View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19620_low_17 (Length: 203)

Name: NF19620_low_17
Description: NF19620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19620_low_17
NF19620_low_17
[»] chr3 (31 HSPs)
chr3 (79-189)||(36231616-36231726)
chr3 (20-77)||(45513687-45513744)
chr3 (20-77)||(19550363-19550420)
chr3 (20-77)||(42671962-42672019)
chr3 (20-77)||(43945496-43945553)
chr3 (20-77)||(54106380-54106437)
chr3 (20-77)||(24981407-24981464)
chr3 (28-77)||(27483868-27483917)
chr3 (28-77)||(33491219-33491268)
chr3 (28-77)||(47069937-47069986)
chr3 (20-77)||(51244741-51244798)
chr3 (30-77)||(3376386-3376433)
chr3 (30-77)||(29458285-29458332)
chr3 (30-77)||(33074360-33074407)
chr3 (19-77)||(24135-24193)
chr3 (28-78)||(45145244-45145294)
chr3 (20-77)||(51697635-51697693)
chr3 (20-77)||(6902395-6902452)
chr3 (20-77)||(27992357-27992414)
chr3 (20-77)||(29651785-29651842)
chr3 (28-77)||(34266520-34266569)
chr3 (28-77)||(41351274-41351323)
chr3 (19-76)||(44544098-44544155)
chr3 (20-77)||(45101430-45101487)
chr3 (20-77)||(52663559-52663616)
chr3 (28-77)||(53282096-53282145)
chr3 (20-77)||(54898158-54898215)
chr3 (33-73)||(32853445-32853485)
chr3 (33-77)||(43775475-43775519)
chr3 (33-77)||(49123640-49123684)
chr3 (33-77)||(55141561-55141605)
[»] chr7 (23 HSPs)
chr7 (20-75)||(8265068-8265123)
chr7 (20-77)||(17896592-17896649)
chr7 (20-77)||(18470424-18470481)
chr7 (20-77)||(20035165-20035222)
chr7 (20-77)||(20045576-20045633)
chr7 (20-77)||(31430676-31430733)
chr7 (20-77)||(32528397-32528454)
chr7 (20-77)||(33921843-33921900)
chr7 (20-77)||(44480211-44480268)
chr7 (19-77)||(12838146-12838204)
chr7 (28-77)||(7477275-7477324)
chr7 (20-77)||(26632249-26632306)
chr7 (20-77)||(32966118-32966175)
chr7 (20-77)||(36922356-36922413)
chr7 (33-77)||(41889399-41889443)
chr7 (18-77)||(47459760-47459819)
chr7 (19-77)||(47408230-47408288)
chr7 (28-77)||(7312734-7312783)
chr7 (28-77)||(8381943-8381992)
chr7 (28-77)||(33099912-33099961)
chr7 (21-77)||(31399002-31399057)
chr7 (33-77)||(33257998-33258042)
chr7 (29-77)||(35112546-35112594)
[»] scaffold0007 (1 HSPs)
scaffold0007 (20-77)||(77205-77262)
[»] chr6 (20 HSPs)
chr6 (20-77)||(373840-373897)
chr6 (21-77)||(1252283-1252339)
chr6 (27-78)||(3850436-3850487)
chr6 (19-77)||(7235557-7235615)
chr6 (28-77)||(1923969-1924018)
chr6 (20-77)||(30388838-30388895)
chr6 (20-77)||(32359507-32359564)
chr6 (33-77)||(30237095-30237139)
chr6 (30-77)||(17601217-17601264)
chr6 (19-77)||(23777413-23777471)
chr6 (19-77)||(26485751-26485809)
chr6 (20-77)||(12732292-12732349)
chr6 (28-77)||(17124060-17124109)
chr6 (33-78)||(17193274-17193319)
chr6 (20-77)||(17836010-17836067)
chr6 (20-77)||(24663496-24663553)
chr6 (28-77)||(34607215-34607264)
chr6 (28-77)||(34730677-34730726)
chr6 (33-77)||(9838202-9838246)
chr6 (21-77)||(23923781-23923837)
[»] chr5 (32 HSPs)
chr5 (20-77)||(1087996-1088053)
chr5 (20-77)||(25344059-25344116)
chr5 (19-77)||(4175542-4175600)
chr5 (19-77)||(34261411-34261469)
chr5 (20-77)||(7579731-7579788)
chr5 (20-77)||(8825156-8825213)
chr5 (20-77)||(39073143-39073200)
chr5 (30-77)||(37303180-37303227)
chr5 (19-77)||(7408430-7408488)
chr5 (20-77)||(1297801-1297858)
chr5 (28-77)||(5119277-5119326)
chr5 (20-77)||(7403951-7404008)
chr5 (20-77)||(9076170-9076227)
chr5 (20-77)||(22582571-22582628)
chr5 (28-77)||(36239557-36239606)
chr5 (20-77)||(38363288-38363345)
chr5 (30-77)||(16124333-16124380)
chr5 (30-77)||(17869376-17869423)
chr5 (30-76)||(3686790-3686836)
chr5 (28-70)||(6330927-6330969)
chr5 (19-77)||(6689698-6689756)
chr5 (28-77)||(2133977-2134026)
chr5 (20-77)||(2674041-2674098)
chr5 (28-77)||(4985246-4985295)
chr5 (20-77)||(6754242-6754299)
chr5 (20-77)||(18020831-18020888)
chr5 (28-77)||(18437394-18437443)
chr5 (20-77)||(38017340-38017397)
chr5 (20-77)||(38702240-38702297)
chr5 (33-77)||(4017513-4017557)
chr5 (33-77)||(12664957-12665001)
chr5 (21-77)||(18794882-18794938)
[»] chr4 (28 HSPs)
chr4 (20-77)||(3436134-3436191)
chr4 (20-77)||(5374417-5374474)
chr4 (20-77)||(39683781-39683838)
chr4 (20-77)||(8735509-8735566)
chr4 (20-77)||(13629260-13629317)
chr4 (20-77)||(38617374-38617431)
chr4 (20-77)||(16464849-16464906)
chr4 (20-77)||(22678376-22678433)
chr4 (20-77)||(26620418-26620475)
chr4 (20-77)||(33755098-33755155)
chr4 (20-77)||(36408843-36408900)
chr4 (20-77)||(36423009-36423066)
chr4 (20-77)||(39671445-39671502)
chr4 (20-77)||(44013980-44014037)
chr4 (20-77)||(44069151-44069208)
chr4 (22-77)||(23237750-23237805)
chr4 (20-77)||(8741691-8741748)
chr4 (20-77)||(16664361-16664418)
chr4 (20-77)||(21044814-21044871)
chr4 (48-77)||(26906484-26906513)
chr4 (32-77)||(34925421-34925466)
chr4 (28-77)||(35232373-35232422)
chr4 (28-77)||(55703040-55703089)
chr4 (33-77)||(354086-354130)
chr4 (49-77)||(13435257-13435285)
chr4 (33-77)||(19093233-19093277)
chr4 (33-77)||(52057531-52057575)
chr4 (33-77)||(52677225-52677269)
[»] chr1 (33 HSPs)
chr1 (20-77)||(1024673-1024730)
chr1 (20-77)||(52749132-52749189)
chr1 (28-77)||(12124761-12124810)
chr1 (20-77)||(13566796-13566853)
chr1 (20-77)||(13507887-13507944)
chr1 (20-77)||(13515075-13515132)
chr1 (20-77)||(19349442-19349499)
chr1 (20-77)||(29830870-29830927)
chr1 (20-77)||(35483844-35483901)
chr1 (20-77)||(37609364-37609421)
chr1 (28-77)||(39412582-39412631)
chr1 (20-77)||(43500623-43500680)
chr1 (20-77)||(45368205-45368262)
chr1 (30-77)||(31487852-31487899)
chr1 (30-77)||(48508250-48508297)
chr1 (33-75)||(4100985-4101027)
chr1 (20-77)||(18033888-18033946)
chr1 (19-77)||(51974233-51974291)
chr1 (20-77)||(1677315-1677372)
chr1 (20-77)||(8464320-8464377)
chr1 (28-77)||(13699291-13699340)
chr1 (28-77)||(19929537-19929586)
chr1 (20-77)||(20605687-20605744)
chr1 (20-77)||(28679138-28679195)
chr1 (28-77)||(30686528-30686577)
chr1 (20-77)||(37437116-37437173)
chr1 (20-77)||(38648574-38648631)
chr1 (20-77)||(44818571-44818628)
chr1 (28-77)||(49908253-49908302)
chr1 (28-77)||(51972352-51972401)
chr1 (33-77)||(10676019-10676063)
chr1 (33-77)||(35700451-35700495)
chr1 (33-77)||(46096663-46096707)
[»] chr2 (24 HSPs)
chr2 (21-77)||(38186122-38186178)
chr2 (20-77)||(10263874-10263931)
chr2 (20-77)||(15183070-15183127)
chr2 (20-77)||(15893649-15893706)
chr2 (20-77)||(19594467-19594524)
chr2 (20-77)||(34399319-34399376)
chr2 (28-77)||(36404918-36404967)
chr2 (20-77)||(479042-479099)
chr2 (20-77)||(3363701-3363758)
chr2 (20-77)||(14288548-14288605)
chr2 (20-77)||(14308510-14308567)
chr2 (20-77)||(26342697-26342754)
chr2 (20-77)||(30264671-30264728)
chr2 (20-77)||(36375690-36375747)
chr2 (21-77)||(3376347-3376403)
chr2 (22-77)||(10812316-10812371)
chr2 (19-78)||(25558254-25558313)
chr2 (19-77)||(2012978-2013036)
chr2 (28-77)||(34357295-34357344)
chr2 (33-77)||(4883720-4883764)
chr2 (33-77)||(11560129-11560173)
chr2 (29-77)||(13000989-13001037)
chr2 (33-77)||(14541448-14541492)
chr2 (33-77)||(36824508-36824552)
[»] chr8 (27 HSPs)
chr8 (22-77)||(4057405-4057460)
chr8 (20-77)||(26062824-26062881)
chr8 (20-77)||(34046968-34047025)
chr8 (20-77)||(16656817-16656874)
chr8 (20-77)||(23430026-23430083)
chr8 (20-77)||(23848622-23848679)
chr8 (20-77)||(33935126-33935183)
chr8 (20-77)||(35052170-35052227)
chr8 (20-77)||(38128613-38128670)
chr8 (20-77)||(38482858-38482915)
chr8 (33-77)||(167556-167600)
chr8 (33-77)||(36058349-36058393)
chr8 (30-77)||(17074658-17074705)
chr8 (30-77)||(17573565-17573612)
chr8 (30-77)||(18842646-18842693)
chr8 (19-77)||(2335550-2335608)
chr8 (19-77)||(3513474-3513532)
chr8 (19-77)||(36112006-36112064)
chr8 (28-77)||(14263661-14263710)
chr8 (28-77)||(15596461-15596510)
