtagttacatgtgtgaaccctaaatttgaacaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20951870 taataaataatagaatgcattttgagtatgtgactcaagagttgtaccccagtgttgactcgtgaccgtagttacatgtgtgaaccctaaatttgaacaa 20951969  T
Q  155 atccttcagtgagtttaagagagtcccaccccatttttcggtaagaagatttttggttcctacttctcgttcatttcaattcctttcttannnnnnnnnn 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  20951970 atccttcagtgagtttaagagagtcccaccccatttttcggtaagaagatttttggttcctacttctcgttcatttcaattcctttctta---------t 20952060  T
Q  255 nnnnnncaaactaattaatgtttttgtttggtgtagtaatcacattcagaagattattgcgtctaattttcctggaacttctcaatcggtaact 348  Q
          |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20952061 ttttttcaaactaattaatgtttttgtttggtgtagcaatcacatt-agaagattattgcgtctaattttcctggaacttctcaatcggtaact 20952153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 20933429 - 20933518
Alignment:
Q  261 caaactaattaatgtttttgtttggtgtag---taatcacattcagaagattattgcgtctaattttcctggaacttctcaatcggtaact 348  Q
    |||| |||||||||||||||||||  ||||   ||| ||||||||||| |||||||| | | |||||||||||||| ||||||||||||||    
T  20933429 caaattaattaatgtttttgtttgtcgtaggcgtaa-cacattcagaatattattgcatattattttcctggaactactcaatcggtaact 20933518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 2438489 - 2438526
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagtaataa 2438526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 22897655 - 22897692
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagtaataa 22897692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 2438258 - 2438222
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  2438258 caaaagggtcttataattagggacggagggagtaata 2438222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 17408067 - 17408031
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  17408067 caaaagggtcttataattagggacggatggagtaata 17408031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 34113790 - 34113826
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  34113790 caaaagggtcttataattagggacggagggagtaata 34113826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 45474384 - 45474345
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaat 62  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  45474384 caaaagggtcttataattagggacggagggagtaacaaat 45474345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 7491877 - 7491843
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  7491877 caaaagggtcttataattagggacggagggagtaa 7491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 8716896 - 8716930
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  8716896 caaaagggtcttataattagggacggagggagtaa 8716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 27560239 - 27560205
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  27560239 caaaagggtcttataattagggacggagggagtaa 27560205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 7492108 - 7492141
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  7492108 caaaagggtcttataattagggacggagggagta 7492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 11201716 - 11201683
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  11201716 caaaagggtcttataattagggacggagggagta 11201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 16108248 - 16108215
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  16108248 caaaagggtcttataattagggacggagggagta 16108215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 17408298 - 17408331
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  17408298 caaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 20252243 - 20252210
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  20252243 caaaagggtcttataattagggacggagggagta 20252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 23789002 - 23788965
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  23789002 caaaagggtcttataattaaggacggagggagtaataa 23788965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 34062669 - 34062702
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  34062669 caaaagggtcttataattagggacggagggagta 34062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 34113564 - 34113531
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  34113564 caaaagggtcttataattagggacggatggagta 34113531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 34883852 - 34883885
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  34883852 caaaagggtcttataattagggacggagggagta 34883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 36131032 - 36131065
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  36131032 caaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 36750888 - 36750921
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  36750888 caaaagggtcttataattagggacggaagtagta 36750921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 37229473 - 37229440
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||| ||||||||||||||||||||||||||||    
T  37229473 caaaatggtcttataattagggacggaaggagta 37229440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 39833772 - 39833739
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  39833772 caaaagggtcttataattagggacggagggagta 39833739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 40607735 - 40607702
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  40607735 caaaagggtcttataattagggacggagggagta 40607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 40680760 - 40680727
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  40680760 caaaagggtcttataattagggacggatggagta 40680727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 41450549 - 41450516
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  41450549 caaaagggtcttataattagggacggagggagta 41450516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 44436825 - 44436866
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    |||||||||||||| |||||||||||| | ||||||||||||    
T  44436825 caaaagggtcttatcattagggacggaggtagtaataaataa 44436866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 2200244 - 2200284
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    ||||||||||||||||||||||||||| | |||| ||||||    
T  2200244 caaaagggtcttataattagggacggaggtagtagtaaata 2200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 10757988 - 10758024
Alignment:
Q  29 ggtcttataattagggacggaaggagtaataaataat 65  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  10757988 ggtcttataattagggacggagggagtaatcaataat 10758024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 20933333 - 20933361
Alignment:
Q  185 ccatttttcggtaagaagatttttggttc 213  Q
    |||||||||||||||||||||||||||||    
T  20933333 ccatttttcggtaagaagatttttggttc 20933361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 22182929 - 22182961
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagta 56  Q
    |||||||||||||||||||||||||| ||||||    
T  22182929 aaaagggtcttataattagggacggagggagta 22182961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 42629404 - 42629368
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  42629404 caaaagggtcttataattagggacggagggagcaata 42629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 44646304 - 44646268
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    |||||||||||||||||||||||||||||||||||||    
T  44646304 caaaagggtcttataattagggacggaaggagtaata 44646268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 35984435 - 35984402
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||||||||    
T  35984435 caaaagggtcttataattagggacggaaggagta 35984402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 39497697 - 39497734
