View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19622_low_15 (Length: 288)
Name: NF19622_low_15
Description: NF19622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19622_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 22586616 - 22586355
Alignment:
| Q |
17 |
aattcaatgtttagatttcacttaacaaaattgtaagaataatataaaggccccatttcaaattatgaggccgtgaaagatgacacattttgacaatatt |
116 |
Q |
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|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22586616 |
aattcaatttttagatttcacttaacaaaattgtaagaataggtaaaaggccccatttcaaattatgaggccgtgaaagatgacacattttgacaatatt |
22586517 |
T |
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| Q |
117 |
acaacattattatttagaatagaaatttccttagaagtcaaaccataatacatacaaaaaaccacatagccacattgcttggctttcttttaaaagtcaa |
216 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22586516 |
acaacattatt---tagaatagaaatttccttagaagtcaaaccataatacatacaaaaaaccacatagccacattgcttggctttcttttaaaagtcaa |
22586420 |
T |
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| Q |
217 |
gatagaagaaac-aagtattgcataacaaccacctcttcatatatctactccactctttcatatc |
280 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22586419 |
gatagaagaaacaaagtattgcataacaaccacctcttcatatatctactccactctttcatatc |
22586355 |
T |
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