chr8 (20-77)||(25703644-25703700)
chr8 (20-73)||(34981950-34982003)
chr8 (20-77)||(45281444-45281500)
chr8 (33-77)||(10180487-10180531)
chr8 (33-77)||(12342693-12342737)
chr8 (33-77)||(21651825-21651869)
chr8 (33-77)||(23855674-23855718)
[»] scaffold0014 (1 HSPs)
scaffold0014 (19-77)||(195653-195710)
[»] scaffold0001 (1 HSPs)
scaffold0001 (33-77)||(419572-419616)
[»] scaffold0280 (1 HSPs)
scaffold0280 (28-77)||(8271-8320)
[»] scaffold0471 (1 HSPs)
scaffold0471 (19-77)||(1883-1941)
[»] scaffold0886 (1 HSPs)
scaffold0886 (28-77)||(4632-4681)
[»] scaffold0274 (1 HSPs)
scaffold0274 (28-77)||(314-363)
[»] scaffold0040 (1 HSPs)
scaffold0040 (20-77)||(69217-69274)


Alignment Details
Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 36231726 - 36231616
Alignment:
Q  79 caacaaagtaaataatttcgcataactttgtaagtaagtaaataatatcctacaagggcaggctaatatttcagttttaattcaacctctagaagacccc 178  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36231726 caacaaagtaaataatttcgcataactttgtaagtgagtaaataatatcctacaagggcaggctaatatttcagttttaattcaacctctagaagacccc 36231627  T
Q  179 actagtattat 189  Q
    |||| ||||||    
T  36231626 actattattat 36231616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 45513687 - 45513744
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  45513687 caataaactatatttttactataatgaccttattcatttaatatctcatttcatatat 45513744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 19550420 - 19550363
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  19550420 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 19550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 42671962 - 42672019
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| ||||||||||| || |||||| ||||||||||| |||||||||||    
T  42671962 caataaactatacttttactataataaccttattcatttaatatcttatttcatatat 42672019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 43945553 - 43945496
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| ||||||| |||  |||||||| |||||||||||||||||||||||    
T  43945553 caataaactatacttttactgtaatgatcttattcatttaatatctcatttcatatat 43945496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 54106437 - 54106380
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  54106437 caataaactatacttttactataatgaccttattcatttaatatctcatttcatatat 54106380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 24981464 - 24981407
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| ||||||||| |||||||||||||    
T  24981464 caataaactatacttttactataatgaccttattcatttaatatatcatttcatatat 24981407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 27483868 - 27483917
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  27483868 tatatttttactataatgaccttattcatttaatatctcatttcatatat 27483917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 33491219 - 33491268
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  33491219 tatacttttactataataaccttatttatttaatatctcatttcatatat 33491268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 47069937 - 47069986
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| ||| ||||| |||||||||||||||||||||||    
T  47069937 tatacttttactataataattttattcatttaatatctcatttcatatat 47069986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 51244798 - 51244741
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| | ||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  51244798 caataagccatatttttattataatgatcttattcatttaatatctcatttcatatat 51244741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 3376386 - 3376433
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||||    
T  3376386 tatttttactataatgaccttattcatttaatatctcatttcatatat 3376433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 29458285 - 29458332
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  29458285 tatttttactataataaccttatttatttaatatctcattacatatat 29458332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 33074360 - 33074407
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  33074360 tatttttactataataaccttatttatttaatatctcattacatatat 33074407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 24135 - 24193
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||  |||| ||||||||||| || |||||| ||||||||| |||||||||||||    
T  24135 acaataatatatacttttactataataaccttattcatttaatatttcatttcatatat 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 45145294 - 45145244
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatata 78  Q
    |||| |||||||||||  |||||||| |||||| |||||||||||||||||    
T  45145294 tatacttttactataatgatcttattcatttaacatctcatttcatatata 45145244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 51697635 - 51697693
Alignment:
Q  20 caataaactata-tttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||||||||||  | |||||| |||||||||||||||||||||||    
T  51697635 caataagctatactttttactataatgaccttattcatttaatatctcatttcatatat 51697693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 6902452 - 6902395
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||| |||||||||||||    
T  6902452 caataagctataattttactataatgaccttatttatttaatatttcatttcatatat 6902395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 27992414 - 27992357
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||| |||||||||||||    
T  27992414 caataagctatacttttactataatgaccttattcatttaatatttcatttcatatat 27992357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 29651842 - 29651785
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |  ||||| |||||||||||||||||||||||    
T  29651842 caataagctatacttttactataatgactttattcatttaatatctcatttcatatat 29651785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 34266520 - 34266569
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  34266520 tatacttttactataatgaccttattcatttaatatctcatttcatatat 34266569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 41351274 - 41351323
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| || |||||| ||||||||| |||||||||||||    
T  41351274 tatacttttactataataaccttattcatttaatatttcatttcatatat 41351323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 44544098 - 44544155
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatata 76  Q
    |||||||  |||| ||||||||||| || ||| || ||||||||||||||||||||||    
T  44544098 acaataagttatacttttactataataacctttttcatttaatatctcatttcatata 44544155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 45101430 - 45101487
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||| ||||||  | |||||| |||||||||||||||||||||||    
T  45101430 caataagctatacttttcctataatgaccttattcatttaatatctcatttcatatat 45101487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 52663616 - 52663559
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||| ||||||  | |||||| |||||||||||||||||||||||    
T  52663616 caataagctatacttttgctataatgaccttattcatttaatatctcatttcatatat 52663559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 53282145 - 53282096
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||| | ||||| | ||||||||||| |||||||||||    
T  53282145 tatatttttactataatagtcttagtcatttaatatcttatttcatatat 53282096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 54898158 - 54898215
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||| |||||  | |||||| |||||||||||||||||||||||    
T  54898158 caataagctatacttttattataatgaccttattcatttaatatctcatttcatatat 54898215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 32853445 - 32853485
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcat 73  Q
    |||||||||||| | |||||||||||||||| |||||||||    
T  32853445 ttttactataacgaccttattaatttaatatttcatttcat 32853485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 43775475 - 43775519
