View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19625_low_1 (Length: 643)

Name: NF19625_low_1
Description: NF19625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19625_low_1
NF19625_low_1
[»] chr2 (85 HSPs)
chr2 (389-631)||(13136654-13136906)
chr2 (393-523)||(43722904-43723035)
chr2 (385-523)||(6825974-6826114)
chr2 (7-138)||(13137257-13137388)
chr2 (280-401)||(13136964-13137085)
chr2 (388-524)||(5104952-5105086)
chr2 (385-523)||(3874482-3874630)
chr2 (56-181)||(13137132-13137257)
chr2 (442-523)||(13972732-13972813)
chr2 (423-523)||(10599951-10600051)
chr2 (448-523)||(5665830-5665905)
chr2 (283-348)||(9185388-9185453)
chr2 (280-348)||(13971855-13971923)
chr2 (280-348)||(40781548-40781616)
chr2 (282-348)||(25959651-25959717)
chr2 (344-401)||(6826168-6826225)
chr2 (283-348)||(9188616-9188681)
chr2 (283-348)||(29440571-29440636)
chr2 (283-348)||(37279640-37279705)
chr2 (280-348)||(5666594-5666661)
chr2 (280-348)||(31585901-31585969)
chr2 (280-348)||(43207851-43207919)
chr2 (280-348)||(43723776-43723844)
chr2 (84-182)||(25820617-25820715)
chr2 (84-182)||(43723943-43724041)
chr2 (283-348)||(22021144-22021209)
chr2 (283-348)||(25874257-25874322)
chr2 (85-182)||(26366157-26366254)
chr2 (454-523)||(38014636-38014705)
chr2 (283-348)||(45493120-45493185)
chr2 (283-348)||(45500862-45500927)
chr2 (280-336)||(15470546-15470602)
chr2 (350-401)||(5666058-5666109)
chr2 (283-346)||(31427505-31427568)
chr2 (280-346)||(5105805-5105871)
chr2 (84-182)||(25138701-25138799)
chr2 (454-524)||(31430569-31430639)
chr2 (283-348)||(1386386-1386451)
chr2 (344-401)||(3874684-3874741)
chr2 (280-345)||(6826850-6826915)
chr2 (283-348)||(8888712-8888777)
chr2 (287-348)||(11347863-11347924)
chr2 (283-348)||(12219872-12219937)
chr2 (442-523)||(16788389-16788469)
chr2 (287-348)||(24235172-24235233)
chr2 (287-348)||(24238444-24238505)
chr2 (283-348)||(25138895-25138960)
chr2 (283-348)||(25870860-25870925)
chr2 (283-339)||(33310752-33310808)
chr2 (280-348)||(42368672-42368740)
chr2 (301-348)||(3875363-3875410)
chr2 (83-182)||(15470701-15470800)
chr2 (283-346)||(45457240-45457303)
chr2 (84-182)||(6827014-6827112)
chr2 (84-182)||(13971675-13971773)
chr2 (283-345)||(16790721-16790783)
chr2 (282-348)||(30274731-30274797)
chr2 (283-348)||(9966333-9966398)
chr2 (283-348)||(27266865-27266930)
chr2 (303-348)||(40259123-40259168)
chr2 (344-400)||(5105124-5105180)
chr2 (344-400)||(43723098-43723154)
chr2 (301-348)||(16179203-16179250)
chr2 (283-346)||(38015597-38015660)
chr2 (283-346)||(45453952-45454015)
chr2 (385-444)||(13972656-13972717)
chr2 (454-523)||(25873203-25873272)
chr2 (283-345)||(30926621-30926682)
chr2 (283-348)||(22630917-22630982)
chr2 (283-348)||(37937183-37937248)
chr2 (76-168)||(45457409-45457502)
chr2 (284-348)||(25820811-25820875)
chr2 (350-401)||(13972551-13972602)
chr2 (84-182)||(31427314-31427413)
chr2 (83-182)||(40781715-40781813)
chr2 (108-170)||(1503221-1503283)
chr2 (108-170)||(1506425-1506487)
chr2 (108-170)||(13518559-13518621)
chr2 (454-523)||(25869835-25869904)
chr2 (148-182)||(42368537-42368571)
chr2 (148-182)||(43207716-43207750)
chr2 (454-499)||(25139971-25140016)
chr2 (127-168)||(36808260-36808301)
chr2 (283-348)||(36808406-36808471)
chr2 (483-523)||(40780658-40780698)
[»] chr5 (76 HSPs)
chr5 (385-523)||(30065562-30065702)
chr5 (385-501)||(2836702-2836819)
chr5 (441-521)||(39191333-39191413)
chr5 (385-523)||(28788252-28788401)
chr5 (385-523)||(7270241-7270377)
chr5 (393-502)||(18031731-18031850)
chr5 (385-499)||(4100284-4100413)
chr5 (280-348)||(41876724-41876792)
chr5 (442-501)||(32837105-32837164)
chr5 (442-501)||(37214788-37214847)
chr5 (385-523)||(40916739-40916889)
chr5 (442-500)||(22937974-22938032)
chr5 (283-348)||(21332643-21332708)
chr5 (344-401)||(30065756-30065813)
chr5 (442-523)||(43490793-43490874)
chr5 (280-348)||(7271110-7271178)
chr5 (74-182)||(7271279-7271387)
chr5 (442-525)||(21827959-21828043)
chr5 (280-348)||(30066403-30066471)
chr5 (280-348)||(33552215-33552283)
chr5 (84-182)||(4099299-4099397)
chr5 (442-523)||(21336660-21336742)
chr5 (344-401)||(4100173-4100230)
chr5 (454-523)||(14016967-14017036)
chr5 (84-181)||(21332448-21332545)
chr5 (283-346)||(22131326-22131389)
chr5 (83-182)||(28787092-28787191)
chr5 (99-182)||(30066572-30066655)
chr5 (283-348)||(12058455-12058520)
chr5 (283-348)||(12088052-12088117)
chr5 (282-347)||(17664646-17664711)
chr5 (283-348)||(18952787-18952852)
chr5 (283-348)||(20055868-20055933)
chr5 (283-340)||(26752664-26752721)
chr5 (283-348)||(26895567-26895632)
chr5 (283-348)||(26907418-26907483)
chr5 (283-348)||(34132946-34133011)
chr5 (283-348)||(34143177-34143242)
chr5 (280-348)||(4099477-4099545)
chr5 (284-348)||(42063016-42063080)
chr5 (384-489)||(2837526-2837641)
chr5 (283-346)||(14016101-14016164)
chr5 (385-451)||(33551415-33551482)
chr5 (350-401)||(33551536-33551587)
chr5 (99-182)||(33552382-33552465)
chr5 (282-348)||(11959140-11959206)
chr5 (454-524)||(17747616-17747686)
chr5 (99-181)||(21335482-21335564)
chr5 (283-345)||(41306490-41306552)
chr5 (283-348)||(23044236-23044301)
chr5 (283-348)||(31863809-31863874)
chr5 (283-348)||(37215139-37215203)
chr5 (284-348)||(21335662-21335726)
chr5 (280-348)||(39192424-39192492)
chr5 (283-339)||(43491859-43491915)
chr5 (350-401)||(7270431-7270482)
chr5 (350-401)||(18031912-18031963)
chr5 (99-182)||(39192591-39192674)
chr5 (283-345)||(7625200-7625262)
chr5 (284-348)||(22936901-22936965)
chr5 (280-348)||(34831858-34831926)
chr5 (134-182)||(41876577-41876625)
chr5 (108-182)||(2453538-2453612)
chr5 (108-170)||(3195349-3195411)
chr5 (347-401)||(17663965-17664019)
chr5 (108-170)||(30764493-30764555)
chr5 (148-182)||(34832025-34832059)
chr5 (282-348)||(40583343-40583409)
chr5 (84-168)||(7625368-7625453)
chr5 (284-345)||(14375759-14375820)
chr5 (474-523)||(25329456-25329505)
chr5 (303-348)||(26292885-26292930)
chr5 (447-523)||(28442105-28442181)
chr5 (305-345)||(17748537-17748577)
chr5 (349-401)||(18240150-18240202)
chr5 (134-182)||(22936763-22936811)
[»] chr7 (70 HSPs)
chr7 (385-523)||(4694723-4694871)
chr7 (385-523)||(45287989-45288138)
chr7 (385-524)||(9865494-9865643)
chr7 (441-523)||(45291392-45291474)
chr7 (442-523)||(4596843-4596924)
chr7 (442-523)||(20081559-20081640)
chr7 (385-523)||(9080376-9080525)
chr7 (442-523)||(17729973-17730054)
chr7 (283-348)||(23224873-23224938)
chr7 (280-348)||(4595974-4596042)
chr7 (280-348)||(17730895-17730963)
chr7 (280-348)||(20594344-20594412)
chr7 (280-348)||(26557580-26557648)
chr7 (442-524)||(8276011-8276093)
chr7 (84-182)||(10345424-10345522)
chr7 (84-182)||(35961348-35961446)
chr7 (283-348)||(37415391-37415456)
chr7 (283-348)||(45287037-45287102)
chr7 (280-348)||(4542878-4542946)
chr7 (280-348)||(4546950-4547018)
chr7 (280-348)||(11919830-11919898)
chr7 (282-348)||(14683411-14683477)
chr7 (84-182)||(48645715-48645813)
chr7 (344-401)||(4694925-4694982)
chr7 (344-401)||(9865383-9865440)
chr7 (283-348)||(45290448-45290513)
chr7 (280-348)||(8277067-8277135)
chr7 (442-502)||(10344637-10344697)
chr7 (75-182)||(4695729-4695836)
chr7 (301-348)||(9132746-9132793)
chr7 (99-182)||(9864526-9864609)
chr7 (350-401)||(17730217-17730268)
chr7 (347-401)||(9273779-9273833)
chr7 (280-346)||(9864691-9864757)
chr7 (283-345)||(16165833-16165895)
chr7 (84-182)||(26557747-26557845)
chr7 (283-348)||(10345276-10345341)
chr7 (283-348)||(26136096-26136161)
chr7 (283-348)||(26144476-26144541)
chr7 (283-348)||(37166115-37166180)
chr7 (280-348)||(4695562-4695630)
chr7 (280-348)||(9271430-9271498)
chr7 (301-349)||(20080704-20080752)
chr7 (283-346)||(2441246-2441309)
chr7 (350-401)||(9080579-9080630)
chr7 (76-182)||(22611495-22611599)
chr7 (84-182)||(4595777-4595875)
chr7 (84-182)||(17731068-17731166)
chr7 (442-523)||(9273953-9274034)
chr7 (299-348)||(35961172-35961221)
chr7 (134-182)||(11919682-11919730)
chr7 (301-348)||(3067963-3068010)
chr7 (287-346)||(6603542-6603601)
chr7 (283-346)||(13449744-13449807)
chr7 (283-346)||(13842723-13842786)
chr7 (542-625)||(22620863-22620946)
chr7 (301-348)||(48645555-48645602)
chr7 (84-168)||(11397828-11397913)
chr7 (134-182)||(8277235-8277283)
chr7 (301-348)||(10469225-10469272)
