View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19615_low_94 (Length: 239)

Name: NF19615_low_94
Description: NF19615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19615_low_94
NF19615_low_94
[»] chr2 (5 HSPs)
chr2 (1-223)||(43924633-43924855)
chr2 (125-212)||(32121631-32121719)
chr2 (118-208)||(42014112-42014202)
chr2 (125-212)||(34415003-34415090)
chr2 (56-151)||(41256111-41256207)
[»] chr7 (4 HSPs)
chr7 (37-205)||(29686936-29687103)
chr7 (45-205)||(25880251-25880419)
chr7 (47-129)||(3221022-3221105)
chr7 (140-205)||(18045697-18045761)
[»] chr5 (4 HSPs)
chr5 (45-223)||(17134748-17134929)
chr5 (161-223)||(18180286-18180348)
chr5 (125-205)||(24204170-24204250)
chr5 (161-215)||(22415615-22415669)
[»] chr4 (6 HSPs)
chr4 (45-206)||(41968080-41968241)
chr4 (162-220)||(54051723-54051781)
chr4 (161-218)||(18407341-18407398)
chr4 (131-202)||(47450145-47450216)
chr4 (163-205)||(9075514-9075556)
chr4 (161-206)||(6368920-6368965)
[»] chr3 (4 HSPs)
chr3 (125-205)||(4143760-4143840)
chr3 (125-205)||(4159568-4159648)
chr3 (131-205)||(4478212-4478286)
chr3 (164-206)||(30458106-30458148)
[»] chr1 (3 HSPs)
chr1 (125-205)||(15249723-15249803)
chr1 (162-212)||(11896875-11896925)
chr1 (135-204)||(11356238-11356306)
[»] chr6 (4 HSPs)
chr6 (127-205)||(33553512-33553590)
chr6 (125-196)||(32419509-32419580)
chr6 (125-196)||(32425350-32425421)
chr6 (127-223)||(11643431-11643527)
[»] chr8 (2 HSPs)
chr8 (131-206)||(17018184-17018259)
chr8 (131-206)||(17548621-17548696)
[»] scaffold0150 (2 HSPs)
scaffold0150 (131-206)||(11273-11348)
scaffold0150 (131-206)||(16763-16838)


Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 43924633 - 43924855
Alignment:
Q  1 taaatctagtactaccacgnnnnnnnacccttgttgatcattatactctatgcactcattcttcacaaattccacctataagtacccacaaattcttcac 100  Q
    ||||| |||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43924633 taaatttagtactaccacgtttttttacccttgttgatcattacactctatgcactcattcttcacaaattccacctataagtacccacaaattcttcac 43924732  T
Q  101 caattctcattccaacatctcacattctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgt 200  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43924733 aaattctcattccaacatctcacattctcctttcttctacaatgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgt 43924832  T
Q  201 atgaatagtcaatggacatggtg 223  Q
    |||||||||||||||||||||||    
T  43924833 atgaatagtcaatggacatggtg 43924855  T

