View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19621_low_4 (Length: 453)

Name: NF19621_low_4
Description: NF19621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19621_low_4
NF19621_low_4
[»] chr5 (62 HSPs)
chr5 (19-269)||(8574093-8574345)
chr5 (270-388)||(43094596-43094715)
chr5 (273-389)||(11345945-11346061)
chr5 (270-387)||(14684-14801)
chr5 (270-389)||(7762263-7762382)
chr5 (270-389)||(7757259-7757379)
chr5 (270-380)||(43093942-43094053)
chr5 (293-388)||(35777038-35777131)
chr5 (268-388)||(31788131-31788252)
chr5 (288-388)||(34122476-34122577)
chr5 (270-388)||(13568095-13568214)
chr5 (268-382)||(2532530-2532642)
chr5 (332-388)||(8539536-8539592)
chr5 (269-389)||(42912897-42913017)
chr5 (285-387)||(1397371-1397474)
chr5 (273-342)||(31787489-31787559)
chr5 (332-389)||(3891480-3891537)
chr5 (269-385)||(30705070-30705187)
chr5 (332-388)||(11348495-11348551)
chr5 (266-389)||(41798748-41798872)
chr5 (271-389)||(34123954-34124073)
chr5 (330-388)||(18512672-18512730)
chr5 (270-387)||(25897100-25897218)
chr5 (269-389)||(39743167-39743288)
chr5 (270-389)||(25877556-25877675)
chr5 (270-389)||(28388538-28388658)
chr5 (268-315)||(21041009-21041056)
chr5 (268-355)||(27673706-27673793)
chr5 (270-388)||(27867840-27867959)
chr5 (268-382)||(38971649-38971763)
chr5 (327-389)||(5768-5830)
chr5 (270-382)||(2532020-2532130)
chr5 (270-316)||(8537149-8537195)
chr5 (285-386)||(30887382-30887484)
chr5 (330-389)||(19037489-19037549)
chr5 (300-389)||(28238103-28238193)
chr5 (330-389)||(30708897-30708957)
chr5 (332-383)||(18512228-18512279)
chr5 (326-389)||(30192483-30192546)
chr5 (269-327)||(38407132-38407190)
chr5 (300-353)||(28886449-28886502)
chr5 (330-385)||(8576967-8577023)
chr5 (326-389)||(13837714-13837778)
chr5 (326-386)||(20744015-20744075)
chr5 (300-389)||(28876607-28876697)
chr5 (329-389)||(38968089-38968149)
chr5 (270-389)||(41799786-41799906)
chr5 (268-387)||(42937124-42937244)
chr5 (329-388)||(2170575-2170634)
chr5 (357-388)||(7021878-7021909)
chr5 (357-388)||(37820874-37820905)
chr5 (326-385)||(38408490-38408549)
chr5 (332-389)||(28880318-28880376)
chr5 (270-387)||(42942472-42942590)
chr5 (332-385)||(13563664-13563717)
chr5 (269-349)||(30611172-30611253)
chr5 (328-385)||(41623071-41623128)
chr5 (328-389)||(14280919-14280981)
chr5 (357-389)||(27863451-27863483)
chr5 (332-389)||(30711178-30711236)
chr5 (332-389)||(38855730-38855788)
chr5 (270-349)||(42537135-42537215)
[»] chr2 (69 HSPs)
chr2 (270-389)||(23347347-23347466)
chr2 (268-389)||(23346713-23346834)
chr2 (268-389)||(7189970-7190091)
chr2 (270-389)||(3943211-3943330)
chr2 (270-389)||(43870140-43870260)
chr2 (270-389)||(28419342-28419461)
chr2 (270-385)||(20951069-20951184)
chr2 (293-389)||(10825175-10825272)
chr2 (270-354)||(28137791-28137876)
chr2 (274-389)||(1096533-1096649)
chr2 (268-389)||(1149404-1149526)
chr2 (270-354)||(39377635-39377720)
chr2 (297-389)||(28477086-28477178)
chr2 (270-389)||(10424774-10424893)
chr2 (269-382)||(17688219-17688330)
chr2 (269-389)||(27276393-27276514)
chr2 (332-389)||(30803037-30803094)
chr2 (332-389)||(36510875-36510932)
chr2 (301-388)||(39378337-39378422)
chr2 (330-389)||(17424126-17424186)
chr2 (268-380)||(29074031-29074143)
chr2 (269-387)||(24749619-24749738)
chr2 (269-382)||(28138314-28138425)
chr2 (270-389)||(41273267-41273386)
chr2 (298-367)||(3940900-3940969)
chr2 (270-390)||(34639332-34639453)
chr2 (269-388)||(1101072-1101192)
chr2 (330-389)||(43982193-43982253)
chr2 (270-387)||(43619163-43619281)
chr2 (270-387)||(7184990-7185107)
chr2 (332-389)||(10425838-10425895)
chr2 (332-389)||(33222613-33222670)
chr2 (328-389)||(39489176-39489237)
chr2 (270-389)||(25184849-25184968)
chr2 (297-389)||(29947729-29947821)
chr2 (269-388)||(35493361-35493481)
chr2 (332-388)||(38945759-38945815)
chr2 (270-404)||(41181371-41181504)
chr2 (270-389)||(41497406-41497526)
chr2 (270-389)||(41500253-41500373)
chr2 (332-387)||(3803564-3803619)
chr2 (273-389)||(22003420-22003537)
chr2 (269-387)||(24607589-24607708)
chr2 (332-382)||(3086033-3086083)
chr2 (293-354)||(17688812-17688874)
chr2 (332-386)||(37322133-37322187)
chr2 (273-389)||(2917620-2917737)
chr2 (332-389)||(3795334-3795391)
chr2 (270-355)||(20937832-20937917)
chr2 (285-389)||(29397859-29397964)
chr2 (328-389)||(29406965-29407026)
chr2 (270-389)||(2528607-2528723)
chr2 (330-389)||(3937871-3937931)
chr2 (329-389)||(43258752-43258812)
chr2 (328-389)||(44100817-44100879)
chr2 (358-389)||(25964834-25964865)
chr2 (326-389)||(40156390-40156453)
chr2 (332-387)||(43976849-43976904)
chr2 (329-391)||(12252499-12252561)
chr2 (329-387)||(43257744-43257802)
chr2 (319-387)||(28342506-28342575)
chr2 (326-383)||(29401630-29401687)
chr2 (326-387)||(38950548-38950609)
chr2 (328-389)||(39947592-39947653)
chr2 (326-383)||(17420558-17420616)
chr2 (328-389)||(18000224-18000286)
chr2 (330-385)||(28472107-28472163)
chr2 (328-360)||(33416122-33416154)
chr2 (328-389)||(41564511-41564573)
[»] chr4 (80 HSPs)
chr4 (270-389)||(16984180-16984300)
chr4 (270-388)||(28081393-28081511)
chr4 (269-389)||(16983455-16983576)
chr4 (269-387)||(44674098-44674216)
chr4 (270-389)||(39590587-39590707)
chr4 (268-389)||(51492004-51492125)
chr4 (269-404)||(50278803-50278938)
chr4 (271-389)||(16473699-16473817)
chr4 (270-389)||(21022907-21023026)
chr4 (270-387)||(50274694-50274812)
chr4 (268-389)||(28235580-28235701)
chr4 (268-389)||(56138179-56138306)
chr4 (269-382)||(3186090-3186203)
chr4 (328-389)||(38369201-38369262)
chr4 (270-389)||(9889928-9890048)
chr4 (270-384)||(37394182-37394297)
chr4 (293-385)||(39588049-39588142)
chr4 (332-389)||(40833629-40833686)
chr4 (270-388)||(1041869-1041988)
chr4 (271-389)||(56565693-56565811)
chr4 (268-388)||(1044539-1044660)
chr4 (332-389)||(14200558-14200615)
chr4 (328-389)||(23220671-23220732)
chr4 (332-389)||(46254467-46254524)
chr4 (293-389)||(49889640-49889737)
chr4 (332-389)||(51037487-51037544)
chr4 (328-388)||(3403840-3403900)
chr4 (329-385)||(34530792-34530848)
chr4 (268-389)||(37563299-37563421)
chr4 (270-382)||(51494875-51494987)
chr4 (330-389)||(55793914-55793974)
chr4 (276-355)||(56140685-56140765)
chr4 (326-389)||(18884523-18884586)
chr4 (330-385)||(40354599-40354654)
chr4 (330-389)||(50447003-50447062)
chr4 (270-385)||(56304811-56304926)
chr4 (270-387)||(4979938-4980056)
chr4 (270-387)||(31242150-31242268)
chr4 (285-389)||(37395210-37395316)
chr4 (270-389)||(52529147-52529267)
chr4 (270-389)||(54634034-54634154)
chr4 (273-382)||(3183919-3184028)
chr4 (270-390)||(6280791-6280912)
chr4 (332-385)||(28084013-28084066)
chr4 (330-389)||(6178129-6178189)
chr4 (326-386)||(7485683-7485743)
chr4 (273-388)||(21472504-21472620)
chr4 (330-389)||(41795375-41795435)
chr4 (330-389)||(49094078-49094138)
chr4 (270-388)||(26792264-26792383)
chr4 (268-349)||(37015863-37015945)
chr4 (300-389)||(54633776-54633866)
chr4 (332-389)||(15995719-15995776)
chr4 (332-389)||(19069184-19069241)
chr4 (332-389)||(20208507-20208564)
chr4 (269-314)||(37880597-37880642)
chr4 (326-387)||(40061182-40061243)
chr4 (326-387)||(1087850-1087912)
chr4 (300-389)||(1089603-1089693)
chr4 (330-389)||(21018023-21018083)
chr4 (300-389)||(40358299-40358389)
chr4 (358-389)||(48256587-48256618)
chr4 (302-365)||(49892418-49892481)
chr4 (326-389)||(51036494-51036557)
chr4 (357-387)||(19073676-19073706)
chr4 (332-389)||(35631163-35631217)
chr4 (326-389)||(37563055-37563119)
chr4 (332-386)||(37855856-37855910)
chr4 (358-388)||(55407813-55407843)
chr4 (332-389)||(15999818-15999875)
chr4 (332-389)||(21015736-21015793)
chr4 (328-389)||(43176647-43176708)
chr4 (331-388)||(48806481-48806538)
chr4 (300-386)||(49169119-49169206)
chr4 (270-314)||(37880661-37880705)
chr4 (300-389)||(39773368-39773458)
chr4 (328-389)||(49563832-49563894)
chr4 (326-382)||(50196936-50196992)
chr4 (332-392)||(50905150-50905210)
chr4 (326-389)||(53535983-53536043)
[»] chr1 (89 HSPs)
chr1 (270-389)||(94344-94463)
chr1 (268-385)||(49426646-49426763)
chr1 (270-389)||(46886406-46886526)
chr1 (293-389)||(51271610-51271707)
chr1 (270-389)||(29765548-29765668)
chr1 (268-379)||(44596793-44596905)
chr1 (268-388)||(32161315-32161433)
chr1 (270-382)||(46320482-46320592)
chr1 (297-389)||(44598925-44599018)
chr1 (270-387)||(6562182-6562300)
chr1 (269-389)||(586624-586744)
chr1 (305-385)||(2425708-2425788)
chr1 (269-389)||(22524060-22524180)
chr1 (270-389)||(18609914-18610033)
chr1 (326-389)||(19161883-19161946)
chr1 (269-387)||(51288820-51288939)
chr1 (270-404)||(52805538-52805672)
chr1 (270-382)||(26944413-26944523)
chr1 (300-389)||(19914431-19914520)
chr1 (328-389)||(30194414-30194475)
chr1 (270-389)||(29438039-29438159)
chr1 (379-447)||(50269054-50269122)
chr1 (270-382)||(20114539-20114649)
chr1 (270-382)||(32160666-32160776)
chr1 (270-354)||(253028-253113)
chr1 (270-389)||(9711670-9711790)
chr1 (270-388)||(27484993-27485112)
chr1 (270-384)||(30905705-30905820)
chr1 (265-382)||(33206032-33206147)
chr1 (270-388)||(44465530-44465649)
chr1 (294-382)||(253306-253392)
chr1 (270-387)||(23913791-23913909)
chr1 (330-388)||(49429155-49429213)
chr1 (336-389)||(4883234-4883287)
chr1 (266-354)||(46319680-46319769)
chr1 (329-382)||(48228328-48228381)
chr1 (330-389)||(13636141-13636201)
chr1 (332-388)||(20349454-20349510)
chr1 (270-389)||(23276127-23276247)
chr1 (273-389)||(36076577-36076693)
chr1 (322-389)||(52802116-52802184)
chr1 (271-382)||(97949-98060)
chr1 (270-404)||(21144610-21144743)
chr1 (270-387)||(49924790-49924908)
chr1 (265-327)||(50117895-50117957)
chr1 (269-389)||(11183119-11183240)
chr1 (273-389)||(41804052-41804169)
chr1 (270-389)||(44336187-44336303)
chr1 (332-389)||(44470030-44470087)
chr1 (270-349)||(471122-471202)
chr1 (300-389)||(8548688-8548778)
chr1 (270-326)||(15354641-15354697)
chr1 (330-389)||(19159617-19159677)
chr1 (300-355)||(2365199-2365254)
chr1 (326-389)||(29424371-29424434)
chr1 (332-386)||(15047279-15047333)
chr1 (328-385)||(22397812-22397870)
chr1 (270-328)||(27487717-27487775)
chr1 (347-389)||(49661752-49661794)
chr1 (297-389)||(15051367-15051460)
chr1 (332-389)||(30910022-30910079)
chr1 (332-388)||(6557912-6557968)
chr1 (269-388)||(8460117-8460236)
chr1 (357-389)||(9710600-9710632)
chr1 (269-389)||(21699818-21699938)
chr1 (300-389)||(29622443-29622533)
chr1 (273-384)||(36908515-36908627)
chr1 (332-388)||(41453835-41453891)
chr1 (358-404)||(19495089-19495133)
chr1 (362-404)||(22346023-22346063)
chr1 (362-392)||(4518405-4518435)
chr1 (300-354)||(8473747-8473801)
chr1 (361-391)||(16281750-16281780)
chr1 (326-387)||(26607456-26607514)
chr1 (326-389)||(26879314-26879378)
chr1 (332-382)||(50343994-50344044)
chr1 (270-382)||(22345195-22345307)
chr1 (332-389)||(23359368-23359425)
chr1 (306-390)||(46141752-46141837)
chr1 (273-389)||(46973141-46973258)
chr1 (332-389)||(51289979-51290036)
chr1 (300-389)||(3728699-3728789)
chr1 (328-389)||(3943966-3944028)
chr1 (326-389)||(15696753-15696813)
chr1 (326-389)||(26875683-26875747)
chr1 (357-389)||(29352281-29352313)
chr1 (328-389)||(38771621-38771683)
chr1 (306-389)||(49927532-49927616)
chr1 (273-392)||(51666655-51666774)
[»] chr6 (44 HSPs)
chr6 (270-390)||(14012393-14012513)
chr6 (270-387)||(3502659-3502776)
chr6 (293-389)||(29076342-29076439)
chr6 (293-389)||(29109875-29109972)
chr6 (293-389)||(29111315-29111412)
chr6 (270-382)||(11687393-11687503)
chr6 (329-389)||(15888819-15888879)
chr6 (270-385)||(3501086-3501201)
chr6 (269-389)||(28362750-28362874)
chr6 (270-354)||(11687946-11688031)
chr6 (269-389)||(11840269-11840390)
chr6 (305-403)||(31151044-31151142)
chr6 (270-387)||(7361125-7361243)
chr6 (332-389)||(2109514-2109571)
chr6 (270-389)||(31768687-31768807)
chr6 (270-389)||(6760891-6761010)
chr6 (269-389)||(2050962-2051082)
chr6 (332-389)||(25554702-25554759)
chr6 (330-389)||(22305102-22305162)
chr6 (269-332)||(117911-117974)
chr6 (326-389)||(9048066-9048129)
chr6 (270-389)||(26349910-26350028)
chr6 (330-389)||(6204821-6204881)
chr6 (270-385)||(29061230-29061346)
chr6 (270-377)||(29065674-29065782)
chr6 (270-377)||(29074687-29074795)
chr6 (270-377)||(29079451-29079559)
chr6 (270-377)||(29107260-29107368)
chr6 (326-389)||(9049103-9049166)
chr6 (293-391)||(18610223-18610321)
chr6 (305-389)||(29097847-29097932)
chr6 (326-389)||(117252-117312)
chr6 (330-389)||(11691788-11691848)
chr6 (332-388)||(18347038-18347094)
chr6 (270-314)||(26422915-26422959)
chr6 (270-389)||(26351115-26351234)
chr6 (335-390)||(31146373-31146428)
chr6 (357-388)||(31771761-31771792)
chr6 (270-382)||(32691085-32691198)
chr6 (326-389)||(26712038-26712102)
chr6 (326-389)||(27616705-27616769)
chr6 (297-354)||(30829706-30829763)
chr6 (271-311)||(17594250-17594290)
chr6 (328-389)||(26712242-26712304)
[»] chr8 (73 HSPs)
chr8 (270-389)||(22550884-22551003)
chr8 (270-389)||(39601638-39601758)
chr8 (269-389)||(41250091-41250211)
chr8 (270-388)||(34235143-34235261)
chr8 (270-389)||(34366846-34366965)
chr8 (268-389)||(10749693-10749814)
chr8 (268-389)||(39939234-39939356)
chr8 (304-389)||(546440-546525)
chr8 (300-389)||(2335167-2335256)
chr8 (270-349)||(545869-545948)
chr8 (270-389)||(28617503-28617622)
chr8 (270-389)||(45409806-45409925)
chr8 (270-382)||(7577617-7577727)
chr8 (268-326)||(34234515-34234573)
chr8 (332-389)||(27501597-27501654)
chr8 (326-385)||(22547460-22547519)
chr8 (269-382)||(27704559-27704670)
chr8 (326-389)||(44933850-44933913)
chr8 (268-389)||(43262357-43262475)
chr8 (269-389)||(44052245-44052366)
chr8 (269-389)||(5533044-5533164)
chr8 (269-387)||(1114676-1114795)
chr8 (326-389)||(41016405-41016468)
chr8 (270-382)||(7577050-7577160)
chr8 (270-382)||(27703995-27704105)
chr8 (268-382)||(34371872-34371986)
chr8 (269-386)||(45454339-45454457)
chr8 (273-389)||(20549251-20549368)
chr8 (332-389)||(28694075-28694132)
chr8 (336-389)||(38604267-38604320)
chr8 (270-389)||(35962241-35962361)
chr8 (270-389)||(39751008-39751127)
chr8 (270-404)||(41743824-41743958)
chr8 (270-389)||(184571-184691)
chr8 (270-389)||(36677948-36678068)
chr8 (270-389)||(39408-39537)
chr8 (271-387)||(31957769-31957886)
chr8 (332-389)||(32584049-32584106)
chr8 (270-386)||(41858143-41858260)
chr8 (332-389)||(43363279-43363336)
chr8 (270-389)||(3641580-3641700)
chr8 (268-389)||(15030816-15030938)
chr8 (300-389)||(22014210-22014300)
chr8 (300-389)||(22014454-22014544)
chr8 (269-389)||(45066380-45066501)
chr8 (268-345)||(5300679-5300757)
chr8 (335-389)||(44841893-44841947)
chr8 (269-314)||(28694513-28694558)
chr8 (270-342)||(41274559-41274632)
chr8 (270-349)||(20546787-20546867)
chr8 (269-377)||(20854551-20854659)
chr8 (332-388)||(36127369-36127425)
chr8 (329-389)||(40740900-40740960)
chr8 (330-384)||(486074-486129)
chr8 (269-375)||(35966782-35966889)
chr8 (332-386)||(3085538-3085592)
chr8 (268-389)||(7168020-7168142)
chr8 (331-389)||(13783127-13783185)
chr8 (293-331)||(39604397-39604435)
chr8 (268-330)||(40077329-40077391)
chr8 (332-389)||(1116207-1116264)
chr8 (269-349)||(18441500-18441581)
chr8 (328-389)||(31745175-31745236)
chr8 (336-389)||(38872949-38873002)
chr8 (326-387)||(39252042-39252103)
chr8 (332-389)||(42602457-42602514)
chr8 (326-389)||(3695361-3695421)
chr8 (328-389)||(7344576-7344638)
chr8 (306-389)||(18205756-18205840)
chr8 (326-389)||(30026253-30026313)
chr8 (269-377)||(39831090-39831198)
chr8 (310-389)||(41855342-41855422)
chr8 (329-389)||(44727524-44727583)
[»] chr7 (54 HSPs)
chr7 (270-389)||(46738736-46738856)
chr7 (285-385)||(34139846-34139947)
chr7 (270-388)||(40323654-40323770)
chr7 (270-389)||(17834422-17834541)
chr7 (269-382)||(36185585-36185696)
chr7 (300-389)||(7034-7123)
chr7 (270-387)||(27656973-27657090)
chr7 (269-389)||(12210609-12210729)
chr7 (270-354)||(36185124-36185208)
chr7 (270-382)||(46740520-46740632)
chr7 (326-389)||(8066-8129)
chr7 (332-389)||(17840909-17840966)
chr7 (330-389)||(17838645-17838704)
chr7 (270-389)||(10098136-10098256)
chr7 (270-387)||(29593349-29593467)
chr7 (268-389)||(42499341-42499463)
chr7 (270-388)||(45258024-45258142)
chr7 (332-389)||(46908492-46908549)
chr7 (268-380)||(13921292-13921404)
chr7 (285-389)||(34742414-34742519)
chr7 (332-389)||(42583079-42583136)
chr7 (270-331)||(43686926-43686987)
chr7 (269-330)||(48829896-48829957)
chr7 (332-388)||(618745-618801)
chr7 (273-392)||(36186489-36186608)
chr7 (270-387)||(34623401-34623519)
chr7 (326-389)||(603769-603833)
chr7 (270-404)||(5537800-5537940)
chr7 (268-389)||(7975628-7975750)
chr7 (270-351)||(40323202-40323284)
chr7 (271-377)||(45256923-45257029)
chr7 (273-314)||(31513077-31513118)
chr7 (297-354)||(41880475-41880532)
chr7 (330-389)||(9367743-9367803)
chr7 (300-389)||(10097880-10097970)
chr7 (269-389)||(10524376-10524496)
chr7 (326-385)||(19804512-19804571)
chr7 (329-389)||(38555432-38555492)
chr7 (300-389)||(41884145-41884235)
chr7 (270-330)||(48194652-48194712)
chr7 (269-389)||(48314607-48314727)
chr7 (332-387)||(27453615-27453670)
chr7 (300-389)||(15074247-15074337)
chr7 (330-387)||(20564193-20564251)
chr7 (332-389)||(9494825-9494882)
chr7 (270-382)||(28980199-28980312)
chr7 (336-389)||(30846814-30846867)
chr7 (285-330)||(40587623-40587668)
chr7 (269-330)||(47741713-47741774)
chr7 (333-389)||(13644419-13644475)
chr7 (270-330)||(41623894-41623954)
chr7 (328-389)||(45767880-45767942)
chr7 (268-379)||(46863373-46863485)
chr7 (326-389)||(47750518-47750578)
[»] chr3 (97 HSPs)
chr3 (259-389)||(46989470-46989601)
chr3 (269-389)||(43478849-43478970)
chr3 (270-389)||(43476125-43476246)
chr3 (293-389)||(55385094-55385191)
chr3 (268-391)||(41137650-41137774)
chr3 (270-389)||(4002524-4002643)
chr3 (279-389)||(48246355-48246466)
chr3 (270-387)||(16647168-16647286)
chr3 (305-389)||(600563-600648)
chr3 (297-389)||(16484475-16484568)
chr3 (270-389)||(8475761-8475880)
chr3 (263-389)||(42165091-42165217)
chr3 (270-383)||(50216879-50216993)
chr3 (270-389)||(4015148-4015267)
chr3 (270-344)||(46993235-46993310)
chr3 (328-389)||(27739586-27739647)
chr3 (293-376)||(33304995-33305076)
chr3 (270-388)||(5138290-5138406)
chr3 (269-389)||(19988393-19988513)
chr3 (270-389)||(48250888-48251008)
chr3 (270-389)||(4331839-4331958)
chr3 (330-389)||(36134318-36134377)
chr3 (326-387)||(24703436-24703497)
chr3 (332-389)||(34543155-34543212)
chr3 (270-389)||(36812770-36812891)
chr3 (268-389)||(42166429-42166550)
chr3 (270-390)||(47070402-47070523)
chr3 (269-389)||(49219810-49219931)
chr3 (300-389)||(50998699-50998788)
chr3 (326-382)||(16611091-16611147)
chr3 (326-382)||(22048106-22048162)
chr3 (330-389)||(4004822-4004881)
chr3 (330-384)||(2271337-2271391)
chr3 (326-388)||(4002731-4002793)
chr3 (335-389)||(12897824-12897878)
chr3 (328-389)||(2062379-2062440)
chr3 (328-389)||(11249543-11249604)
chr3 (328-389)||(14043917-14043978)
chr3 (305-389)||(19341613-19341698)
chr3 (332-389)||(28817020-28817077)
chr3 (270-355)||(32200245-32200330)
chr3 (330-389)||(2647718-2647778)
chr3 (270-388)||(5136520-5136636)
chr3 (270-389)||(14402989-14403109)
chr3 (332-387)||(596781-596836)
chr3 (297-389)||(3501914-3502007)
chr3 (270-389)||(1835084-1835204)
chr3 (270-383)||(23443131-23443245)
chr3 (308-389)||(41802970-41803052)
chr3 (332-389)||(2743395-2743452)
chr3 (285-389)||(7841070-7841175)
chr3 (332-389)||(13743290-13743347)
chr3 (300-389)||(35743601-35743689)
chr3 (332-384)||(19750039-19750091)
chr3 (270-382)||(52387719-52387831)
chr3 (330-389)||(54389789-54389849)
chr3 (268-385)||(11380373-11380491)
chr3 (270-354)||(44687505-44687588)
chr3 (279-383)||(66844-66948)
chr3 (270-315)||(2275009-2275054)
chr3 (328-389)||(7941103-7941164)
chr3 (332-389)||(10492024-10492081)
chr3 (332-389)||(13747737-13747794)
chr3 (269-314)||(36127336-36127381)
chr3 (269-389)||(42756092-42756213)
chr3 (329-389)||(11094106-11094165)
chr3 (302-388)||(13742715-13742799)
chr3 (270-353)||(13743160-13743244)
chr3 (330-389)||(34049074-34049134)
chr3 (330-385)||(46402376-46402432)
chr3 (300-389)||(46697675-46697765)
chr3 (357-389)||(50957685-50957717)
chr3 (297-389)||(1835346-1835439)
chr3 (326-389)||(2267021-2267084)
chr3 (326-389)||(19842495-19842558)
chr3 (322-389)||(29918360-29918427)
chr3 (322-389)||(29967513-29967580)
chr3 (334-385)||(31951253-31951304)
chr3 (358-389)||(49140866-49140897)
chr3 (271-385)||(16861065-16861179)
chr3 (300-354)||(29008850-29008904)
chr3 (326-389)||(41844139-41844203)
chr3 (358-388)||(48888763-48888793)
chr3 (326-389)||(49144475-49144539)
chr3 (357-387)||(50953324-50953354)
chr3 (297-387)||(9426592-9426683)
chr3 (336-385)||(17561760-17561809)
chr3 (332-389)||(19440253-19440310)
chr3 (332-404)||(21951823-21951893)
chr3 (362-391)||(28611117-28611146)
chr3 (326-382)||(42900167-42900224)
chr3 (284-389)||(52570585-52570690)
chr3 (332-389)||(2645452-2645510)
chr3 (328-389)||(3953234-3953296)
chr3 (270-330)||(6489267-6489327)
chr3 (358-390)||(49268863-49268895)
chr3 (270-330)||(51696594-51696654)
[»] scaffold0176 (1 HSPs)
scaffold0176 (285-385)||(771-872)
[»] scaffold0341 (1 HSPs)
scaffold0341 (270-387)||(17372-17490)
[»] scaffold0116 (2 HSPs)
scaffold0116 (268-389)||(15974-16096)
scaffold0116 (270-387)||(11235-11353)
[»] scaffold0184 (2 HSPs)
scaffold0184 (268-383)||(17963-18079)
scaffold0184 (293-389)||(18312-18409)
[»] scaffold0078 (2 HSPs)
scaffold0078 (268-383)||(54765-54881)
scaffold0078 (293-389)||(54435-54532)
[»] scaffold0199 (2 HSPs)
scaffold0199 (330-389)||(12407-12466)
scaffold0199 (270-389)||(10587-10706)
[»] scaffold1379 (1 HSPs)
scaffold1379 (270-389)||(453-573)
[»] scaffold0180 (1 HSPs)
scaffold0180 (270-389)||(15641-15760)
[»] scaffold0494 (3 HSPs)
scaffold0494 (268-389)||(763-885)
scaffold0494 (270-355)||(11507-11592)
scaffold0494 (332-389)||(5327-5385)
[»] scaffold0201 (1 HSPs)
scaffold0201 (268-388)||(22335-22456)
[»] scaffold0011 (1 HSPs)
scaffold0011 (272-389)||(236279-236396)
[»] scaffold0260 (1 HSPs)
scaffold0260 (332-388)||(11777-11833)
[»] scaffold0504 (1 HSPs)
scaffold0504 (271-389)||(12318-12436)
[»] scaffold0361 (1 HSPs)
scaffold0361 (270-387)||(4421-4539)
[»] scaffold0340 (1 HSPs)
scaffold0340 (270-389)||(1200-1319)
[»] scaffold0101 (1 HSPs)
scaffold0101 (330-389)||(36553-36613)
[»] scaffold0016 (1 HSPs)
scaffold0016 (263-389)||(69240-69366)
[»] scaffold0206 (1 HSPs)
scaffold0206 (270-317)||(13299-13346)
[»] scaffold0268 (1 HSPs)
scaffold0268 (332-380)||(15441-15489)
[»] scaffold0092 (1 HSPs)
scaffold0092 (362-390)||(54592-54620)


Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 19 - 269
Target Start/End: Original strand, 8574093 - 8574345
Alignment:
Q  19 ctcactaccttcaatctctcaccattccaccaccatcatcatcaaatgtatttccgtactcaacgcatcattgtcggccacaggtttggatttgaatggg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8574093 ctcactaccttcaatctctcaccattccaccaccatcatcatcaaatgtatttccgtactcaacgcatcattgtcggccacaggtttggatttgaatggg 8574192  T
Q  119 gcggtggagttgcagtggttgggttagaaggtttggagaagatagtgaaatatttgatagttataagtgttctgatct--ccccctctctctccctcatg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  8574193 gcggtggagttgcagtggttgggttagaaggtttggagaagatagtgaaatatttgatagttataagtgttctgatctccccccctctctctccctcatg 8574292  T
Q  217 ttgcagattttttattattttaccttttgtttctagtccgtttaataaatcta 269  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8574293 ttgcagattttttattattttaccttttgtctctagtccgtttaataaatcta 8574345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 43094715 - 43094596
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| ||| ||||||||| |||||||||| ||||||||||||    
T  43094715 gagaattgctgtttacacatttgataaggttatgccacacgagtaaatgacgtttttaccccatcgacagttaactgccgaagttttagaaatccggctg 43094616  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||    
T  43094615 cagttaactgccgaggaaaa 43094596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 273 - 389
Target Start/End: Original strand, 11345945 - 11346061
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagt 372  Q
    ||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||| || | ||||||||| |||||||||| ||||||| ||||||||    
T  11345945 aattgttgtttacgcatttgataaggctgtgccacacaagtaaatgacgtttttgccttttgacagttaactgccgaagttttagaaatccagctgcagt 11346044  T
Q  373 taactgccgaggaaaac 389  Q
    |||||||||||||||||    
T  11346045 taactgccgaggaaaac 11346061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 14801 - 14684
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||     || |||||||||||||||| |||||||||| ||||| ||||||     
T  14801 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaattactcaaatgtccttcggcagttaactgccgaagttttagaaatacggctgt 14702  T
Q  370 agttaactgccgaggaaa 387  Q
    ||||||||||||||||||    
T  14701 agttaactgccgaggaaa 14684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 7762382 - 7762263
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||  ||||||  |||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||| ||| |||    
T  7762382 gagaattgctgttcccacattacataaggctgtgccacacgagtaattgacgtttttgcccctcggcagttaactgccgaagttttagaaattcggttgc 7762283  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||| ||||||||||    
T  7762282 agttaactgtcgaggaaaac 7762263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 7757259 - 7757379
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||||  |||||  | |||||||||||||||||||||||||||||  ||| ||||||||| |||||||||| ||||||||||||    
T  7757259 gagaattgctgttcccacattacataagactatgccacacgagtaaatgacgtttttgccccctcgacagttaactgccgaagttttagaaatccggctg 7757358  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  7757359 cagttaactgccgaggaaaac 7757379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 380
Target Start/End: Original strand, 43093942 - 43094053
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||  ||||||  ||||||||| ||||| |||| ||||||||||||    
T  43093942 gagaattgttgtttacatatttgataaggctgtgtcacacgagtaaatgacgtttttaccccttcaacagttaactgccgaaattttagaaatccggctg 43094041  T
Q  369 cagttaactgcc 380  Q
    ||||||||||||    
T  43094042 cagttaactgcc 43094053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 388
Target Start/End: Complemental strand, 35777131 - 35777038
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||    
T  35777131 ataaggttgtgccacacgagtaaatgacgtttttgcctctgcggcagttaactaccgaag-tttggaa--ccggctgcagttaactgccgacgaaaa 35777038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 31788252 - 31788131
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    ||||||||||||||||||||||||||||||  ||||| | ||||||||||||| ||||| | || ||| |||||||||  ||||||||| |||||  | |    
T  31788252 tagagaattgctgtttacacatttgataagactgtgctatacgagtaaatgacatttttactccctcgacagttaactgtcgaagttttagaaattagac 31788153  T
Q  367 tgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||||    
T  31788152 tgcagttaactgccgaggaaaa 31788131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 34122476 - 34122577
Alignment:
Q  288 atttgataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaa 386  Q
    |||||||||||||||||||||  ||||||  ||| |||||||| |||||||||||||| |||| |  || ||||||||||||||||||||||||||||||    
T  34122476 atttgataaggttgtgccacattagtaaaatacgattttgccccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaa 34122575  T
Q  387 aa 388  Q
    ||    
T  34122576 aa 34122577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 13568214 - 13568095
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| ||||||| ||||||||||||||||||| |||  |||| |||||||| |||| |  || ||||||||||||    
T  13568214 gagaattgttgttcccacattacataaggctgtgccatacgagtaaatgacgtttttaccccatcggtagttaactgccgaggaatttgaaatccggctg 13568115  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||    
T  13568114 cagttaactgccgaggaaaa 13568095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 2532642 - 2532530
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||||||||  ||||||  |||||| |||||||||||||||||||||||||||  |||| ||| | ||||||||||||| |||||||  |||||    
T  2532642 tagagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttacccctgcggtaattaactaccgaag-tttggaa--ccggc 2532546  T
Q  367 tgcagttaactgccga 382  Q
    ||||||||||| ||||    
T  2532545 tgcagttaactcccga 2532530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 8539592 - 8539536
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  8539592 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaa 8539536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 42913017 - 42912897
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  | |  |   |||||||||| |||||| |  ||||||||| | || ||||| |    
T  42913017 agagaattgctgtttacacatttgataaggctgtgccacacgagtattttatttaaatgcccttcggtagttaattgtcgaagttttagtaaaccggcgg 42912918  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||| |||||||||||    
T  42912917 cagttaactaccgaggaaaac 42912897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 1397474 - 1397371
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    ||||||||||||||||||| ||||||||||| | || |||||| ||| ||||||||||||| | || |  || ||||||||||||||||||||||||||     