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagtaataa 39497734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 943641 - 943677
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  943641 caaaagggtcttataattagggacggagggagtaata 943677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 11741430 - 11741390
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  11741430 caaaagggtcttataattagggacggagggagtattaaata 11741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 15811236 - 15811272
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  15811236 caaaagggtcttataattagggacggagggagtaata 15811272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 30290298 - 30290262
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  30290298 caaaagggtcttataattagggacggagggagtaata 30290262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 39363198 - 39363234
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  39363198 caaaagggtcttataattagggacggagggagtaata 39363234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 44649662 - 44649626
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  44649662 caaaagggtcttataattagggacggagggagtaata 44649626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 47069052 - 47069092
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  47069052 caaaagggtcttataattagggacggatggagtattaaata 47069092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 49907054 - 49907018
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  49907054 caaaagggtcttataattagggacggagggagtaata 49907018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 44646535 - 44646570
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  44646535 caaaagggtcttataattagggacggagggagtaat 44646570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 44649893 - 44649928
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  44649893 caaaagggtcttataattagggacggagggagtaat 44649928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 45039676 - 45039715
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaat 62  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  45039676 caaaagggtcttataattagggacggaggaagtaataaat 45039715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 37951953 - 37951991
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  37951953 caaaagggtcttataattagggacggagggagtattaaa 37951991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 42872338 - 42872376
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  42872338 caaaagggtcttacaattagggacggagggagtaataaa 42872376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 1039385 - 1039418
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  1039385 caaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 1046291 - 1046324
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  1046291 caaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 1048025 - 1047992
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  1048025 caaaagggtcttataattagggacggagggagta 1047992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 4102718 - 4102751
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  4102718 caaaagggtcttataattagggacggagggagta 4102751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 8472082 - 8472049
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  8472082 caaaagggtcttataattagggacggaagtagta 8472049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 9202278 - 9202245
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9202278 caaaagggtcttataattagggacggagggagta 9202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 15811005 - 15810972
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  15811005 caaaagggtcttataattagggacggatggagta 15810972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 21290155 - 21290122
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  21290155 caaaagggtcttataattagggacggaagtagta 21290122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 23542012 - 23541979
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  23542012 caaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 36694887 - 36694854
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  36694887 caaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 36710988 - 36710955
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  36710988 caaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 38920272 - 38920239
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  38920272 caaaagggtcttataattagggacggagggagta 38920239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 39362967 - 39362934
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  39362967 caaaagggtcttataattagggacggagggagta 39362934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 39497466 - 39497433
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  39497466 caaaagggtcttataattagggacggagggagta 39497433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 39750154 - 39750121
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  39750154 caaaagggtcttataattagggacggagggagta 39750121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 41855477 - 41855510
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  41855477 caaaagggtcttataattagggacggatggagta 41855510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 45039445 - 45039412
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  45039445 caaaagggtcttataattagggacggagggagta 45039412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 46075871 - 46075904
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  46075871 caaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 52431178 - 52431211
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  52431178 caaaagggtcttataattagggacggagggagta 52431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 2279985 - 2279945
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  2279985 aaaagggtcttataattagggacggaggaagtattaaataa 2279945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 21631111 - 21631147
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| | |||||||    
T  21631111 caaaagggtcttataattagggacggaggtagtaata 21631147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 30289866 - 30289898
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagt 55  Q
    ||||||||||||||||||||||||||| |||||    
T  30289866 caaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 36695119 - 36695155
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    |||||||||||||||||||||||| || |||||||||    
T  36695119 caaaagggtcttataattagggacagagggagtaata 36695155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 36711220 - 36711256
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    |||||||||||||||||||||||| || |||||||||    
T  36711220 caaaagggtcttataattagggacagagggagtaata 36711256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 37951722 - 37951682
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    |||||||||| |||||||||||||||| |||||||| ||||    
T  37951722 caaaagggtcatataattagggacggagggagtaattaata 37951682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 52602023 - 52601991
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagta 56  Q
    |||||||||||||||||||||||||| ||||||    
T  52602023 aaaagggtcttataattagggacggagggagta 52601991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 46049990 - 46050029