chr7 (283-346)||(11398017-11398080)
chr7 (283-345)||(5242118-5242180)
chr7 (108-170)||(8398087-8398149)
chr7 (108-170)||(11825155-11825217)
chr7 (108-170)||(26153421-26153483)
chr7 (447-523)||(4542074-4542150)
chr7 (447-523)||(10431386-10431462)
chr7 (134-182)||(4543045-4543093)
chr7 (108-168)||(22232426-22232486)
chr7 (108-168)||(22254253-22254313)
[»] chr1 (47 HSPs)
chr1 (385-523)||(21019228-21019367)
chr1 (385-523)||(2404722-2404870)
chr1 (280-348)||(2405605-2405673)
chr1 (385-523)||(21108245-21108393)
chr1 (280-348)||(45941512-45941580)
chr1 (83-182)||(2405772-2405871)
chr1 (283-348)||(2794323-2794388)
chr1 (344-401)||(41058953-41059010)
chr1 (280-348)||(21107251-21107319)
chr1 (280-348)||(21111118-21111186)
chr1 (280-348)||(21114458-21114526)
chr1 (385-523)||(42021721-42021871)
chr1 (442-524)||(41059152-41059235)
chr1 (283-348)||(673033-673098)
chr1 (283-348)||(20398949-20399014)
chr1 (283-348)||(28111152-28111217)
chr1 (280-348)||(21018427-21018495)
chr1 (301-348)||(905666-905713)
chr1 (354-401)||(21108144-21108191)
chr1 (283-346)||(27536494-27536557)
chr1 (283-346)||(31204936-31204999)
chr1 (283-346)||(37183826-37183889)
chr1 (84-182)||(21110921-21111019)
chr1 (454-524)||(45961638-45961708)
chr1 (344-401)||(2404924-2404981)
chr1 (283-348)||(3796789-3796854)
chr1 (283-348)||(49498460-49498525)
chr1 (454-522)||(27537144-27537212)
chr1 (281-345)||(45960705-45960769)
chr1 (301-348)||(1950436-1950483)
chr1 (285-348)||(23021888-23021951)
chr1 (442-501)||(29644227-29644286)
chr1 (115-182)||(41058096-41058163)
chr1 (99-182)||(42022891-42022974)
chr1 (99-181)||(21018245-21018327)
chr1 (84-170)||(29642994-29643080)
chr1 (84-182)||(49852901-49852999)
chr1 (280-348)||(41058262-41058330)
chr1 (350-401)||(21019122-21019173)
chr1 (84-182)||(45941679-45941776)
chr1 (286-346)||(6070919-6070979)
chr1 (454-523)||(2793299-2793368)
chr1 (148-182)||(6070795-6070829)
chr1 (283-340)||(13430920-13430977)
chr1 (283-348)||(29643184-29643249)
chr1 (486-523)||(49147113-49147150)
chr1 (385-417)||(41059064-41059096)
[»] chr4 (116 HSPs)
chr4 (385-524)||(19819949-19820089)
chr4 (385-524)||(27677817-27677967)
chr4 (441-524)||(53010376-53010459)
chr4 (385-523)||(27691885-27692025)
chr4 (385-523)||(15430616-15430766)
chr4 (385-523)||(15437230-15437380)
chr4 (385-523)||(44164001-44164142)
chr4 (385-523)||(19826701-19826850)
chr4 (442-523)||(24044976-24045057)
chr4 (385-523)||(52007292-52007431)
chr4 (442-523)||(3718336-3718417)
chr4 (280-348)||(15445325-15445393)
chr4 (280-348)||(19827509-19827577)
chr4 (442-502)||(40794213-40794273)
chr4 (442-501)||(14571048-14571107)
chr4 (84-182)||(19820965-19821063)
chr4 (282-348)||(27014357-27014423)
chr4 (393-523)||(35509201-35509320)
chr4 (81-182)||(3720611-3720712)
chr4 (283-348)||(3797771-3797836)
chr4 (283-348)||(5670671-5670736)
chr4 (283-348)||(5672989-5673054)
chr4 (442-523)||(12782106-12782187)
chr4 (283-348)||(19859485-19859550)
chr4 (344-401)||(27677706-27677763)
chr4 (283-348)||(34017744-34017809)
chr4 (283-348)||(39501742-39501807)
chr4 (283-348)||(40616771-40616836)
chr4 (283-340)||(48637607-48637664)
chr4 (283-348)||(52530898-52530963)
chr4 (280-348)||(12782998-12783066)
chr4 (280-348)||(19820821-19820889)
chr4 (442-502)||(21419000-21419060)
chr4 (280-348)||(38283449-38283517)
chr4 (280-348)||(40795096-40795164)
chr4 (280-348)||(40903043-40903111)
chr4 (280-348)||(52006491-52006559)
chr4 (84-182)||(12786373-12786471)
chr4 (84-182)||(19827672-19827770)
chr4 (454-524)||(29323978-29324048)
chr4 (84-182)||(52006294-52006392)
chr4 (283-345)||(56198950-56199012)
chr4 (283-348)||(11195769-11195834)
chr4 (283-348)||(19864480-19864545)
chr4 (344-401)||(24044792-24044849)
chr4 (283-348)||(24150766-24150831)
chr4 (344-401)||(27691774-27691831)
chr4 (83-180)||(37102980-37103077)
chr4 (283-348)||(39498403-39498468)
chr4 (454-523)||(44809835-44809904)
chr4 (280-348)||(15429816-15429884)
chr4 (280-348)||(15436430-15436498)
chr4 (280-348)||(44164876-44164944)
chr4 (84-182)||(3797587-3797686)
chr4 (350-401)||(19820143-19820194)
chr4 (350-401)||(21419202-21419253)
chr4 (283-346)||(33927068-33927131)
chr4 (350-401)||(35509379-35509430)
chr4 (301-348)||(37103197-37103244)
chr4 (350-401)||(52007187-52007238)
chr4 (283-346)||(56195623-56195686)
chr4 (442-523)||(27013229-27013311)
chr4 (84-182)||(35510242-35510340)
chr4 (344-401)||(15430505-15430562)
chr4 (344-401)||(15437119-15437176)
chr4 (283-348)||(18673045-18673110)
chr4 (344-401)||(44164196-44164253)
chr4 (454-518)||(34320775-34320839)
chr4 (280-348)||(49270773-49270840)
chr4 (350-401)||(3718538-3718589)
chr4 (442-501)||(5680491-5680550)
chr4 (350-401)||(19826904-19826955)
chr4 (283-346)||(34319880-34319943)
chr4 (283-345)||(15405044-15405106)
chr4 (84-182)||(40795263-40795361)
chr4 (447-523)||(15431164-15431240)
chr4 (447-523)||(15437778-15437854)
chr4 (76-168)||(56199118-56199211)
chr4 (284-348)||(18911592-18911656)
chr4 (280-348)||(24044101-24044169)
chr4 (280-348)||(27677015-27677083)
chr4 (305-348)||(3719217-3719260)
chr4 (354-401)||(12782318-12782365)
chr4 (283-346)||(15812099-15812162)
chr4 (350-401)||(40794416-40794467)
chr4 (282-345)||(46955440-46955503)
chr4 (280-348)||(48415485-48415557)
chr4 (83-157)||(5681702-5681776)
chr4 (108-182)||(10386189-10386263)
chr4 (282-348)||(15432172-15432238)
chr4 (283-348)||(35510085-35510150)
chr4 (76-168)||(56195791-56195884)
chr4 (284-348)||(5706486-5706550)
chr4 (284-348)||(12238359-12238423)
chr4 (121-181)||(15445165-15445225)
chr4 (85-168)||(15811909-15811993)
chr4 (134-182)||(27014513-27014561)
chr4 (134-182)||(38283302-38283350)
chr4 (84-170)||(18860035-18860119)
chr4 (283-346)||(29324921-29324983)
chr4 (472-523)||(49269735-49269786)
chr4 (283-337)||(8871728-8871782)
chr4 (283-345)||(8877463-8877525)
chr4 (99-168)||(11649236-11649306)
chr4 (144-182)||(12238510-12238548)
chr4 (84-182)||(24043902-24044000)
chr4 (385-419)||(24044903-24044937)
chr4 (148-182)||(27676882-27676916)
chr4 (447-523)||(3798720-3798796)
chr4 (121-182)||(15429656-15429717)
chr4 (121-182)||(15436270-15436331)
chr4 (283-348)||(21419882-21419947)
chr4 (283-348)||(25962152-25962217)
chr4 (283-348)||(53009521-53009586)
chr4 (349-401)||(8875418-8875470)
chr4 (134-182)||(40902896-40902944)
[»] chr3 (121 HSPs)
chr3 (385-523)||(10880776-10880924)
chr3 (385-524)||(29344624-29344774)
chr3 (385-523)||(53814971-53815120)
chr3 (385-523)||(34984602-34984758)
chr3 (393-523)||(41976321-41976461)
chr3 (442-525)||(16243164-16243247)
chr3 (406-503)||(43808898-43809003)
chr3 (280-348)||(20728594-20728662)
chr3 (442-530)||(54460360-54460448)
chr3 (384-523)||(20729336-20729477)
chr3 (283-348)||(24125678-24125743)
chr3 (283-348)||(24128955-24129020)
chr3 (280-348)||(2775661-2775729)
chr3 (280-348)||(2778904-2778972)
chr3 (280-348)||(16244052-16244120)
chr3 (280-348)||(25584856-25584924)
chr3 (280-348)||(45896560-45896628)
chr3 (282-348)||(8461436-8461502)
chr3 (283-348)||(2873743-2873808)
chr3 (283-348)||(6922699-6922764)
chr3 (283-348)||(7486750-7486815)
chr3 (283-348)||(30690915-30690980)
chr3 (283-348)||(32287273-32287338)
chr3 (344-401)||(34984491-34984548)
chr3 (344-401)||(41976493-41976550)
chr3 (283-348)||(53816007-53816072)
chr3 (73-182)||(54461347-54461456)
chr3 (442-515)||(54736769-54736842)
chr3 (442-522)||(9380012-9380092)
chr3 (280-348)||(29343821-29343889)
chr3 (280-348)||(43927014-43927082)
chr3 (83-182)||(10902286-10902385)
chr3 (442-501)||(16185575-16185634)
chr3 (442-501)||(35411699-35411758)
chr3 (442-523)||(3839790-3839874)
chr3 (283-345)||(28266099-28266161)
chr3 (283-348)||(11190706-11190771)
chr3 (283-348)||(11784945-11785010)
chr3 (283-348)||(16184637-16184702)
chr3 (446-523)||(19305470-19305547)
chr3 (344-401)||(31548753-31548810)
chr3 (280-348)||(10881659-10881727)
chr3 (280-340)||(10902127-10902187)
chr3 (280-348)||(31549351-31549419)
chr3 (280-348)||(49742866-49742934)
chr3 (280-348)||(52309562-52309630)
chr3 (99-182)||(10881826-10881909)
chr3 (99-182)||(20728410-20728493)
chr3 (442-501)||(31548573-31548632)
chr3 (283-346)||(47051677-47051740)
chr3 (283-346)||(50461498-50461561)
chr3 (283-345)||(6434728-6434790)