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  43775475 ttttactataatgaccttattcatttaatatctcatttcatatat 43775519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 49123684 - 49123640
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  49123684 ttttactataatgaccttattcatttaatatctcatttcatatat 49123640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 55141561 - 55141605
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || |||||| |||||||||||||||| ||||||    
T  55141561 ttttactataataaccttattcatttaatatctcattttatatat 55141605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 8265123 - 8265068
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatat 75  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| |||||    
T  8265123 caataaactatatttttactataataaccttattaatttaatatctcattacatat 8265068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 17896592 - 17896649
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  17896592 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 17896649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 18470481 - 18470424
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||| | |||||| |||||||||||||||||||||||    
T  18470481 caataagctatacttttactataacgaccttattcatttaatatctcatttcatatat 18470424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 20035222 - 20035165
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  20035222 caataagctatacttttactataatgatcttattcatttaatatctcatttcatatat 20035165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 20045633 - 20045576
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  20045633 caataagctatacttttactataatgatcttattcatttaatatctcatttcatatat 20045576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 31430733 - 31430676
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  31430733 caataagctatacttttactataataaccttattcatttaatatctcatttcatatat 31430676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 32528397 - 32528454
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  32528397 caataagctatacttttactataatgatcttattcatttaatatctcatttcatatat 32528454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 33921843 - 33921900
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| ||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  33921843 caataaattatatttttactataatgaccttattcatttaatatctcatttcatatat 33921900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 44480211 - 44480268
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  44480211 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 44480268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 12838146 - 12838204
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| |||||  |||||||||| || |||||| |||||||||||||||||||||||    
T  12838146 acaataagctatacctttactataataaccttatttatttaatatctcatttcatatat 12838204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 7477275 - 7477324
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | ||||||||||||||||||||||||||||||    
T  7477275 tatacttttactataatgaccttattaatttaatatctcatttcatatat 7477324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 26632249 - 26632306
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  26632249 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 26632306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 32966118 - 32966175
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  32966118 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 32966175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 36922413 - 36922356
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||| ||||||||||||  | |||||| |||||||||||||||||||||||    
T  36922413 caataagctatgtttttactataatgaccttattcatttaatatctcatttcatatat 36922356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 41889399 - 41889443
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||    
T  41889399 ttttactataatagtcttattcatttaatatctcatttcatatat 41889443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 47459819 - 47459760
Alignment:
Q  18 aacaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||  |||||||||||||||| || |||||| ||||||||| |||||| ||||||    
T  47459819 aacaataatatatatttttactataataaccttatttatttaatatttcatttgatatat 47459760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 47408288 - 47408230
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||  |||| ||||||||||| || |||||| ||||||||| |||||||||||||    
T  47408288 acaataatatatacttttactataataaccttattcatttaatatttcatttcatatat 47408230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 7312783 - 7312734
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  7312783 tatacttttactataatgaccttatttatttaatatctcatttcatatat 7312734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 8381992 - 8381943
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  8381992 tatacttttactataatgaccttattcatttaatatctcatttcatatat 8381943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 33099912 - 33099961
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  33099912 tatacttttactataatgaccttattcatttaatatctcatttcatatat 33099961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 31399002 - 31399057
Alignment:
Q  21 aataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| |||||||||||  | |||||| |||| ||||||||||||||||||    
T  31399002 aataaactatacttttactataatgaccttattcattt-atatctcatttcatatat 31399057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 33258042 - 33257998
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || |||||| |||||||||||||||| ||||||    
T  33258042 ttttactataataaccttattcatttaatatctcattttatatat 33257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 35112594 - 35112546
Alignment:
Q  29 atatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||| ||  ||||| |||||||||||||||| ||||||    
T  35112594 atatttttactataataactttatttatttaatatctcattttatatat 35112546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 77262 - 77205
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  77262 caataaactatacttttactataataaccttattcatttaatatctcatttcatatat 77205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 373897 - 373840
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  373897 caataaactatacttttactataatgatcttattcatttaatatctcatttcatatat 373840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 1252339 - 1252283
Alignment:
Q  21 aataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||||||||||  | |||||| ||||||||||| |||||||||||    
T  1252339 aataaactatatttttactataatgaccttattcatttaatatcttatttcatatat 1252283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 3850487 - 3850436
Alignment:
Q  27 ctatatttttactataacaatcttattaatttaatatctcatttcatatata 78  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||||||    
T  3850487 ctatatttttactataatgaccttattcatttaatatctcatttcatatata 3850436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 7235615 - 7235557
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| | |||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  7235615 acaatacaatatacttttactataataaccttattcatttaatatctcatttcatatat 7235557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 1924018 - 1923969
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||||| | ||||| |||||||||||||||||||||||    
T  1924018 tatacttttactataacagtattattcatttaatatctcatttcatatat 1923969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 30388895 - 30388838
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |||||||| ||||||||||| |||||||||||    