T  1397474 cacatttgataaggttgtggcacacgagtaatttacatttttgccccctcggcagttaactgctgaggaattagaaatccggctgcagttaactgccgat 1397375  T
Q  384 gaaa 387  Q
    ||||    
T  1397374 gaaa 1397371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 31787489 - 31787559
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaa 342  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||| |||||||||||    
T  31787489 aattgctgtttacacatttgataaggctgtgccacacgagtaaatgacatttttaccccctcggcagttaa 31787559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 3891480 - 3891537
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  3891480 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 3891537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 30705070 - 30705187
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaag-ttttggaaatccggct 367  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| | | ||||   |||||||| |||||||||| |||||| |||| | || |||||     
T  30705070 agagaattgttgtttacacatttcataaggctgtgccacacgagtcatttacgtaaatgcccttcagcagttaactgccgaagtttttagtaaaccggcg 30705169  T
Q  368 gcagttaactgccgagga 385  Q
    |||||||||| |||||||    
T  30705170 gcagttaactaccgagga 30705187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 11348551 - 11348495
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  11348551 tcggcagttaactgccgaagttttagaaatccggatgcagttaactgccgaggaaaa 11348495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 389
Target Start/End: Original strand, 41798748 - 41798872
Alignment:
Q  266 tctagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccg 364  Q
    |||||||||||| ||||  |||| |||||||||  ||||||||| ||||||  | | ||||||||  ||||||||||||| | ||||  || ||||||||    
T  41798748 tctagagaattgttgttcccacaattgataaggccgtgccacactagtaaaatatgattttgccccctcggcagttaactgctgaagaatttgaaatccg 41798847  T
Q  365 gctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||| ||||||    
T  41798848 gctgcagttaactgccgaagaaaac 41798872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 389
Target Start/End: Complemental strand, 34124073 - 34123954
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||| ||||  ||||||| ||||||||||||||||| ||||||  ||| ||||| ||| |||||||||||||  |||    || |||||||||||||    
T  34124073 agaattgttgttcccacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgc 34123974  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||| ||||||||    
T  34123973 agttaactgccaaggaaaac 34123954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 18512730 - 18512672
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||||    
T  18512730 cttcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgccgaggaaaa 18512672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 25897218 - 25897100
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||| ||||||||||||||||||| ||||||  |   |||| ||| ||||||||||||||||||| |  || ||| ||||||||    
T  25897218 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatattattttaccccttcggcagttaactaccgaggaatttgaactccggctg 25897119  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||| ||||||    
T  25897118 cagttaactgcccaggaaa 25897100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 39743288 - 39743167
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  |||||||||||||| |||||||||| ||||||  | | ||||| ||| ||| ||||||||| |||| |  || ||||| || ||    
T  39743288 agagaattgttgttcccacatttgataaggctgtgccacactagtaaaatatgattttgccccctcgacagttaactgccgaggaatttgaaattcgact 39743189  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  39743188 gcagttaactgccgaggaaaac 39743167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 25877556 - 25877675
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||  ||||||||||| ||||||||||||  |||||||| || |||||||| |||| | |||| |  || |||| |||||||    
T  25877556 gagaattgttgttgacacattgcataaggttgtgtcacacgagtaaaatacgtttttaccacttcggcaattaaatgccgaggaattcgaaa-ccggctg 25877654  T
Q  369 cagttaactgccgaggaaaac 389  Q
    || ||||||||||||||||||    
T  25877655 caattaactgccgaggaaaac 25877675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 28388658 - 28388538
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||||||| ||  |||||| |||||||||||||||  | ||  ||||||||  |||||||||| || |||| |  || ||||||| ||||    
T  28388658 gagaattgttgtttacactttacataaggctgtgccacacgagtattttactcttttgccccctcggcagttagctgccgaggaatttgaaatccagctg 28388559  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  28388558 cagttaactgccgaggaaaac 28388538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 21041009 - 21041056
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaa 315  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  21041009 tagagaattgctatttacacatttgataaggttatgccacacgagtaa 21041056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 355
Target Start/End: Complemental strand, 27673793 - 27673706
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt 355  Q
    |||||||||| |||||||||||||||||||| | |||||||||||| | | ||||   ||| ||| ||||||||||| ||||||||||    
T  27673793 tagagaattgttgtttacacatttgataaggctatgccacacgagtcatttacgtaaatgctctttggcagttaactgccgaagtttt 27673706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 27867959 - 27867840
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||| |||||||| |||||||||| ||||||  ||| |||| |||  ||||||||||||| |||| |  || ||| ||||||||    
T  27867959 gagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattccggctg 27867860  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||| ||||||||||||||    
T  27867859 cagtttactgccgaggaaaa 27867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 38971763 - 38971649
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttt-tggaaatccggc 366  Q
    |||||||||| |||| ||||||||| | |||||| | ||||||| ||| | || |   ||||||||||||||||||| ||||| ||| |||||| |||||    
T  38971763 tagagaattgttgttgacacatttggttaggttgagacacacgactaatttacctaaatgcccttcggcagttaactcccgaattttgtggaaa-ccggc 38971665  T
Q  367 tgcagttaactgccga 382  Q
    ||||||||||||||||    
T  38971664 tgcagttaactgccga 38971649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 5768 - 5830
Alignment:
Q  327 gcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| ||||||||||||| |||||||||| ||||| || |||||||||| |||||||||||||    
T  5768 gcccctcggcagttaactgccgaagttttagaaatacgactgcagttaattgccgaggaaaac 5830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 2532020 - 2532130
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||||||||| |||||||||||||||||| ||| ||| ||||||||| ||||| |||||||  |||||||    
T  2532020 gagaattgttgttcccacattacataaggctgtgccacacaagtaaatgacgtttttgctcctgcggtagttaactatcgaag-tttggaa--ccggctg 2532116  T
Q  369 cagttaactgccga 382  Q
    || |||||| ||||    
T  2532117 caattaactaccga 2532130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 8537149 - 8537195
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaa 316  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  8537149 gagaattgctatttacacatttgataaggctgtgccacacgagtaaa 8537195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 30887484 - 30887382
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    |||||||||||| |||||| ||||||||||| | ||||||||||  | | ||||||||||| |  | |  || |||||||||||||||||||||||||||    
T  30887484 cacatttgataacgttgtggcacacgagtaatttacgtttttgcttcctaggcagttaactgctaaggaattagaaatccggctgcagttaactgccgag 30887385  T
Q  384 gaa 386  Q
    |||    
T  30887384 gaa 30887382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 19037549 - 19037489
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||    
T  19037549 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaac 19037489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 28238103 - 28238193
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  28238103 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 28238193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 30708897 - 30708957
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  30708897 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgagggaaac 30708957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 383
Target Start/End: Original strand, 18512228 - 18512279
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    ||||||||||||| ||||||||| | ||| ||||||||||||||||||||||    
T  18512228 tcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgccgag 18512279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 30192483 - 30192546
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||| ||||| ||||  | | ||||||||||||||||| ||||||||||    
T  30192483 tgcccttcggcagttaactgccgaaattttaaagaaccggctgcagttaactgtcgaggaaaac 30192546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 38407132 - 38407190
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg 327  Q
    ||||||||| ||||  ||||||||||||||||||| ||||||||||| | |||||||||    
T  38407132 agagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttg 38407190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 28886502 - 28886449
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtt 353  Q
    ||||||||||||||||||||| ||  |||||||||||| |||||| ||||||||    
T  28886502 tgtgccacacgagtaaatgaccttaatgcccttcggcaattaactgccgaagtt 28886449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 8577023 - 8576967
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgagga 385  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||||||||| ||||    
T  8577023 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccaagga 8576967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 13837714 - 13837778
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttg-gaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||| |||| ||||||||||  | || ||||| ||||||||||||||||||||||    
T  13837714 tgcccttcggcagtaaactgccgaagtttttagtaaaccggcggcagttaactgccgaggaaaac 13837778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 20744075 - 20744015
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaa 386  Q
    ||||| ||||||||||||| ||||||||||  | |  ||||||||||||||||||||||||    
T  20744075 tgcccctcggcagttaactgccgaagttttaaagaatcggctgcagttaactgccgaggaa 20744015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 28876607 - 28876697
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaag--ttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  |||||||||  ||||||||| ||||| |||||||||| |||||||||||    
T  28876607 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagttttttggaaa-ccggcggcagttaactcccgaggaaaac 28876697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 38968089 - 38968149
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||| ||||||||||||| |  |   ||||||||||||||||||||||||||||||||    
T  38968089 ccttcggtagttaactaccgaggaataaaaaatccggctgcagttaactgccgaggaaaac 38968149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 41799906 - 41799786
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  |||||||||||||  |||| ||||||||||| | || |||||| ||| ||| ||||||||| | || |  || ||||||  ||||    
T  41799906 gagaattgttgttcccacatttgataagactgtgacacacgagtaatttacttttttgccccctcgacagttaactgctgaggaattagaaatctagctg 41799807  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||| ||||||    
T  41799806 cagttaactgccgatgaaaac 41799786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 387
Target Start/End: Original strand, 42937124 - 42937244
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||| ||| ||||| ||||||  |||||| || | ||||| ||||||  ||||||||  ||| ||||| ||||||| |||||||||  |||| |||||    
T  42937124 tagagagttgttgtttccacattgcataaggctgaggcacacaagtaaaatacgtttttatcccatcggcggttaactgccgaagtttaagaaaaccggc 42937223  T
Q  367 tgcagttaactgccgaggaaa 387  Q
     ||||||||||||||| ||||    
T  42937224 ggcagttaactgccgaagaaa 42937244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 2170634 - 2170575
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    |||||| |||||||||| |||| ||||  | | |||||||||||||||||||||||||||    
T  2170634 ccttcgacagttaactatcgaaattttaaagaaccggctgcagttaactgccgaggaaaa 2170575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 7021909 - 7021878
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||||||||||||||    
T  7021909 gaaatccggctgcagttaactgccgaggaaaa 7021878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 37820905 - 37820874
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||||||||||||||    
T  37820905 gaaatccggctgcagttaactgccgaggaaaa 37820874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 38408549 - 38408490
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    |||||||||||| |||||| |||||||||| |||| ||| | |||||||||| |||||||    
T  38408549 tgcccttcggcaattaactgccgaagttttagaaaaccgacggcagttaactcccgagga 38408490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 28880318 - 28880376
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||  ||||||||||||||||    
T  28880318 tcggcagttaactgccgaaattttgaaaaatccggctgcagcaaactgccgaggaaaac 28880376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 42942590 - 42942472
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  |||||||||||||| || |  |||| ||||||  ||| |||| |||  | ||||||||||| |||||||||| |||| || || |    
T  42942590 gagaattgttgttcccacatttgataaggctgagaaacacaagtaaaatacgcttttacccccttggcagttaactgccgaagttttagaaaaccagcgg 42942491  T
Q  369 cagttaactgccgaggaaa 387  Q
    || ||||||||||||||||    
T  42942490 caattaactgccgaggaaa 42942472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Original strand, 13563664 - 13563717
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||| ||||||  |  | |||||||||||||||||||||||||||    
T  13563664 tcggcagttaactgccgaagaatatgtaatccggctgcagttaactgccgagga 13563717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 30611172 - 30611253
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccga 349  Q
    ||||||||| |||| ||||||||||||||| || |  |||||||||||   |||||||| ||| | ||||||||||||||||    
T  30611172 agagaattgttgttcacacatttgataaggctgagaaacacgagtaaaattcgtttttgcccccttggcagttaactaccga 30611253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 41623128 - 41623071
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||||||| ||||| ||||  | | ||||||||||| ||||||||||||    
T  41623128 cccttcggcagttaactgccgaaattttaaagaaccggctgcagtaaactgccgagga 41623071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 14280981 - 14280919
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  14280981 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 14280919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Original strand, 27863451 - 27863483
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| |||||||||||||||||||||||    
T  27863451 gaaatccggttgcagttaactgccgaggaaaac 27863483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 30711236 - 30711178
Alignment:
Q  332 tcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||||||||  |||| || ||| ||||||||||||||||||||||    
T  30711236 tcggcagttaactgccgaagtttttaggaagtc-ggcggcagttaactgccgaggaaaac 30711178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 38855788 - 38855730
Alignment:
Q  332 tcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||   ||||| ||||| ||||||||||||||||||||||    
T  38855788 tcggcagttaactgccgaagtttgaaggaaa-ccggcggcagttaactgccgaggaaaac 38855730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 42537135 - 42537215
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccga 349  Q
    |||||||| |||| ||||||||||||||| || |  |||||||||||  || |||||| ||| ||||||||||||| ||||    
T  42537135 gagaattgttgttcacacatttgataaggctgagaaacacgagtaaaatacatttttgccccatcggcagttaactgccga 42537215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 23347466 - 23347347
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  23347466 gagaattgctgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttgcccttcggcagttaactgccgaagttttagaaatccggctgc 23347367  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||||| |||||||||||    
T  23347366 agttaactaccgaggaaaac 23347347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 23346713 - 23346834
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  23346713 tagagaattgttgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactgccgaagttttataaatccggct 23346812  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||||||    
T  23346813 gcagttaactgccaaggaaaac 23346834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 7190091 - 7189970
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| ||||  ||||||  ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  7190091 tagagaattgatgttcccacattacataaggttgtgccacacgagtaaattacgtttttgcccctcggcagttaactgccgaagttttagaaatccggct 7189992  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  7189991 gcagttaactgccgaggaaaac 7189970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 3943330 - 3943211
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  |||||| ||||||| | ||||||||||||||||||||||||||| | ||||||||||||| |||||||||| |||||||||||||    
T  3943330 gagaattgttgttcccacattagataaggctatgccacacgagtaaatgacgtttttgctcctcggcagttaactgccgaagttttagaaatccggctgc 3943231  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||||||||||| |||||    
T  3943230 agttaactgccgagaaaaac 3943211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 43870260 - 43870140
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||| |||    
T  43870260 gagaattgatgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccccatcggcagttaactgccgaagttttagaaatccgactg 43870161  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||| ||||||||||||||    
T  43870160 cagttagctgccgaggaaaac 43870140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 28419342 - 28419461
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  | || |   ||||||||||||||||||| |||||||||| | || ||||| |     
T  28419342 gagaattgctgtttacacatttgataaggctgtgccacacgagtattttacctaaatgcccttcggcagttaactgccgaagttttagtaaaccggcggt 28419441  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||||| |||||||||||    
T  28419442 agttaactaccgaggaaaac 28419461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 20951184 - 20951069
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||  ||||| |||||||| |||||||||| ||||||| || |   ||||||||||||||||||| |||| |  || |||||||||||||    
T  20951184 gagaattgctgttcccacatgtgataaggctgtgccacaccagtaaattacctaaatgcccttcggcagttaactgccgaggaatttgaaatccggctgc 20951085  T
Q  370 agttaactgccgagga 385  Q
    ||||||||||||||||    
T  20951084 agttaactgccgagga 20951069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 10825175 - 10825272
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||| || ||||||| |||||||||| || |||| ||||||||||||||||||| ||||||||||||||  |||||| ||||||||||    
T  10825175 ataaggttgtgccatacaagtaaataacgtttttgctccctcggtagttaactaccgaagttttagaaatccggctgcacctaactgtcgaggaaaac 10825272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 28137791 - 28137876
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccctt-cggcagttaactaccgaagttt 354  Q
    |||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||    
T  28137791 gagaattgctgttcccacattatataaggttgtgccacacgagtaaatgacgtttttgcccttacagcagttaactactgaagttt 28137876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 389
Target Start/End: Original strand, 1096533 - 1096649
Alignment:
Q  274 attgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagt 372  Q
    |||| ||||| ||||||||||||||||||| ||||| ||||||  ||| ||||||||  ||||| ||||||| |||| |  || ||||||||||||||||    
T  1096533 attgttgtttccacatttgataaggttgtggcacactagtaaaatacgattttgccccctcggctgttaactgccgaggaatttgaaatccggctgcagt 1096632  T
Q  373 taactgccgaggaaaac 389  Q
    |||||||||||||||||    
T  1096633 taactgccgaggaaaac 1096649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 1149404 - 1149526
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  ||||||||||||||||||||||||| ||||||  ||| |||||| || ||||||||||||| |||| |  || ||||||||      
T  1149404 tagagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacgattttgctccctcggcagttaactgccgaggaatttgaaatccgat 1149503  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
    |||||||||||| ||||||||||    
T  1149504 tgcagttaactgtcgaggaaaac 1149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 39377635 - 39377720
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttt 354  Q
    |||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||| || ||| ||||||||| ||||||||    
T  39377635 gagaattgctgtttccacattacataaggctgtgccacacgagtaaatgacgtttttgcctctgcggtagttaactatcgaagttt 39377720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 28477178 - 28477086
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||| |||| ||  |  ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  28477178 ggttgtgccacacgagcaaattactctaatgcccctcgacagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 28477086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 10424774 - 10424893
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||  |||||||| |  || |||||||||||||||||| ||     ||||| || |||||||||| |||||||||| ||||| ||||| |    
T  10424774 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcagcagttaactgccgaagttttagaaatacggctac 10424873  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  10424874 agttaactgccgaggaaaac 10424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 17688219 - 17688330
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||||||  ||||||  |||||| |||||||||||| |||||||||||||||| ||| ||| |||||||||| |||| |||||||  ||||||    
T  17688219 agagaattgctgttcccacattacataaggctgtgccacacgaataaatgacgtttttgctcctgcggtagttaactactgaag-tttggaa--ccggct 17688315  T
Q  368 gcagttaactgccga 382  Q
    |||||||||| ||||    
T  17688316 gcagttaactaccga 17688330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 27276514 - 27276393
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  ||||| |||||||| |||||||||| ||||||  ||| |||| |||  ||||||||||||| | || |  || |||||||||||    
T  27276514 agagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgctgaggaatttgaaatccggct 27276415  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  27276414 gcagttaactgccgaggaaaac 27276393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 30803094 - 30803037
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  30803094 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 30803037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 36510932 - 36510875
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  36510932 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 36510875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 388
Target Start/End: Complemental strand, 39378422 - 39378337
Alignment:
Q  301 gtgccacacgagtaaatgacgtttttgccctt-cggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||   |||||||||||||||||||| |||||    
T  39378422 gtgccacacgagtaaatgacgtttttgcctttgcggtagttaactaccgaag-tttggaa--tcggctgcagttaactgccgacgaaaa 39378337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 17424126 - 17424186
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||    
T  17424126 cttcggcagttaactgccgaaattttggaaaatccggctgcagttaactgccgaggaaaac 17424186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 380
Target Start/End: Complemental strand, 29074143 - 29074031
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| ||||  |||||||| |  ||||||||||||||||||||| ||     ||||| ||||||||||||| |||||||||| ||||||| ||     
T  29074143 tagagaattgttgttcccacatttggtttggttgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatccagcg 29074044  T
Q  368 gcagttaactgcc 380  Q
    |||||||||||||    
T  29074043 gcagttaactgcc 29074031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 24749619 - 24749738
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacg-tttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||||||  ||||| |||||||| |||||||||| ||||||  ||| ||||  ||| |||||||||||||||||| |  || ||| |||| ||    
T  24749619 agagaattgctgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactaccgaggaatttgaattccgact 24749718  T
Q  368 gcagttaactgccgaggaaa 387  Q
    | ||||||||||||||||||    
T  24749719 gtagttaactgccgaggaaa 24749738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 382
Target Start/End: Complemental strand, 28138425 - 28138314
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||||||  ||||||  | |||| | |||||||||||||||||||||||||| |||| || |||||||||||||| | |||||||  ||||||    
T  28138425 agagaattgctgttcccacattacaaaaggctatgccacacgagtaaatgacgtttttgtccctgcgacagttaactaccgatg-tttggaa--ccggct 28138329  T
Q  368 gcagttaactgccga 382  Q
    |||||||||| ||||    
T  28138328 gcagttaactcccga 28138314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 41273386 - 41273267
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||||||||||  ||| || |||||||||||||||  | | |    ||||||||||||||||||| |||||||||| | ||  |||| ||    
T  41273386 gagaattgttgtttacacattacatatggctgtgccacacgagtactttatgaaaatgcccttcggcagttaactgccgaagttttagtaaatcggcggc 41273287  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  41273286 agttaactgccgaggaaaac 41273267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 3940900 - 3940969
Alignment:
Q  298 gttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||| | |||||||| ||||| |||||    
T  3940900 gttgtgccatacgagtgaatgacgtttttgtccttcggcagttaactgctgaagttttagaaattcggct 3940969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 390
Target Start/End: Complemental strand, 34639453 - 34639332
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  |||||||||||||| |||||||||| ||||| | || |||||||||  ||||||| ||||| ||||    ||  |||||||||||    
T  34639453 gagaattgatgttcccacatttgataaggctgtgccacactagtaatttacttttttgccccctcggcaggtaactgccgagaaattaaaaatccggctg 34639354  T
Q  369 cagttaactgccgaggaaaaca 390  Q
    ||||||||||| ||||||||||    
T  34639353 cagttaactgctgaggaaaaca 34639332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 388
Target Start/End: Complemental strand, 1101192 - 1101072
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  || ||||||||||||||||| | || ||||||  | | |||||| || ||||||||||||| |||| |  || |||||||||||    
T  1101192 agagaattgttgttcccatatttgataaggttgtgctatactagtaaaatatgattttgctccctcggcagttaactgccgatgaatttgaaatccggct 1101093  T
Q  368 gcagttaactgccgaggaaaa 388  Q
    | |||||||||||||||||||    
T  1101092 gtagttaactgccgaggaaaa 1101072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 43982193 - 43982253
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||    
T  43982193 cttcggcagttaactaccgaaattttctcaaatccggctgcagttaactgccgaggaaaac 43982253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 43619281 - 43619163
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaag-ttttggaaatccggctg 368  Q
    |||||||||||||  |||||||| |  || |||||||||||||||||| |      ||||||||||||||||||| |||||| |||| | || ||||| |    
T  43619281 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaattaatcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcgg 43619182  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  43619181 cagttaactgccgaggaaa 43619163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 7184990 - 7185107
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||||||||||  |||||| ||||||| |||||||  | | |    ||||||||||||||||||| ||||| |||| | || |||||  |    
T  7184990 gagaattgctgtttacacattacataaggctgtgccaaacgagtactttatgaaaatgcccttcggcagttaactgccgaatttttagtaaaccggcgac 7185089  T
Q  370 agttaactgccgaggaaa 387  Q
    ||| ||||||||||||||    
T  7185090 agtaaactgccgaggaaa 7185107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 10425895 - 10425838
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| ||||||||  ||||||||| ||||| |||||||||||||||||||||||||||    
T  10425895 tcggtagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaac 10425838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 33222613 - 33222670
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||| ||||  | | ||||||||||||||||||||||||||||    
T  33222613 tcggcagttaactaccgaaattttaaagaaccggctgcagttaactgccgaggaaaac 33222670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 39489176 - 39489237
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| ||||||||||  |||| || ||||||||||||| ||||||||||    
T  39489176 cccttcggcagttaactgccgaagttttacaaatacgactgcagttaactgtcgaggaaaac 39489237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 25184968 - 25184849
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| ||| |||  ||||||||| | ||||||||||||  ||||||||||||  || ||||||||||  ||| |  || |||| |||||||    
T  25184968 gagaattgttgttgacagattgcataaggttgaggcacacgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaatttgaaa-ccggctg 25184870  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  25184869 cagttaactgccgaggaaaac 25184849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 29947729 - 29947821
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||| |||||||||||| ||     ||||| ||||||||||||| |||||||||| ||||| |||||| ||||||| || |||||||||    
