View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19621_low_8 (Length: 335)
Name: NF19621_low_8
Description: NF19621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19621_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 46814549 - 46814282
Alignment:
| Q |
8 |
cgaagaatatgaaaacgaagaagcgaactacgaagatgcaaacgaaggagaagattcagagaaacgagtgaaaactccgtcatcggtagatgaagttgaa |
107 |
Q |
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| T |
46814549 |
cgaagaaaatgaaaacgaagaagcgaactacgaagatgcaaacgaaggagaagattcagagaaacgagtgaaaactccgtcatcggtagatgaagttgaa |
46814450 |
T |
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| Q |
108 |
gccaaactcaaagctcttaagctcaaatacgctgttaaaaatcaaaaccctaacgccgttaagctatatcttcacatcggtggtaattcccccaacgcaa |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
46814449 |
gccaaactcaaagctcttaagctcaaatacgctgttaaaaatcaaaaccctaacgccgttaagctttatcttcacatcggtggtaattcccccaacgcaa |
46814350 |
T |
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| Q |
208 |
aatgggtaatttctgagaaatttactacttactcttttgttaaaactcgttgtgttggtggaaacagc |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46814349 |
aatgggtaatttctgagaaatttactacttactcttttgttaaaactcgttgtgttggtggaaacagc |
46814282 |
T |
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