T  30388895 caataagctatacttttactataatgatcttattcatttaatatcttatttcatatat 30388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 32359507 - 32359564
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |||||||| ||| |||||||||||||||||||    
T  32359507 caataagctatacttttactataatgatcttattcattaaatatctcatttcatatat 32359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 30237139 - 30237095
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||    
T  30237139 ttttactataataaccttattaatttaatatctcattttatatat 30237095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 17601217 - 17601264
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  17601217 tatttttactataataaccttatttatttaatatctcattacatatat 17601264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 23777471 - 23777413
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||  |||| ||||||||||| || |||||| ||||||||| |||||||||||||    
T  23777471 acaataatatatacttttactataataaccttattcatttaatatttcatttcatatat 23777413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 26485751 - 26485809
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||  |||| ||||||||||| || |||||| ||||||||| |||||||||||||    
T  26485751 acaataatatatacttttactataataaccttattcatttaatatttcatttcatatat 26485809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 12732349 - 12732292
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  || ||||| ||||||||| |||||||||||||    
T  12732349 caataagctatacttttactataatgatattattcatttaatatttcatttcatatat 12732292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 17124060 - 17124109
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  17124060 tatacttttactataatgaccttattcatttaatatctcatttcatatat 17124109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 17193319 - 17193274
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatata 78  Q
    |||||||||||  | |||||| ||||||||||||||||||||||||    
T  17193319 ttttactataatgaccttattcatttaatatctcatttcatatata 17193274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 17836067 - 17836010
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||| |||||||||||||    
T  17836067 caataagctatacttttactataatgaccttattcatttaatatatcatttcatatat 17836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 24663553 - 24663496
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |  ||||| |||||||||||||||||||||||    
T  24663553 caataagctatacttttactataatgacattattcatttaatatctcatttcatatat 24663496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 34607264 - 34607215
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| |||||||||  |||||||||| |||||||||||    
T  34607264 tatacttttactataataatcttattcgtttaatatctaatttcatatat 34607215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 34730726 - 34730677
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||| || |||||| ||| ||||||| |||||||||||    
T  34730726 tatatttttactataataaccttattcattcaatatctaatttcatatat 34730677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 9838202 - 9838246
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| |  |||||| |||||||||||||||||||||||    
T  9838202 ttttactataatagccttattcatttaatatctcatttcatatat 9838246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 23923781 - 23923837
Alignment:
Q  21 aataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||| ||||| |||||||||||  | |||||| | |||||||||||||||||||||    
T  23923781 aataagctatacttttactataatgaccttattcagttaatatctcatttcatatat 23923837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 1087996 - 1088053
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  1087996 caataaactatatttttactataacgactttattcatttaatatctcatttcatatat 1088053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 25344116 - 25344059
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||||||||||||||| || |||||| |||||||||||||||||||||||    
T  25344116 caataagctatatttttactataataaccttattcatttaatatctcatttcatatat 25344059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 4175542 - 4175600
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| ||||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  4175542 acaataagctatacttttactataataaccttattcatttaatatctcatttcatatat 4175600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 34261469 - 34261411
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  34261469 acaataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 34261411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 7579731 - 7579788
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  7579731 caataaactatacttttactataatgaccttattcatttaatatctcatttcatatat 7579788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 8825213 - 8825156
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  8825213 caataaactatacttttactataatgaccttattcatttaatatctcatttcatatat 8825156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 39073200 - 39073143
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  39073200 caataagctatacttttactataataaccttattcatttaatatctcatttcatatat 39073143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 37303180 - 37303227
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||    
T  37303180 tatttttactataatgatcttattcatttaatatctcatttcatatat 37303227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 7408488 - 7408430
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||  |||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  7408488 acaataatttatacttttactataataaccttattcatttaatatctcatttcatatat 7408430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 1297801 - 1297858
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  1297801 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 1297858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 5119326 - 5119277
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| || ||||||||||||| ||||||||||||||||    
T  5119326 tatacttttactataataaccttattaatttaacatctcatttcatatat 5119277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 7404008 - 7403951
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  7404008 caataaattatacttttactataatgaccttattcatttaatatctcatttcatatat 7403951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 9076227 - 9076170
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  9076227 caataaattatacttttactataatgaccttattcatttaatatctcatttcatatat 9076170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 22582628 - 22582571
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| || ||||||||  | |||||| |||||||||||||||||||||||    
T  22582628 caataaactatacttgtactataatgaccttattcatttaatatctcatttcatatat 22582571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 36239606 - 36239557
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||  | |||||||||||||||||| |||||||||||    
T  36239606 tatatttttactataatgaccttattaatttaatatcttatttcatatat 36239557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 38363345 - 38363288
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  |  ||||| |||||||||||||||||||||||    
T  38363345 caataaactatacttttactataatgactttattcatttaatatctcatttcatatat 38363288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 16124333 - 16124380
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||||    
T  16124333 tatttttactataatgaccttattcatttaatatctcatttcatatat 16124380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 17869376 - 17869423
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  17869376 tatttttattataataatcttatttatttaatatctcattacatatat 17869423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 3686836 - 3686790
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatata 76  Q