T  29947729 ggttgtgctacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctggagttaaccgctgaggaaaac 29947821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 388
Target Start/End: Complemental strand, 35493481 - 35493361
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| |||| |||||||  ||||||||| | ||||||||||||  ||| ||||| ||| |||| |||||||| |||| |  ||  ||| || |||    
T  35493481 agagaattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtagttaactgccgaggaattcaaaaaccagct 35493382  T
Q  368 gcagttaactgccgaggaaaa 388  Q
    |||||||||||||||||||||    
T  35493381 gcagttaactgccgaggaaaa 35493361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 38945759 - 38945815
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||| |||| |  || ||||||||||||||||||||||||||||||||    
T  38945759 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 38945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 41181371 - 41181504
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||  |||||| || | ||||||||||||  ||||||||| ||| ||||||||||||| |||| |  ||  | | ||||||     
T  41181371 gagaattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccgaggaattcaataaccggcta 41181470  T
Q  369 cagttaactgccgaggaaaacaatattatgcagaca 404  Q
    || |||||||||||||||||||  ||||||||||||    
T  41181471 catttaactgccgaggaaaaca--attatgcagaca 41181504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 41497406 - 41497526
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||| || |||||||  |||||| || | ||||||||||| | ||||||||||| | ||| || |||||| ||||||  ||  ||| |||||||    
T  41497406 gagaattgctcttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccacctcgacacttaactgccgaagaattcaaaaaccggctg 41497505  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||| |||||||||||||    
T  41497506 cagttaattgccgaggaaaac 41497526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 41500373 - 41500253
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||| ||| || || |  |||||||||||  ||| ||||||||  |||||||||||||| | |||  ||  |||||||||||    
T  41500373 gagaattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgcttttgccccctcggcagttaactatcaaagaattcaaaatccggctg 41500274  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||||||||| |||||    
T  41500273 cagttaactgccgagaaaaac 41500253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 387
Target Start/End: Complemental strand, 3803619 - 3803564
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    ||||||||||||| |||| |  || |||||||||||||||||||||||||||||||    
T  3803619 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaa 3803564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 22003537 - 22003420
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgca 370  Q
    ||||||||||  |||||||| |  || |||||||||||||||||| ||     |||||||||| ||| |||| ||||||||||  ||||| ||||| |||    
T  22003537 aattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggcggca 22003439  T
Q  371 gttaactgccgaggaaaac 389  Q
    |||||||||||||||||||    
T  22003438 gttaactgccgaggaaaac 22003420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 24607708 - 24607589
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| |||| |||||||  |||||| || | |||||  |||| | |||||||| |||  || |||||||||| |||||| |||  ||| ||||||    
T  24607708 agagaattgttgttgacacattgcataaggctgaggcacacaggtaatttacgttttttccccctcagcagttaactgccgaagatttaaaaaaccggct 24607609  T
Q  368 gcagttaactgccgaggaaa 387  Q
    ||||||||||||||||||||    
T  24607608 gcagttaactgccgaggaaa 24607589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 3086033 - 3086083
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    ||||||||||||| |||||||||| ||||| |||||| |||||||||||||    
T  3086033 tcggcagttaactgccgaagttttagaaatacggctgtagttaactgccga 3086083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 354
Target Start/End: Complemental strand, 17688874 - 17688812
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttt 354  Q
    |||||| | ||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||    
T  17688874 ataaggctatgccacacgtgtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 17688812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 37322187 - 37322133
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaa 386  Q
    ||||||||||||| ||||| ||||| | | |||||||||||||||||||||||||    
T  37322187 tcggcagttaactgccgaaattttgaagaaccggctgcagttaactgccgaggaa 37322133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 389
Target Start/End: Original strand, 2917620 - 2917737
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| |||| |||||||| |||||| || | ||||  ||||||  ||||||||||||  ||||||||||||| ||||    ||| ||| |||||| |||    
T  2917620 aattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggctacag 2917719  T
Q  372 ttaactgccgaggaaaac 389  Q
    ||||||||||||||||||    
T  2917720 ttaactgccgaggaaaac 2917737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 3795334 - 3795391
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||| |  || |||||||||||||||||||||||||||||||||    
T  3795334 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaac 3795391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 20937832 - 20937917
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt 355  Q
    |||||||| ||||  |||||||| |  || |||||||||||||||||| || |   ||||||||||||||||||| ||||||||||    
T  20937832 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttt 20937917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 389
Target Start/End: Original strand, 29397859 - 29397964
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    ||||||||| ||| ||||| ||||||||||| | || |||||||||| ||| ||||||| | | ||    || |||||||| ||||||||||||||||||    
T  29397859 cacatttgacaagattgtgtcacacgagtaatttacttttttgccctatcgacagttaattgctgagaaattagaaatccgactgcagttaactgccgag 29397958  T
Q  384 gaaaac 389  Q
    ||||||    
T  29397959 gaaaac 29397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 29406965 - 29407026
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| ||||| ||||  | | ||||||||| ||||||||||||||||||    
T  29406965 cccttcggcagttaactgccgaaattttaaagaaccggctgcaattaactgccgaggaaaac 29407026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 2528607 - 2528723
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||||||||| |||||||  |||||| |||| ||||| ||||| | ||     ||||||||||||||||||| ||||| || |||||  ||||||||    
T  2528607 gagaattgctgttcacacattgcataaggctgtgtcacactagtaatttaccgcaatgcccttcggcagttaactgccgaa-ttatggaa--ccggctgc 2528703  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||  ||||||||||    
T  2528704 agttaactatcgaggaaaac 2528723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 3937931 - 3937871
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||| ||||    
T  3937931 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggtaaac 3937871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 43258812 - 43258752
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||| |||||||||   ||| |||||||||||||||| |||| ||||||    
T  43258812 ccttcggcagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaagaaaac 43258752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 44100879 - 44100817
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  44100879 cccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 44100817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 389
Target Start/End: Original strand, 25964834 - 25964865
Alignment:
Q  358 aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||||||||||||    
T  25964834 aaatccggctgcagttaactgccgaggaaaac 25964865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 40156390 - 40156453
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||| ||||||| | ||||| ||||| ||| ||||||||||||||||| ||||||||||    
T  40156390 tgcccctcgacagttaattgccgaaattttgaaaaaccggctgcagttaactgacgaggaaaac 40156453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 387
Target Start/End: Original strand, 43976849 - 43976904
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    ||||||||||||| ||||| ||||  ||| ||||||| ||||||||||||||||||    
T  43976849 tcggcagttaactgccgaaattttaaaaaaccggctgtagttaactgccgaggaaa 43976904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 12252561 - 12252499
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaacaa 391  Q
    ||||||||||||||||  |||| ||||  | | |||||||||||||||| |||||||||||||    
T  12252561 ccttcggcagttaactgtcgaaattttaaagaaccggctgcagttaacttccgaggaaaacaa 12252499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 43257744 - 43257802
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    ||||||||||||||||  ||||||||   ||| ||||| ||||||||||||||||||||    
T  43257744 ccttcggcagttaactgtcgaagtttgaaaaaaccggcagcagttaactgccgaggaaa 43257802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 28342506 - 28342575
Alignment:
Q  319 acgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||||||||| ||||||||||||||  |||||  ||  ||| ||||||||| ||||||||||||||||    
T  28342506 acgtttttgccccttcggcagttaactgtcgaagaattcaaaaaccggctgcaattaactgccgaggaaa 28342575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 29401687 - 29401630
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    ||||| |||||||||||||  ||||||||| |||| ||||| |||||||||| |||||    
T  29401687 tgcccctcggcagttaactgtcgaagttttagaaaaccggcggcagttaactcccgag 29401630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 38950609 - 38950548
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||||||||||||  ||||||| ||||| | || |||||  |||||||||||||||||||    
T  38950609 tgcccttcggcagtttgctaccgaggttttaggaaaccggcgacagttaactgccgaggaaa 38950548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 39947592 - 39947653
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||| ||| ||||  ||||||||| | || ||||| ||||||||||||||||||||||    
T  39947592 cccttcggtagtaaactgtcgaagttttagtaaaccggcggcagttaactgccgaggaaaac 39947653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 17420558 - 17420616
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgag 383  Q
    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||    
T  17420558 tgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgag 17420616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 18000224 - 18000286
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  18000224 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 18000286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 28472107 - 28472163
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgagga 385  Q
    |||||| |||||||| ||||| ||||| ||| ||||||||||||||||||| |||||    
T  28472107 cttcggtagttaactgccgaaattttgaaaaatccggctgcagttaactgctgagga 28472163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 33416122 - 33416154
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaa 360  Q
    |||||||||||||||||||||||||||| ||||    
T  33416122 cccttcggcagttaactaccgaagttttagaaa 33416154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 41564573 - 41564511
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  41564573 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 41564511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 16984300 - 16984180
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||| ||||||||||||    
T  16984300 gagaattgctgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcagttaactgccgaagttttagaaatccggctg 16984201  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  16984200 cagttaactgccgaggaaaac 16984180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 388
Target Start/End: Original strand, 28081393 - 28081511
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  28081393 gagaattactgtttacacatttgataaggctgtaccacacgagtaaatggcgtttttgcccttcggcagttaactgccgaagttttagaaatccgactgc 28081492  T
Q  370 agttaactgccgaggaaaa 388  Q
    |||||||||||||||||||    
T  28081493 agttaactgccgaggaaaa 28081511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 16983455 - 16983576
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||| |||||||||||    
T  16983455 agagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcagttaactgccgaagttttagaaatccggct 16983554  T
Q  368 gcagttaactgccgaggaaaac 389  Q
     ||||||||||||||| |||||    
T  16983555 acagttaactgccgagaaaaac 16983576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 44674098 - 44674216
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| ||||  ||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||  |||| |||||||    
T  44674098 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccccttggcagttaactgccgaagtttaagaaacccggctg 44674197  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  44674198 cagttaactgccgaggaaa 44674216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 39590707 - 39590587
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||| ||||||  |||||| |||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||| ||||| | ||||    
T  39590707 gagaattgctgtttccacattatataaggctgtgccacacgagtaaatgatgtttttgccccctcggcagttaactgccgaagttttagaaatacagctg 39590608  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  39590607 cagttaactgccgaggaaaac 39590587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 51492004 - 51492125
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| ||||  ||||||  ||||||||||||||||||||||||||||||||||||   |||||| ||||||  ||||||||| |||||||||||    
T  51492004 tagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcttctcggcaattaactgtcgaagttttagaaatccggct 51492103  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||||||    
T  51492104 gcagttaactgcctaggaaaac 51492125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 404
Target Start/End: Complemental strand, 50278938 - 50278803
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  ||||||||||||||||||| ||||||||||| | ||||||||| ||| ||| |||||||||  ||| |  || |||||||||||    
T  50278938 agagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgtcccctcgacagttaactgtcgatgaattagaaatccggct 50278839  T
Q  368 gcagttaactgccgaggaaaacaatattatgcagaca 404  Q
    |||||||||||||||||||||||| ||||||||||||    
T  50278838 gcagttaactgccgaggaaaacaa-attatgcagaca 50278803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 271 - 389
Target Start/End: Complemental strand, 16473817 - 16473699
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgca 370  Q
    ||||||||||||||||||||  ||||||||||||||||||||||  | |||    ||||||||||||||||||| |||||||||| | || ||||| |||    
T  16473817 agaattgctgtttacacattacataaggttgtgccacacgagtactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcggca 16473718  T
Q  371 gttaactgccgaggaaaac 389  Q
    ||||||| |||||||||||    
T  16473717 gttaactaccgaggaaaac 16473699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 21023026 - 21022907
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||  |||||||| |  || |||||||||||||||||| ||     ||||| ||||||||||||| |||||||||| ||||| |||||||    
T  21023026 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgc 21022927  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  21022926 agttaactgccgaggaaaac 21022907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 50274694 - 50274812
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||||||| || |||| ||||||||||| | ||||||||||||  ||||||||||||| |||| |  || ||||||||||||    
T  50274694 gagaattgttgttcccacatttgatagggctgtggcacacgagtaatttacgtttttgccccctcggcagttaactgccgaggaattagaaatccggctg 50274793  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  50274794 cagttaactgccgaggaaa 50274812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 28235701 - 28235580
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| ||||||||||||  |||||| ||| |||||||||||  | |||    ||||||||||||||||||| |||||||||| | || |||||     
T  28235701 tagagaattgttgtttacacattacataaggctgtaccacacgagtattttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcg 28235602  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  28235601 gcagttaactgccgaggaaaac 28235580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 56138179 - 56138306
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactacc--gaagtt---ttggaaat 361  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||||  ||| ||||| ||||||| ||||||||| ||  ||| ||   ||  ||||    
T  56138179 tagagaattgctgttcccacatttgataaggttgtgccacactagtaaaatacgattttgccccttcgacagttaactgccgagaaattaaattaaaaat 56138278  T
Q  362 ccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||||||||    
T  56138279 ccggctgcagttaactgccgaggaaaac 56138306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 382
Target Start/End: Complemental strand, 3186203 - 3186090
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  | || |   || |||||| ||||||||| | |||||||| | || ||||| |    
T  3186203 agagaattgctgtttacacatttgataaggctgtgccacacgagtattttacctaaatgtccttcgacagttaactgcagaagttttagtaaaccggcgg 3186104  T
Q  369 cagttaactgccga 382  Q
    ||||||||||||||    
T  3186103 cagttaactgccga 3186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 38369262 - 38369201
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  38369262 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 38369201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 9889928 - 9890048
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||| |||||||| |||||||||| ||||||  ||| |||| |||  ||||||||||||| |||| |  || ||||||||||||    
T  9889928 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 9890027  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  9890028 cagttaactgccgaggaaaac 9890048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 384
Target Start/End: Original strand, 37394182 - 37394297
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||| |||||  ||||||||||| ||||||||||||| ||||||  ||| ||||||| |||||||||||||||  ||| |  || ||||||||| ||    
T  37394182 gagaattactgttcccacatttgatatggttgtgccacactagtaaaatacgattttgcctcttcggcagttaactgtcgaggaatttgaaatccggatg 37394281  T
Q  369 cagttaactgccgagg 384  Q
    ||||||||||||||||    
T  37394282 cagttaactgccgagg 37394297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 39588049 - 39588142
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    |||||| |||| ||||||||||||||||||||||| ||| ||||||||||||| |||| |  || ||||| || ||||||||||||||||||||    
T  39588049 ataaggatgtgtcacacgagtaaatgacgtttttgccccctcggcagttaactgccgaggaattagaaattcgactgcagttaactgccgagga 39588142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 40833686 - 40833629
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  40833686 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 40833629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 388
Target Start/End: Original strand, 1041869 - 1041988
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  |||||||||||||| ||||  |||||||||| | || |||||||||  ||||||||||||| |||| |  || |||||||| |||    
T  1041869 gagaattgttgttcccacatttgataaggctgtggtacacgagtaatttacttttttgcccgatcggcagttaactgccgaggaattagaaatccgactg 1041968  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||||||||||||| ||||    
T  1041969 cagttaactgccgagaaaaa 1041988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 56565693 - 56565811
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgca 370  Q
    ||||||||||||||||||||  |||||| |||||||||||||||  | |||    | | |||| ||||||||||  ||||||||| | || ||||| |||    
T  56565693 agaattgctgtttacacattacataaggctgtgccacacgagtagtttacgaaaattctcttcagcagttaactgtcgaagttttagtaaaccggcggca 56565792  T
Q  371 gttaactgccgaggaaaac 389  Q
    |||||||||||||||||||    
T  56565793 gttaactgccgaggaaaac 56565811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 1044660 - 1044539
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||   ||||||||||| ||| |||||||| ||||||  | | |||||| ||||||||||||||||  ||| |  || |||||| |||    
T  1044660 tagagaattgatgttccaacatttgataaagttatgccacactagtaaaatatgattttgctccttcggcagttaactgtcgatgaatttgaaatctggc 1044561  T
Q  367 tgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||||    
T  1044560 tgcagttaactgccgaggaaaa 1044539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 14200558 - 14200615
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||    
T  14200558 tcggcagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaac 14200615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 23220671 - 23220732
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||    
T  23220671 ccctttggcagttaactgccgaagttttagaaatacggctgcagttaactgccgatgaaaac 23220732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 46254524 - 46254467
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  46254524 tcggtagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 46254467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 49889640 - 49889737
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| || |||||||| |||  |||||| | | |||||||||||||  ||||||||| |||||| || |||||||||||||||||||||||    
T  49889640 ataaggttgtggcatacgagtaattgatatttttgtctcctcggcagttaactgtcgaagttttagaaatctggttgcagttaactgccgaggaaaac 49889737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 51037544 - 51037487
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||    
T  51037544 tcggcagttaactgccgaagttttagaaatacggctgcaattaactgccgaggaaaac 51037487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 3403840 - 3403900
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||| |||| |  || ||||||||||||||||||||||||||||||||    
T  3403840 cccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 3403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 34530848 - 34530792
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||    
T  34530848 ccttcggcagttaactgtcgaagttttagaaatctggctgcagttaactgccgagga 34530792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 37563421 - 37563299
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccgg 365  Q
    |||||||||||||||  ||||| || ||||| |||||||||||||||| | |||    |||||||||| ||| ||||  |||||||||  ||||| ||||    
T  37563421 tagagaattgctgttcccacatatggtaaggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgtcgaagtttttaggaaa-ccgg 37563323  T
Q  366 ctgcagttaactgccgaggaaaac 389  Q
    | ||||||||||||||||||||||    
T  37563322 cggcagttaactgccgaggaaaac 37563299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 51494987 - 51494875
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||| || ||||||||||||||||||||||| ||||||| ||| | || |   ||||||||||||||||||| | |||||||| | || | ||| ||    
T  51494987 gagaattcctatttacacatttgataaggttgtgtcacacgaataatttacctaaatgcccttcggcagttaactgcagaagttttagtaaactggcggc 51494888  T
Q  370 agttaactgccga 382  Q
    || ||||||||||    
T  51494887 agctaactgccga 51494875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 55793914 - 55793974
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||    
T  55793914 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaac 55793974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 56140765 - 56140685
Alignment:
Q  276 tgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagtttt 355  Q
    |||||||| ||||||||||||||||||||||||| ||||||   || ||||| ||| |||||||||||||||||| |||||    
T  56140765 tgctgtttccacatttgataaggttgtgccacactagtaaaattcgattttgccccctcggcagttaactaccgaggtttt 56140685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 18884586 - 18884523
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||    
T  18884586 tgcccctcggcagttaactgccgaaattttgaaaaaccggctgcagttaactgccgagaaaaac 18884523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 40354654 - 40354599
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||    
T  40354654 cttcggcagttaactgccgaaattttgaaaatccggctgcagttaattgccgagga 40354599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 50447003 - 50447062
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||||||||  |||| |||||||||||||||| ||||||||||    
T  50447003 cttcggcagttaactgccgaagttttaaaaatacggctgcagttaactgtcgaggaaaac 50447062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 56304811 - 56304926
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  ||||||||||||||||| |  |||||||||||  || ||||||||| |||||||||||||  ||| |  ||  ||||| ||||||    
T  56304811 gagaattgttgttcccacatttgataaggttgagaaacacgagtaaaatacatttttgcccatcggcagttaactgtcgaggaattaaaaatctggctgc 56304910  T
Q  370 agttaactgccgagga 385  Q
    |||||| |||||||||    
T  56304911 agttaattgccgagga 56304926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 4980056 - 4979938
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||  ||||||||| | ||||||||||| | |||||||| | || |||||||||||||  ||| | |||  ||| |||||||    
T  4980056 gagaattgttgttgacacattgcataaggttgaggcacacgagtaatttacgtttttcctccctcggcagttaactgtcgacgatttcaaaaaccggctg 4979957  T
Q  369 cagttaactgccgaggaaa 387  Q
    ||||||||||| |||||||    
T  4979956 cagttaactgctgaggaaa 4979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 31242150 - 31242268
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaag-ttttggaaatccggctg 368  Q
    ||||||||||||   ||||||||||  |  |||||||||||||||||| ||     ||||||||||||||||||| |||||| |||| | || ||||| |    
T  31242150 gagaattgctgtgcccacatttgatttgactgtgccacacgagtaaattactcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcgg 31242249  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  31242250 cagttaactgccgaggaaa 31242268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 389
Target Start/End: Complemental strand, 37395316 - 37395210
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacg-tttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    ||||||||||||||||||||||||| ||||||  ||| |||||||||  || ||| ||||||  ||| |  || ||||||||||||||||||| ||||||    
T  37395316 cacatttgataaggttgtgccacactagtaaaatacgatttttgccccctcagcacttaactgtcgaggaatttgaaatccggctgcagttaattgccga 37395217  T
Q  383 ggaaaac 389  Q
    |||||||    
T  37395216 ggaaaac 37395210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 52529147 - 52529267
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggct 367  Q
    |||||||||||||  ||||| || || || |||||||||||||||| | |||    |||||||||| ||| |||| ||||||||||  ||||||| |||     
T  52529147 gagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaatc-ggcg 52529245  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  52529246 gcagttaactgccgaggaaaac 52529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 54634154 - 54634034
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggct 367  Q
    |||||||||||||  ||||| || || || |||||||||||||||| | |||    |||||||||| ||| |||| ||||||||||  ||||| |||||     
T  54634154 gagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggcg 54634056  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  54634055 gcagttaactgccgaggaaaac 54634034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 3183919 - 3184028
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagt 372  Q
    ||||| || ||||||||||||||||| |||||||||||||||  | |  |   || |||||| ||||||||| |||||||||| | || ||||| |||||    
T  3183919 aattgttgcttacacatttgataaggctgtgccacacgagtattttatctaaatgtccttcgacagttaactgccgaagttttagtaaaccggcggcagt 3184018  T
Q  373 taactgccga 382  Q
    ||||||||||    
T  3184019 taactgccga 3184028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 390
Target Start/End: Original strand, 6280791 - 6280912
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||  ||||||||| | ||||||||||| | ||||||||||||| |||||||||||||  | |||  ||  ||| |||||||    
T  6280791 gagaattgttgttgacacattgcataaggttggggcacacgagtaatttacgtttttgccctctcggcagttaactgtcaaagaatttaaaaaccggctg 6280890  T
Q  369 cagttaactgccgaggaaaaca 390  Q
    ||||||| | | ||||||||||    
T  6280891 cagttaaatactgaggaaaaca 6280912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 28084066 - 28084013
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||    
T  28084066 tcggcagataactgccgaagttttagaaatccagctgcagttaactgccgagga 28084013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 6178189 - 6178129
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||    
T  6178189 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaac 6178129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 7485743 - 7485683
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaa 386  Q
    ||||| |||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||    
T  7485743 tgcccctcggcagttaactgtcgaagttttagaaatacggctgcaattaactgccgaggaa 7485683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 21472620 - 21472504
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| |||| |||||||| |||||| || |  |||||||||||  ||||||||||| | ||||||||||||| |||| |  ||  |||  |||||||||    
T  21472620 aattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggctgcag 21472521  T
Q  372 ttaactgccgaggaaaa 388  Q
    |||||||||||||||||    
T  21472520 ttaactgccgaggaaaa 21472504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 41795435 - 41795375
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||    