chr3 (84-178)||(52200256-52200350)
chr3 (283-348)||(539006-539071)
chr3 (385-447)||(6445513-6445577)
chr3 (283-348)||(17528711-17528776)
chr3 (454-523)||(19302295-19302364)
chr3 (283-348)||(22416784-22416849)
chr3 (283-348)||(27092073-27092138)
chr3 (283-348)||(37408860-37408925)
chr3 (283-340)||(43809767-43809824)
chr3 (283-348)||(46885119-46885184)
chr3 (283-348)||(54723921-54723986)
chr3 (84-180)||(10885203-10885299)
chr3 (301-348)||(10885036-10885083)
chr3 (350-401)||(16243374-16243425)
chr3 (84-182)||(28007829-28007927)
chr3 (344-398)||(29344513-29344567)
chr3 (108-182)||(31549530-31549604)
chr3 (301-339)||(32367098-32367136)
chr3 (76-182)||(41977347-41977453)
chr3 (84-182)||(52309382-52309480)
chr3 (447-523)||(10884018-10884094)
chr3 (283-348)||(12561184-12561249)
chr3 (447-523)||(23299477-23299553)
chr3 (283-348)||(28008021-28008086)
chr3 (283-340)||(35751628-35751685)
chr3 (283-348)||(52990879-52990944)
chr3 (283-348)||(54720150-54720215)
chr3 (349-401)||(3293591-3293643)
chr3 (280-348)||(3840696-3840764)
chr3 (280-348)||(41977180-41977248)
chr3 (350-401)||(3840016-3840067)
chr3 (283-346)||(47055107-47055170)
chr3 (128-182)||(16184486-16184540)
chr3 (84-182)||(16244219-16244317)
chr3 (385-448)||(54460460-54460525)
chr3 (284-346)||(55031947-55032009)
chr3 (284-346)||(55034807-55034869)
chr3 (447-523)||(538015-538091)
chr3 (447-523)||(6921890-6921966)
chr3 (344-401)||(10880978-10881035)
chr3 (303-348)||(17531626-17531671)
chr3 (283-348)||(23298565-23298630)
chr3 (283-348)||(25442809-25442874)
chr3 (283-348)||(30219955-30220020)
chr3 (303-348)||(48064005-48064050)
chr3 (138-182)||(8461307-8461351)
chr3 (284-348)||(10106551-10106614)
chr3 (284-348)||(18641723-18641787)
chr3 (284-348)||(18644719-18644783)
chr3 (134-182)||(43927186-43927234)
chr3 (284-348)||(52200092-52200156)
chr3 (108-170)||(2279416-2279478)
chr3 (148-182)||(2775831-2775865)
chr3 (148-182)||(2779073-2779107)
chr3 (108-170)||(2784376-2784438)
chr3 (294-336)||(9392925-9392967)
chr3 (385-419)||(16243286-16243320)
chr3 (148-182)||(45896727-45896761)
chr3 (148-182)||(49742733-49742767)
chr3 (283-348)||(17039972-17040037)
chr3 (283-348)||(17141587-17141652)
chr3 (385-422)||(28265112-28265149)
chr3 (127-168)||(47055276-47055317)
chr3 (84-177)||(55034681-55034774)
chr3 (385-417)||(3839930-3839962)
chr3 (134-182)||(24125836-24125884)
chr3 (284-348)||(35412689-35412753)
chr3 (134-182)||(35412842-35412890)
chr3 (483-523)||(49743785-49743825)
[»] scaffold0520 (5 HSPs)
scaffold0520 (385-523)||(4723-4880)
scaffold0520 (344-400)||(4631-4687)
scaffold0520 (280-348)||(8179-8247)
scaffold0520 (84-182)||(1312-1410)
scaffold0520 (280-348)||(1509-1576)
[»] chr6 (56 HSPs)
chr6 (383-524)||(28666044-28666177)
chr6 (385-525)||(10289184-10289334)
chr6 (442-524)||(9953035-9953117)
chr6 (280-348)||(30655540-30655608)
chr6 (283-348)||(9839357-9839422)
chr6 (344-401)||(10289388-10289445)
chr6 (283-348)||(11402353-11402418)
chr6 (280-348)||(17106570-17106638)
chr6 (282-348)||(9954059-9954125)
chr6 (283-348)||(2379326-2379391)
chr6 (283-348)||(14281483-14281548)
chr6 (283-348)||(24400275-24400340)
chr6 (283-348)||(24410394-24410459)
chr6 (280-348)||(20185840-20185908)
chr6 (280-348)||(22150083-22150151)
chr6 (83-182)||(10290237-10290336)
chr6 (283-346)||(26942398-26942461)
chr6 (350-401)||(28665920-28665971)
chr6 (282-348)||(10290068-10290134)
chr6 (108-182)||(23842586-23842660)
chr6 (283-348)||(3596744-3596809)
chr6 (283-348)||(4512572-4512637)
chr6 (283-348)||(6513352-6513417)
chr6 (283-348)||(13005285-13005350)
chr6 (283-348)||(18855988-18856053)
chr6 (283-348)||(19476098-19476163)
chr6 (283-348)||(22561126-22561191)
chr6 (283-348)||(23384715-23384780)
chr6 (283-348)||(26896222-26896287)
chr6 (301-348)||(2372349-2372396)
chr6 (442-489)||(13004434-13004481)
chr6 (301-348)||(13947114-13947161)
chr6 (283-345)||(7128398-7128460)
chr6 (282-348)||(32109764-32109830)
chr6 (280-348)||(5738039-5738112)
chr6 (283-348)||(24155329-24155394)
chr6 (283-336)||(28107750-28107803)
chr6 (349-401)||(22561782-22561834)
chr6 (301-348)||(11125678-11125725)
chr6 (83-182)||(17106391-17106490)
chr6 (281-347)||(23847865-23847934)
chr6 (108-182)||(23848034-23848108)
chr6 (453-502)||(20181294-20181343)
chr6 (453-502)||(22154648-22154697)
chr6 (280-348)||(23842759-23842826)
chr6 (282-348)||(1125697-1125763)
chr6 (148-182)||(11188035-11188069)
chr6 (148-182)||(11729167-11729201)
chr6 (486-524)||(12987037-12987075)
chr6 (108-170)||(14966487-14966549)
chr6 (99-157)||(20186020-20186078)
chr6 (99-157)||(22149913-22149971)
chr6 (148-182)||(30655710-30655744)
chr6 (134-182)||(23381993-23382041)
chr6 (134-182)||(23384573-23384621)
chr6 (301-348)||(28230690-28230738)
[»] chr8 (54 HSPs)
chr8 (385-523)||(12582218-12582366)
chr8 (280-348)||(20887626-20887694)
chr8 (75-182)||(5538534-5538641)
chr8 (280-346)||(5584356-5584422)
chr8 (393-523)||(5981083-5981220)
chr8 (108-182)||(23644069-23644143)
chr8 (442-524)||(45156837-45156919)
chr8 (283-348)||(12516415-12516480)
chr8 (283-348)||(16953868-16953933)
chr8 (350-401)||(12582420-12582471)
chr8 (99-182)||(14421991-14422074)
chr8 (84-182)||(12583269-12583367)
chr8 (344-401)||(5980964-5981021)
chr8 (283-348)||(10663990-10664055)
chr8 (283-348)||(14421837-14421902)
chr8 (283-348)||(25231172-25231237)
chr8 (283-348)||(38248362-38248427)
chr8 (445-501)||(5540917-5540973)
chr8 (442-501)||(14420886-14420945)
chr8 (283-346)||(18825850-18825913)
chr8 (460-523)||(18826771-18826834)
chr8 (282-345)||(25591441-25591504)
chr8 (443-523)||(30640505-30640587)
chr8 (301-348)||(33883331-33883378)
chr8 (283-346)||(36710599-36710662)
chr8 (282-348)||(25594619-25594685)
chr8 (283-348)||(10498177-10498242)
chr8 (385-447)||(17895369-17895433)
chr8 (280-345)||(22173883-22173948)
chr8 (283-348)||(23619327-23619392)
chr8 (283-348)||(45155232-45155297)
chr8 (301-348)||(18721262-18721309)
chr8 (283-346)||(18824357-18824420)
chr8 (108-182)||(5980089-5980163)
chr8 (283-348)||(5980276-5980341)
chr8 (280-348)||(12583099-12583170)
chr8 (283-348)||(17931072-17931137)
chr8 (283-348)||(21279732-21279797)
chr8 (283-340)||(23643919-23643976)
chr8 (442-524)||(19792925-19793009)
chr8 (283-346)||(14589584-14589647)
chr8 (301-348)||(44027074-44027121)
chr8 (441-499)||(25228039-25228096)
chr8 (108-182)||(30645730-30645804)
chr8 (287-348)||(13196948-13197009)
chr8 (303-348)||(31284765-31284810)
chr8 (283-348)||(33419747-33419812)
chr8 (75-167)||(33883113-33883206)
chr8 (134-182)||(23597456-23597504)
chr8 (148-182)||(20887793-20887827)
chr8 (148-182)||(22173769-22173803)
chr8 (99-168)||(41836225-41836295)
chr8 (295-348)||(2560644-2560697)
chr8 (459-523)||(10663011-10663075)
[»] scaffold0757 (4 HSPs)
scaffold0757 (385-523)||(4563-4713)
scaffold0757 (84-182)||(5613-5711)
scaffold0757 (350-401)||(4767-4818)
scaffold0757 (280-348)||(5446-5514)
[»] scaffold0270 (4 HSPs)
scaffold0270 (385-523)||(911-1060)
scaffold0270 (442-499)||(4339-4396)
scaffold0270 (442-499)||(11469-11526)
scaffold0270 (283-346)||(26-89)
[»] scaffold1755 (2 HSPs)
scaffold1755 (280-348)||(215-283)
scaffold1755 (115-182)||(394-461)
[»] scaffold0015 (3 HSPs)
scaffold0015 (280-348)||(198241-198309)
scaffold0015 (442-501)||(197264-197323)
scaffold0015 (84-182)||(198405-198503)
[»] scaffold0007 (2 HSPs)
scaffold0007 (280-348)||(248612-248680)
scaffold0007 (99-178)||(248785-248864)
[»] scaffold0005 (3 HSPs)
scaffold0005 (442-501)||(246269-246328)
scaffold0005 (283-348)||(293117-293182)
scaffold0005 (134-182)||(293270-293318)
[»] scaffold1063 (2 HSPs)
scaffold1063 (84-182)||(2748-2846)
scaffold1063 (284-348)||(2595-2659)
[»] scaffold0381 (3 HSPs)
scaffold0381 (282-348)||(5360-5426)
scaffold0381 (442-523)||(6472-6554)
scaffold0381 (134-182)||(5222-5270)
[»] scaffold0080 (3 HSPs)
scaffold0080 (84-182)||(27372-27470)
scaffold0080 (280-348)||(27203-27271)
scaffold0080 (441-500)||(26277-26336)
[»] scaffold0427 (1 HSPs)
scaffold0427 (283-348)||(3751-3816)
[»] scaffold0045 (2 HSPs)
scaffold0045 (283-346)||(89866-89929)
scaffold0045 (84-168)||(90035-90119)
[»] scaffold2073 (1 HSPs)
scaffold2073 (287-348)||(834-895)
[»] scaffold0690 (2 HSPs)
