View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19618_high_32 (Length: 282)
Name: NF19618_high_32
Description: NF19618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19618_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 38871381 - 38871657
Alignment:
| Q |
1 |
ataaatgaaataaattgagtagtaatatcttgccaaaaagaaaaattgagtagtaatttttacaaactaataatcttatcgggtattaattaatgtaatc |
100 |
Q |
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| T |
38871381 |
ataaatgaaataaattgagtagtaatatcttgccaaaaagaaaaattgaatagtaatttttacaaactaataatcttatcgggtattaattaatgttatc |
38871480 |
T |
|
| Q |
101 |
acggttattataaagaaaatgttaatttgtgtccttaaaatacaaattttagggacacttttagggacatcggaacttttgatgcttaattcaaccctac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38871481 |
acggttattataaagaaaatgttaatttgtgtccttaaaatataaattttagggacacttttagggacatcggaacttttgatgcttaattcaaccctac |
38871580 |
T |
|
| Q |
201 |
cacagaacttttgatgcttgtgaactctaagaaatatgcatcgcaagataattttttatcttattggtatgcctttg |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||| |
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| T |
38871581 |
cacagaacttttgatgcttgtgaactctaagaaatatgcatcgcaagataattttctatcttatcggtatgcttttg |
38871657 |
T |
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