T  41795435 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaac 41795375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 49094078 - 49094138
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||    
T  49094078 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaac 49094138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 26792383 - 26792264
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttg-gaaatccggctg 368  Q
    |||||||| ||||  |||||||| |  || |||||||||||||||||| ||     |||||||||||| |||||| ||||||||||  | || ||||| |    
T  26792383 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggcaattaactgccgaagtttttagtaaaccggcgg 26792284  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||    
T  26792283 cagttaactgccgaggaaaa 26792264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 37015863 - 37015945
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccga 349  Q
    |||||||||| ||||  ||||||  |||||| ||||||||| ||||||||||| |||||| ||| ||||||||||||| ||||    
T  37015863 tagagaattgttgttcccacattacataaggatgtgccacatgagtaaatgacatttttgccccctcggcagttaactgccga 37015945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 54633776 - 54633866
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaag-ttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  ||||||||| |||| | || ||||| ||||||||||||||||||||||    
T  54633776 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaaggttttaggaaaccggcggcagttaactgccgaggaaaac 54633866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 15995719 - 15995776
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| | |||| |  || |||||||||||||||||||||||||||||||||    
T  15995719 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 15995776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 19069184 - 19069241
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| | |||| |  || |||||||||||||||||||||||||||||||||    
T  19069184 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 19069241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 20208507 - 20208564
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||   | | ||||||||||||||||||||||||||||    
T  20208507 tcggcagttaactgccgaagtttactagaaccggctgcagttaactgccgaggaaaac 20208564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 37880597 - 37880642
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagta 314  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||    
T  37880597 agagaattgctgtttacacattacataaggctgtgccacacgagta 37880642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 40061243 - 40061182
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    ||||| ||||||||||||  |||||||||| |||| |||| ||||||||||| |||||||||    
T  40061243 tgcccatcggcagttaaccgccgaagttttagaaaaccggttgcagttaactaccgaggaaa 40061182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 1087850 - 1087912
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||||||||||||  |||||||||||||  |||||| |||| ||||||||||||||||||||    
T  1087850 tgcccttcggcagtttgctaccgaagtttttaggaaat-cggcggcagttaactgccgaggaaa 1087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 1089693 - 1089603
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  |||||||||||||  ||||| ||||| |||||||| |||||||||||||    
T  1089693 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaaatgccgaggaaaac 1089603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 21018083 - 21018023
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| | ||| ||||| ||| |||||||||| ||||||||||||||||||    
T  21018083 cttcggcagttaactgctgaaattttgaaaaatccggctgcaattaactgccgaggaaaac 21018023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 40358389 - 40358299
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    ||||||||| |||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  40358389 tgtgccacacgagtaaaatacgaaaatgcccttcgacagtttgctaccgaagttttttggaaa-ccggcggcagttaactgccgaggaaaac 40358299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 389
Target Start/End: Complemental strand, 48256618 - 48256587
Alignment:
Q  358 aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||||||||||||    
T  48256618 aaatccggctgcagttaactgccgaggaaaac 48256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 49892481 - 49892418
Alignment:
Q  302 tgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccgg 365  Q
    |||||||||||||| |||||||||||||| ||| ||||||| |   |||||||| |||||||||    
T  49892481 tgccacacgagtaattgacgtttttgcccctcgacagttaaatgttgaagttttagaaatccgg 49892418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 51036494 - 51036557
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||| |||||| ||  ||||||||| ||||| |||||| ||||||||||||||||||||    
T  51036494 tgcccctcgacagttagctgtcgaagttttagaaatacggctgtagttaactgccgaggaaaac 51036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 387
Target Start/End: Complemental strand, 19073706 - 19073676
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||||||||||||||||||||||||||||    
T  19073706 gaaatccggctgcagttaactgccgaggaaa 19073676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 35631163 - 35631217
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||| || |||||  ||||||||||||||||||||||||||||    
T  35631163 tcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactgccgaggaaaac 35631217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 37563055 - 37563119
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||  |||||||||||||  ||||| ||||| ||| ||||||||||||||||||    
T  37563055 tgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcaattaactgccgaggaaaac 37563119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 37855856 - 37855910
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaa 386  Q
    ||||||||||||| ||||| ||||  | | |||||||||||||||||||||||||    
T  37855856 tcggcagttaacttccgaaattttaaagaaccggctgcagttaactgccgaggaa 37855910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 55407843 - 55407813
Alignment:
Q  358 aaatccggctgcagttaactgccgaggaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  55407843 aaatccggctgcagttaactgccgaggaaaa 55407813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 15999875 - 15999818
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||    || |||||||||||||| ||||||||||||||||||    
T  15999875 tcggcagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaac 15999818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 21015736 - 21015793
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||||| ||||| ||| ||||||||||||| |||| ||||    
T  21015736 tcggcagttaactgtcgaagttttagaaatacgggtgcagttaactgctgagggaaac 21015793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 43176708 - 43176647
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||| ||||||||| ||||| ||||  | | || |||||||||||||||||||||||||    
T  43176708 cccttcgacagttaactgccgaaattttaaagaacctgctgcagttaactgccgaggaaaac 43176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 48806481 - 48806538
Alignment:
Q  331 ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||  |||| ||||  | | |||||||||||||||||||||||||||    
T  48806481 ttcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaa 48806538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 49169206 - 49169119
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaa 386  Q
    |||||||||||||||||  |||    || ||||||||||||  |||||||||||||  ||||| ||||| |||||||||||||||||||    
T  49169206 tgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaa 49169119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 37880705 - 37880661
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagta 314  Q
    |||||||| ||||||||||||  |||||| |||||||||||||||    
T  37880705 gagaattgttgtttacacattacataaggctgtgccacacgagta 37880661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 39773368 - 39773458
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||| | |||    || ||||||| ||| |||| ||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  39773368 tgtgccacacgagtaagttacggaaatgtccttcggtagtaaactgccgaagtttttaggaaa-ccggcagcagttaactgccgaggaaaac 39773458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 49563832 - 49563894
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  49563832 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 49563894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 50196992 - 50196936
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    ||||| |||||||||||||||||||||||| ||||   | |||||||||||| ||||    
T  50196992 tgcccctcggcagttaactaccgaagttttagaaaattgactgcagttaactaccga 50196936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 50905210 - 50905150
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaacaat 392  Q
    |||| |||||| | ||||||||||  |||  |||| |||||||||||||||||||||||||    
T  50905210 tcggtagttaattgccgaagttttaaaaaatcggcggcagttaactgccgaggaaaacaat 50905150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 53535983 - 53536043
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||| ||||| || |||||  ||||||||||||||||  ||||||||||    
T  53535983 tgcccttcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactatcgaggaaaac 53536043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 94344 - 94463
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  94344 gagaattgttgtttacacatttgataaggctgtgccacatgagtaaatgacgtttttgcccttcggcagttaactgccgaagttttagaaatccagctgc 94443  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||||| |||||||||||    
T  94444 agttaactaccgaggaaaac 94463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 268 - 385
Target Start/End: Original strand, 49426646 - 49426763
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||  |||||||||| |||||||||||    
T  49426646 tagagaattgctgtttacacatttgataaggctgtaccacacgagtaaatgacgtgttttcccttcggcagttaaccgccgaagttttagaaatccggct 49426745  T
Q  368 gcagttaactgccgagga 385  Q
    ||| ||||||||||||||    
T  49426746 gcaattaactgccgagga 49426763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 46886526 - 46886406
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||    
T  46886526 gagaattgttgtttacacatttgataaggttgtgctacacgagtaaatgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctg 46886427  T
Q  369 cagttaactgccgaggaaaac 389  Q
     |||||| |||||||||||||    
T  46886426 tagttaagtgccgaggaaaac 46886406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 51271707 - 51271610
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  51271707 ataaggttgtgccacacgggtaaatgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcagttaattgccgaggaaaac 51271610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 29765668 - 29765548
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||||||| |||||||| ||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||| ||    
T  29765668 gagaattgttgttcccacattgcataaggttgtaccacacgaataaatgacgtttttgtcccctcggcagttaactgccgaagttttagaaatccggttg 29765569  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  29765568 cagttaactgccgaggaaaac 29765548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 379
Target Start/End: Original strand, 44596793 - 44596905
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  ||||||  |||||  |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||     
T  44596793 tagagaattgttgttcccacattacataagactgtgccacacgagtaaatgacgtttttgcccgctcggcagttaactgccgaagttttagaaatccggt 44596892  T
Q  367 tgcagttaactgc 379  Q
    |||||||||||||    
T  44596893 tgcagttaactgc 44596905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 32161433 - 32161315
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  ||||||  |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||  |||||    
T  32161433 tagagaattgttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggcagttaactaccgaag-tttggaa--ccggc 32161337  T
Q  367 tgcagttaactgccgaggaaaa 388  Q
    ||||||||||| |||| |||||    
T  32161336 tgcagttaactaccgacgaaaa 32161315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 46320592 - 46320482
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||  |||| |||||||    
T  46320592 gagaattgctgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 46320496  T
Q  369 cagttaactgccga 382  Q
    ||||||||| ||||    
T  46320495 cagttaactaccga 46320482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 44599018 - 44598925
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||  |||| |||| | |||||||||||||||||||||||||||||||    
T  44599018 ggttgtgccacacgagtaaatgacatttttgccctctcggcagttacctgtcgaaattttagtaatccggctgcagttaactgccgaggaaaac 44598925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 6562300 - 6562182
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||| ||||||||||||||||||| ||||||  ||| |||| |||  ||||||||||||| |||| |  || ||||||||||||    
T  6562300 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 6562201  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  6562200 cagttaactgccgaggaaa 6562182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 586744 - 586624
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||||  ||| |||| |  || |||||||||||||||||| ||     | ||||||||||||||||| |||||||||| ||||| ||||||    
T  586744 agagaattgctgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctg 586645  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  586644 cagttaactgccgaggaaaac 586624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 385
Target Start/End: Complemental strand, 2425788 - 2425708
Alignment:
Q  305 cacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||| ||  |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  2425788 cacacgagtaaataacccttttacccctcggcagttaactgccgaagttttggaaatccggctgcagttaactgctgagga 2425708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 22524060 - 22524180
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||| | || |   ||||| ||| ||||||| | |||||||||| | || ||||| |    
T  22524060 agagaattgccgtttacacatttcataaggttgtgccacacgagtaatttacctaaatgcccctcgacagttaagtgccgaagttttagtaaaccggcgg 22524159  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||| |||||||||||    
T  22524160 cagttaactcccgaggaaaac 22524180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 18610033 - 18609914
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| |||||||||||||||||||| |||| ||||||| ||  | || |  |||||||| ||||||||||| |||||||||| | || ||||| ||    
T  18610033 gagaattgttgtttacacatttgataaggctgtgtcacacgaatattttacctaattgccctttggcagttaactgccgaagttttagtaaaccggcggc 18609934  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||||| |||||||||||    
T  18609933 agttaactaccgaggaaaac 18609914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 19161883 - 19161946
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  19161883 tgcctttcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaac 19161946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 51288820 - 51288939
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||| ||  |||||||||||||| |||| ||||||| ||| | | ||||||||||  |||||||||||||||||| |  || |||||||||||    
T  51288820 agagaattgctattcccacatttgataaggctgtggcacacgaataatttatgtttttgccccctcggcagttaactaccgaggaattagaaatccggct 51288919  T
Q  368 gcagttaactgccgaggaaa 387  Q
    |||||||||||| |||||||    
T  51288920 gcagttaactgcggaggaaa 51288939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 52805672 - 52805538
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||||||||||||||| ||||| ||||| | |  |||||||||  ||||||||||||| |||| |  || ||||||||||||    
T  52805672 gagaattgatgttcccacatttgataaggttgtggcacacaagtaatttatttttttgccccctcggcagttaactgccgacgaatttgaaatccggctg 52805573  T
Q  369 cagttaactgccgaggaaaacaatattatgcagaca 404  Q
     |||||| ||||||||||||||| ||||||||||||    
T  52805572 tagttaattgccgaggaaaacaa-attatgcagaca 52805538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 26944413 - 26944523
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||||  |||||||    
T  26944413 gagaattgttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctacggcagttaactatcgaag-tttggaa--ccggctg 26944509  T
Q  369 cagttaactgccga 382  Q
    ||||||||| ||||    
T  26944510 cagttaactcccga 26944523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 19914431 - 19914520
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||| ||     ||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  19914431 tgtgccacacgagtaaattactcaaatgcccctcggcagttaacttccgaagttttagaaatacggctgcagttaactgccgaggaaaac 19914520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 30194414 - 30194475
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  30194414 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 30194475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 29438159 - 29438039
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||||||||||||||| ||||||| ||| | ||||||||| ||| ||||||||||||| | ||| | ||  ||| |||||||    
T  29438159 gagaattgttgttcccacatttgataaggttgtggcacacgaataatttacgtttttgccccctcggcagttaactgcagaaatattaaaaaaccggctg 29438060  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||| |||||||||||    
T  29438059 cagttaactaccgaggaaaac 29438039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 50269122 - 50269054
Alignment:
Q  379 ccgaggaaaacaatattatgcagacaagggcaccttttctgaacaaaaacatgcgtaaccctcttctct 447  Q
    ||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||| |||||||||    
T  50269122 ccgaggaaaacaatattatgctgacaatggtactttttctgaacaaaaacatgcgtaacactcttctct 50269054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 20114539 - 20114649
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||| || ||||  |||||||    
T  20114539 gagaattgttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaag-ttgggaa--ccggctg 20114635  T
Q  369 cagttaactgccga 382  Q
    ||||||||| ||||    
T  20114636 cagttaactaccga 20114649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 32160666 - 32160776
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||| |  ||||||  |||||| ||||||||||||||||||| |||||||  |||| ||||||||||||||||||| |||||||  |||||||    
T  32160666 gagaattgctgatcccacattacataaggctgtgccacacgagtaaatgtcgtttttacccctgcggcagttaactaccgaag-tttggaa--ccggctg 32160762  T
Q  369 cagttaactgccga 382  Q
    ||||||||| ||||    
T  32160763 cagttaacttccga 32160776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 253028 - 253113
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttt 354  Q
    |||||||||||||  ||||||  |||||| |||||||||||||||||||||||||||| |||| ||| ||||| ||||||||||||    
T  253028 gagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggtagttatctaccgaagttt 253113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 9711790 - 9711670
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||||||||||||||| ||||| ||||||  ||| ||||| ||| || |||||||||| |||| |  || |||||||||  |    
T  9711790 gagaattgttgttcccacatttgataaggttgtggcacactagtaaaatacgattttgccccatcagcagttaactgccgaggaattagaaatccggtcg 9711691  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  9711690 cagttaactgccgaggaaaac 9711670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 388
Target Start/End: Original strand, 27484993 - 27485112
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  |||||||||||||| || |  |||||||||||  ||||||||| ||| ||||||||||||| || | |  ||  |||||||||||    
T  27484993 gagaattgctgttcccacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgcctaggaattaaaaatccggctg 27485092  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||||||||||||| ||||    
T  27485093 cagttaactgccgagaaaaa 27485112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 384
Target Start/End: Original strand, 30905705 - 30905820
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||| |||||||| |||||||||| ||||||  ||| ||||  ||| ||||||||||||| ||||    || ||||||||||||    
T  30905705 gagaattgctgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttatcccctcggcagttaactgccgagaaatttgaaatccggctg 30905804  T
Q  369 cagttaactgccgagg 384  Q
    ||||||||||||||||    
T  30905805 cagttaactgccgagg 30905820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 382
Target Start/End: Complemental strand, 33206147 - 33206032
Alignment:
Q  265 atctagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatcc 363  Q
    |||| |||||||||||||  ||||||  |||||  ||||||||||||||||||||| |||||  |||| |||||||||| |||||||| |||||||  ||    
T  33206147 atctcgagaattgctgttcccacattacataagactgtgccacacgagtaaatgacatttttacccctgcggcagttaattaccgaag-tttggaa--cc 33206051  T
Q  364 ggctgcagttaactgccga 382  Q
    |||||||||||||| ||||    
T  33206050 ggctgcagttaactaccga 33206032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 388
Target Start/End: Original strand, 44465530 - 44465649
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||| |||||||||||||||| || ||||||  ||| |||| |||  |||||||||||||||||| |  || ||| ||||||||    
T  44465530 gagaattgttgttcccacatgtgataaggttgtgccatactagtaaaatacgattttaccccctcggcagttaactaccgaggaatttgaattccggctg 44465629  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||| ||||||||||||||    
T  44465630 cagtttactgccgaggaaaa 44465649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 253392 - 253306
Alignment:
Q  294 taaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    ||||| ||||||||||||||||||||| |||||| |||| ||| ||||||||||||||| |||||||  |||||||||||||||| ||||    
T  253392 taaggctgtgccacacgagtaaatgacatttttgcccctgcggtagttaactaccgaag-tttggaa--ccggctgcagttaactaccga 253306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 23913791 - 23913909
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||| ||||||||||||||||||| ||||||  ||| |||| |||  || ||||||||||||||| |  || ||| ||||||||    
T  23913791 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcagcagttaactaccgaggaatttgaattccggctg 23913890  T
Q  369 cagttaactgccgaggaaa 387  Q
    ||||||||||| |||||||    
T  23913891 cagttaactgctgaggaaa 23913909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 49429213 - 49429155
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||    
T  49429213 cttcggcagttaactgccgaagttttagaaatccggctgcagttagttgccgaggaaaa 49429155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 4883234 - 4883287
Alignment:
Q  336 cagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  4883234 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 4883287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 46319680 - 46319769
Alignment:
Q  266 tctagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttt 354  Q
    |||||||||||| ||||  ||||||  ||| || ||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||    
T  46319680 tctagagaattgttgttcccacattacatatggctgtgccacacgagtaaatgacgtttttgttcctgcggtagttaactaccgaagttt 46319769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 48228381 - 48228328
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  48228381 ccttcggcagttaactgccgaagttttagaaatctggctgcagttaactgccga 48228328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 13636201 - 13636141
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||    
T  13636201 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaac 13636141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 20349454 - 20349510
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    |||||||||||||||||| |  || ||||||||||||||||||||||||||||||||    
T  20349454 tcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 20349510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 23276247 - 23276127
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| || |||||||||||| || |  |||||||||||  ||||||||||||  ||||||||||||| | || |  ||  ||||||||||     
T  23276247 gagaattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggcta 23276148  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  23276147 cagttaactgccgaggaaaac 23276127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 36076693 - 36076577
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagt 372  Q
    |||||||||| |||||||| |||||| || |  |||| ||||||  |||||||  |||||||| ||||||| ||||| |  ||  ||| |||||||||||    
T  36076693 aattgctgttgacacatttcataaggctgagaaacacaagtaaaatacgttttaccccttcggtagttaaccaccgaggaattcaaaaaccggctgcagt 36076594  T
Q  373 taactgccgaggaaaac 389  Q
    |||||||||||||||||    
T  36076593 taactgccgaggaaaac 36076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 52802116 - 52802184
Alignment:
Q  322 tttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||| ||||||||||||| |||| |  || |||||||||||||||||||||||||||||||||    
T  52802116 tttttgccctctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 52802184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 382
Target Start/End: Complemental strand, 98060 - 97949
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgca 370  Q
    ||||||| |||||||||||||||||||| |||||||||||||||  | || |   ||| ||||  ||||||||| |||||||||| | ||  |||| |||    
T  98060 agaattgttgtttacacatttgataaggctgtgccacacgagtattttacctaaatgctcttcaacagttaactgccgaagttttagtaaatcggcggca 97961  T
Q  371 gttaactgccga 382  Q
    ||||||||||||    
T  97960 gttaactgccga 97949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 21144743 - 21144610
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  |||||||||||||||| || ||||||| ||| | ||||||||||   ||||||||||||| |  | |  || ||| |||||| ||    
T  21144743 gagaattgttgttcccacatttgataaggttctggcacacgactaatttacgtttttgcttctcggcagttaactgcgaaggaattagaattccggcggc 21144644  T
Q  370 agttaactgccgaggaaaacaatattatgcagaca 404  Q
    |||||| ||||||||||||||| |||||| |||||    
T  21144643 agttaagtgccgaggaaaacaa-attatgaagaca 21144610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 49924790 - 49924908
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||  |||||| || | ||||||||||| | ||||||||| |||||||||| |||||| |||||   ||  ||| ||||||     
T  49924790 gagaattgttgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccccttcggcaattaactgccgaaaaattcaaaaaccggcta 49924889  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  49924890 cagttaactgccgaggaaa 49924908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 50117957 - 50117895
Alignment:
Q  265 atctagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg 327  Q
    |||| |||||||||||||  ||||||  |||||||||||||||||||||||||||| ||||||    
T  50117957 atcttgagaattgctgttcccacattacataaggttgtgccacacgagtaaatgacatttttg 50117895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 11183119 - 11183240
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| |||| ||||||||||||||| || |  | |||||||||  |||||||||| || | | ||||||||| | || |  ||  ||||||||||    
T  11183119 agagaattgttgttgacacatttgataaggctgagaaatacgagtaaaatacgtttttgctcccttgacagttaactgctgaggaattaaaaatccggct 11183218  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  11183219 gcagttaactgccgaggaaaac 11183240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 41804169 - 41804052
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| |||| |||||||| |||||| || | ||||| ||||||  ||| |||||||| |||||||||||||| |||| |  ||  ||| ||| ||||||    
T  41804169 aattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgactgcag 41804070  T
Q  372 ttaactgccgaggaaaac 389  Q
    ||||||||||||||||||    
T  41804069 ttaactgccgaggaaaac 41804052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 44336187 - 44336303
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  |||||||||||||||| || ||||||||||  |    ||||| |||||| ||||||||||  ||| |  || ||||| |||||||    
T  44336187 gagaattgttgttcccacatttgataaggttatgacacacgagtatttt---ttttttcccttcagcagttaactgtcgaggaattagaaattcggctgc 44336283  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  44336284 agttaactgccgaggaaaac 44336303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 44470087 - 44470030
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||| |  || |||||||||||||||||||||||||||||||||    
T  44470087 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 44470030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 471202 - 471122
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccga 349  Q
    |||||||| ||||  ||||||  ||||||||||||||| || |||||||||||||||| ||| ||||||||||||| ||||    
T  471202 gagaattgttgttcccacattacataaggttgtgccacgcgggtaaatgacgtttttgccccatcggcagttaactgccga 471122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 8548778 - 8548688
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  8548778 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 8548688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 15354697 - 15354641
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt 326  Q
    |||||||||||||  ||||||  ||||||||||| ||||||||||||||||||||||    
T  15354697 gagaattgctgttcccacattacataaggttgtgtcacacgagtaaatgacgttttt 15354641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 19159617 - 19159677
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||||||||| ||||||||    
T  19159617 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccaaggaaaac 19159677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 2365199 - 2365254