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaat 62  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  46049990 caaaagggtcttataattagggacggagggagtaataaat 46050029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 20862461 - 20862502
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  20862461 caaaagggtcttataattagggacggagggagtattaaataa 20862502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 22832611 - 22832644
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||||||||    
T  22832611 caaaagggtcttataattagggacggaaggagta 22832644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 26806382 - 26806419
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  26806382 caaaaggctcttataattagggacggaaggagtaataa 26806419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 9780012 - 9779976
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  9780012 caaaagggtcttataattagggacggagggagtaata 9779976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 36098999 - 36098963
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  36098999 caaaagggtcttataattagggacggatggagtaata 36098963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 7181383 - 7181344
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaat 62  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  7181383 caaaagggtcttataattagggacggagggagtattaaat 7181344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 10220966 - 10220931
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  10220966 caaaagggtcttataattagggacggagggagtaat 10220931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 14428643 - 14428608
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14428643 caaaagggtcttataattagggacggagggagtaat 14428608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 21756519 - 21756484
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  21756519 caaaagggtcttataattagggacggagggagtaat 21756484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 50726557 - 50726522
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||| ||||||||||||||||||||||||||    
T  50726557 aaaagggtcctataattagggacggaaggagtaata 50726522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 50786291 - 50786326
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||| ||||||||||||||||||||||||||    
T  50786291 aaaagggtcctataattagggacggaaggagtaata 50786326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 4024085 - 4024051
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  4024085 caaaagggtcttataattagggacggagggagtaa 4024051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 26593769 - 26593803
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  26593769 caaaagggtcttataattagggacggagggagtaa 26593803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 52059018 - 52058984
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  52059018 caaaagggtcttataattagggacggagggagtaa 52058984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 4024315 - 4024348
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  4024315 caaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 9499501 - 9499534
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9499501 caaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 12050396 - 12050429
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  12050396 caaaagggtcttataattagggacggagggagta 12050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 14428873 - 14428906
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  14428873 caaaagggtcttataattagggacggagggagta 14428906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 20862229 - 20862196
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  20862229 caaaagggtcttataattagggacggatggagta 20862196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 22103933 - 22103966
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  22103933 caaaagggtcttataattagggacggagggagta 22103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 25148492 - 25148459
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    |||||||||||||||||||||||||||| |||||    
T  25148492 caaaagggtcttataattagggacggaatgagta 25148459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 25149126 - 25149159
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  25149126 caaaagggtcttataattagggacggagggagta 25149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 26806148 - 26806115
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  26806148 caaaagggtcttataattagggacggagggagta 26806115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 33868712 - 33868745
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  33868712 caaaagggtcttataattagggacggagggagta 33868745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 35868087 - 35868120
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  35868087 caaaagggtcttataattagggacggagggagta 35868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 36005768 - 36005801
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  36005768 caaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 37728746 - 37728713
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  37728746 caaaagggtcttataattagggacggagggagta 37728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 43868136 - 43868103
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  43868136 caaaagggtcttataattagggacggagggagta 43868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 44543815 - 44543782
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  44543815 caaaagggtcttataattagggacggagggagta 44543782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 45252806 - 45252773
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  45252806 caaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 49543710 - 49543677
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  49543710 caaaagggtcttataattagggacggaagtagta 49543677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 50647717 - 50647684
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  50647717 caaaagggtcttataattagggacggagggagta 50647684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 51284066 - 51284099
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  51284066 caaaagggtcttataattagggacggagggagta 51284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 53361627 - 53361594
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  53361627 caaaagggtcttataattagggacggatggagta 53361594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 50647948 - 50647988
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    |||||||||||||||||||| |||||| |||||| ||||||    
T  50647948 caaaagggtcttataattagagacggagggagtagtaaata 50647988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 39197751 - 39197713
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  39197751 caaaagggtcttataattagggacggagggagtaataaa 39197713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 28016549 - 28016585
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||||| |||||||    
T  28016549 caaaagggtcttataattagggacggaagtagtaata 28016585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 32814466 - 32814426
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  32814466 caaaagggtcttataattagggacggagggagtattaaata 32814426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 38428411 - 38428447
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  38428411 caaaagggtcttataattagggacggagggagtaata 38428447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 26255129 - 26255094
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  26255129 caaaagggtcttataattagggacggagggagtaat 26255094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 39871617 - 39871656
