View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19615_low_56 (Length: 354)
Name: NF19615_low_56
Description: NF19615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19615_low_56 |
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Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 16 - 342
Target Start/End: Original strand, 36865794 - 36866120
Alignment:
| Q |
16 |
attaaaaccaatgttgctggcagcaattggtaaccgtgaaaaactgaaggggtgcatgaagagagggaagataataaaggaaaagagaaggatatgctta |
115 |
Q |
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| T |
36865794 |
attaaaaccaatgttggtggcagcaattggtaaccgtgaaaaactgaaggggtgcaagaagagagggaagataataaaggaaaagagaaggatatgctta |
36865893 |
T |
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| Q |
116 |
ctgcattagtaagtatcataacctttgattttgttttgatcttagggttttaaattaagggcaatggttagcaattaatcataacgtgacttacactctc |
215 |
Q |
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| T |
36865894 |
ctgcattagtaagtatcataacctttgattttgttttgatcttagggttttaaattaagggcaatggttagcaattaatcataacgtgacttacactctc |
36865993 |
T |
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| Q |
216 |
cctttcactatagttattgtgattaatctttaagatcaaaacaaaatcaaaggctatgatgtatagtaactttaatagcttatttatcgattaaacatgt |
315 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
36865994 |
cctttcactatagttattgtgattaatctttaaaatcaaaacaaaataaaaggctatgatgtatagtaactttaatagcttatttatcgagtaaacatgt |
36866093 |
T |
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| Q |
316 |
aatgatctaagatacgcccgttagaat |
342 |
Q |
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|||||||||||||| |||||||||||| |
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| T |
36866094 |
aatgatctaagatatgcccgttagaat |
36866120 |
T |
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