    |||||||||||||| || |||||| ||||||||||||||| ||||||    
T  3686836 tatttttactataataaccttatttatttaatatctcattacatata 3686790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 6330969 - 6330927
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcattt 70  Q
    |||||||||||||||| ||||||||| || |||||||||||||    
T  6330969 tatatttttactataataatcttattcatgtaatatctcattt 6330927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 6689756 - 6689698
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| ||||| |||||||||||  |||||||| |||||| ||||||||| ||||||    
T  6689756 acaataagctatacttttactataatgatcttattcatttaacatctcattttatatat 6689698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 2133977 - 2134026
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | ||||||||||||| ||||||||||||||||    
T  2133977 tatacttttactataatgaccttattaatttaacatctcatttcatatat 2134026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 2674041 - 2674098
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  || ||||| ||||||||||| |||||||||||    
T  2674041 caataagctatacttttactataatgattttattcatttaatatctaatttcatatat 2674098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 4985246 - 4985295
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||  | |||||| ||||||||||| |||||||||||    
T  4985246 tatatttttactataatgaccttattcatttaatatcttatttcatatat 4985295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 6754242 - 6754299
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||||| |||||||||||    
T  6754242 caataagctatacttttactataatgaccttattcatttaatatcttatttcatatat 6754299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 18020831 - 18020888
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||| ||||||||||||||||||    
T  18020831 caataagctatacttttactataatgaccttattcatttgatatctcatttcatatat 18020888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 18437394 - 18437443
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| || |||||| ||||| |||||||||||||||||    
T  18437394 tatacttttactataataaccttatttatttattatctcatttcatatat 18437443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 38017340 - 38017397
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||| ||||||||||||    
T  38017340 caataagctatacttttactataatgaccttattcatttaatatcacatttcatatat 38017397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 38702297 - 38702240
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||||| |||||||||||    
T  38702297 caataagctatacttttactataatgaccttatttatttaatatcttatttcatatat 38702240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 4017557 - 4017513
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || |||||| |||||| ||||||||||||||||    
T  4017557 ttttactataataaccttattcatttaacatctcatttcatatat 4017513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 12665001 - 12664957
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  12665001 ttttactataatgaccttattcatttaatatctcatttcatatat 12664957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 18794938 - 18794882
Alignment:
Q  21 aataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||| ||||| |||||||||||  | |||||| ||||||||||| |||||||||||    
T  18794938 aataagctatacttttactataatgaccttattcatttaatatcttatttcatatat 18794882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 3436134 - 3436191
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||    
T  3436134 caataaactatacttttactataataaccttattaatttaatatttcatttcatatat 3436191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 5374417 - 5374474
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  5374417 caataagctatatttttactataatgatcttattcatttaatatctcatttcatatat 5374474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 39683781 - 39683838
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  39683781 caataagctatatttttagtataacgatcttattcatttaatatctcatttcatatat 39683838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 8735566 - 8735509
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  8735566 caataagctatacttttactataatgatcttattcatttaatatctcatttcatatat 8735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 13629260 - 13629317
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  13629260 caataagctatacttttactataataaccttattcatttaatatctcatttcatatat 13629317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 38617374 - 38617431
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  38617374 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 38617431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 16464849 - 16464906
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  16464849 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 16464906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 22678376 - 22678433
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  22678376 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 22678433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 26620418 - 26620475
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||| |||||  | ||||||||||||||||||||||||||||||    
T  26620418 caataagctatacttttattataatgaccttattaatttaatatctcatttcatatat 26620475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 33755098 - 33755155
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  33755098 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 33755155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 36408900 - 36408843
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||||||| |||||||||||||||||||    
T  36408900 caataagctatacttttactataatgaccttattaattcaatatctcatttcatatat 36408843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 36423066 - 36423009
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||||||| |||||||||||||||||||    
T  36423066 caataagctatacttttactataatgaccttattaattcaatatctcatttcatatat 36423009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 39671502 - 39671445
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  39671502 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 39671445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 44013980 - 44014037
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  44013980 caataagctatacttttactataatgaccttatttatttaatatctcatttcatatat 44014037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 44069208 - 44069151
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  44069208 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 44069151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 23237805 - 23237750
Alignment:
Q  22 ataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  23237805 ataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 23237750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 8741691 - 8741748
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||| |||||  | |||||| |||||||||||||||||||||||    
T  8741691 caataagctatacttttattataatgaccttattcatttaatatctcatttcatatat 8741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 16664418 - 16664361
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||||| |||||||||||    
T  16664418 caataagctatacttttactataatgaccttattcatttaatatcttatttcatatat 16664361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 21044814 - 21044871
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||||||||| |||||||    
T  21044814 caataagctatacttttactataatgaccttatttatttaatatctcattgcatatat 21044871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 77
Target Start/End: Original strand, 26906484 - 26906513
Alignment:
Q  48 cttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||||||||||||||||    