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Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 32121719 - 32121631
Alignment:
Q  125 ttctcctttctt-ctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaa 212  Q
    |||||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||||| |||||||| |||||||||||| |||||    
T  32121719 ttctcctttctttctacaacgtgtttccatcgttagactttcatacaaaaatgttactctaatattttagcgattgtatgaatggtcaa 32121631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 42014202 - 42014112
Alignment:
Q  118 tctcacattctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaatag 208  Q
    |||| |||||||||||||| ||||||||| ||||| | ||   |||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  42014202 tctctcattctcctttcttatacaacgtgcttccatcattgacctttcatacaaaaagggtactctagtgttttatagattgtatgaatag 42014112  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 34415090 - 34415003
Alignment:
Q  125 ttctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaa 212  Q
    ||||| |||||||||||| ||| || || ||||   |||| ||||||||||||||||||| |||||||| |||||| ||||| |||||    
T  34415090 ttctcttttcttctacaatgtgcttgcatcgttggtcttttatacaaaaaggttactctaatattttagagattgtctgaatggtcaa 34415003  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 41256111 - 41256207
Alignment:
Q  56 tcattcttcacaaattccacct-ataagtacccacaaattcttcaccaattctcattccaacatctcacattctcctttcttctacaacgtgtttcc 151  Q
    |||| ||||||||||| | ||| |||| ||||||  ||| |||||| | ||||||||| | |||||||||||||| |||||||||||| ||| ||||    
T  41256111 tcatccttcacaaatttctccttataaatacccatcaatccttcacaatttctcattctatcatctcacattctcttttcttctacaatgtgcttcc 41256207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 205
Target Start/End: Complemental strand, 29687103 - 29686936
Alignment:
Q  37 atcattatactctatgcactcattcttcacaaattccacctataagtacccacaaattcttcaccaattctcattccaacatctcacattctcctttctt 136  Q
    ||||||| ||||||||||||||||||| |||||  || || |||| || |||  ||| | |||| |||  |||||||| ||||| |||||||||||||||    
T  29687103 atcattacactctatgcactcattctttacaaacccc-ccaataaatatccatcaatccctcacaaataatcattccatcatctaacattctcctttctt 29687005  T
Q  137 ctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    |||||| || |||||||||||   |||| ||||||||| |||||||||| |||||||| ||||||||||    
T  29687004 ctacaatgtatttccaccgttgcccttttatacaaaaatgttactctaggattttaggcattgtatgaa 29686936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 25880251 - 25880419
Alignment:
Q  45 actctatgcactcattcttcacaaattc-cacctataagtacccacaaattcttcaccaattctcattccaacatctcacattctccttt--------ct 135  Q
    |||||||||||||||||||||||||||| || || ||  ||||||  ||| |||| |||||||||||| || |||||||||||||| |||        ||    
T  25880251 actctatgcactcattcttcacaaattctcatctgtatatacccatcaatccttc-ccaattctcatttcatcatctcacattctctttttctcttttct 25880349  T
Q  136 tctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    ||| ||| ||| || |||||||   |||||||||||||| |||||| ||||||||||| |||||||||||    
T  25880350 tctgcaatgtgctttcaccgttggtctttcatacaaaaatgttactttagtattttagtgattgtatgaa 25880419  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 3221022 - 3221105
Alignment:
Q  47 tctatgcactcattcttcacaaattccac-ctataagtacccacaaattcttcaccaattctcattccaacatctcacattctc 129  Q
    |||| |||||||||||||||||||||||| |||||| ||||||  ||| |||||  | ||||||||||| ||||| ||||||||    
T  3221022 tctacgcactcattcttcacaaattccacactataaatacccattaatccttcaaaatttctcattccatcatctgacattctc 3221105  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 18045697 - 18045761
Alignment:
Q  140 caacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    ||||||| ||||||||||   ||||||||||||| |||||||||| |||||||  |||||||||||    
T  18045697 caacgtgcttccaccgttggcctttcatacaaaa-ggttactctaatattttatagattgtatgaa 18045761  T

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Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 17134748 - 17134929
Alignment:
Q  45 actctatgcactcattcttcacaaattccacc-tataagtacccacaaattcttcaccaattctcattccaacatctcacat-tctcct---ttcttcta 139  Q
    ||||||||||| ||| ||||||||| ||  || ||||| |||||| |||| |||||| ||||||| ||||| ||||||| || ||||||   ||||||||    
T  17134748 actctatgcac-catccttcacaaaatctcccatataaatacccaaaaatccttcacaaattctcgttccatcatctcaaatctctcctcttttcttcta 17134846  T
Q  140 caacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaatggacatggtg 223  Q
    ||| |||||||||| |||   ||||||||||||| |||||||||||||||| ||||||||||||| ||||||| ||| ||||||    
T  17134847 caatgtgtttccactgttgctctttcatacaaaa-ggttactctagtatttcagggattgtatgattagtcaaaggatatggtg 17134929  T