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt 355  Q
    ||||||||||||||||||||| |   ||||||||||||||||||| ||||||||||    
T  2365199 tgtgccacacgagtaaatgacctaaatgcccttcggcagttaactgccgaagtttt 2365254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 29424371 - 29424434
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| | |||||||||   ||| |||||||||||||||| |||||||||||    
T  29424371 tgcccttcggcagttaattgccgaagtttaaaaaaaccggctgcagttaactaccgaggaaaac 29424434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 15047279 - 15047333
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaa 386  Q
    ||||||||||||| |||| |  || ||||||||||||||||||||||||||||||    
T  15047279 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaa 15047333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 22397812 - 22397870
Alignment:
Q  328 cccttcggcagttaactaccgaagttttg-gaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||||||| ||||||||||| | || ||||| ||||||||||||||||||    
T  22397812 cccttcggcagttaactgccgaagttttgagtaaaccggcggcagttaactgccgagga 22397870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 328
Target Start/End: Complemental strand, 27487775 - 27487717
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc 328  Q
    |||||||| ||||  ||||||||||||||||||| ||||||||||| | ||||||||||    
T  27487775 gagaattgatgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgc 27487717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 389
Target Start/End: Complemental strand, 49661794 - 49661752
Alignment:
Q  347 cgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  49661794 cgaagttttagaaatacggctgcagttaactgccgaggaaaac 49661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 15051460 - 15051367
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagt-tttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||| ||||||||||||  |||    |||||||||||||||  |||||||||| ||| | || ||||| ||||||||||||||||||||||    
T  15051460 ggttgtgtcacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtatttagtaaaccggcggcagttaactgccgaggaaaac 15051367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 30910079 - 30910022
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||| |  || |||||||||||||||||||||||||||||||||    
T  30910079 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaac 30910022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 6557912 - 6557968
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||| |||| |  || ||||| ||||||||||||||||||||||||||    
T  6557912 tcggcagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaa 6557968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 388
Target Start/End: Complemental strand, 8460236 - 8460117
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||||||| |||||||  |||||| || | |||| ||||||   ||||||||| ||| |||| ||||||| ||||| |  || |||||| ||||    
T  8460236 agagaattgctgttgacacattctataaggctgaggcacatgagtaatatacgtttttgtcccctcggtagttaacaaccgaggaatttgaaatc-ggct 8460138  T
Q  368 gcagttaactgccgaggaaaa 388  Q
    ||||||||||||| |||||||    
T  8460137 gcagttaactgccaaggaaaa 8460117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 389
Target Start/End: Original strand, 9710600 - 9710632
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||||||||||||    
T  9710600 gaaatccggctgcagttaactgccgaggaaaac 9710632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 21699818 - 21699938
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| ||||||||||| |||||||| |||||||||| | ||  | || |   | ||||||   |||||||| |||||||||| | || ||||| |    
T  21699818 agagaattgttgtttacacatatgataaggctgtgccacacaaatattttacctaaattcccttcaatagttaactgccgaagttttagtaaaccggcgg 21699917  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||| |||||||||||    
T  21699918 cagttaactaccgaggaaaac 21699938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 29622533 - 29622443
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaag--ttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  |||||||||  ||||||||| ||||| |||||||| |||||||||||||    
T  29622533 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagttttttggaaa-ccggcggcagttaattgccgaggaaaac 29622443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 384
Target Start/End: Original strand, 36908515 - 36908627
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| |||| |||||||| |||||| || | ||||| ||||||  || |||||||| | |||||||||||||  |||||  ||  ||| ||||||||||    
T  36908515 aattgatgttgacacattttataaggatgaggcacacaagtaaaatacatttttgcctcctcggcagttaactgtcgaagaattcaaaaaccggctgcag 36908614  T
Q  372 ttaactgccgagg 384  Q
    |||||||||||||    
T  36908615 ttaactgccgagg 36908627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 41453835 - 41453891
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    |||| |||||||| |||| |  || ||||||||||||||||||||||||||||||||    
T  41453835 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 41453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 19495089 - 19495133
Alignment:
Q  358 aaatccggctgcagttaactgccgaggaaaacaatattatgcagaca 404  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||    
T  19495089 aaatccggctgcagttaactgccgagaaaaac--tattatgcagaca 19495133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 404
Target Start/End: Complemental strand, 22346063 - 22346023
Alignment:
Q  362 ccggctgcagttaactgccgaggaaaacaatattatgcagaca 404  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  22346063 ccggctgcagttaactgccgaggaaaaca--attatgcagaca 22346023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 392
Target Start/End: Complemental strand, 4518435 - 4518405
Alignment:
Q  362 ccggctgcagttaactgccgaggaaaacaat 392  Q
    |||||||||||||||||||||||||||||||    
T  4518435 ccggctgcagttaactgccgaggaaaacaat 4518405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 8473747 - 8473801
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttt 354  Q
    |||||||||||||||||  |||    |||||||||||||||||||||||||||||    
T  8473747 tgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagttt 8473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 391
Target Start/End: Original strand, 16281750 - 16281780
Alignment:
Q  361 tccggctgcagttaactgccgaggaaaacaa 391  Q
    |||||||||||||||||||||||||||||||    
T  16281750 tccggctgcagttaactgccgaggaaaacaa 16281780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 26607514 - 26607456
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    ||||| ||||||||||||| ||||| || |||||  ||||||||||||||||||||||||||    
T  26607514 tgcccctcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactgccgaggaaa 26607456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 26879378 - 26879314
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||  |||||||||||||  || || ||||| ||||||||||||||||||||||    
T  26879378 tgcccttcggcagtttgctaccgaagtttttaggcaa-ccggcggcagttaactgccgaggaaaac 26879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 50344044 - 50343994
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    ||||||||||||| |||||||||| |||| ||||| |||||||||| ||||    
T  50344044 tcggcagttaactgccgaagttttagaaaaccggcggcagttaactcccga 50343994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 22345195 - 22345307
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||| || |||||||  ||||||| | | ||||||||||| | ||||||||   || ||||||||||||| |||| |  || |||| |||||||    
T  22345195 gagaattgctattgacacattctataaggtcggggcacacgagtaatttacgtttttattccatcggcagttaactgccgaggaatttgaaa-ccggctg 22345293  T
Q  369 cagttaactgccga 382  Q
    ||||||||||||||    
T  22345294 cagttaactgccga 22345307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 23359425 - 23359368
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| | |||| |  || ||||||||||||||||||||| |||||||||||    
T  23359425 tcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaac 23359368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 46141752 - 46141837
Alignment:
Q  306 acacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaaca 390  Q
    |||| ||||||  ||| ||||||||| ||||||||||||| |||| |  ||  | | |||||||||||||||||||||||||||||    
T  46141752 acacaagtaaaatacgattttgccctctcggcagttaactgccgaggaattcaataaccggctgcagttaactgccgaggaaaaca 46141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 389
Target Start/End: Original strand, 46973141 - 46973258
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| |||| |||||||| || ||| || | ||||| ||||||  ||| ||||||||  | ||||||||||| |||| |  ||  ||| ||||||||||    
T  46973141 aattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaaccggctgcag 46973240  T
Q  372 ttaactgccgaggaaaac 389  Q
    ||||||||||||||||||    
T  46973241 ttaactgccgaggaaaac 46973258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 51290036 - 51289979
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| || |  ||  |||||||| |||||||||||||||||||||||    
T  51290036 tcggcagttaactactgaggaattaaaaatccggttgcagttaactgccgaggaaaac 51289979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 3728699 - 3728789
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    ||| |||||||||||  |||||||||||||  || || ||||| ||||||||||||||||||||||    
T  3728699 tgtgccacacgagtaaaatacgaaaatgctcttcggcagtttgctaccgaagtttttaggcaa-ccggcggcagttaactgccgaggaaaac 3728789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 3943966 - 3944028
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  3943966 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 3944028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 15696813 - 15696753
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| ||||||||| ||||| || |||||  |||||||||||||||| |||||||||||    
T  15696813 tgcccttcgacagttaactgccgaa-ttatggaa--ccggctgcagttaactaccgaggaaaac 15696753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 26875683 - 26875747
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttg-gaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||| ||||||||||  |  | ||||| |||| |||||||||||||||||    
T  26875683 tgcccttcggcagttaactgccgaagtttttagtgaaccggcggcagctaactgccgaggaaaac 26875747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Original strand, 29352281 - 29352313
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| |||||||||||||||||||||    
T  29352281 gaaatccggctccagttaactgccgaggaaaac 29352313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 38771621 - 38771683
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  38771621 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 38771683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 49927616 - 49927532
Alignment:
Q  306 acacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||  ||||||||| ||| ||||||||||||| ||||||  ||  ||| ||||||  |||||||||||||| |||||    
T  49927616 acacgagtaaaatacgtttttgtcccctcggcagttaactgccgaagaatttaaaaaccggctatagttaactgccgagaaaaac 49927532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 392
Target Start/End: Complemental strand, 51666774 - 51666655
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| |||| |||||||  |||| | |||| ||||||||||||  ||| ||||| ||| ||||||||||| | ||||    || ||||| |||||||||    
T  51666774 aattgatgttgacacattgcataaagctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgagtaattcgaaat-cggctgcag 51666676  T
Q  372 ttaactgccgaggaaaacaat 392  Q
    |||||||| ||||||||||||    
T  51666675 ttaactgctgaggaaaacaat 51666655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 270 - 390
Target Start/End: Complemental strand, 14012513 - 14012393
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| |    
T  14012513 gagaattgttgttcccacatttaataaggctgtgccacacgagtaaatgacgtttttgcccttcagcagttaactgccgaagttttagaaatccggcttc 14012414  T
Q  370 agttaactgccgaggaaaaca 390  Q
    |||||||||||||||||||||    
T  14012413 agttaactgccgaggaaaaca 14012393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 3502776 - 3502659
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||| |||||  ||||||||||| ||||||| ||||    
T  3502776 gagaattgctatttacacatttcataaggttgtgtcacacgagtaaatgacgtttttgctcttcagcaattaacggccgaagttttgaaaatccgactgc 3502677  T
Q  370 agttaactgccgaggaaa 387  Q
    |||||||||| |||||||    
T  3502676 agttaactgctgaggaaa 3502659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 29076439 - 29076342
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| |||| ||||| ||||| |||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||    
T  29076439 ataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaac 29076342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 29109972 - 29109875
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| |||| ||||| ||||| |||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||    
T  29109972 ataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaac 29109875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 29111412 - 29111315
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| |||| ||||| ||||| |||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||    
T  29111412 ataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaac 29111315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 11687393 - 11687503
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||||  |||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||   ||| |||||||    
T  11687393 gagaattgctgttcccacattatataaagttgtgccacacgagtaaatgacgtttttacccctgcggcagttaactaccgaagttt---aaaaccggctg 11687489  T
Q  369 cagttaactgccga 382  Q
    ||||||||| ||||    
T  11687490 cagttaactcccga 11687503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 15888879 - 15888819
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  15888879 ccttcggcagttaactaccgaagttttagaaaaccggctgcagttaactgccgaggaaaac 15888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 3501086 - 3501201
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||||||||||||||||||||||||| | |||||||||||||  | ||||   |||||||||||||||||||  ||||||||| | || || || ||    
T  3501086 gagaattgctgtttacacatttgataaggctctgccacacgagtattttacgtaaatgcccttcggcagttaactgtcgaagttttagtaaaccagcggc 3501185  T
Q  370 agttaactgccgagga 385  Q
    |||||||| |||||||    
T  3501186 agttaactaccgagga 3501201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 28362874 - 28362750
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcag---ttaactaccgaagttttggaaatccg 364  Q
    ||||||||||| ||  ||||||  |||||| ||||||||||||||||||||||||||| |||  |||||||   |||||| |||| |  || ||||||||    
T  28362874 agagaattgctattcccacattacataaggctgtgccacacgagtaaatgacgtttttaccccgtcggcagcagttaactgccgaggaatttgaaatccg 28362775  T
Q  365 gctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||||    
T  28362774 gctgcagttaactgccgaggaaaac 28362750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 11688031 - 11687946
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttt 354  Q
    |||||||||||||  ||||||  |||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  11688031 gagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttacccctgcggcagttaactaccgaagttt 11687946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 11840390 - 11840269
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  ||||||  |||||| |||| ||||||||||| ||| ||||||||||  | || |||||||| |||||||||| ||||| |||||    
T  11840390 agagaattgttgttcccacattgcataaggctgtgacacacgagtaattgatgtttttgcccccttggtagttaactgccgaagttttagaaattcggct 11840291  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||| ||||||||||    
T  11840290 gcagttaactgtcgaggaaaac 11840269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 403
Target Start/End: Complemental strand, 31151142 - 31151044
Alignment:
Q  305 cacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaacaatattatgcagac 403  Q
    ||||||||||  | ||||||||||| | |||||||||||||  |||| |||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  31151142 cacacgagtattttacgtttttgcctcctcggcagttaactgtcgaaatttttgaaatccggctgcagttaactgccaaggaaaacaa-attatgcagac 31151044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 7361125 - 7361243
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||| |||||||  |||||| |||| ||||||||||| | ||||||||| ||| |||||| |||||| | || | |||  ||| |||||||    
T  7361125 gagaattgctgttgacacattgcataaggctgtggcacacgagtaatttacgtttttgtcccgtcggcaattaactgctgaggattttaaaaaccggctg 7361224  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  7361225 cagttaactgccgaggaaa 7361243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 2109514 - 2109571
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  2109514 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 2109571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 31768687 - 31768807
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  |||||||||||||| ||||  |||||||||| | || |||||||||  ||||||||||||| |||| |  ||  |||||||||||    
T  31768687 gagaattgttgttcccacatttgataaggctgtgtaacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattaaaaatccggctg 31768786  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||| |||||||||||||    
T  31768787 cagttaattgccgaggaaaac 31768807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 6761010 - 6760891
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||  |||||||| |  || |||||||||||||||||| ||     ||||| | || |||||||| |||||||||| ||||| |||||||    
T  6761010 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgccccttggtagttaactgccgaagttttagaaatacggctgc 6760911  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||| |||||||||||||    
T  6760910 agttaattgccgaggaaaac 6760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 2050962 - 2051082
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||| || |||||||  |||||| ||   ||||||||||||  |||||||||| |||||||||||||||| |||| |  || |||| |||| |    
T  2050962 agagaattgctattgacacattgcataaggctgatgcacacgagtaaaatacgtttttgctccttcggcagttaactgccgatgaatttgaaa-ccggtt 2051060  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  2051061 gcagttaactgccgaggaaaac 2051082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 25554702 - 25554759
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||    
T  25554702 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgcctaggaaaac 25554759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 22305102 - 22305162
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||    
T  22305102 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaac 22305162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 117974 - 117911
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccctt 332  Q
    ||||||||| ||||  ||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  117974 agagaattgatgttcccacatttgataaggttgtgtcacacgagtaatttacgtttttgccctt 117911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 9048066 - 9048129
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||| |||||||||   ||| |||||||||||||||| |||||||||||    
T  9048066 tgcccttcggcagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaggaaaac 9048129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 26349910 - 26350028
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| | |||||| |||  ||||||||||| ||||||||||  | |||    ||| ||||||||||||||| ||||||||| | ||| ||||| ||    
T  26349910 gagaattgttatttacatattgcataaggttgtgtcacacgagtattttacgaaaatgctcttcggcagttaactgccgaagtttagtaaa-ccggcggc 26350008  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  26350009 agttaactgccgaggaaaac 26350028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 6204821 - 6204881
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||    
T  6204821 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaac 6204881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 29061230 - 29061346
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||| ||||||||||| | || |||||||||  ||||||||||||| |||| |  || ||||| ||||||    
T  29061230 gagaattggtgttcccacattacataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaattcggctg 29061329  T
Q  369 cagttaactgccgagga 385  Q
    ||||||||| |||||||    
T  29061330 cagttaacttccgagga 29061346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 377
Target Start/End: Original strand, 29065674 - 29065782
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||| ||||||||||| | || |||||||||  ||||||||||||| |||| |  || ||||||||||||    
T  29065674 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29065773  T
Q  369 cagttaact 377  Q
    |||||||||    
T  29065774 cagttaact 29065782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 377
Target Start/End: Original strand, 29074687 - 29074795
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||| ||||||||||| | || |||||||||  ||||||||||||| |||| |  || ||||||||||||    
T  29074687 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29074786  T
Q  369 cagttaact 377  Q
    |||||||||    
T  29074787 cagttaact 29074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 377
Target Start/End: Original strand, 29079451 - 29079559
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||| ||||||||||| | || |||||||||  ||||||||||||| |||| |  || ||||||||||||    
T  29079451 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29079550  T
Q  369 cagttaact 377  Q
    |||||||||    
T  29079551 cagttaact 29079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 377
Target Start/End: Original strand, 29107260 - 29107368
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||| |||| ||||||||||| | || |||||||||  ||||||||||||| |||| |  || ||||||||||||    
T  29107260 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29107359  T
Q  369 cagttaact 377  Q
    |||||||||    
T  29107360 cagttaact 29107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 9049166 - 9049103
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| ||||||||| |||||||||   ||| |||||||||||||||| |||||||||||    
T  9049166 tgcccttcgacagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaggaaaac 9049103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 391
Target Start/End: Complemental strand, 18610321 - 18610223
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaacaa 391  Q
    |||||| |||| ||||||||||||  |||||||||||| ||||| |||||| | |||| |  || |||| ||||||||| ||||||||||||||||||||    
T  18610321 ataaggctgtgtcacacgagtaaaatacgtttttgccccttcggtagttaaatgccgaggaatttgaaa-ccggctgcatttaactgccgaggaaaacaa 18610223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 29097932 - 29097847
Alignment:
Q  305 cacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| |||||| ||||  || |||||| ||||||  |||| |||| ||||||||||||||||||||||| ||| |||||    
T  29097932 cacacgagtaattgacgtatttgttctctcggcaattaactgtcgaaattttagaaatccggctgcagttaactgctgagaaaaac 29097847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 117252 - 117312
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||| ||||| || |||||  ||||||||||||||||||||||||||||    
T  117252 tgcccctcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactgccgaggaaaac 117312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 11691788 - 11691848
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| |||    ||||||||||||||||||||||||||||||||    
T  11691788 cttcggcagttaactgccgaaatttgctcaaatccggctgcagttaactgccgaggaaaac 11691848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 18347038 - 18347094
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||| |||| |  |  ||||||||||||||||||||||||||||||||    
T  18347038 tcggcagttaactgccgaggaatctgaaatccggctgcagttaactgccgaggaaaa 18347094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 26422915 - 26422959
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagta 314  Q
    |||||||| |||||||| ||||||||||||||||| |||||||||    
T  26422915 gagaattgttgtttacatatttgataaggttgtgctacacgagta 26422959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 26351234 - 26351115
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||| |||||||| ||||  |||||  |||||||||||||||  | |||    || | |||| |||||||||  ||||||||| | || ||||| ||    
T  26351234 gagaattactgtttacgcattacataagactgtgccacacgagtactttacgaaaatgtcattcgacagttaactgtcgaagttttagtaaaccggcggc 26351135  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  26351134 agttaactgccgaggaaaac 26351115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 31146373 - 31146428
Alignment:
Q  335 gcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaaca 390  Q
    |||||||||| |||| |  || |||||||||||||||||||||| |||||||||||    
T  31146373 gcagttaactgccgaggaatttgaaatccggctgcagttaactgtcgaggaaaaca 31146428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 31771792 - 31771761
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||||||||||||||||||||||    
T  31771792 gaaatccggctgcagttaactgccgaggaaaa 31771761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 32691085 - 32691198
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggct 367  Q
    |||||||| ||||  |||||||| |  ||||||||||||| ||||||| |||    ||||| ||| ||||||||| ||||||||||  |||||| ||||     
T  32691085 gagaattgttgttcccacatttggtttggttgtgccacacaagtaaattacgcaaatgcccctcgacagttaactgccgaagtttttaggaaat-cggcg 32691183  T
Q  368 gcagttaactgccga 382  Q
    |||||||||||||||    
T  32691184 gcagttaactgccga 32691198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 26712038 - 26712102
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||| ||| |||| ||||||||||  ||||||| ||| ||||||||||||||||||||||    
T  26712038 tgcccttcggtagtaaactgccgaagtttttaggaaatc-ggcggcagttaactgccgaggaaaac 26712102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 27616705 - 27616769
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||| ||||||    
T  27616705 tgcccttcggcagtttgctaccgaagttttaaggaaa-ccggcggcagttaactgccgaagaaaac 27616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 30829763 - 30829706
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttt 354  Q
    ||||||||||||||||||||  |||    ||||||||| |||||||||||||||||||    
T  30829763 ggttgtgccacacgagtaaaatacgaaaatgcccttcgacagttaactaccgaagttt 30829706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 17594250 - 17594290
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacga 311  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  17594250 agaattggtgttgacacatttgataaggttgagccacacga 17594290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 26712304 - 26712242
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||| |||||||||  ||||| ||||| ||||||||||||||||||||||    
T  26712304 cccttcggcagtttgctaacgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 26712242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 22551003 - 22550884
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| | || |   ||||||||||||||||||| |||||||||| |||||||||||||    
T  22551003 gagaattgttgtttacacatttgataaggctgtgccacacgagtaatttacctaaatgcccttcggcagttaactgccgaagttttagaaatccggctgc 22550904  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  22550903 agttaactgccgaggaaaac 22550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 39601638 - 39601758
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||| ||  ||||||  |||||| ||||||||||||||||||||||||||| || | ||| ||||||||| |||||||||| ||||||||||||    
T  39601638 gagaattgctattcccacattacataaggctgtgccacacgagtaaatgacgtttttaccttctcgacagttaactgccgaagttttagaaatccggctg 39601737  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  39601738 cagttaactgccgaggaaaac 39601758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 41250211 - 41250091
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| ||||  ||||||  ||||||||||| ||||||||||| |||||||||||||| |||| ||||||||  ||||||||| |||||||| |||    
T  41250211 agagaattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgcccctcggtagttaactgtcgaagttttagaaatccgactg 41250112  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||| |||||||||||||||    
T  41250111 cagtttactgccgaggaaaac 41250091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 34235261 - 34235143
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||| ||   ||||||||||||| |||||||||| ||||| |||||     
T  34235261 gagaattgctgtttacacatttgataaggctgtgc-atacgagtaaatgacgtttttacctactcggcagttaactgccgaagttttagaaattcggcta 34235163  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||||||||| ||||||||    
T  34235162 cagttaactgctgaggaaaa 34235143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 34366846 - 34366965
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  ||||||  |||||| ||||||||||||||||| ||| ||||||||| ||| ||||||||| ||||||||||  ||||||||||||    
T  34366846 gagaattgatgttcccacattacataaggctgtgccacacgagtaaaagacctttttgcccctcgtcagttaactgccgaagttttataaatccggctgc 34366945  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||||| |||||||||||    
T  34366946 agttaacttccgaggaaaac 34366965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 10749814 - 10749693
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |  | |||    ||||||||||||||||||| |||||||||| | || || ||     