T  26906484 cttattaatttaatatctcatttcatatat 26906513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 34925421 - 34925466
Alignment:
Q  32 tttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||| |||||| ||||||  |||||||||||||||||||||||||    
T  34925421 ttttttctataataatcttcctaatttaatatctcatttcatatat 34925466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 35232373 - 35232422
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  35232373 tatacttttactataatgaccttattcatttaatatctcatttcatatat 35232422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 55703089 - 55703040
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||| | |||||| ||||| ||||| |||||||||||    
T  55703089 tatatttttactataacgaccttattcatttattatcttatttcatatat 55703040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 354130 - 354086
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  354130 ttttactataatgaccttattcatttaatatctcatttcatatat 354086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 13435257 - 13435285
Alignment:
Q  49 ttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||||||||||||||||    
T  13435257 ttattaatttaatatctcatttcatatat 13435285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 19093233 - 19093277
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  19093233 ttttactataatgaccttattcatttaatatctcatttcatatat 19093277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 52057531 - 52057575
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| ||||||||| ||||||||| |||||| ||||||    
T  52057531 ttttactataataatcttatttatttaatatttcattttatatat 52057575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 52677225 - 52677269
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  52677225 ttttactataatgaccttattcatttaatatctcatttcatatat 52677269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 1024730 - 1024673
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  1024730 caataaactatacttttactataatgatcttattcatttaatatctcatttcatatat 1024673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 52749189 - 52749132
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||    
T  52749189 caataaactatacttttactataataatcttattcatttaatatcttatttcatatat 52749132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 12124810 - 12124761
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  12124810 tatacttttactataataatcttattcatttaatatctcatttcatatat 12124761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 13566853 - 13566796
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  13566853 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 13566796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 13507944 - 13507887
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |  |||||||||||||||||||||||||||||    
T  13507944 caataagctatacttttactataatgactttattaatttaatatctcatttcatatat 13507887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 13515132 - 13515075
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |  |||||||||||||||||||||||||||||    
T  13515132 caataagctatacttttactataatgactttattaatttaatatctcatttcatatat 13515075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 19349442 - 19349499
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  19349442 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 19349499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 29830927 - 29830870
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  29830927 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 29830870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 35483844 - 35483901
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  35483844 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 35483901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 37609364 - 37609421
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  37609364 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 37609421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 39412582 - 39412631
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||  | ||||||||||||| ||||||||||||||||    
T  39412582 tatatttttactataatgaccttattaatttaacatctcatttcatatat 39412631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 43500680 - 43500623
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  43500680 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 43500623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 45368262 - 45368205
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  45368262 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 45368205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 31487852 - 31487899
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  31487852 tatttttactataataaccttatttatttaatatctcattacatatat 31487899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 48508297 - 48508250
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  48508297 tatttttactataataaccttatttatttaatatctcattacatatat 48508250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 4100985 - 4101027
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatat 75  Q
    |||||||||||  |||||||||||||||||| |||||||||||    
T  4100985 ttttactataatgatcttattaatttaatatttcatttcatat 4101027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 18033888 - 18033946
Alignment:
Q  20 caataaactatatttt-tactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||||||| ||||||||  | |||||| |||||||||||||||||||||||    
T  18033888 caataagctatattttttactataatgaccttattcatttaatatctcatttcatatat 18033946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 51974233 - 51974291
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||  |||| ||||||||||| || |||||| ||||||||| |||||||||||||    
T  51974233 acaataatgtatacttttactataataaccttattcatttaatatttcatttcatatat 51974291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 1677372 - 1677315
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||||||||   | |||||| |||||||||||||||||||||||    
T  1677372 caataagctatacttttactatattgaccttattcatttaatatctcatttcatatat 1677315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 8464320 - 8464377
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||||| |||||||||||    
T  8464320 caataagctatacttttactataatgaccttattcatttaatatcttatttcatatat 8464377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 13699340 - 13699291
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  13699340 tatacttttactataatgaccttattcatttaatatctcatttcatatat 13699291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 19929537 - 19929586
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | ||||||||||||| ||||||||||||||||    
T  19929537 tatacttttactataatgaccttattaatttaacatctcatttcatatat 19929586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 20605687 - 20605744
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||| |||||  | |||||| |||||||||||||||||||||||    
T  20605687 caataagctatacttttattataatgaccttattcatttaatatctcatttcatatat 20605744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 28679195 - 28679138
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| |||| |||||||||||  | |||||| |||||||||||||||| ||||||    
T  28679195 caataaattatacttttactataatgaccttattcatttaatatctcatttgatatat 28679138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 30686577 - 30686528
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  30686577 tatacttttactataatgaccttattcatttaatatctcatttcatatat 30686528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 37437116 - 37437173
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||| ||||||    