scaffold0690 (283-348)||(7675-7740)
scaffold0690 (148-182)||(7548-7582)
[»] scaffold0412 (1 HSPs)
scaffold0412 (283-348)||(225-290)
[»] scaffold0250 (1 HSPs)
scaffold0250 (283-348)||(19490-19555)
[»] scaffold0126 (1 HSPs)
scaffold0126 (282-345)||(14281-14344)
[»] scaffold1785 (1 HSPs)
scaffold1785 (294-348)||(1-55)
[»] scaffold1208 (2 HSPs)
scaffold1208 (282-348)||(279-345)
scaffold1208 (148-180)||(437-469)
[»] scaffold0191 (1 HSPs)
scaffold0191 (282-348)||(4010-4076)
[»] scaffold0035 (2 HSPs)
scaffold0035 (294-348)||(62611-62665)
scaffold0035 (283-348)||(63953-64018)
[»] scaffold1993 (1 HSPs)
scaffold1993 (442-523)||(1045-1126)
[»] scaffold0321 (1 HSPs)
scaffold0321 (283-348)||(2968-3033)
[»] scaffold1809 (1 HSPs)
scaffold1809 (280-336)||(171-227)
[»] scaffold0009 (1 HSPs)
scaffold0009 (283-345)||(241597-241659)
[»] scaffold0066 (1 HSPs)
scaffold0066 (283-348)||(57552-57617)
[»] scaffold0048 (1 HSPs)
scaffold0048 (283-348)||(15506-15571)
[»] scaffold0065 (1 HSPs)
scaffold0065 (301-348)||(58662-58709)
[»] scaffold0218 (1 HSPs)
scaffold0218 (302-348)||(10503-10549)
[»] scaffold0084 (2 HSPs)
scaffold0084 (283-348)||(19374-19439)
scaffold0084 (283-348)||(29459-29524)
[»] scaffold0360 (1 HSPs)
scaffold0360 (108-170)||(6542-6604)
[»] scaffold0214 (2 HSPs)
scaffold0214 (108-170)||(13874-13936)
scaffold0214 (108-170)||(27890-27952)
[»] scaffold0038 (1 HSPs)
scaffold0038 (301-348)||(31188-31236)


Alignment Details
Target: chr2 (Bit Score: 157; Significance: 4e-83; HSPs: 85)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 389 - 631
Target Start/End: Complemental strand, 13136906 - 13136654
Alignment:
Q  389 gtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagttttttcttgct---------gcttaatcttgcttgtgaattcaaaaa 478  Q
    |||||| |||||||||||||| |||||| |||| ||||| ||||||||||||||||||||||||         ||||||||||| ||||||| |||||||    
T  13136906 gtgtcatgtttttcagtaatcatgacacaatgctttttttcagcttcttcagttttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaa 13136807  T
Q  479 tatcataaaaagactctaaaaataataaatgattgactgtcatcaggaaacatgtaatgtgaaaatgtaatgaatcaagatagttccattataataaaat 578  Q
    |||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  13136806 tatcataaaatgactctaaaaataacaaatgactgactgtcattaggaaacatgtaatatgaaaatgtaatgaatcaagataggtccatcataataaaat 13136707  T
Q  579 aggccatgttatattagatgaagtcgtgtttttagaaggatctagagtgatga 631  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13136706 aggccatgttatattagatgaagtcgtgtttttagaaggatctagattgatga 13136654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 393 - 523
Target Start/End: Complemental strand, 43723035 - 43722904
Alignment:
Q  393 cacgtttttcagtaatcgtgacacgatgc-ctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaaga 491  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43723035 cacgtttttcagtaatcgtgacacgatgctctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaga 43722936  T
Q  492 ctctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||  ||||||||||||||||||    
T  43722935 ctctaaaaataacgaatgattgactgtcatca 43722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 6826114 - 6825974
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt--cagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    |||||||| ||||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  6826114 aatcgtgttacgtttttcagtaatcgtgacacgatgcctttttttcatcttcttcagttttttcttgatgcttaatcttgcttgtgaactcaaaaatatc 6826015  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||| |||| ||||  ||||||||||||||||||    
T  6826014 ataaaaagactttaaatataacgaatgattgactgtcatca 6825974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 13137388 - 13137257
Alignment:
Q  7 tccaatggagtcacgaaaggttccctaaataattctatctttttcggatgtaattttggtaaatggaaatgataggtttttagtaagcgtaataaaaatg 106  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||| ||| ||| ||||||||    
T  13137388 tccaatggagtcacgaaaggttccctaaataattctatctttttaggttgtaattttgataaatggaaatgatagatttttagcaagtgtactaaaaatg 13137289  T
Q  107 aatcgaaataatacaataatttcgtatccacg 138  Q
     |||||||||||| ||||| ||||||||||||    
T  13137288 catcgaaataataaaataagttcgtatccacg 13137257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 280 - 401
Target Start/End: Complemental strand, 13137085 - 13136964
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattcttccttgtgtaacaaaccacccaaattaaggtt 379  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||| ||||    
T  13137085 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactacacctattcttccttgtctaacaaatcacccaaattagggtt 13136986  T
Q  380 tccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||    
T  13136985 tccataatcgtgtcacgttttt 13136964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 388 - 524
Target Start/End: Complemental strand, 5105086 - 5104952
Alignment:
Q  388 cgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataa 486  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  5105086 cgtgtcacgtttttcagtaatcgtgacacgatcccctttttcagcttcttcagttttt-cttgctgcttaatcttgcttgtgaactcaaaaatatcataa 5104988  T
Q  487 aaagactctaaaaataataaatgattgactgtcatcag 524  Q
    ||| |||||||||  | | ||||| |||||||||||||    
T  5104987 aaaaactctaaaa--agtgaatgactgactgtcatcag 5104952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 3874630 - 3874482
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttttcttgct---------gcttaatcttgcttgtgaattca 474  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||| ||||||||||||         ||||||||||| ||||||| |||    
T  3874630 aatcgtgacacgtttttcaataatcgtgacacgatgccctttttcagtttcttcaattttttcttgcttttcttgctgcttaatcttgtttgtgaactca 3874531  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  3874530 aaaatatcctaaaaagactctaaaaataatgaatgactgactgtcatca 3874482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 13137257 - 13137132
Alignment:
Q  56 gtaattttggtaaatggaaatgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctc 155  Q
    ||||||||| |||||| ||||||||| ||||||| ||| ||| |||||||| |||||||||||| ||||| |||||||||||||||  ||| ||||||||    
T  13137257 gtaattttgataaatgaaaatgatagatttttagcaagtgtactaaaaatgcatcgaaataataaaataagttcgtatccacgaggactgtcttaatctc 13137158  T
Q  156 aatttagaaataaagcaaatatttag 181  Q
    ||||||| ||||||| ||||||||||    
T  13137157 aatttagcaataaagtaaatatttag 13137132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 13972732 - 13972813
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  13972732 ttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 13972813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 423 - 523
Target Start/End: Complemental strand, 10600051 - 10599951
Alignment:
Q  423 tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatc 522  Q
    ||||||||||| |||   ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| | ||||| |||||||||||    
T  10600051 tttttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagattctaaaaatagtgaatgactgactgtcatc 10599952  T
Q  523 a 523  Q
    |    
T  10599951 a 10599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 5665905 - 5665830
Alignment:
Q  448 tgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  5665905 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgactgtcatca 5665830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 9185388 - 9185453
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9185388 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 9185453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 13971855 - 13971923
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  13971855 tgaagagagatgatatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 13971923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 40781616 - 40781548
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  40781616 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 40781548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 25959651 - 25959717
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  25959651 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 6826225 - 6826168
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6826225 ttcttccttgtgtaacaaaccacccaaattagggtttccataattgtgtcacgttttt 6826168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 9188616 - 9188681
