View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19619_low_7 (Length: 239)
Name: NF19619_low_7
Description: NF19619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19619_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 39077387 - 39077598
Alignment:
| Q |
12 |
atgaacaatgtatagttatgaatttcagataataataataatgcttaaatcatacgacagtaaactaaatttgaatgaactttacccttaattctggtta |
111 |
Q |
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| T |
39077387 |
atgaacaatgtatagttatgaatttcagataataataataatgcttaaatcatacgacagtaaactaaatttgaatgaattttacccttaattctggtta |
39077486 |
T |
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| Q |
112 |
taacccatttttgtggttgcttatgttactattttatttttgatccaatgtggctgctactttaatctgaaaggcttcctaagacttcaactgcaaaccc |
211 |
Q |
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| T |
39077487 |
taacccatttttgtggttgcttatgttactattttatttttgatccaatgtggctgctactttaatctgaaaggctttctaagacttcaactgcaaaccc |
39077586 |
T |
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| Q |
212 |
ataagacaaatt |
223 |
Q |
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|||||||||||| |
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| T |
39077587 |
ataagacaaatt |
39077598 |
T |
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