T  37437116 caataagctatacttttactataatgaccttattcatttaatatctcatttaatatat 37437173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 38648631 - 38648574
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||| ||||||||||||||||||    
T  38648631 caataagctatacttttactataatgaccttattcatttgatatctcatttcatatat 38648574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 44818628 - 44818571
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||||| |||  | |||||| |||||||||||||||||||||||    
T  44818628 caataagctatagttttactgtaatgaccttattcatttaatatctcatttcatatat 44818571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 49908253 - 49908302
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||  | ||||||||||  ||||||||||||||||||    
T  49908253 tatatttttactataatgaccttattaattcgatatctcatttcatatat 49908302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 51972352 - 51972401
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  || ||||| |||||||||||||||||||||||    
T  51972352 tatacttttactataatgatattattcatttaatatctcatttcatatat 51972401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 10676063 - 10676019
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || |||||| |||||||||||||||| ||||||    
T  10676063 ttttactataataaccttatttatttaatatctcattttatatat 10676019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 35700451 - 35700495
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| |  |||||| |||||||||||||||||||||||    
T  35700451 ttttactataatagccttattcatttaatatctcatttcatatat 35700495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 46096707 - 46096663
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||| || ||||||||| |||||||||||||||| ||||||    
T  46096707 ttttactacaataatcttattcatttaatatctcattttatatat 46096663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 38186122 - 38186178
Alignment:
Q  21 aataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  38186122 aataaactatatttttactataatgaccttattcatttaatatctcatttcatatat 38186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 10263931 - 10263874
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  10263931 caataaactatacttttactataatgaccttattcatttaatatctcatttcatatat 10263874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 15183070 - 15183127
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  15183070 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 15183127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 15893649 - 15893706
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| ||||||||||| || |||||| |||||||||||||||||||||||    
T  15893649 caataagctatacttttactataataaccttattcatttaatatctcatttcatatat 15893706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 19594524 - 19594467
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  19594524 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 19594467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 34399376 - 34399319
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  34399376 caataaactatacttttactataatgaccttattcatttaatatctcatttcatatat 34399319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 36404918 - 36404967
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||||    
T  36404918 tatatttttactataataaccttattcatttaatatctcatttcatatat 36404967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 479042 - 479099
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  479042 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 479099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 3363758 - 3363701
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  3363758 caataagctatacttttactataatgaccttattgatttaatatctcatttcatatat 3363701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 14288605 - 14288548
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  14288605 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 14288548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 14308567 - 14308510
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  14308567 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 14308510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 26342754 - 26342697
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  26342754 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 26342697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 30264671 - 30264728
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| ||||||||| |||||||||||||    
T  30264671 caataaactatacttttactataatgaccttattcatttaatatttcatttcatatat 30264728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 36375747 - 36375690
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  36375747 caataagctataattttactataatgaccttattcatttaatatctcatttcatatat 36375690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 3376347 - 3376403
Alignment:
Q  21 aataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||| ||||||||||| ||||| ||  ||||| |||||||||||||||||||||||    
T  3376347 aataagctatatttttattataataacattattcatttaatatctcatttcatatat 3376403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 10812371 - 10812316
Alignment:
Q  22 ataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  10812371 ataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 10812316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 25558254 - 25558313
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatata 78  Q
    ||||||| ||| | |||||||||||  | |||||| ||||||||||||||||||||||||    
T  25558254 acaataagctagacttttactataatgaccttattcatttaatatctcatttcatatata 25558313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 2013036 - 2012978
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||  |||| ||||||||||| || |||| ||||||||||||| |||||||||||    
T  2013036 acaataatttatacttttactataataaccttagtaatttaatatcttatttcatatat 2012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 34357344 - 34357295
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||  | |||||| |||||||||||||||| ||||||    
T  34357344 tatatttttactataatgaccttattcatttaatatctcattttatatat 34357295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 4883764 - 4883720
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  4883764 ttttactataatgaccttattcatttaatatctcatttcatatat 4883720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 11560129 - 11560173
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  |||||||| ||||||||||||||| |||||||    
T  11560129 ttttactataattatcttattcatttaatatctcattgcatatat 11560173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 13000989 - 13001037
Alignment:
Q  29 atatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||| |||||| |  |||||| |||||||||||||||||||||||    
T  13000989 atatttttgctataatagccttatttatttaatatctcatttcatatat 13001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 14541492 - 14541448
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || |||||| |||||||||||||||| ||||||    
T  14541492 ttttactataataaccttattcatttaatatctcattttatatat 14541448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 36824552 - 36824508
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| |||  |||||||| |||||||||||||||||||||||    
T  36824552 ttttactgtaatgatcttatttatttaatatctcatttcatatat 36824508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 4057460 - 4057405
Alignment:
Q  22 ataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  4057460 ataagctatacttttactataatgatcttattaatttaatatctcatttcatatat 4057405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 26062881 - 26062824