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Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 18180286 - 18180348
Alignment:
Q  161 ctttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaatggacatggtg 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || || | ||||||||    
T  18180286 ctttcatacaaaaaggttactctagtattttatggattgtatgaatggtaaaagaacatggtg 18180348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 24204170 - 24204250
Alignment:
Q  125 ttctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    ||||| |||||||| ||| ||| |||||  ||| | |||||||||||||| ||||||||||||||||| ||||||||||||    
T  24204170 ttctcttttcttctgcaatgtgattccattgttgtcctttcatacaaaaatgttactctagtattttatggattgtatgaa 24204250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 22415669 - 22415615
Alignment:
Q  161 ctttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaatgg 215  Q
    ||||||||||||||||  ||||||| |||| ||||||||||||||| ||||||||    
T  22415669 ctttcatacaaaaaggaaactctagaatttcagggattgtatgaatggtcaatgg 22415615  T

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Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 206
Target Start/End: Original strand, 41968080 - 41968241
Alignment:
Q  45 actctatgcactcattcttcacaaattccacc-tataagtacccacaaattcttcaccaattctcattccaacatctcacattctcctttcttctacaac 143  Q
    ||||||||||| ||| |||| ||||||||||| ||||| ||| ||   || |||||| ||||||||||||| ||||||| |||||| ||||||||||||     
T  41968080 actctatgcac-catacttctcaaattccaccctataaatactcatcgatccttcacaaattctcattccatcatctcaaattctcttttcttctacaat 41968178  T
Q  144 gtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaat 206  Q
    ||  || ||| |||   ||||||||||||||||||||| |||  | ||| |||||||||||||    
T  41968179 gtacttacactgttggcctttcatacaaaaaggttactttagcgtcttaaggattgtatgaat 41968241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 54051723 - 54051781
Alignment:
Q  162 tttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaatggacatg 220  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||| ||||| |||||||    
T  54051723 tttcatataaaaaggctactctagtattttaaggattgtatgaatggtcaaaggacatg 54051781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 18407341 - 18407398
Alignment:
Q  161 ctttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaatggaca 218  Q
    |||||||| ||||| ||||||||| | ||||||||||||||||||| ||||| |||||    
T  18407341 ctttcatataaaaatgttactctaatgttttagggattgtatgaatggtcaaaggaca 18407398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 47450145 - 47450216
Alignment:
Q  131 tttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtat 202  Q
    |||||||||||||||| ||||||| ||   |||||||||||||||  ||| ||||||| ||| |||||||||    
T  47450145 tttcttctacaacgtgcttccacctttgacctttcatacaaaaagactacactagtatattaaggattgtat 47450216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 9075514 - 9075556
Alignment:
Q  163 ttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  9075514 ttcatacaaaaaggttactatattattttagtgattgtatgaa 9075556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 6368965 - 6368920
Alignment:
Q  161 ctttcatacaaaaaggttactctagtattttagggattgtatgaat 206  Q
    ||||| ||||||||||||||| ||| ||||||||||||| ||||||    
T  6368965 ctttcgtacaaaaaggttactttagcattttagggattgcatgaat 6368920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 4143840 - 4143760
Alignment:
Q  125 ttctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    ||||| |||||||| ||| ||| ||||||||||   ||||||||| |||||||||||||| ||||||||||||||||||||    
T  4143840 ttctcttttcttctgcaatgtgcttccaccgttgacctttcataccaaaaggttactctaatattttagggattgtatgaa 4143760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 4159648 - 4159568
Alignment:
Q  125 ttctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    ||||| |||||||| ||| ||| ||||||||||   |||||| || |||| ||||||||| |||||||| |||||||||||    
T  4159648 ttctcttttcttctgcaatgtgcttccaccgttgacctttcagaccaaaaagttactctaatattttagagattgtatgaa 4159568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 4478212 - 4478286
Alignment:
Q  131 tttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    |||||||||||| ||| ||||| ||||   || ||||| |||||||||||| || ||||||||| ||||||||||    
T  4478212 tttcttctacaatgtgcttccatcgttggcctatcatataaaaaggttactataatattttaggaattgtatgaa 4478286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 30458148 - 30458106
Alignment:
Q  164 tcatacaaaaaggttactctagtattttagggattgtatgaat 206  Q
    |||||||||||  ||||| ||||||||||||||||||||||||    
T  30458148 tcatacaaaaaaattactatagtattttagggattgtatgaat 30458106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 15249723 - 15249803
Alignment:
Q  125 ttctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    ||||| |||||||||||| ||| |||||| ||||  |||||||||||||||||||||||| ||||| || |||||||||||    
T  15249723 ttctcttttcttctacaatgtgcttccactgttagtctttcatacaaaaaggttactctaatatttcagagattgtatgaa 15249803  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 11896875 - 11896925
Alignment:
Q  162 tttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaa 212  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||| |||||    
T  11896875 tttcatacaaaaatgttactctaatattttatggattgtatgaatggtcaa 11896925  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 11356238 - 11356306
Alignment:
Q  135 ttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatga 204  Q
    |||||||| ||||||||| |||||  ||||| |||||||||  |||||||| ||||||||||||||||||    
T  11356238 ttctacaatgtgtttccatcgttagcctttc-tacaaaaagaatactctagaattttagggattgtatga 11356306  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 33553590 - 33553512
Alignment:
Q  127 ctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaa 205  Q
    |||||||||||||||| ||||||||| ||||   |||||||| ||||||| || ||||| |||||||||||||||||||    
T  33553590 ctcctttcttctacaatgtgtttccatcgttgacctttcatataaaaaggctattctagaattttagggattgtatgaa 33553512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 32419580 - 32419509
Alignment:
Q  125 ttctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttaggga 196  Q
    ||||| ||||||||||||  || ||| ||||||   |||||||||||||| ||||||||| |||||||||||    
T  32419580 ttctcttttcttctacaaattgcttctaccgttggtctttcatacaaaaaagttactctaatattttaggga 32419509  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 32425421 - 32425350
Alignment:
Q  125 ttctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttaggga 196  Q
    ||||| ||||||||||||  || ||| ||||||   |||||||||||||| ||||||||| |||||||||||    
T  32425421 ttctcttttcttctacaaattgcttctaccgttggtctttcatacaaaaaagttactctaatattttaggga 32425350  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 11643431 - 11643527
Alignment:
Q  127 ctcctttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaatagtcaatggacatggtg 223  Q
    |||||||||||||||| ||||||| | | ||   |||||||||||||||  |||| ||  ||||||| |||||||||||  ||||| ||| ||||||    
T  11643431 ctcctttcttctacaatgtgtttctatcatttgtctttcatacaaaaagactactttataattttagagattgtatgaacggtcaacggagatggtg 11643527  T