T  10749814 tagagaattgctgtttacacattacataaggttgtgccacacgagaactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccagcg 10749715  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  10749714 gcagttaactgccgaggaaaac 10749693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 39939356 - 39939234
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||  ||||  ||||||  |||||| |||| |||||||||||||||||||||||| || ||| ||||||| |  ||||||||| ||||||||||    
T  39939356 tagagaattattgttcccacattacataaggatgtgtcacacgagtaaatgacgtttttgctccctcgacagttaattgtcgaagttttagaaatccggc 39939257  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
    |||||||||||||| ||||||||    
T  39939256 tgcagttaactgccaaggaaaac 39939234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 546525 - 546440
Alignment:
Q  304 ccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||| |||||   |||||||||||||||||||    
T  546525 ccacacgagtaaatgacgtttttgcccttcgacaattaactgccgaagttttagaaattcggctattgttaactgccgaggaaaac 546440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 2335256 - 2335167
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||| ||     ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  2335256 tgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaac 2335167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 545869 - 545948
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccga 349  Q
    |||||||| |||||||||||||||||||| ||||||||| | |||||||||||||||| |||||| ||||||||| ||||    
T  545869 gagaattgttgtttacacatttgataaggctgtgccacatgtgtaaatgacgtttttgtccttcgacagttaactgccga 545948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 28617503 - 28617622
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||  ||| |||| |  || |||||||||||||||||| ||     | ||||||||||||||||| |||||||||| ||||| |||||||    
T  28617503 gagaattgctgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgc 28617602  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  28617603 agttaactgccgaggaaaac 28617622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 45409806 - 45409925
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||||||||||  |||||| |||||||||||||||  | |||    ||||||||||||||||||| |||||||||| | ||  |||| ||    
T  45409806 gagaattgctgtttacacattacataaggctgtgccacacgagtactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaatcggcggc 45409905  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||    
T  45409906 agttaactgccgaggcaaac 45409925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 7577727 - 7577617
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||||  |||||| |||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||  |||| |||||||    
T  7577727 gagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttacccctgcggcaattaactaccgaagttt--gaaa-ccggctg 7577631  T
Q  369 cagttaactgccga 382  Q
    ||||||||| ||||    
T  7577630 cagttaactaccga 7577617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 34234515 - 34234573
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt 326  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34234515 tagagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgttttt 34234573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 27501597 - 27501654
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  27501597 tcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaac 27501654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 22547460 - 22547519
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  22547460 tgcccttcggcagttaactgccgaagttttagaaatccggctgcagttaactaccgagga 22547519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 382
Target Start/End: Complemental strand, 27704670 - 27704559
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||||||  ||||||  |||||| |||||||||||| ||||||||||||||  |||| | ||||||||||||||||||||  |||| ||||||    
T  27704670 agagaattgctgttcccacattacataaggctgtgccacacgaataaatgacgtttttacccctgcagcagttaactaccgaagttt--gaaa-ccggct 27704574  T
Q  368 gcagttaactgccga 382  Q
    |||||||||| ||||    
T  27704573 gcagttaactaccga 27704559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 44933850 - 44933913
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  44933850 tgcccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 44933913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 43262357 - 43262475
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  ||||||  |||||| |||||||||||||||||||||||||||  ||| |||||    |||| |||| || || ||||||| ||    
T  43262357 tagagaattgttgttctcacattacataaggctgtgccacacgagtaaatgacgtttttaccccctcggc----aacttccgaggtatttgaaatccagc 43262452  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||    
T  43262453 tgcagttaactgccgaggaaaac 43262475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 44052366 - 44052245
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  ||||||  ||||||||||| ||||||||||||||||||||||| ||| |||| |||||| | |||| |  || | |||||||||    
T  44052366 agagaattgttgttcccacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtagttaattgccgaggaatttgcaatccggct 44052267  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||| || |||||||||||    
T  44052266 gcagttacctaccgaggaaaac 44052245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 5533164 - 5533044
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| ||||  ||| ||||||  || |||||||||||||||||| ||     | ||| || |||||||||| |||||||||| ||||| ||||||    
T  5533164 agagaattgttgttcccacttttgatttggctgtgccacacgagtaaattactcaaatacccctcagcagttaactgccgaagttttagaaatacggctg 5533065  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  5533064 cagttaactgccgaggaaaac 5533044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 1114676 - 1114795
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  ||||| |||||||| |||||||||| ||||||  ||| |||| |||  ||||||||||||| ||||    || |||||||||||    
T  1114676 agagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgccgagaaatttgaaatccggct 1114775  T
Q  368 gcagttaactgccgaggaaa 387  Q
    ||||||||||||||||||||    
T  1114776 gcagttaactgccgaggaaa 1114795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 41016405 - 41016468
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||| |||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  41016405 tgcccctcgacagttaactaccgaagttttagaaatccaactgcagttaactgccgaggaaaac 41016468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 7577050 - 7577160
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||||  |||||| ||||||||| |||||||||||||||||  |||| || |||||||||||||||| |||||||  |||||||    
T  7577050 gagaattgctgttcccacattacataaggctgtgccacatgagtaaatgacgtttttacccctgcgacagttaactaccgaag-tttggaa--ccggctg 7577146  T
Q  369 cagttaactgccga 382  Q
    || |||||| ||||    
T  7577147 caattaactcccga 7577160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 27703995 - 27704105
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgttttt-gcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||||  |||||| |||||||||| | ||||||||||||||  |||| ||||||||||||||||||| |||||||  |||||||    
T  27703995 gagaattgctgttcccacattacataaggctgtgccacacaaataaatgacgtttttacccctgcggcagttaactaccgaag-tttggaa--ccggctg 27704091  T
Q  369 cagttaactgccga 382  Q
    || |||||| ||||    
T  27704092 caattaactcccga 27704105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 34371986 - 34371872
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| |||||||||||||||||||||| | |||||| ||||| | |  |   |||||||| |||||||||| |||||||||| | || |||||     
T  34371986 tagagaattgttgtttacacatttgataaggttcttccacacaagtaatttatctaaatgcccttcagcagttaactgccgaagttttagtaaaccggcg 34371887  T
Q  368 gcagttaactgccga 382  Q
    ||||| |||||||||    
T  34371886 gcagtaaactgccga 34371872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 386
Target Start/End: Original strand, 45454339 - 45454457
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  |||||||||||||  |||| ||||| ||||||  ||| ||||||| | ||||||||||||| |||| |  || ||||||||| |    
T  45454339 agagaattgttgttcccacatttgataagactgtggcacactagtaaaatacgattttgcctcctcggcagttaactgccgaggaatttgaaatccggat 45454438  T
Q  368 gcagttaactgccgaggaa 386  Q
    |||||||||||||||||||    
T  45454439 gcagttaactgccgaggaa 45454457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 20549368 - 20549251
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| ||||||||| ||  ||||||||||||||||||||||  | ||  ||||||||  ||||||||||||| |||| |  || ||||| |||||||||    
T  20549368 aattgttgtttacactttacataaggttgtgccacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcag 20549269  T
Q  372 ttaactgccgaggaaaac 389  Q
    |||||| |||||||||||    
T  20549268 ttaactaccgaggaaaac 20549251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 28694075 - 28694132
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  28694075 tcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgccgaggaaaac 28694132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 38604320 - 38604267
Alignment:
Q  336 cagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  38604320 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 38604267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 35962241 - 35962361
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||| ||  ||| ||| |||||| |||||||||  ||||||  ||| ||||||||| |||||||||||||  ||| |  || |||||||||||     
T  35962241 gagaattgcttttcccacgtttaataaggctgtgccacattagtaaaatacgattttgccctctcggcagttaactgtcgaggaatttgaaatccggcta 35962340  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  35962341 cagttaactgccgaggaaaac 35962361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 39751008 - 39751127
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||| |||||||  |||| |||| | ||||||||||||  ||||||||||||  | |||| |||||| |||| |  || |||| |||||||    
T  39751008 gagaattgctgttgacacattgcataatgttgaggcacacgagtaaaatacgtttttgcccccttggcaattaactgccgatgaatttgaaa-ccggctg 39751106  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  39751107 cagttaactgccgaggaaaac 39751127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 41743824 - 41743958
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||||||| ||  |||||||||| |||||||||||  | ||  ||||||||  |||  |||||||| |||| |  || ||||||||||||    
T  41743824 gagaattgttgtttacactttacataaggttgtaccacacgagtattttactcttttgccccctcgatagttaactgccgaggaatttgaaatccggctg 41743923  T
Q  369 cagttaactgccgaggaaaacaatattatgcagaca 404  Q
    |||||||||||||| |||||| | ||||||||||||    
T  41743924 cagttaactgccgaagaaaacta-attatgcagaca 41743958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 184691 - 184571
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggct 367  Q
    |||||||||||||  ||||| || || || |||||||||||||||| | |||    |||||||||| ||| |||| ||||||||||  ||||| |||||     
T  184691 gagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggcg 184593  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  184592 gcagttaactgccgaggaaaac 184571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 36678068 - 36677948
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggct 367  Q
    |||||||||||||  ||||| || || || |||||||||||||||| | |||    |||||||||| ||| |||| ||||||||||  ||||| |||||     
T  36678068 gagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggcg 36677970  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  36677969 gcagttaactgccgaggaaaac 36677948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 39408 - 39537
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagtt---------ttggaa 359  Q
    |||||||||||||||||| ||  |||||| |||||||||||||||  | ||  ||||||||  ||||||||||||| ||||| ||         || |||    
T  39408 gagaattgctgtttacactttacataaggctgtgccacacgagtattttactcttttgccccctcggcagttaactgccgaaattgtcgaggaatttgaa 39507  T
Q  360 atccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||||||||||    
T  39508 atccggctgcagttaactgccgaggaaaac 39537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 31957769 - 31957886
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacg-tttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||| ||||  ||||| ||||||||||||||||||| ||||||  ||| ||||  ||| ||| ||| |||||||||| |  || ||| |||||||||    
T  31957769 agaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcgacagctaactaccgaggaatttgaattccggctgc 31957868  T
Q  370 agttaactgccgaggaaa 387  Q
    |||||||| |||||||||    
T  31957869 agttaactaccgaggaaa 31957886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 32584049 - 32584106
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| ||||||||  ||||||||| ||||| |||||||||||||||||||||||||||    
T  32584049 tcggtagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaac 32584106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 386
Target Start/End: Complemental strand, 41858260 - 41858143
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||| ||| || || |  |||||||||||  ||||||||||||  |||||||||||||  |||||  ||  ||| |||||||    
T  41858260 gagaattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccggctg 41858161  T
Q  369 cagttaactgccgaggaa 386  Q
    ||||||||||||||||||    
T  41858160 cagttaactgccgaggaa 41858143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 43363336 - 43363279
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| |||||| |||||||||| ||||| ||||||||||||||| |||||||||||    
T  43363336 tcggcacttaactgccgaagttttagaaatacggctgcagttaactaccgaggaaaac 43363279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 3641580 - 3641700
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  |||||||||||||| | || ||||||||||| | ||||||||| ||| ||| ||||||| ||| || |  || ||| | ||||||    
T  3641580 gagaattgatgttcccacatttgataaggctatggcacacgagtaatttacgtttttgccccctcgacagttaattactgatgaattagaacttcggctg 3641679  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||||| |||||||||    
T  3641680 cagttaactgctgaggaaaac 3641700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 15030816 - 15030938
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccgg 365  Q
    |||||||||| ||||  |||||||| |  || |||||||||||||||||| ||     |||||||||| ||| |||| ||||||||||  ||||| ||||    
T  15030816 tagagaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccgg 15030914  T
Q  366 ctgcagttaactgccgaggaaaac 389  Q
    | ||||||||||||||||||||||    
T  15030915 cggcagttaactgccgaggaaaac 15030938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 22014210 - 22014300
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  22014210 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 22014300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 22014544 - 22014454
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||| |||    |||||||||| ||| |||| ||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  22014544 tgtgccacacgagtaaattacggaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 22014454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 45066501 - 45066380
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggc 366  Q
    ||||||||| ||||  |||||||| |  || |||||||||||||||||| ||     |||||||||| ||| |||| ||||||||||  ||||| |||||    
T  45066501 agagaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggc 45066403  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
     ||||||||||||||||||||||    
T  45066402 ggcagttaactgccgaggaaaac 45066380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 5300679 - 5300757
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaacta 345  Q
    |||||||||| |||| |||||||||||||||||| |  |||||||||||  ||||||||| ||| ||| ||||||||||    
T  5300679 tagagaattgttgttgacacatttgataaggttgagaaacacgagtaaaatacgtttttgtcccctcgacagttaacta 5300757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 44841947 - 44841893
Alignment:
Q  335 gcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||| |||||||||| ||||| ||| ||||||||||||||||| |||||    
T  44841947 gcagttaactgccgaagttttagaaatacggttgcagttaactgccgagaaaaac 44841893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 28694558 - 28694513
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagta 314  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||    
T  28694558 agagaattgctgttaacacattacataaggttgtgccacacgagta 28694513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 41274559 - 41274632
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaa 342  Q
    |||||||||| ||  |||||||||||||| |||| ||||||||||| | || |||||| |||||||||||||||    
T  41274559 gagaattgctattctcacatttgataaggctgtggcacacgagtaatttacttttttgccccttcggcagttaa 41274632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 20546787 - 20546867
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacg-tttttgcccttcggcagttaactaccga 349  Q
    |||||||| ||||  ||||| ||||||||||||||||||| ||||||  ||| ||||  ||| ||||||||||||||||||    
T  20546787 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactaccga 20546867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 377
Target Start/End: Original strand, 20854551 - 20854659
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| |||| ||||||||||||||| || |  |||||||||| | |  |   || || ||||||||||||| |||||||||| |||| ||||| |    
T  20854551 agagaattgttgttcacacatttgataaggctgagaaacacgagtaatttatctacatgtccctcggcagttaactgccgaagttttagaaaaccggcgg 20854650  T
Q  369 cagttaact 377  Q
    |||||||||    
T  20854651 cagttaact 20854659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 36127369 - 36127425
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    |||||||||||||  ||||||||| |||| ||||||| |||||||||| ||||||||    
T  36127369 tcggcagttaactgacgaagttttagaaaaccggctgaagttaactgctgaggaaaa 36127425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 40740900 - 40740960
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| ||||||||| ||||| ||||  | | ||||||||||||||||||||||||||||    
T  40740900 ccttcgacagttaactgccgaaattttaaagaaccggctgcagttaactgccgaggaaaac 40740960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 486129 - 486074
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgagg 384  Q
    ||||||||||||||||||||| ||||   |||||||||||||||||||| ||||||    
T  486129 cttcggcagttaactaccgaaattttctcaaatccggctgcagttaactaccgagg 486074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 35966889 - 35966782
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  || |||||||||||||||| ||||| ||||||  ||  ||||| ||| ||||||||||||| |||| |  || |||||||| ||    
T  35966889 agagaattgttgttcccatatttgataaggttgtgtcacactagtaaaatacaattttgccccctcggcagttaactgccgaggaatttgaaatccgact 35966790  T
Q  368 gcagttaa 375  Q
    ||||||||    
T  35966789 gcagttaa 35966782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 3085538 - 3085592
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaa 386  Q
    |||| |||||||||||||| ||||  | | |||||||||||||||||||||||||    
T  3085538 tcggtagttaactaccgaaattttaaagaaccggctgcagttaactgccgaggaa 3085592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 7168020 - 7168142
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||| ||||| |||| |||||||| |||||| || | ||||| ||||||  ||| ||||||||  ||| | |||| || ||||||  ||  ||| |||||    
T  7168020 tagaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccctcgactgttagctgccgaagaattcaaaaaccggc 7168119  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||    
T  7168120 tgcagttaactgccgaggaaaac 7168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 13783185 - 13783127
Alignment:
Q  331 ttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||  |||| ||||  | | ||||||||||||||||||||||||||||    
T  13783185 ttcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaac 13783127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 39604435 - 39604397
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgccct 331  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  39604435 ataaggctgtgccacacgagtaattgacgtttttgccct 39604397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 40077391 - 40077329
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    |||||||||| |||| ||||||||||||||| || |  |||||||||||  ||||||||||||    
T  40077391 tagagaattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttgccc 40077329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 1116264 - 1116207
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||| |  || ||||||||||||||||||||||||||| |||||    
T  1116264 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgagaaaaac 1116207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 18441581 - 18441500
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccga 349  Q
    ||||||||| |||| |||||||| |||||| || | ||||| ||||||  ||||||||| ||| ||||||||||||| ||||    
T  18441581 agagaattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccga 18441500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 31745175 - 31745236
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||| |||||||| |||||||||| ||||  | ||||||||||||| | |||||||||    
T  31745175 cccttcggtagttaactgccgaagttttagaaaaacagctgcagttaactactgaggaaaac 31745236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 38873002 - 38872949
Alignment:
Q  336 cagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||| |  ||  ||| ||||||||||||||||||||||||||||    
T  38873002 cagttaactaccgaggaatttaaaaaccggctgcagttaactgccgaggaaaac 38872949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 39252042 - 39252103
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||||||||||| |||| | ||||| || | || ||||| ||||||||||||||||||||    
T  39252042 tgcccttcggcagtcaactgctgaagtattagtaaaccggcggcagttaactgccgaggaaa 39252103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 42602457 - 42602514
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||||  ||  ||| |||| |||||||||||||||||||||||    
T  42602457 tcggcagttaactgccgaagaattcaaaaaccggatgcagttaactgccgaggaaaac 42602514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 3695361 - 3695421
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||| ||||| || |||||  |||||||||||||||| |||||||||||    
T  3695361 tgcccctcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactaccgaggaaaac 3695421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 7344638 - 7344576
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  7344638 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 7344576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 18205756 - 18205840
Alignment:
Q  306 acacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||  |||||||| || | ||||| ||||||| ||||||  ||  ||| ||||||||||||||||||| ||||||||    
T  18205756 acacgagtaaaatacgtttttaccacctcggcggttaactgccgaagaattcaaaaaccggctgcagttaactgccaaggaaaac 18205840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 30026313 - 30026253
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||| ||||| || |||||  |||||||||||||||| |||||||||||    
T  30026313 tgcccctcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactaccgaggaaaac 30026253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 377
Target Start/End: Original strand, 39831090 - 39831198
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| |||| ||||||||| |  || || | ||||||||||| | || |   ||||| |||| |||||||| ||||| |||| |||| |||||||    
T  39831090 agagaattgttgttgacacatttggtttggctgagacacacgagtaatttacctaaatgcccctcggtagttaactgccgaaattttagaaaaccggctg 39831189  T
Q  369 cagttaact 377  Q
    |||||||||    
T  39831190 cagttaact 39831198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 41855342 - 41855422
Alignment:
Q  310 gagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||  ||||||||||| | |||||||||||||  |||||  ||  |||  |||||||||||||||||||||||||||    
T  41855342 gagtaaaatacgtttttgcctcctcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgaggaaaac 41855422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 44727583 - 44727524
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| |||||| ||||||||| | |||  ||||||||||||||| |||||||||||    
T  44727583 ccttcggcaattaactgccgaagttt-gaaaaaacggctgcagttaactaccgaggaaaac 44727524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 46738736 - 46738856
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  46738736 gagaattgttgttcccacattacataaggttgtgccacacgagcaaatgacgtttttgccctctcggcagttaactgccgaagttttagaaatccggctg 46738835  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||||||||| |||||    
T  46738836 cagttaactgccgagaaaaac 46738856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 34139846 - 34139947
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    ||||||||||||||||||| ||||||||||| | ||||||||| |||||||| | |||||| ||||||  || |||||||||||||||||||||||||||    
T  34139846 cacatttgataaggttgtggcacacgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgag 34139945  T
Q  384 ga 385  Q
    ||    
T  34139946 ga 34139947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 40323770 - 40323654
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||||  |||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||||||  |||||||    
T  40323770 gagaattgctgttcccacattacataaggctgtgccacacaagtaaatgacgtttttgcccctgcggcagttaactaccgaag-tttggaa--ccggctg 40323674  T
Q  369 cagttaactgccgaggaaaa 388  Q
    |||||||||| ||| |||||    
T  40323673 cagttaactgtcgacgaaaa 40323654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 17834422 - 17834541
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||||||||||  |||||| |||||||||||||||| | | |    ||||||||||||||||||| |||||||||| | || ||||| ||    
T  17834422 gagaattgatgtttacacattacataaggctgtgccacacgagtaatttatgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcggc 17834521  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  17834522 agttaactgccgaggaaaac 17834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 382
Target Start/End: Complemental strand, 36185696 - 36185585
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||  |||||||  ||||||    
T  36185696 agagaattgctgtttccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggcagttcactaccgaa-atttggaa--ccggct 36185600  T
Q  368 gcagttaactgccga 382  Q
    |||||||||| ||||    
T  36185599 gcagttaactaccga 36185585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 7034 - 7123
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||| ||     ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  7034 tgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaac 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 27656973 - 27657090
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||  |||||||| |  ||||||||||||||||||||| |      ||||| ||||||||||||| || ||||||| ||||| |||||||    
T  27656973 gagaattgctgttcccacatttggtttggttgtgccacacgagtaaattattcaaatgcccctcggcagttaactgccaaagttttagaaatacggctgc 27657072  T
Q  370 agttaactgccgaggaaa 387  Q
    ||||||||||||||||||    
T  27657073 agttaactgccgaggaaa 27657090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 12210729 - 12210609
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||||  |||||||| |  || ||||||| |||||||||| ||     ||||| ||||||||||||| |||||||||| ||||| |||| |    
T  12210729 agagaattgctgttcccacatttggtttggctgtgccatacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggccg 12210630  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  12210629 cagttaactgccgaggaaaac 12210609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 36185124 - 36185208
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttt 354  Q
    |||||||||| ||  ||||||  |||||||||||||||||||||||||||  ||||| |||| ||||||||||||||||||||||    
T  36185124 gagaattgcttttcccacattccataaggttgtgccacacgagtaaatgatatttttaccctgcggcagttaactaccgaagttt 36185208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 46740632 - 46740520
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  |||||||||||||| |||| |||| |||||||||||||||||| |||||| |||||||||||| || |||| | || ||||| ||    
T  46740632 gagaattgttgttcccacatttgataaggctgtgacacaagagtaaatgacgtttttgtccttcgacagttaactaccaaaattttagtaaaccggcggc 46740533  T
Q  370 agttaactgccga 382  Q
    | |||| ||||||    
T  46740532 aattaagtgccga 46740520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 8129 - 8066
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  8129 tgcccctcggcagttaactacagaagttttagaaatacggctgcagttaactgccgaggaaaac 8066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 17840966 - 17840909
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  17840966 tcggcagttaactgccgaagttttagaaatccgactgcagttaactgccgaggaaaac 17840909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 17838645 - 17838704
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||    
T  17838645 cttcggcagttaactgccgaagttttagaaatccggctgcagtaaactaccgaggaaaac 17838704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 10098256 - 10098136
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggct 367  Q
    |||||||||||||  ||||| || || || |||||||||||||||| | |||    |||||||||| ||| |||| ||||||||||  ||||| ||||||    