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9188616 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 29440636 - 29440571
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  29440636 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 29440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 37279640 - 37279705
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37279640 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37279705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 5666661 - 5666594
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  5666661 tgaagagagatgagatcaggtctttcgaat-atctatgttcccctaattggtatactgcacatattctt 5666594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 31585901 - 31585969
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  31585901 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 31585969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 43207851 - 43207919
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  43207851 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 43207919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 43723844 - 43723776
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  43723844 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 43723776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 25820617 - 25820715
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||||| |||||||||||    
T  25820617 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagg 25820715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 43724041 - 43723943
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||  |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  43724041 ttttagcaagtgtactaaaaatatatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 43723943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 22021209 - 22021144
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  22021209 agagagatgagataaggtctttcgaatcatctatgttaccctaattggtatactgcacctattctt 22021144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 25874322 - 25874257
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  25874322 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactacacctattctt 25874257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 26366254 - 26366157
Alignment:
Q  85 tttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||  | ||||||| |||||||||||    
T  26366254 tttagtaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaattcggcaataaagtaaatatttagg 26366157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 523
Target Start/End: Complemental strand, 38014705 - 38014636
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||  |||||| ||||||||||||    
T  38014705 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 38014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 45493120 - 45493185
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||    
T  45493120 agagagatgagatcaggtttttcgagtcatctatgtttccctaattggtatactgcacctattctt 45493185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 45500862 - 45500927
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||    
T  45500862 agagagatgagatcaggtttttcgagtcatctatgtttccctaattggtatactgcacctattctt 45500927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 15470602 - 15470546
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatact 336  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  15470602 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 15470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 5666109 - 5666058
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  5666109 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 5666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 31427505 - 31427568
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  31427505 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 31427568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 5105871 - 5105805
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    ||||||||||||| |||||| ||||| ||| ||||||||| |||||||||||||||||||| |||||    
T  5105871 tgaagagagatgagatcaggtctttcaaattatctatgttcccctaattggtatactgcacctattc 5105805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 25138701 - 25138799
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||  |||||| ||||| ||||| ||||||||||||||  |||| ||||||||||||||| ||||||| ||||| |||||    
T  25138701 ttttagcaagtgtactaaaaatatatcgaagtaataaaataagttcgtatccacgagaaatgtgttaatctcaatttagcaataaagtaaatacttagg 25138799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 454 - 524
Target Start/End: Original strand, 31430569 - 31430639
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||  |||||| | |||||||||||    
T  31430569 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactaactgtcatcag 31430639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 1386386 - 1386451
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  1386386 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacttattctt 1386451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 3874741 - 3874684
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  3874741 ttctgccttgtgtaacaaaccaccaaaattagggtttccataatcatgtcacgttttt 3874684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 6826915 - 6826850
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||| |||||| |||||| ||||||||||||||||| | |||||||||||||||||||| ||||    
T  6826915 tgaagatagatgagatcaggtctttcgaatcatctatgctcccctaattggtatactgcacctatt 6826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 8888777 - 8888712
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  8888777 agagagatgagattaggtctttcaaatcatctatgttcccctaattggtatactgcacctattctt 8888712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 11347863 - 11347924
Alignment:
Q  287 agatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  11347863 agatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 11347924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 12219937 - 12219872
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  12219937 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 12219872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 16788469 - 16788389
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||| |||||||||||| |||||| |||||| |||||| ||||||||||  |||||| ||||||||||||    
T  16788469 ttttcttgttgcttaagcttgcttgtgaactcaaaattatcat-aaaagattctaaaaatagcaaatgactgactgtcatca 16788389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 24235233 - 24235172
Alignment:
Q  287 agatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  24235233 agatgagatcaggtctttcgaattatctatgttcccctaattggtatactgcacctattctt 24235172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 24238505 - 24238444
Alignment:
Q  287 agatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  24238505 agatgagatcaggtctttcgaattatctatgttcccctaattggtatactgcacctattctt 24238444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 25138895 - 25138960
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||| ||| || ||||||||||||||||||||||| |||||||    
T  25138895 agagagatgagatcaggtctttcgaattatcgatatttccctaattggtatactgcacctattctt 25138960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 25870925 - 25870860
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||| || ||| |||||||    
T  25870925 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatgctacacctattctt 25870860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 33310808 - 33310752
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgca 339  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||    
T  33310808 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgca 33310752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 42368672 - 42368740
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | |||||| ||||| |||||| |||||| |||||||||||||||||||| |||||||    
T  42368672 tgaagagagataagatcaggtctttcaaatcatttatgttcccctaattggtatactgcacctattctt 42368740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 3875410 - 3875363
