View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19625_high_6 (Length: 280)
Name: NF19625_high_6
Description: NF19625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19625_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 9 - 265
Target Start/End: Complemental strand, 29213051 - 29212800
Alignment:
| Q |
9 |
aaaataataattaaattatggaagtgaaatactcaaaatattgtgatgaagatgttatgagaaatagaaattggtatttataggccgttggagatagata |
108 |
Q |
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| T |
29213051 |
aaaataataattaaattatggaagtgaaatactcaaaatattgtgatgaagatgttatgagaaatagaaattggtatttataggccgttgga----gata |
29212956 |
T |
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| Q |
109 |
aactcaaggactttgactttaattatttaaataaaccaattgttggaggcnnnnnnnngtttattgaagaatgtttcaaatctatggaaacttaggaagt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
29212955 |
aactcaaggactttgactttaattatttaaataaaccaattgttggaggc-tttttttgtttattgaagaatgtttcaaatctatggaaacttaggaagt |
29212857 |
T |
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| Q |
209 |
aacggttatataagagtttataataatgaaatgaatgcatgcagaatttgcaaattg |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29212856 |
aacggttatataagagtttataataatgaaatgaatgcatgcagaatttgcaaattg |
29212800 |
T |
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