T  10098256 gagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggct 10098158  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  10098157 gcagttaactgccgaggaaaac 10098136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 29593467 - 29593349
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgac-gtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||||||||||||||||||||| ||||||  ||  ||||  ||| ||| ||||||||| |||| |  || ||| ||||||||    
T  29593467 gagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacaattttaccccctcgacagttaactgccgaggaatttgaattccggctg 29593368  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  29593367 cagttaactgccgaggaaa 29593349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 42499341 - 42499463
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  ||||| ||||||||||||| ||||| ||||||  ||| |||| ||| |||| ||||||| | |||| |  || |||||||| |    
T  42499341 tagagaattgttgttcccacatgtgataaggttgtgtcacaccagtaaaatacgattttaccccttcgacagttaattgccgaggaatttgaaatccgac 42499440  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||    
T  42499441 tgcagttaactgccgaggaaaac 42499463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 45258142 - 45258024
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  ||||||||||  || |||||||||||||||||| ||     ||||| ||||||||||||| |  || |||| ||||| |||||||    
T  45258142 gagaattgttgttctcacatttgatttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgcataaattttagaaatacggctgc 45258043  T
Q  370 agttaactgccgaggaaaa 388  Q
    |||||||||||||||||||    
T  45258042 agttaactgccgaggaaaa 45258024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 46908549 - 46908492
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||    
T  46908549 tcggcagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaac 46908492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 380
Target Start/End: Complemental strand, 13921404 - 13921292
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| ||||  |||||||| |  ||||||||||||||||||||| ||     ||| | ||||||||||||| |||||||||| ||||||| ||     
T  13921404 tagagaattgttgttcccacatttggtttggttgtgccacacgagtaaattactcaaatgctcctcggcagttaactgccgaagttttagaaatccagcg 13921305  T
Q  368 gcagttaactgcc 380  Q
    |||||||||||||    
T  13921304 gcagttaactgcc 13921292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 389
Target Start/End: Complemental strand, 34742519 - 34742414
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    |||||||||||||| |||| ||||||||||| | |||||||| | || ||||||||||| |  ||| |  || |||||| | ||||||||||||||||||    
T  34742519 cacatttgataaggctgtggcacacgagtaatttacgttttttctccctcggcagttaattgtcgaggaattagaaatctgactgcagttaactgccgag 34742420  T
Q  384 gaaaac 389  Q
    ||||||    
T  34742419 gaaaac 34742414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 42583136 - 42583079
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||   |||||||| ||||| |||||||||||||||||||||||||||    
T  42583136 tcggcagttaactgtagaagttttagaaatacggctgcagttaactgccgaggaaaac 42583079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 43686987 - 43686926
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct 331  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||  ||| |||||||||    
T  43686987 gagaattgctgttcccacatttgataaggttgtgccacactagtaaaatacgattttgccct 43686926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 48829896 - 48829957
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    ||||||||| ||||  ||||||||||||||||||| ||||||||||| | ||||||||||||    
T  48829896 agagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgccc 48829957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 618801 - 618745
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||||||||||| |||| |  || ||||||||||||||||||||||||||||||||    
T  618801 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 392
Target Start/End: Complemental strand, 36186608 - 36186489
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||| |||| |||||||  |||||| |||| ||||||||||||  ||| ||||||||  ||||||||||| | |||| |  || |||| |||| |||||    
T  36186608 aattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaattcgaaa-ccggttgcag 36186510  T
Q  372 ttaactgccgaggaaaacaat 392  Q
    |||||||||||||||||||||    
T  36186509 ttaactgccgaggaaaacaat 36186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 34623519 - 34623401
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaag-ttttggaaatccggct 367  Q
    ||||||||||||| ||| |||  ||||||||| | ||||||||||| | ||||||||||| | ||||||||||||| |||| |  ||  || || |||||    
T  34623519 gagaattgctgttgacatattgcataaggttgagacacacgagtaatttacgtttttgcctcatcggcagttaactgccgaggaattaagagat-cggct 34623421  T
Q  368 gcagttaactgccgaggaaa 387  Q
    ||||||||||||||||||||    
T  34623420 gcagttaactgccgaggaaa 34623401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 603769 - 603833
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  603769 tgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 603833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 5537800 - 5537940
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc------ct-tcggcagttaactaccgaagttttggaaatc 362  Q
    |||||||| ||||  |||||||||||||| |||| ||||||| ||| | ||||||||| |      || |||||||||| || |||| |  || |||||     
T  5537800 gagaattgttgttcccacatttgataaggctgtggcacacgaataatttacgtttttgtctctcggctctcggcagttagctgccgaggaattagaaatt 5537899  T
Q  363 cggctgcagttaactgccgaggaaaacaatattatgcagaca 404  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  5537900 cggctgcagttaactgccgaggaaaacaa-attatgtagaca 5537940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 7975750 - 7975628
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttg-gaaatccggc 366  Q
    |||||||||| ||||  |||||||| |  ||||||||||||||||||  | |||    || ||||||||||| |||| ||||||||||  | || |||||    
T  7975750 tagagaattgttgttcccacatttggtttggttgtgccacacgagtactttacgaaaatgtccttcggcagtaaactgccgaagtttttagtaaaccggc 7975651  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
     ||||||||||||||||||||||    
T  7975650 ggcagttaactgccgaggaaaac 7975628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 40323202 - 40323284
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaag 351  Q
    |||||||| ||||  ||||||  |||||| ||||||||| ||||||||||| |||||| |||| ||||| |||||||||||||    
T  40323202 gagaattgttgttcccacattacataaggctgtgccacatgagtaaatgacatttttgcccctgcggcaattaactaccgaag 40323284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 377
Target Start/End: Original strand, 45256923 - 45257029
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgca 370  Q
    |||||||||||||||||||||||||||  ||||||||| |||||| | || |   || |||||||||||||| |  ||||||||| | || ||||| |||    
T  45256923 agaattgctgtttacacatttgataagactgtgccacatgagtaatttacctaaatgtccttcggcagttaattgtcgaagttttagtaaaccggcggca 45257022  T
Q  371 gttaact 377  Q
    | |||||    
T  45257023 gctaact 45257029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 31513118 - 31513077
Alignment:
Q  273 aattgctgtttacacatttgataaggttgtgccacacgagta 314  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  31513118 aattgttgtttacacatttgataaggttgtgccatacgagta 31513077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 41880475 - 41880532
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttt 354  Q
    ||||||||||||||||||||  |||    |||||||||||||||||||||||||||||    
T  41880475 ggttgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagttt 41880532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 9367803 - 9367743
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| |||    ||||||||||||||||||||||||||||||||    
T  9367803 cttcggcagttaactgccgaaatttgctcaaatccggctgcagttaactgccgaggaaaac 9367743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 10097880 - 10097970
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    || ||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  10097880 tgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 10097970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 10524496 - 10524376
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| ||||  |||||||| |  || |||| ||||||||||||| ||     ||||| |||||||||||||  ||||||||| |||| |||   |    
T  10524496 agagaattgttgttcccacatttggtttggctgtgtcacacgagtaaattactcaaatgcccctcggcagttaactgtcgaagttttagaaaaccgatgg 10524397  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  10524396 cagttaactgccgaggaaaac 10524376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 19804571 - 19804512
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttt-tggaaatccggctgcagttaactgccgagga 385  Q
    ||||| |||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  19804571 tgcccctcggtagttaactgccgaagtttgtggaaa-ccggctgcagttaactgccgagga 19804512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 38555492 - 38555432
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||| ||||| ||||  | | || |||||||||||||||||||||||||    
T  38555492 ccttcggcagttaactgccgaaattttaaagaaccagctgcagttaactgccgaggaaaac 38555432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 41884235 - 41884145
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    || ||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  41884235 tgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 41884145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 48194712 - 48194652
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    |||||||||||||  ||||||  |||||| ||||  |||||||||||||||||||||||||    
T  48194712 gagaattgctgttcccacattacataaggctgtgatacacgagtaaatgacgtttttgccc 48194652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 48314607 - 48314727
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||| |||| |||||||  ||||||||| |  |||| ||||||  || ||||||||| ||||||||||||| |||| |  ||  | | |||||||    
T  48314607 agagaattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttgcccctcggcagttaactgccgaggaattcaataaccggctg 48314706  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||||||| |||| ||||||    
T  48314707 cagttaactaccgacgaaaac 48314727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 387
Target Start/End: Complemental strand, 27453670 - 27453615
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    ||||||||||||| |||| |  ||  ||||||||||||||||||||||||||||||    
T  27453670 tcggcagttaactgccgaggaattaaaaatccggctgcagttaactgccgaggaaa 27453615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 15074337 - 15074247
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtt-ttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||| ||| |||| |||||||| || | || ||||| ||||||||||||||||||||||    
T  15074337 tgtgccacacgagtaaaatacgaaaatgcccttcggtagtaaactgccgaagttcttaggaaaccggcggcagttaactgccgaggaaaac 15074247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 20564193 - 20564251
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaa 387  Q
    ||||||||||||||| ||||| ||||   ||||||||| ||||||||||||||||||||    
T  20564193 cttcggcagttaactgccgaaattttctcaaatccggcagcagttaactgccgaggaaa 20564251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 9494882 - 9494825
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||| |  ||  ||| ||||||||||||||||||||||||||||    
T  9494882 tcggcagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaac 9494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 28980312 - 28980199
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||| |||||||  |||||| || | ||||||||||||  ||||||||| ||| || ||||||| || ||||||  ||  | |||||| ||    
T  28980312 gagaattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgccccctcagcagttagctgccgaagaattcaatatccggatg 28980213  T
Q  369 cagttaactgccga 382  Q
    ||||||||||||||    
T  28980212 cagttaactgccga 28980199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 30846867 - 30846814
Alignment:
Q  336 cagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||| ||||| ||||  | | ||||||||||||||||||||||||||||    
T  30846867 cagttaactgccgaaattttaaagaaccggctgcagttaactgccgaggaaaac 30846814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 40587623 - 40587668
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    |||||||||||||| |||| ||||||||||| | ||||||||||||    
T  40587623 cacatttgataaggatgtgacacacgagtaatttacgtttttgccc 40587668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 47741713 - 47741774
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    ||||||||| ||||  ||||||  ||||||||||||||||| ||||||  ||||||||||||    
T  47741713 agagaattgttgttctcacattacataaggttgtgccacactagtaaaatacgtttttgccc 47741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 13644419 - 13644475
Alignment:
Q  333 cggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||| ||||| ||||  | | |||||||||||||| |||||||||||||    
T  13644419 cggcagttaactgccgaaattttaaagaaccggctgcagttaaatgccgaggaaaac 13644475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 41623954 - 41623894
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    ||||||||||||| |||||||  ||||||||| | ||||| ||||||  ||||||||||||    
T  41623954 gagaattgctgttgacacattacataaggttgaggcacacaagtaaaatacgtttttgccc 41623894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 45767942 - 45767880
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  45767942 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 45767880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 379
Target Start/End: Complemental strand, 46863485 - 46863373
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| |||| || ||||  |||||| || | ||||| ||||||  ||||||||| ||| ||||||||||||| ||||    ||| ||| |||||    
T  46863485 tagagaattgttgttgacgcattgcataaggctgagacacacaagtaaaatacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggc 46863386  T
Q  367 tgcagttaactgc 379  Q
    |||||||||||||    
T  46863385 tgcagttaactgc 46863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 47750518 - 47750578
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||| ||||| || |||||  |||||||||||||||| |||||||||||    
T  47750518 tgcccctcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactcccgaggaaaac 47750578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 46989470 - 46989601
Alignment:
Q  259 taataaatctagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttgg 357  Q
    |||| ||| |||||||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||    || |    
T  46989470 taatgaatgtagagaattgttgtttacacatttaataaggttgtgtcatacgagtaaatgacgtttttgccctctcggcagttaactaccgagaaatttg 46989569  T
Q  358 aaatccggctgcagttaactgccgaggaaaac 389  Q
    || |||||||||||||||||||||||||||||    
T  46989570 aattccggctgcagttaactgccgaggaaaac 46989601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 43478970 - 43478849
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    ||||||||| ||||  ||||||  ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| | |||||||| |||||||||||    
T  43478970 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgatgtttttgtcccctcggcagttaactgctgaagttttagaaatccggct 43478871  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  43478870 gcagttaactgccgaggaaaac 43478849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 43476125 - 43476246
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagtttt-ggaaatccggct 367  Q
    |||||||| ||||  ||||||  ||||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||| | ||||||||||    
T  43476125 gagaattgttgttctcacattacataaggttgtgccacacgagtaaatgacgtttttgccccctcggaagttaactgccgaagttttagaaaatccggct 43476224  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  43476225 gcagttaactgccgaggaaaac 43476246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 55385094 - 55385191
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  55385094 ataaggttgtggcacacgagtaattgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaac 55385191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 41137650 - 41137774
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  ||||||||||||||||||||||||| ||||||  | |||||||| || || |||||||||| |||| |  || ||||||||||    
T  41137650 tagagaattgttgttcccacatttgataaggttgtgccacactagtaaaatatgtttttgctccatcagcagttaactgccgaggaatttgaaatccggc 41137749  T
Q  367 tgcagttaactgccgaggaaaacaa 391  Q
    |||||||||||||||||||||||||    
T  41137750 tgcagttaactgccgaggaaaacaa 41137774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 4002643 - 4002524
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||||||| ||  |||||| |||||||||||||||  | ||  |||||||| ||||||||||||||| || |  || |||||||||||||    
T  4002643 gagaattgctgtttacactttacataaggctgtgccacacgagtattttactcttttgcccctcggcagttaactactgaggaatttgaaatccggctgc 4002544  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  4002543 agttaactgccgaggaaaac 4002524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 389
Target Start/End: Original strand, 48246355 - 48246466
Alignment:
Q  279 tgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaact 377  Q
    |||||||||||||||||||| || | || ||||||||||||  |||||||||  ||||||||||||| | |||||||| |||||||||||||||||||||    
T  48246355 tgtttacacatttgataaggctgagtcatacgagtaaatgatatttttgccccctcggcagttaactgctgaagttttagaaatccggctgcagttaact 48246454  T
Q  378 gccgaggaaaac 389  Q
    | ||||||||||    
T  48246455 gtcgaggaaaac 48246466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 16647286 - 16647168
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||||| || ||||||||||  ||||||||||||||  ||||||||||||| |||| ||||| ||||||||||||    
T  16647286 gagaattgttgttcccacattgcataaggttctggcacacgagtacttgacgtttttgccccctcggcagttaactgccgatgttttagaaatccggctg 16647187  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  16647186 cagttaactgccgaggaaa 16647168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 600648 - 600563
Alignment:
Q  305 cacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  600648 cacacgagtaaatgacgtttttgcgccctcgacagttaactgccgaagttttggaaatccggccgcagttaactgtcgaggaaaac 600563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 16484568 - 16484475
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||  |||| |||| | |||||||||||||||||||||||||||||||    
T  16484568 ggttgtgccacacgagtaaatgacatttttgccctctcggcagttacctgtcgaaattttagtaatccggctgcagttaactgccgaggaaaac 16484475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 8475761 - 8475880
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||  | |||    || |||||||||||||||| |||||||||| | || ||||| ||    
T  8475761 gagaattgctgtttacatattacataaggttgtgccacacgagtactttacgaaaatgtccttcggcagttaactgccgaagttttagtaaaccggcggc 8475860  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  8475861 agttaactgccgaggaaaac 8475880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 389
Target Start/End: Original strand, 42165091 - 42165217
Alignment:
Q  263 aaatctagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatc 362  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||||||||  | |||    |||||||||||||||| || | |||||||| | || |    
T  42165091 aaatttagagaattgttgtttacacatttgataaggctgtgccacacgagtattttacgaaaatgcccttcggcagttagctgctgaagttttagtaaac 42165190  T
Q  363 cggctgcagttaactgccgaggaaaac 389  Q
    |||| |||||||| |||||||||||||    
T  42165191 cggcggcagttaattgccgaggaaaac 42165217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 50216993 - 50216879
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||||||||||||||| ||||||||||| ||||||||||| ||| | ||||||||||| |||| |  ||  |||||||||||    
T  50216993 gagaattgttgttcccacatttgataaggttgtggcacacgagtaattgacgtttttgccccattggcagttaactgccgaggaattaaaaatccggctg 50216894  T
Q  369 cagttaactgccgag 383  Q
    |||||||||||||||    
T  50216893 cagttaactgccgag 50216879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 4015267 - 4015148
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||||||||||  |||||| |||| ||||||||||  | |||    ||||||||||||||||||| |||||||||| | || ||||| |     
T  4015267 gagaattgctgtttacacattacataaggctgtgtcacacgagtactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcggg 4015168  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  4015167 agttaactgccgaggaaaac 4015148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 46993310 - 46993235
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaact 344  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||||||    
T  46993310 gagaattgctgttcacacatttgataaggctgtgccatacgagtaaatgacgtttttgccccctcggcagttaact 46993235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 27739647 - 27739586
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  27739647 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 27739586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 33305076 - 33304995
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaac 376  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||| |||||||  |||||||||||||||    
T  33305076 ataaggttgtgccatacgagtaaatgacgtttttgtccctgcggcagttaactaccgaag-tttggaa--ccggctgcagttaac 33304995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 5138406 - 5138290
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  |||||   |||||| |||||||||||||||||||||||||||| |||| || |||||||||||||||| |||||||  || |||     
T  5138406 gagaattgctgttcccacatgacataaggctgtgccacacgagtaaatgacgtttttgcccctacgacagttaactaccgaag-tttggaa--ccagcta 5138310  T
Q  369 cagttaactgccgaggaaaa 388  Q
    |||||||||||||| |||||    
T  5138309 cagttaactgccgacgaaaa 5138290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 19988393 - 19988513
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||||||  |||||||| |  || |||||||||||||||||| ||     ||||| ||||||||||||| |||||||||| ||||| ||||||    
T  19988393 agagaattgctgttctcacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctg 19988492  T
Q  369 cagttaactgccgaggaaaac 389  Q
    ||||| ||||||||| |||||    
T  19988493 cagttgactgccgagaaaaac 19988513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 48251008 - 48250888
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  ||||||||||||||||  | ||||||||||||||||||  ||||||||||||| | || |  || ||| ||||||||    
T  48251008 gagaattgttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaactgctgaggaatttgaattccggctg 48250909  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||    
T  48250908 cagttaactgccgaggaaaac 48250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 4331958 - 4331839
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||||||||||  |||||| |||||||||||||||  | |||    |  |||||||||||||||| |||||||||| | || ||||| ||    
T  4331958 gagaattgctgtttacacattacataaggctgtgccacacgagtactttacgaaaatatccttcggcagttaactgccgaagttttagtaaaccggcggc 4331859  T
Q  370 agttaactgccgaggaaaac 389  Q
    |||||||||| |||||||||    
T  4331858 agttaactgctgaggaaaac 4331839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 36134318 - 36134377
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  36134318 cttcggaagttaactaccgaagttttagaaatccgtctgcagttaactgccgaggaaaac 36134377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 24703497 - 24703436
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    ||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  24703497 tgcccctcggcagttaactaccgaagttttagaaattcggatgcagttaactgccgaggaaa 24703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 34543212 - 34543155
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  34543212 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 34543155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 36812770 - 36812891
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaag-ttttggaaatccggct 367  Q
    |||||||||||||||||| ||  |||||| |||||||||||||||  | ||  ||||| ||| |||||||||| ||||||| |  |||| ||||||||||    
T  36812770 gagaattgctgtttacactttacataaggatgtgccacacgagtattttactcttttgccccctcggcagttagctaccgaggaatttgaaaatccggct 36812869  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    |||||||||| |||||||||||    
T  36812870 gcagttaactaccgaggaaaac 36812891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 42166550 - 42166429
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||  | ||     || | |||||||||||||| |||||||||| | || |||||     
T  42166550 tagagaattgatgtttacacattacataaggttgtgccacacgagtactttacaaaaatgtcattcggcagttaactgccgaagttttagtaaaccggcg 42166451  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||| ||||||||||||||||    
T  42166450 gcagtaaactgccgaggaaaac 42166429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 270 - 390
Target Start/End: Original strand, 47070402 - 47070523
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||  |||| ||||||||||| ||||||||||||||| |||||| |||||| || || |||| ||||| ||||||    
T  47070402 gagaattgttgttcccacattgcataagactgtggcacacgagtaattgacgtttttgccctatcggcaattaactgccaaatttttagaaattcggctg 47070501  T
Q  369 cagttaactgccgaggaaaaca 390  Q
     |||||||| ||||||||||||    
T  47070502 tagttaacttccgaggaaaaca 47070523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 49219931 - 49219810
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||||||||||| |   ||||||||||||| |||||||||| ||||||  ||  ||||||| | |||| |||||||| |||| |  || |||||||||||    
T  49219931 agagaattgctgctcctacatttgataaggctgtgccacactagtaaaatacaattttgcctcctcggtagttaactgccgaggaattagaaatccggct 49219832  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  49219831 gcagttaactgccgaggaaaac 49219810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 50998788 - 50998699
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||| ||     ||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||    
T  50998788 tgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttataaatccggctgcagttaactgccgaagaaaac 50998699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 16611091 - 16611147
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  16611091 tgcccttcggcagttaactaccgaagttttagaaaaccggcggcagttaactgccga 16611147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 22048162 - 22048106
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccga 382  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  22048162 tgcccttcggcagttaactaccgaagttttagaaaaccggcggcagttaactgccga 22048106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 4004881 - 4004822
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  4004881 cttcggtagttaattgccgaagttttagaaatccggctgcagttaactgccgaggaaaac 4004822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 2271391 - 2271337
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagg 384  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  2271391 cttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgccgagg 2271337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 388
Target Start/End: Original strand, 4002731 - 4002793
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||| |||||| |||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  4002731 tgcccctcggcatttaattgccgaagttttagaaatccggctgcagttaactgccgaggaaaa 4002793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 12897824 - 12897878
Alignment:
Q  335 gcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  12897824 gcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 12897878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 2062379 - 2062440
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| |||||||||| |||| | ||||||||||||||| ||||||||||    
T  2062379 cccttcggcagttaactgccgaagttttagaaaactggctgcagttaactgtcgaggaaaac 2062440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 11249604 - 11249543
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| | |||||||| |||||  ||||||||||||||||||||||||||    
T  11249604 cccttcggcagttaactgctgaagttttagaaatatggctgcagttaactgccgaggaaaac 11249543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 14043978 - 14043917
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  ||||||||| ||||  |||||||||||||||||||||||||||    
T  14043978 cccttcggcagttaactgtcgaagttttagaaaatcggctgcagttaactgccgaggaaaac 14043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 19341698 - 19341613
Alignment:
Q  305 cacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||| | ||||||||| ||| ||||||||||||| |||| |  || ||||||||||||||||||||| |||||||||||    
T  19341698 cacacgagtaagttacgtttttgtcccctcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaac 19341613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 28817077 - 28817020
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| || ||||||| ||||| |||||||||||||||||||||||||||    
T  28817077 tcggcagttaactgccaaagttttagaaatacggctgcagttaactgccgaggaaaac 28817020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 32200330 - 32200245
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt 355  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| | | ||||   | ||||||||||||||||| ||| ||||||    
T  32200330 gagaattactgtttacacatttgataaggttgtaccacacgagtcatttacgtaaatacccttcggcagttaactgccggagtttt 32200245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 2647778 - 2647718
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||    