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3875410 ctttcgaatcacctatgttcccctaattggtatactgcacatattctt 3875363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 15470800 - 15470701
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||| |  ||||||||||    
T  15470800 tttttagcaagggtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaggttaatatttagg 15470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 45457303 - 45457240
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||||| ||| ||||||||| |||||||||| |||||    
T  45457303 agagagatgagatcaggtctttcgaatcatctaagttcccctaattgttatactgcacctattc 45457240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 6827112 - 6827014
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| ||||| || ||| || ||||| ||||| ||| |||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  6827112 ttttagcaagtgtactaaaattgcatcaaagtaataaaataagttcatatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 6827014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 13971675 - 13971773
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| || ||||||||||||  | | ||||||||||||||| |||||||  ||||||||||    
T  13971675 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttggtatccacgaggactttgttaatctcaatttagcaataaagtgaatatttagg 13971773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 16790721 - 16790783
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  16790721 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 16790783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 30274731 - 30274797
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | || | |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  30274731 aagagagatgagagcatgtctttcgaatcatctatgttctcctaattggtatactgcacctattctt 30274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 9966333 - 9966398
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||| | |||| |||||||||||||| |||||||||||||| ||||| |||||||    
T  9966333 agagagatgagatcaagtcttttgaatcatctatgttcccctaattggtatattgcacctattctt 9966398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 27266930 - 27266865
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||||||| ||||  |||||||    
T  27266930 agagagatgagatcaggtctttcaaatcatctatgttcccctaattggtataatgcagctattctt 27266865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 40259123 - 40259168
Alignment:
Q  303 ttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  40259123 ttcgaatcatctatgttcccctaattggtatactgcacctattctt 40259168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 5105180 - 5105124
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtttt 400  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||  |||||||    
T  5105180 ttcttccttgtgtaacaaacaaccaaaattagggtttccataatcgtgctacgtttt 5105124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 43723154 - 43723098
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtttt 400  Q
    |||| |||| ||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  43723154 ttctgccttctgtaacaaaccacccaaattagggttcccataattgtgtcacgtttt 43723098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 16179250 - 16179203
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  16179250 ctttcgaatcatcgatgttcccctaattggtatactgcatatattctt 16179203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 38015660 - 38015597
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| ||||||||| ||||||| || |||||    
T  38015660 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattgatatactgaacctattc 38015597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 45454015 - 45453952
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| |||||||||||| || ||||| |||||||||||| ||||| |||||    
T  45454015 agagagatgagatcaggtctttcgaatcatataagtttctctaattggtataatgcacctattc 45453952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 13972656 - 13972717
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt 444  Q
    |||||||||||||||| |||||||| ||||||||| ||  |||||||| |||||||||||||    
T  13972656 aatcgtgtcacgttttccagtaatcatgacacgatccccttttttcagtttcttcagttttt 13972717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 523
Target Start/End: Complemental strand, 25873272 - 25873203
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| |||||||||||| |||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  25873272 ttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 30926682 - 30926621
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||||||||| |||||||||| |||  ||||||||||||| |||||||||| ||||    
T  30926682 agagagatgaaatcaggtctttcgaatcctct-ggtttccctaattgatatactgcacctatt 30926621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 22630982 - 22630917
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||| |||||| || ||||||||||||||||| |||||||    
T  22630982 agagagatgagtttaggtctttcgaatcatttatgttcccttaattggtatactgcacctattctt 22630917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 37937183 - 37937248
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||| ||||| ||||||||||||||| |||| |||||||    
T  37937183 agagagatgagtttaggtctttcgaatcatcgatgttcccctaattggtataccgcacctattctt 37937248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 45457502 - 45457409
Alignment:
Q  76 tgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||||||| ||| ||| |||| ||| |||||| ||||| ||| || |||||||||||||||  ||| ||||||||||||||| |||||    
T  45457502 tgatagatttttagcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataa 45457409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 25820811 - 25820875
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  25820811 gagagatgagactaggtctttcgaatcatcgatgttcccctaattgatatactgcacctattctt 25820875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 13972551 - 13972602
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| | |||||||||| |||||| ||||||    
T  13972551 cttgtgtaacaaaccacctaaattaggatttccataattgtgtcatgttttt 13972602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 31427314 - 31427413
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||| || ||||||||||||| |  ||| ||||||||||||||| ||||| |  ||||||||||    
T  31427314 ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaagactgtgttaatctcaatttagcaataaggttaatatttagg 31427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 40781813 - 40781715
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||| ||| ||| |||||| | |||||| ||||| || ||| ||||  |||| |||  ||| ||||||||||||||||||||||| |||||||||||    
T  40781813 tttttagcaagtgtactaaaaacgtatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttagg 40781715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 1503221 - 1503283
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  1503221 atcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaag 1503283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 1506425 - 1506487
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  1506425 atcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaag 1506487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 13518621 - 13518559
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  13518621 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 13518559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 454 - 523
Target Start/End: Complemental strand, 25869904 - 25869835
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| ||| |||||||| |||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  25869904 ttaaactttcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 42368537 - 42368571
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  42368537 ttaatctcaatttagaaataaagtaaatatttagg 42368571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 43207716 - 43207750
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  43207716 ttaatctcaatttagaaataaagtaaatatttagg 43207750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Original strand, 25139971 - 25140016
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaa 499  Q
    |||| ||| |||||||| |||||||||||||||||| |||||||||    
T  25139971 ttaagcttacttgtgaactcaaaaatatcataaaaaaactctaaaa 25140016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 36808260 - 36808301