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaat 62  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  39871617 caaaagggtcttataattagggacggagggagtattaaat 39871656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 40300263 - 40300228
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  40300263 caaaagggtcttataattagggacggagggagtaat 40300228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 19920596 - 19920563
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  19920596 caaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 20075111 - 20075144
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  20075111 caaaagggtcttataattagggacggagggagta 20075144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 21295184 - 21295151
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  21295184 caaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 26299349 - 26299316
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  26299349 caaaagggtcttataattagggacggaagtagta 26299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 28060981 - 28061014
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  28060981 caaaagggtcttataattagggacggagggagta 28061014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 29286041 - 29286074
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  29286041 caaaagggtcttataattagggacggagggagta 29286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 32872379 - 32872412
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  32872379 caaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 33858870 - 33858903
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  33858870 caaaagggtcttataattagggacggagggagta 33858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 36698135 - 36698168
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  36698135 caaaagggtcttataattagggacggagggagta 36698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 38858331 - 38858298
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  38858331 caaaagggtcttataattagggacggagggagta 38858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 41026100 - 41026133
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  41026100 caaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 41252134 - 41252093
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    |||||||||||||||  |||||||||| ||||||||||||||    
T  41252134 caaaagggtcttatatatagggacggagggagtaataaataa 41252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 41252365 - 41252398
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  41252365 caaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 44510347 - 44510384
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  44510347 caaaatggtcttataattagggacggagggagtaataa 44510384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 48521062 - 48521029
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  48521062 caaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 17317474 - 17317435
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  17317474 caaaaggatcttataattagggacgg-aggagtaataaata 17317435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 31458030 - 31457994
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| | |||||||    
T  31458030 caaaagggtcttataattagggacggaggaagtaata 31457994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 5593454 - 5593421
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||||||||||    
T  5593454 caaaagggtcttataattagggacggaaggagta 5593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 1774375 - 1774339
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  1774375 caaaagggtcttataattagggacggagggagtaata 1774339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 8948355 - 8948391
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  8948355 caaaagggtcttataattagggacggatggagtaata 8948391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 28192179 - 28192215
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28192179 caaaagggtcttataattagggacggagggagtaata 28192215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 2944276 - 2944311
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2944276 caaaagggtcttataattagggacggagggagtaat 2944311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 51099 - 51133
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  51099 caaaagggtcttataattagggacggagggagtaa 51133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 34568523 - 34568485
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  34568523 caaaagggtcttataattagggacggagggagtattaaa 34568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 39029211 - 39029177
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  39029211 caaaagggtcttataattagggacggagggagtaa 39029177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 8251937 - 8251970
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  8251937 caaaagggtcttataattagggacggagggagta 8251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 8951432 - 8951465
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  8951432 caaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 13153961 - 13153928
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  13153961 caaaagggtcttataattagggacggagggagta 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 17856780 - 17856813
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  17856780 caaaagggtcttataattagggacggagggagta 17856813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 18754177 - 18754144
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  18754177 caaaagggtcttataattagggacggagggagta 18754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 26016602 - 26016569
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  26016602 caaaagggtcttataattagggacggagggagta 26016569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 28572079 - 28572046
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  28572079 caaaagggtcttataattagggacggagggagta 28572046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 28579672 - 28579639
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  28579672 caaaagggtcttataattagggacggagggagta 28579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 29279460 - 29279493
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  29279460 caaaagggtcttataattagggacggagggagta 29279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 32675761 - 32675794
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  32675761 caaaagggtcttataattagggacggagggagta 32675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 40530410 - 40530443
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  40530410 caaaagggtcttataattagggacggagggagta 40530443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 42885087 - 42885054
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  42885087 caaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 44250892 - 44250859
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  44250892 caaaagggtcttataattagggacggagggagta 44250859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 16999029 - 16998993
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  16999029 caaaagggtcttataattatggacggagggagtaata 16998993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 18455752 - 18455720
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagta 56  Q
    |||||||||||||||||||||||||| ||||||    