T  2647778 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaac 2647718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 388
Target Start/End: Original strand, 5136520 - 5136636
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||||  |||||  |||||||||| ||||||||||||||||| |||| || |||||||||||||||  |||||||  |||||||    
T  5136520 gagaattgttgttcccacattacataagactgtgccacacaagtaaatgacgtttttgcccctgcgacagttaactaccgaa-atttggaa--ccggctg 5136616  T
Q  369 cagttaactgccgaggaaaa 388  Q
    ||||||||| |||| |||||    
T  5136617 cagttaactaccgacgaaaa 5136636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 14403109 - 14402989
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||||||| ||  |||||| |||||||||||||||  | ||  ||||||||  ||||||||||||| |||| |  || |||||||||| |    
T  14403109 gagaattgttgtttacactttacataaggctgtgccacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaatccggcgg 14403010  T
Q  369 cagttaactgccgaggaaaac 389  Q
     ||||||||||||||||||||    
T  14403009 tagttaactgccgaggaaaac 14402989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 387
Target Start/End: Original strand, 596781 - 596836
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  596781 tcggcaattaactgccgaagttttgtaaattcggctgcagttaactgccgaggaaa 596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 3502007 - 3501914
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||  |||    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  3502007 ggttgtgccacacgagtaaaatacgaaactgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgaggaaaac 3501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 1835084 - 1835204
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggct 367  Q
    |||||||||||||  ||||| || || || |||||||||||||||| | |||    |||||||||| ||| |||| ||||||||||  ||||| |||||     
T  1835084 gagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaa-ccggcg 1835182  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  1835183 gcagttaactgccgaggaaaac 1835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 23443245 - 23443131
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  |||||||||||||| |||| ||||| ||||||  ||| |||| |||  ||||||||||||| |||| |  || ||| ||||||||    
T  23443245 gagaattgttgttcccacatttgataaggctgtgacacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattccggctg 23443146  T
Q  369 cagttaactgccgag 383  Q
    |||||||||||||||    
T  23443145 cagttaactgccgag 23443131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 389
Target Start/End: Original strand, 41802970 - 41803052
Alignment:
Q  308 acgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||  ||||||||||||  ||||||||||||| ||||||  ||  ||| ||||||||||||||||||||||||||||    
T  41802970 acgagtaaaatacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaac 41803052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 2743395 - 2743452
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||| |  || |||||||||||||||||||||||||||||||||    
T  2743395 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 2743452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 389
Target Start/End: Original strand, 7841070 - 7841175
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    |||||||||||||| |||| ||||| ||||||  ||  ||||||||  |||||| ||||||||||| |  || |||||| ||||||| ||||||||||||    
T  7841070 cacatttgataaggctgtgtcacactagtaaaatacaattttgccccctcggcaattaactaccgaggaatttgaaatctggctgcatttaactgccgag 7841169  T
Q  384 gaaaac 389  Q
    ||||||    
T  7841170 gaaaac 7841175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 13743290 - 13743347
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||| |  || |||||||||||||||||||||||||||||||||    
T  13743290 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 13743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 35743689 - 35743601
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||| ||||||||||  |||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  35743689 tgtgccacacgagtaaaatacgaaaatgccattcggcagtttgctaccgaagtttaggaaatc-ggcggcagttaactgccgaggaaaac 35743601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 19750039 - 19750091
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagg 384  Q
    ||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||    
T  19750039 tcggcagttaactgccgaaattttagaaatacggctgcagttaactgccgagg 19750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 52387719 - 52387831
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||||||||| ||||||  |||||||||||||||| |||||  | |||    |||||||||||||||||||  ||||||||| | || ||||  ||    
T  52387719 gagaattgctgtttgcacattacataaggttgtgccacatgagtattttacgaaaatgcccttcggcagttaactgtcgaagttttagtaaaccggtggc 52387818  T
Q  370 agttaactgccga 382  Q
    |||||||| ||||    
T  52387819 agttaactaccga 52387831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 54389789 - 54389849
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||    
T  54389789 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaac 54389849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 385
Target Start/End: Original strand, 11380373 - 11380491
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| |||| ||||||||| | ||| || |  |||||||||||  ||||||||| ||||||||||||||||| |||| |  ||  ||||  ||     
T  11380373 tagagaattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcagttaactgccgaggaattaaaaatatggt 11380472  T
Q  367 tgcagttaactgccgagga 385  Q
    |||||||||||||||||||    
T  11380473 tgcagttaactgccgagga 11380491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 44687588 - 44687505
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcc-cttcggcagttaactaccgaagttt 354  Q
    |||||||| ||||  ||||||  ||||| |||||||||  |||||||||||||||||||| || || |||||||||||||||||||    
T  44687588 gagaattgttgttcccacattacataagattgtgccac--gagtaaatgacgtttttgcctctgcgacagttaactaccgaagttt 44687505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 383
Target Start/End: Original strand, 66844 - 66948
Alignment:
Q  279 tgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaact 377  Q
    |||| ||||||||||||||| || | ||||||||||||  ||| ||||| ||| ||||||||||||| |||| || ||  ||| ||||||||||||||||    
T  66844 tgttgacacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcagttaactgccgaggtatt-caaaaccggctgcagttaact 66942  T
Q  378 gccgag 383  Q
     |||||    
T  66943 accgag 66948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 2275054 - 2275009
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaa 315  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||    
T  2275054 gagaattgctgtttacacatttgataaagctgtgtcacacgagtaa 2275009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 7941103 - 7941164
Alignment:
Q  328 cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||| ||||| ||||  | | |||||||||||||||||| |||||||||    
T  7941103 cccttcggcagttaactgccgaaattttaaagaaccggctgcagttaactgctgaggaaaac 7941164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 10492024 - 10492081
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| ||||||||  ||||||||| ||||| |||||||||||||||| ||||||||||    
T  10492024 tcggtagttaactgtcgaagttttagaaatacggctgcagttaactgacgaggaaaac 10492081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 13747794 - 13747737
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||| |  || ||||||||||||||||||||||| |||||||||    
T  13747794 tcggcagttaactgccgatgaatttgaaatccggctgcagttaactgctgaggaaaac 13747737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 36127336 - 36127381
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagta 314  Q
    |||||||| ||| | |||||||||||||||||||||||||||||||    
T  36127336 agagaattactgctaacacatttgataaggttgtgccacacgagta 36127381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 42756092 - 42756213
Alignment:
Q  269 agagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggct 367  Q
    |||| |||| |||| |||||||||||||||||  |  ||| |||||||  ||||||||||||  || ||||||||||  ||| |  ||  |||||||| |    
T  42756092 agaggattgttgttgacacatttgataaggttcagaaacatgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggtt 42756191  T
Q  368 gcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||    
T  42756192 gcagttaactgccgaggaaaac 42756213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 11094106 - 11094165
Alignment:
Q  329 ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||| ||||| || |||||||||| ||||| || ||||||||||||||||||||||||    
T  11094106 ccttcggtagttatctgccgaagttttagaaatacg-ctgcagttaactgccgaggaaaac 11094165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 13742715 - 13742799
Alignment:
Q  302 tgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    ||||| |||| |||||||||||||| | ||| || |||||||||||||||||||  |||| |||||||||||||||||| || |||||    
T  13742715 tgccatacgaataaatgacgtttttactcctgcgacagttaactaccgaagttt--gaaa-ccggctgcagttaactgctgacgaaaa 13742799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 353
Target Start/End: Complemental strand, 13743244 - 13743160
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagtt 353  Q
    |||||||||| ||  ||||||  ||||| ||||| | ||||||||||||||||||||| |||| || ||||||||| ||||||||    
T  13743244 gagaattgcttttcccacattacataagattgtgtctcacgagtaaatgacgtttttgcccctgcgacagttaactcccgaagtt 13743160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 34049074 - 34049134
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| |||    ||||||||||||||||||||||||||||||||    
T  34049074 cttcggcagttaactgccgaaatttgctcaaatccggctgcagttaactgccgaggaaaac 34049134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 46402376 - 46402432
Alignment:
Q  330 cttcggcagttaactaccgaagttttgg-aaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||    
T  46402376 cttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgagga 46402432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 46697675 - 46697765
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||  |||    |||||||||||||||  |||||||||||||  || || ||||| ||||||||||||||||||||||    
T  46697675 tgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaa-ccggcggcagttaactgccgaggaaaac 46697765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 389
Target Start/End: Complemental strand, 50957717 - 50957685
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||||||||||||    
T  50957717 gaaatccggctgcagttaactgccgaggaaaac 50957685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 1835439 - 1835346
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||  |||    |||| ||||||||||  |||||||||||||  ||||| ||||| |||||||||||||||| |||||    
T  1835439 ggttgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgccgagaaaaac 1835346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 2267021 - 2267084
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||| ||| ||||||| |  ||||||||| || |||||||||||||||||| |||||||||||    
T  2267021 tgcccctcgacagttaattgtcgaagttttagatatccggctgcagttaactaccgaggaaaac 2267084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 19842495 - 19842558
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||| ||||| ||||  | |  ||||||||||||||||| |||||||||    
T  19842495 tgcccttcggcagttaactgccgaaattttaaagaatcggctgcagttaactgctgaggaaaac 19842558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 29918427 - 29918360
Alignment:
Q  322 tttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| |||| |||||| |||||| |||||   || |||| ||||||||||||||||||||||||||||    
T  29918427 ttttggcccctcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaac 29918360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 29967580 - 29967513
Alignment:
Q  322 tttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||| |||| |||||| |||||| |||||   || |||| ||||||||||||||||||||||||||||    
T  29967580 ttttggcccctcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaac 29967513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 31951253 - 31951304
Alignment:
Q  334 ggcagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||||||||||| |||| |||| ||||| |||||||||| |||||||    
T  31951253 ggcagttaactaccgaaattttagaaaaccggcggcagttaactaccgagga 31951304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 389
Target Start/End: Complemental strand, 49140897 - 49140866
Alignment:
Q  358 aaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||||||||||||||    
T  49140897 aaatccggctgcagttaactgccgaggaaaac 49140866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 385
Target Start/End: Original strand, 16861065 - 16861179
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgca 370  Q
    |||||||||||| ||||||||| |  || || | ||||||||||| | || |   ||||| ||| |||||||||  ||||||||| |||| |||| ||||    
T  16861065 agaattgctgttgacacatttggtttggctgagacacacgagtaatttacctaaatgcccctcgacagttaactgtcgaagttttagaaaaccggatgca 16861164  T
Q  371 gttaactgccgagga 385  Q
    ||||||| |||||||    
T  16861165 gttaactaccgagga 16861179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 29008850 - 29008904
Alignment:
Q  300 tgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttt 354  Q
    |||||||||||||||||  |||    |||||||||||||||||||||||||||||    
T  29008850 tgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagttt 29008904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 41844139 - 41844203
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||  |||||||||||||  ||||| ||||| |||||||||||| |||||||||    
T  41844139 tgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaactgctgaggaaaac 41844203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 48888763 - 48888793
Alignment:
Q  358 aaatccggctgcagttaactgccgaggaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  48888763 aaatccggctgcagttaactgccgaggaaaa 48888793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 49144539 - 49144475
Alignment:
Q  326 tgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||  |||||||||||||  ||||| ||||| ||||||||||||||| ||||||    
T  49144539 tgcccttcggcagtttgctaccgaagttttaaggaaa-ccggcggcagttaactgccgaagaaaac 49144475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 387
Target Start/End: Original strand, 50953324 - 50953354
Alignment:
Q  357 gaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||||||||||||||||||||||||||||    
T  50953324 gaaatccggctgcagttaactgccgaggaaa 50953354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 9426592 - 9426683
Alignment:
Q  297 ggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaa 387  Q
    |||||| |||||||||||||  |||    |||||||||||||||  |||||||||||||  ||||| ||||| |||||||| |||||||||||    
T  9426592 ggttgtaccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaa-ccggcggcagttaaatgccgaggaaa 9426683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 17561760 - 17561809
Alignment:
Q  336 cagttaactaccgaagttttggaaatccggctgcagttaactgccgagga 385  Q
    ||||||||| ||||| |||| |||| |||||||||||||||| |||||||    
T  17561760 cagttaactgccgaaattttagaaaaccggctgcagttaactcccgagga 17561809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 19440253 - 19440310
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||||  ||   || ||||||||||||||||||||||||||||    
T  19440253 tcggcagttaactgccgaagaattcataaaccggctgcagttaactgccgaggaaaac 19440310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 21951823 - 21951893
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaacaatattatgcagaca 404  Q
    ||||||||||||| ||||  |||| |||| ||||| |||||  ||||||||||||||||  ||||||||||||    
T  21951823 tcggcagttaactgccgatttttttgaaaaccggcggcagtatactgccgaggaaaaca--attatgcagaca 21951893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 391
Target Start/End: Complemental strand, 28611146 - 28611117
Alignment:
Q  362 ccggctgcagttaactgccgaggaaaacaa 391  Q
    ||||||||||||||||||||||||||||||    
T  28611146 ccggctgcagttaactgccgaggaaaacaa 28611117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 42900167 - 42900224
Alignment:
Q  326 tgcccttcggcagttaactaccgaagttttg-gaaatccggctgcagttaactgccga 382  Q
    ||||||||||||||||||| | ||||||||| | || ||||| |||||||||||||||    
T  42900167 tgcccttcggcagttaactgctgaagttttgagtaaaccggcggcagttaactgccga 42900224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 52570690 - 52570585
Alignment:
Q  284 acacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    |||||||  |||||| || | ||||||| ||||  |||||||| ||| ||||||||||||| ||||||  ||  ||| ||| |||||||||||| |||||    
T  52570690 acacattgcataaggctgaggcacacgattaaaatacgttttttcccctcggcagttaactgccgaagaattcaaaaaccgactgcagttaactaccgag 52570591  T
Q  384 gaaaac 389  Q
     |||||    
T  52570590 aaaaac 52570585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 2645452 - 2645510
Alignment:
Q  332 tcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| ||||||||||  ||||| ||||| ||||||||| ||||||||||||    
T  2645452 tcggcagttaactgccgaagtttttaggaaa-ccggcggcagttaacagccgaggaaaac 2645510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 3953296 - 3953234
Alignment:
Q  328 cccttcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||||||||||  ||||||| |||||  ||||| ||||| ||||||||||||||||||||||    
T  3953296 cccttcggcagtttgctaccgaggtttttaggaaa-ccggcggcagttaactgccgaggaaaac 3953234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 6489267 - 6489327
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    ||||||||||||| |||||||  ||||||||| | ||||| ||||| | ||||||||||||    
T  6489267 gagaattgctgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccc 6489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 49268895 - 49268863
Alignment:
Q  358 aaatccggctgcagttaactgccgaggaaaaca 390  Q
    |||||||| ||||||||||||||||||||||||    
T  49268895 aaatccggttgcagttaactgccgaggaaaaca 49268863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 51696654 - 51696594
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc 330  Q
    |||||||| ||||  |||||||||||||| |||| ||||||||||| | || |||||||||    
T  51696654 gagaattgttgttgccacatttgataaggctgtggcacacgagtaatttacttttttgccc 51696594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 771 - 872
Alignment:
Q  285 cacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgag 383  Q
    ||||||||||||||||||| ||||||||||| | ||||||||| |||||||| | |||||| ||||||  || |||||||||||||||||||||||||||    
T  771 cacatttgataaggttgtggcacacgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgag 870  T
Q  384 ga 385  Q
    ||    
T  871 ga 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 17490 - 17372
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  ||||| ||||||||||||||||||| ||||||  ||| |||| |||  ||||||||||||| |||| |  || ||||||||||||    
T  17490 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 17391  T
Q  369 cagttaactgccgaggaaa 387  Q
    |||||||||||||||||||    
T  17390 cagttaactgccgaggaaa 17372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 16096 - 15974
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||  | ||   ||||| || ||||||||||||| |||| |  || ||||||| ||    
T  16096 tagagaattgctgtttacactttacataaggttgtgccacacgagtattttactcatttgctccctcggcagttaactgccgaggaatttgaaatccagc 15997  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
    |||||||||||||||||||||||    
T  15996 tgcagttaactgccgaggaaaac 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 11235 - 11353
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacg-tttttgcccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||||||||  |||||||||||||| |||||||||| ||||||  ||| ||||  ||| ||||||||||||| |||| |  || ||| ||||||||    
T  11235 gagaattgctgttcccacatttgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattccggctg 11334  T
Q  369 cagttaactgccgaggaaa 387  Q
    ||||||||| |||||||||    
T  11335 cagttaacttccgaggaaa 11353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 383
Target Start/End: Original strand, 17963 - 18079
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  |||||||||||| |||||| ||||||||||| | ||||||||| ||| ||| ||||||||| |||| |  || |||| |||||    
T  17963 tagagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgccccctcgacagttaactgccgaggaattagaaacccggc 18062  T
Q  367 tgcagttaactgccgag 383  Q
    |||||||||||||||||    
T  18063 tgcagttaactgccgag 18079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 18409 - 18312
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| |||| ||||| ||||| ||||||||||| ||||||||| ||||||| |||||||||| |||||||| |||||||| |||| ||| ||||||    
T  18409 ataaggatgtggcacacaagtaattgacgtttttgtcccttcggcggttaactgccgaagttttagaaatccgactgcagtttactgtcgaagaaaac 18312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 383
Target Start/End: Complemental strand, 54881 - 54765
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||| ||||  |||||||||||| |||||| ||||||||||| | ||||||||| ||| ||| ||||||||| |||| |  || |||| |||||    
T  54881 tagagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgccccctcgacagttaactgccgaggaattagaaacccggc 54782  T
Q  367 tgcagttaactgccgag 383  Q
    |||||||||||||||||    
T  54781 tgcagttaactgccgag 54765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 54435 - 54532
Alignment:
Q  293 ataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    |||||| |||| ||||| ||||| ||||||||||| ||||||||| ||||||| |||||||||| |||||||| |||||||| |||| ||| ||||||    
T  54435 ataaggatgtggcacacaagtaattgacgtttttgtcccttcggcggttaactgccgaagttttagaaatccgactgcagtttactgtcgaagaaaac 54532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 12466 - 12407
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  12466 cttcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgatgaaaac 12407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 10587 - 10706
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||  |||||||| |  ||||||| ||||||||||||| || |   |||||||||||| |||||| |||||||||| | || ||||| ||    
T  10587 gagaattgttgttcccacatttggtttggttgtgtcacacgagtaaattacttaaatgcccttcggcaattaactgccgaagttttagtaaaccggcggc 10686  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||    
T  10687 agttaactgccgagggaaac 10706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 573 - 453
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| |||||||||||||||||||  || |  |||||||||||  ||| |||||| || ||||||||||||| ||||||  ||   ||||||||||    
T  573 gagaattgatgtttacacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagttaactgccgaagaattaataatccggctg 474  T
Q  369 cagttaactgccgaggaaaac 389  Q
    |||||||||| ||||||||||    
T  473 cagttaactgtcgaggaaaac 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 15760 - 15641
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgc 369  Q
    |||||||| ||||| |||||||| |  ||||||||||||||||||  | |||    || ||||||||||||||||  ||||||||| | || ||||| ||    
T  15760 gagaattggtgtttccacatttggtttggttgtgccacacgagtactttacgaaaatgtccttcggcagttaactgtcgaagttttagtaaaccggcggc 15661  T
Q  370 agttaactgccgaggaaaac 389  Q
    ||||||||||||||||||||    
T  15660 agttaactgccgaggaaaac 15641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 763 - 885
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacg-tttttgcccttcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||||||||  ||||| |||||||| |||||||||| ||||||  ||| ||||  ||| ||||||||||||| || | |  || ||||| ||||    
T  763 tagagaattgctgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgcctaggaatttgaaattcggc 862  T
Q  367 tgcagttaactgccgaggaaaac 389  Q
    || ||||||||||||||||||||    
T  863 tgtagttaactgccgaggaaaac 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 11592 - 11507
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagtttt 355  Q
    |||||||| ||||  |||||||| |  || |||||||||||||||||| || |   ||||||||||||||||||| ||||||||||    
T  11592 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttt 11507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 5327 - 5385
Alignment:
Q  332 tcggcagttaactaccgaagtttt--ggaaatccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||| |||||||||   ||||| ||||| ||||||||||||||||||||||    
T  5327 tcggcagttaactgccgaagtttgaaggaaa-ccggcggcagttaactgccgaggaaaac 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 22335 - 22456
Alignment:
Q  268 tagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccct-tcggcagttaactaccgaagttttggaaatccggc 366  Q
    |||||||||||| ||||||| ||  ||||||||||| ||||||||||  | ||  ||||||||  ||||||||||||| |||| |  || ||||| ||||    
T  22335 tagagaattgctatttacactttacataaggttgtgtcacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaattcggc 22434  T
Q  367 tgcagttaactgccgaggaaaa 388  Q
    ||||||||||||| ||||||||    
T  22435 tgcagttaactgctgaggaaaa 22456  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 236396 - 236279
Alignment:
Q  272 gaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgcag 371  Q
    ||||||||| |||||||||  |||||| |||||||||||||||  | |||    ||||||||||| ||||||| |||||||||| | || | ||| ||||    
T  236396 gaattgctgattacacattatataaggctgtgccacacgagtactttacgaaaatgcccttcggcggttaactgccgaagttttagtaaactggcggcag 236297  T
Q  372 ttaactgccgaggaaaac 389  Q
    | ||||||||||||||||    
T  236296 taaactgccgaggaaaac 236279  T

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Target: scaffold0260 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 11777 - 11833
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgccgaggaaaa 388  Q
    |||||||||||||||||| |  || ||||||||||||||||||||||||||||||||    
T  11777 tcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 11833  T

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Target: scaffold0504 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 12318 - 12436
Alignment:
Q  271 agaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatccggctgca 370  Q
    ||||||||||||||||||||  | || |||||||||||||||||  | ||     |||||||||||||||||||  |||| |||| | || ||||| |||    
T  12318 agaattgctgtttacacattacacaaagttgtgccacacgagtactttacaaaaatgcccttcggcagttaactgtcgaaattttagtaaaccggcggca 12417  T
Q  371 gttaactgccgaggaaaac 389  Q
     ||||||||||||||||||    
T  12418 attaactgccgaggaaaac 12436  T

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Target: scaffold0361 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 4539 - 4421
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgc-ccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    |||||||| ||||  ||||| ||||||||||||||||||| ||||||  ||| |||| | || ||||||||||||| |||| |  || ||| ||||||||    
T  4539 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttactccctcggcagttaactgccgaggaatttgaactccggctg 4440  T
Q  369 cagttaactgccgaggaaa 387  Q
    ||||||| | |||||||||    
T  4439 cagttaaataccgaggaaa 4421  T

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Target: scaffold0340 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 1319 - 1200
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactaccgaagttttggaaatccggctg 368  Q
    ||||||||||| | |||||||  |||||| || | ||||||||||| | ||||||||| ||| ||||||||||||| |||| |  || |||| ||||| |    
T  1319 gagaattgctgctgacacattgcataaggctgaggcacacgagtaatttacgtttttgtcccctcggcagttaactgccgaggaatttgaaa-ccggcag 1221  T
Q  369 cagttaactgccgaggaaaac 389  Q
    || ||||||||||||||||||    
T  1220 caattaactgccgaggaaaac 1200  T

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Target: scaffold0101 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 36613 - 36553
Alignment:
Q  330 cttcggcagttaactaccgaagttttggaaa-tccggctgcagttaactgccgaggaaaac 389  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||||||||||    
T  36613 cttcggcagttaactgccgaaattttgaaaaatccggctgcaattaactgccgaggaaaac 36553  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 389
Target Start/End: Complemental strand, 69366 - 69240
Alignment:
Q  263 aaatctagagaattgctgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgcccttcggcagttaactaccgaagttttggaaatc 362  Q
    |||| |||||||||| ||||  ||| |||| |  || |||||||||||||||||| ||     | ||| ||||||||||||| |||||||||| |||||     
T  69366 aaatttagagaattgatgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaata 69267  T
Q  363 cggctgcagttaactgccgaggaaaac 389  Q
    ||| |||||||||||| ||| ||||||    
T  69266 cggatgcagttaactgtcgaagaaaac 69240  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 13346 - 13299
Alignment:
Q  270 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaat 317  Q
    |||||||||||||| ||||||  |||||| ||||||||||||||||||    
T  13346 gagaattgctgtttccacattacataaggctgtgccacacgagtaaat 13299  T

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Target: scaffold0268 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 15489 - 15441
Alignment:
Q  332 tcggcagttaactaccgaagttttggaaatccggctgcagttaactgcc 380  Q
    ||||||||||||| | ||||| || |||||||||| |||||||||||||    
T  15489 tcggcagttaactgctgaagtattagaaatccggcggcagttaactgcc 15441  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 390
Target Start/End: Original strand, 54592 - 54620
Alignment:
Q  362 ccggctgcagttaactgccgaggaaaaca 390  Q
    |||||||||||||||||||||||||||||    
T  54592 ccggctgcagttaactgccgaggaaaaca 54620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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