View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19615_low_39 (Length: 393)
Name: NF19615_low_39
Description: NF19615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19615_low_39 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 135 - 374
Target Start/End: Original strand, 26313934 - 26314181
Alignment:
| Q |
135 |
tttaataaaagcaaaatcttccgttgcctcacaagtcacaacacacatatataaatggatcaattaatctccagaactttgagagcaactaaaatttgta |
234 |
Q |
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| T |
26313934 |
tttaataaaagcaa--tcttccattgcctcaaaagtcacaacacacatatataaatggatcaattaatctccagaactttgagagcaactaaaatttgta |
26314031 |
T |
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| Q |
235 |
tttaaatgtaaagtaaaatttgtctcagaccaattccaaattataggaaag----------nnnnnnnntaaataaataatttgaggtatttatgaatgt |
324 |
Q |
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| T |
26314032 |
tttaaatgtaaagtaaaatttgtctcagaccaattccaaattataggaaagaaaaaataaataaataataaaataaataatttgaggtatttataaatgt |
26314131 |
T |
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| Q |
325 |
gtgaagctagcttataatttaattataacagaacatgtaaagctttaggt |
374 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26314132 |
gtgaagctagcttataatttaattataacagaacatgtaaagctttaggt |
26314181 |
T |
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