View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19618_high_44 (Length: 239)
Name: NF19618_high_44
Description: NF19618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19618_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 35821353 - 35821132
Alignment:
| Q |
1 |
aaacacgtttacgataatagttgttttaaggatattgtttaagaaatattaaa-taaaagtttggttgaaaaaataagtcaaataaattaacaaacacat |
99 |
Q |
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|||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35821353 |
aaacacttttacgataacagttgttttaaggatattgtttaagaaatattaaaataaaagtttggttgaaaaaataagtcaaataaattaacaaacacat |
35821254 |
T |
|
| Q |
100 |
tgtaattgtttaatcaataccctaaaaacattaatttttggttggattttgtttatcttcctgcctaattttggattattagacatgtttcccttaaaaa |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
35821253 |
tgtaattgtttaatcaataccctaaaaacattaatttttagttggattttgtttatcttcctgcctaattttggattattagacctgtttcccttaaaaa |
35821154 |
T |
|
| Q |
200 |
tcaaatgattaacgcaaagaat |
221 |
Q |
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||||||||||||||||||| |
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| T |
35821153 |
ctgaatgattaacgcaaagaat |
35821132 |
T |
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