Alignment:
Q  127 ttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||||||||||||  ||||||||||||||||||| |||||    
T  36808260 ttcgtatccacgaggactgtattaatctcaatttagcaataa 36808301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 36808406 - 36808471
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||| |||| | || ||| |||||||||||| ||||||| |||||||    
T  36808406 agagagatgagatcaggtctttcaaatcctttaagttcccctaattggtacactgcacctattctt 36808471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 40780698 - 40780658
Alignment:
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  40780698 ataaaaagactctaaaaatagcgaatgattgactgtcatca 40780658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 6e-45; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 30065702 - 30065562
Alignment:
Q  385 aatcgtgtcacgtttttc-agtaatcgtgacacgatgcctttttca-gcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    |||||||||||||||||  ||||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30065702 aatcgtgtcacgtttttttagtaatcgtgacacgatgccttttttaagctttttcagttttttcttgttgcttaatcttgcttgtgaattcaaaaatatc 30065603  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||||||||  ||||| ||| ||||||||    
T  30065602 ataaaaagactctaaaaataacgaatgaatgattgtcatca 30065562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 385 - 501
Target Start/End: Complemental strand, 2836819 - 2836702
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    ||||||| ||||||||||||||||||||||||||| ||  |||||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  2836819 aatcgtgacacgtttttcagtaatcgtgacacgattcccttttttcagtttcttcagttttt-cttgctgcttaagtttgcttgtgaactcaaaaatatc 2836721  T
Q  483 ataaaaagactctaaaaat 501  Q
    |||||||||||||||||||    
T  2836720 ataaaaagactctaaaaat 2836702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 441 - 521
Target Start/End: Complemental strand, 39191413 - 39191333
Alignment:
Q  441 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcat 521  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  39191413 tttttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaataacaaatgattgactgtcat 39191333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 28788252 - 28788401
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttt---------tcttgctgcttaatcttgcttgtgaattc 473  Q
    ||||||| ||||||||||||||||| |||||||||||| |  |||||| |||||||| ||||         ||||||||||||| |||||||||||| |     
T  28788252 aatcgtgacacgtttttcagtaatcatgacacgatgccctcttttcagtttcttcagatttttcttgtttttcttgctgcttaagcttgcttgtgaacta 28788351  T
Q  474 aaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  28788352 aaaaatatcataaaaagactctaaaaatagcaaatgactgactgtcatca 28788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 7270377 - 7270241
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagtttttt-cttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    ||||||| ||| ||||||| |||| ||||||||||||| |||||||| |||||||||||||| ||||    ||  ||||||||||||| |||||||||||    
T  7270377 aatcgtgacacatttttcaataatagtgacacgatgccctttttcagtttcttcagtttttttcttg----tttttcttgcttgtgaactcaaaaatatc 7270282  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||   |||||  |||||||||||    
T  7270281 ataaaaagactctaaaaatagcgaatgacagactgtcatca 7270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 393 - 502
Target Start/End: Complemental strand, 18031850 - 18031731
Alignment:
Q  393 cacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    ||||||||||||||||||||||||||| ||  |||||||| |||||||||||||        ||||||||||||| ||||||| |||| || ||||||||    
T  18031850 cacgtttttcagtaatcgtgacacgattccattttttcagtttcttcagtttttcttgcttttcttgctgcttaaacttgcttttgaactcgaaaatatc 18031751  T
Q  483 ataaaaagactctaaaaata 502  Q
    ||||||||||||||||||||    
T  18031750 ataaaaagactctaaaaata 18031731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 385 - 499
Target Start/End: Original strand, 4100284 - 4100413
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-------cagcttcttcagtttt--------ttcttgctgcttaatcttgcttgtga 469  Q
    ||||||||||||||||| ||||||||||||||||| |||||||       ||| ||||||||||||        |||||||||||||||||||| |||||    
T  4100284 aatcgtgtcacgtttttgagtaatcgtgacacgatccctttttttttcttcagtttcttcagttttccttgcttttcttgctgcttaatcttgcctgtga 4100383  T
Q  470 attcaaaaatatcataaaaagactctaaaa 499  Q
    | ||||||||||||||||||||||||||||    
T  4100384 actcaaaaatatcataaaaagactctaaaa 4100413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 41876724 - 41876792
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  41876724 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 41876792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 32837164 - 32837105
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  32837164 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 32837105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 37214847 - 37214788
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  37214847 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 37214788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 40916739 - 40916889
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattcaa 475  Q
    ||||||| ||| ||||||||||||||||||||||| || |||||||| |||||| ||||||        ||||| ||||||| |||||||||||| ||||    
T  40916739 aatcgtgacacatttttcagtaatcgtgacacgatcccctttttcagtttcttcggtttttcttgcttttcttgttgcttaagcttgcttgtgaactcaa 40916838  T
Q  476 aaatatcat---aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| ||   ||||||||||||||||||  |||||| ||||||||||||    
T  40916839 aaatatgataaaaaaaagactctaaaaatagcaaatgactgactgtcatca 40916889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 442 - 500
Target Start/End: Original strand, 22937974 - 22938032
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaa 500  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22937974 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaa 22938032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 21332643 - 21332708
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  21332643 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 21332708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 30065813 - 30065756
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  30065813 ttcttccttgtgtaacaaaccacccaaattagggtttccataaccgtgtcacgttttt 30065756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 43490874 - 43490793
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  43490874 ttttcttgctgcttaagcttgtttgtgaactcaaaaatatcataaaaagactctaaaaatgtgaaatgacagactgtcatca 43490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 7271178 - 7271110
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7271178 tgaagagaaatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 7271110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 182
Target Start/End: Complemental strand, 7271387 - 7271279
Alignment:
Q  74 aatgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaa 173  Q
    ||||||||  |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||  ||    
T  7271387 aatgatagacttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaaataa 7271288  T
Q  174 atatttagg 182  Q
    |||||||||    
T  7271287 atatttagg 7271279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 442 - 525
Target Start/End: Original strand, 21827959 - 21828043
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatcagg 525  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||   ||||| ||||||||||||||    
T  21827959 ttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatcagg 21828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 30066471 - 30066403
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30066471 tgaaaagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 30066403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 33552283 - 33552215
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  33552283 tgaagagtgatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 33552215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 4099299 - 4099397
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||||| |||||||||||    