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Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 17018259 - 17018184
Alignment:
Q  131 tttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaat 206  Q
    |||||||||||| ||||||||||||||   ||||| ||||||||| ||||| || |||||||| ||||||||||||    
T  17018259 tttcttctacaatgtgtttccaccgttgacctttcttacaaaaagtttactatactattttagagattgtatgaat 17018184  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 17548696 - 17548621
Alignment:
Q  131 tttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaat 206  Q
    |||||||||||| ||||||||||||||   ||||| ||||||||| ||||| || |||||||| ||||||||||||    
T  17548696 tttcttctacaatgtgtttccaccgttgacctttcttacaaaaagtttactatactattttagagattgtatgaat 17548621  T

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Target: scaffold0150 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 11273 - 11348
Alignment:
Q  131 tttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaat 206  Q
    |||||||||||| ||||||||||||||   ||||| |||| |||| ||||| || |||| ||| ||||||||||||    
T  11273 tttcttctacaatgtgtttccaccgttgacctttcttacagaaagcttactatattattgtagagattgtatgaat 11348  T

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Target: scaffold0150; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 16763 - 16838
Alignment:
Q  131 tttcttctacaacgtgtttccaccgttatgctttcatacaaaaaggttactctagtattttagggattgtatgaat 206  Q
    |||||||||||| ||||||||||||||   ||||| |||| |||| ||||| || |||| ||| ||||||||||||    
T  16763 tttcttctacaatgtgtttccaccgttgacctttcttacagaaagcttactatattattgtagagattgtatgaat 16838  T

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