T  18455752 aaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 44251125 - 44251165
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaata 63  Q
    ||||| ||||||||||||||||||||| |||||||| ||||    
T  44251125 caaaatggtcttataattagggacggagggagtaattaata 44251165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 44502653 - 44502617
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  44502653 caaaaggatcttataattagggacggagggagtaata 44502617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 45283796 - 45283832
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| | |||||||    
T  45283796 caaaagggtcttataattagggacggaggtagtaata 45283832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 11847836 - 11847877
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  11847836 caaaagggtcttataattagggacggagggagtaatacataa 11847877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 12144043 - 12144083
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  12144043 aaaagggtcttataattagggacggagggagtattaaataa 12144083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 231109 - 231143
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  231109 caaaagggtcttataattagggacggagggagtaa 231143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 1147272 - 1147306
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagtaat 58  Q
    |||||||||||||||||||||||||| ||||||||    
T  1147272 aaaagggtcttataattagggacggatggagtaat 1147306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 34301836 - 34301870
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  34301836 caaaagggtcttataattagggacggagggagtaa 34301870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 4844433 - 4844400
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  4844433 caaaagggtcttataattagggacggagggagta 4844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 8743221 - 8743188
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  8743221 caaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 9038675 - 9038642
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9038675 caaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 9388562 - 9388529
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9388562 caaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 15287402 - 15287435
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||| ||||||||||||||||||||||||||||    
T  15287402 caaaatggtcttataattagggacggaaggagta 15287435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 23398143 - 23398176
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  23398143 caaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 30248680 - 30248647
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  30248680 caaaagggtcttataattagggacggagggagta 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 34741730 - 34741763
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  34741730 caaaagggtcttataattagggacggagggagta 34741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 1265982 - 1265945
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1265982 caaaagggtcttataattagggacggagggagtaataa 1265945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 10734527 - 10734563
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10734527 caaaagggtcttataattagggacggagggagtaata 10734563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 7951595 - 7951561
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  7951595 caaaagggtcttataattagggacggagggagtaa 7951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 19571943 - 19571981
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  19571943 caaaagggtcttataattagggacggaggtagtaataaa 19571981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 186362 - 186395
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  186362 caaaagggtcttataattagggacggagggagta 186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 3497573 - 3497540
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  3497573 caaaagggtcttataattagggacggatggagta 3497540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 3686758 - 3686791
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    |||||| |||||||||||||||||||||||||||    
T  3686758 caaaagagtcttataattagggacggaaggagta 3686791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 4976294 - 4976335
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    ||||||||||||||||||||||||||| | |||| |||||||    
T  4976294 caaaagggtcttataattagggacggaggtagtactaaataa 4976335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 6673232 - 6673265
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  6673232 caaaagggtcttataattagggacggagggagta 6673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 9020727 - 9020694
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9020727 caaaagggtcttataattagggacggagggagta 9020694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 9828426 - 9828393
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9828426 caaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 14913681 - 14913648
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  14913681 caaaagggtcttataattagggacggagggagta 14913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 16127292 - 16127259
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  16127292 caaaagggtcttataattagggacggagggagta 16127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 16127523 - 16127556
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  16127523 caaaagggtcttataattagggacggatggagta 16127556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 16153259 - 16153292
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  16153259 caaaagggtcttataattagggacggatggagta 16153292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 22527725 - 22527692
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  22527725 caaaagggtcttataattagggacggagggagta 22527692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 26894877 - 26894910
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  26894877 caaaagggtcttataattagggacggagggagta 26894910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 34662237 - 34662204
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  34662237 caaaagggtcttataattagggacggagggagta 34662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 40004413 - 40004446
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  40004413 caaaagggtcttataattagggacggagggagta 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 16440963 - 16440931
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagta 56  Q
    |||||||||||||||||||||||||| ||||||    
T  16440963 aaaagggtcttataattagggacggagggagta 16440931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 23286478 - 23286514
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| | |||||||    
T  23286478 caaaagggtcttataattagggacggaggtagtaata 23286514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 30771561 - 30771524
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataa 60  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  30771561 caaaagggtcttataattagggacggagggagtaataa 30771524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 4549662 - 4549626
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  4549662 caaaagggtcttataattagggacggagggagtaata 4549626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 47806893 - 47806857
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  47806893 caaaagggtcttataattagggacggagggagtaata 47806857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 52978015 - 52977979
