View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19615_high_93 (Length: 237)
Name: NF19615_high_93
Description: NF19615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19615_high_93 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 36409792 - 36409573
Alignment:
| Q |
2 |
gagaagaatgtagatacatataccactatcaaattttaaatttatgaaattcaaattcaaaattagatgtagaagaactcagacgttatgtagagaaaac |
101 |
Q |
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| T |
36409792 |
gagaagaatgtagatacatataccactatcaaattttaaatttatgaaattcaaattcaaaattagatgtagaagaactcagacgttatatagagaaaac |
36409693 |
T |
|
| Q |
102 |
aagtaaaatagaagaagctattgcttattaataataaaagtaaagactcaaaatagaactgtatattttgaataaatttgaagcaaagataaattaaata |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36409692 |
aagtaaaatagaagaagctattgcttattaataataaaagtaaagactcaaaatagaactgtatattttgaataaatttgaagcaaagataaattaaata |
36409593 |
T |
|
| Q |
202 |
ttggaatttatagttttaca |
221 |
Q |
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|||||||||||||||||||| |
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| T |
36409592 |
ttggaatttatagttttaca |
36409573 |
T |
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