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  26062881 caataagctatatttttactataatgaccttattcatttaatatctcatttcatatat 26062824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 34047025 - 34046968
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  34047025 caataaactatacttttactataatgaccttattcatttaatatctcatttcatatat 34046968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 16656874 - 16656817
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| ||||||||||| |||||||||||    
T  16656874 caataaactatacttttactataatgaacttattcatttaatatcttatttcatatat 16656817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 23430083 - 23430026
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  23430083 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 23430026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 23848622 - 23848679
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||||| |||||  | |||||| ||||||||||| |||||||||||    
T  23848622 caataaactatatttttattataatgaccttattcatttaatatcttatttcatatat 23848679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 33935126 - 33935183
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  33935126 caataagctataattttactataatgaccttattcatttaatatctcatttcatatat 33935183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 35052227 - 35052170
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  35052227 caataagctatacttttactataatgaccttatttatttaatatctcatttcatatat 35052170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 38128613 - 38128670
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  38128613 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 38128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 38482858 - 38482915
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  38482858 caataagctatacttttactataatgaccttattcatttaatatctcatttcatatat 38482915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 167556 - 167600
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||    
T  167556 ttttactataataaccttattaatttaatatctcattttatatat 167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 36058393 - 36058349
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  |||||||| |||||||||||||||||||||||    
T  36058393 ttttactataatgatcttattcatttaatatctcatttcatatat 36058349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 17074658 - 17074705
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  17074658 tatttttactataataaccttatttatttaatatctcattacatatat 17074705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 17573612 - 17573565
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  17573612 tatttttactataataaccttatttatttaatatctcattacatatat 17573565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 18842693 - 18842646
Alignment:
Q  30 tatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||| || |||||| ||||||||||||||| |||||||    
T  18842693 tatttttactataataaccttatttatttaatatctcattacatatat 18842646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 2335608 - 2335550
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| ||||| ||||||||||| | ||||| | ||||||||||| |||||||||||    
T  2335608 acaataatctatacttttactataatagtcttagtcatttaatatcttatttcatatat 2335550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 3513532 - 3513474
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| |||||  ||||||||||  | |||||| |||||||||||||||||||||||    
T  3513532 acaataagctatacatttactataatgaccttattcatttaatatctcatttcatatat 3513474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 36112006 - 36112064
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| ||||| ||||||||||| || |||| | ||||||||||| |||||||||||    
T  36112006 acaataatctatacttttactataataaccttagtcatttaatatcttatttcatatat 36112064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 14263710 - 14263661
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  | |||||| |||||||||||||||||||||||    
T  14263710 tatacttttactataatgaccttattcatttaatatctcatttcatatat 14263661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 15596510 - 15596461
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| ||||||||||| || |||||| ||||||||||| |||||||||||    
T  15596510 tatacttttactataataaccttattcatttaatatcttatttcatatat 15596461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 25703644 - 25703700
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  |||||||| ||||||||| |||||||||||||    
T  25703644 caataagctatacttttactataatgatcttattcatttaatat-tcatttcatatat 25703700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 34982003 - 34981950
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcat 73  Q
    |||||| ||||| |||||||||||  | |||||| |||||||||||||||||||    
T  34982003 caataagctatacttttactataatgaccttattcatttaatatctcatttcat 34981950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 45281444 - 45281500
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||| |||||||||||  | |||||| |||||||||| ||||||||||||    
T  45281444 caataaactatacttttactataatcaccttattcatttaatatc-catttcatatat 45281500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 10180531 - 10180487
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  10180531 ttttactataatgaccttattcatttaatatctcatttcatatat 10180487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 12342693 - 12342737
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  12342693 ttttactataatgaccttattcatttaatatctcatttcatatat 12342737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 21651825 - 21651869
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||  | |||||| |||||||||||||||||||||||    
T  21651825 ttttactataatgaccttattcatttaatatctcatttcatatat 21651869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 23855718 - 23855674
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| || |||||| |||||||||||||||| ||||||    
T  23855718 ttttactataataaccttatttatttaatatctcattttatatat 23855674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 195653 - 195710
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||    
T  195653 acaataaactatacttttactataacgatcttattcatttaatatc-catttcatatat 195710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 419572 - 419616
Alignment:
Q  33 ttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||    
T  419572 ttttactataataatcttatttatttaatatctcatttcatatat 419616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 8320 - 8271
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  8320 tatacttttactataatgatcttattcatttaatatctcatttcatatat 8271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 1883 - 1941
Alignment:
Q  19 acaataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||| ||||| ||||||||||| || |||| | ||||||||||| |||||||||||    
T  1883 acaataatctatacttttactataataaccttagtcatttaatatcttatttcatatat 1941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 4681 - 4632
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    ||||||||||||||||  | |||||| ||||||||||| |||||||||||    
T  4681 tatatttttactataatgaccttatttatttaatatcttatttcatatat 4632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 314 - 363
Alignment:
Q  28 tatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||||||||||||| || |||||| ||| ||||||| |||||||||||    
T  314 tatatttttactataataaccttattcattcaatatctaatttcatatat 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 69274 - 69217
Alignment:
Q  20 caataaactatatttttactataacaatcttattaatttaatatctcatttcatatat 77  Q
    |||||| ||||| |||||||||||  | |||||| ||||||||||| |||||||||||    
T  69274 caataagctatacttttactataatgaacttattcatttaatatcttatttcatatat 69217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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