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  52978015 caaaagggtcttataattagggacggagggagtaata 52977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 53277190 - 53277226
Alignment:
Q  24 aaaagggtcttataattagggacggaaggagtaataa 60  Q
    |||||||||||||||||||||||||| ||||||||||    
T  53277190 aaaagggtcttataattagggacggagggagtaataa 53277226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 35675924 - 35675959
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaat 58  Q
    ||||||||||||||||||||||||||| ||||||||    
T  35675924 caaaagggtcttataattagggacggagggagtaat 35675959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 5743663 - 5743697
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  5743663 caaaagggtcttataattagggacggagggagtaa 5743697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 29014097 - 29014063
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  29014097 caaaagggtcttataattagggacggagggagtaa 29014063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 34273223 - 34273257
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  34273223 caaaagggtcttataattagggacggagggagtaa 34273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 4035858 - 4035825
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  4035858 caaaagggtcttataattagggacggagggagta 4035825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 5375561 - 5375594
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  5375561 caaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 9328244 - 9328277
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  9328244 caaaagggtcttataattagggacggagggagta 9328277  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 17610024 - 17610065
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    ||||||| ||||||||||||||||||| |||||| |||||||    
T  17610024 caaaaggatcttataattagggacggagggagtattaaataa 17610065  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 20391441 - 20391474
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  20391441 caaaagggtcttataattagggacggagggagta 20391474  T

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Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 20747434 - 20747467
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  20747434 caaaagggtcttataattagggacggagggagta 20747467  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 26626006 - 26626039
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  26626006 caaaagggtcttataattagggacggagggagta 26626039  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 32032997 - 32033030
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  32032997 caaaagggtcttataattagggacggagggagta 32033030  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 33413551 - 33413518
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  33413551 caaaagggtcttataattagggacggagggagta 33413518  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 44294822 - 44294789
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  44294822 caaaagggtcttataattagggacggagggagta 44294789  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 45097169 - 45097202
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  45097169 caaaagggtcttataattagggacggatggagta 45097202  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 45742810 - 45742843
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  45742810 caaaagggtcttataattagggacggagggagta 45742843  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 47228732 - 47228773
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    ||||||||||||||||||||||||||| | ||||| ||||||    
T  47228732 caaaagggtcttataattagggacggaggaagtaaaaaataa 47228773  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 25708682 - 25708718
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  25708682 caaaaaggtcttataattagggacggagggagtaata 25708718  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 30868805 - 30868841
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| | |||||||    
T  30868805 caaaagggtcttataattagggacggatgtagtaata 30868841  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 53564360 - 53564396
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| | |||||||    
T  53564360 caaaagggtcttataattagggacggaggtagtaata 53564396  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 55563131 - 55563167
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaata 59  Q
    ||||||||||||||||||||||||||| | |||||||    
T  55563131 caaaagggtcttataattagggacggaggtagtaata 55563167  T

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Target: scaffold0674 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 5184 - 5146
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  5184 caaaagggtcttataattagggacggaggtagtaataaa 5146  T

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Target: scaffold0549 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 10186 - 10224
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  10186 caaaagggtcttataattagggacggaggtagtaataaa 10224  T

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Target: scaffold0368 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 8251 - 8213
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  8251 caaaagggtcttacaattagggacggagggagtaataaa 8213  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 18530 - 18492
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  18530 caaaagggtcttataattagggacggaggtagtaataaa 18492  T

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Target: scaffold0161 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 3471 - 3433
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaa 61  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  3471 caaaagggtcttataattagggacggaggtagtaataaa 3433  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 65411 - 65377
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaa 57  Q
    ||||||||||||||||||||||||||| |||||||    
T  65411 caaaagggtcttataattagggacggagggagtaa 65377  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 3786 - 3819
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  3786 caaaagggtcttataattagggacggagggagta 3819  T

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Target: scaffold0339 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 7144 - 7185
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagtaataaataa 64  Q
    ||||||||||||||||||||||||||| | ||||| ||||||    
T  7144 caaaagggtcttataattagggacggaggaagtaaaaaataa 7185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 12098 - 12065
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  12098 caaaagggtcttataattagggacggagggagta 12065  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 51686 - 51719
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  51686 caaaagggtcttataattagggacggagggagta 51719  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 47673 - 47640
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  47673 caaaagggtcttataattagggacggagggagta 47640  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 259126 - 259159
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  259126 caaaagggtcttataattagggacggagggagta 259159  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 355335 - 355368
Alignment:
Q  23 caaaagggtcttataattagggacggaaggagta 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  355335 caaaagggtcttataattagggacggagggagta 355368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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