T  4099299 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatatcaatttagcaataaagtaaatatttagg 4099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 21336660 - 21336742
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||| |||||||||||| |||||||||| || |||||||||||||||||| | ||||| ||||||||||||    
T  21336660 ttttcttgttgcttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatca 21336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 4100173 - 4100230
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  4100173 ttcttccttgtgtaacaaaccaccaaaattagggtttgcataatcgtgtcacgttttt 4100230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 523
Target Start/End: Original strand, 14016967 - 14017036
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||  |||||| ||||||||||||    
T  14016967 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 14017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 21332448 - 21332545
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttag 181  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||||| ||||||||||    
T  21332448 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttag 21332545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 22131389 - 22131326
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  22131389 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 22131326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 28787092 - 28787191
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||   || ||| ||||||||||| ||||||| |||||||||||    
T  28787092 tttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggaccgtgttagtctcaatttagcaataaagtaaatatttagg 28787191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 30066655 - 30066572
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||| |||||| ||||| ||||  |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  30066655 taaaaatgcatcgaagtaataaaataggttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 30066572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 12058455 - 12058520
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  12058455 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 12058520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 12088117 - 12088052
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  12088117 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 12088052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 17664711 - 17664646
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattct 347  Q
    ||||||||||| |||||| |||| |||| ||||||||| |||||||||||||||||||| ||||||    
T  17664711 aagagagatgagatcaggtcttttgaattatctatgttcccctaattggtatactgcacctattct 17664646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 18952852 - 18952787
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| ||||   ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18952852 agagagatgagatcaaatctttcaaatcatctatgttcccctaattggtatactgcacatattctt 18952787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 20055933 - 20055868
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||| |||| || ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20055933 agagatatgagatgaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 20055868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 26752664 - 26752721
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcac 340  Q
    |||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||    
T  26752664 agagagatgagatcaggtctttcgaatcatttatgttcccctaattggtatactgcac 26752721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 26895567 - 26895632
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  26895567 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatgttgcacctattctt 26895632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 26907418 - 26907483
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  26907418 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26907483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 34132946 - 34133011
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  34132946 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 34133011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 34143177 - 34143242
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  34143177 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 34143242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 4099477 - 4099545
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| |  ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  4099477 tgaagaaagatgagactaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 4099545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 42063080 - 42063016
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  42063080 gagagatgagactaggtcttttgaatcatctatgtttccctaattggtatactgcacctattctt 42063016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 2837526 - 2837641
Alignment:
Q  384 taatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagtt--------ttttcttgctgcttaatcttgcttgtgaattc 473  Q
    |||||||| ||||||||||||||||||||||| ||| ||  || ||||| ||||||||||        |||| ||||||||||| |||||||||||| ||    
T  2837526 taatcgtgacacgtttttcagtaatcgtgacatgattccctttcttcagtttcttcagtttttcttgcttttattgctgcttaagcttgcttgtgaactc 2837625  T
Q  474 aaaaatatcataaaaa 489  Q
     |||||||||||||||    
T  2837626 caaaatatcataaaaa 2837641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 14016101 - 14016164
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||| ||||| |||||    
T  14016101 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatagtgcacctattc 14016164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 451
Target Start/End: Complemental strand, 33551482 - 33551415
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgat-gcctttttcagcttcttcagttttttcttgct 451  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||  ||||| ||||||||||||||    
T  33551482 aatcgtgacacgtttttcagtaatcgtgacacgatcccctttttcactttctttagttttttcttgct 33551415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 33551587 - 33551536
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  33551587 cttgtgtaacaaaccacccaaattagggttttcataatcgtgtcactttttt 33551536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 33552465 - 33552382
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||  |||| || |||||||||||    
T  33552465 taaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttaacaatagagtaaatatttagg 33552382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 11959140 - 11959206
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||||  | ||| ||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  11959140 aagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataccgcacctattctt 11959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 454 - 524
Target Start/End: Complemental strand, 17747686 - 17747616
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||| ||| ||| |||| |||||| ||||||||||||||||||||||||  |||||| |||||||||||||    
T  17747686 ttaagctttcttatgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatcag 17747616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 21335482 - 21335564
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttag 181  Q
    |||||||| |||||| ||||| ||||| || ||||||||||||  ||| ||||| ||||||||| ||||||| ||||||||||    
T  21335482 taaaaatgtatcgaagtaataaaataagtttgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttag 21335564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 41306490 - 41306552
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||| | ||| || ||||||||||||||||||| |||||||||||||||||||| ||||    
T  41306490 agagagataagatcgggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 41306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 23044301 - 23044236
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||| |||||||||||||| |||||||||||||||||||| |||||||    
T  23044301 agagagatgagtttaggtcttttgaatcatctatgttcccctaattggtatactgcacctattctt 23044236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 31863874 - 31863809
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |  ||| ||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  31863874 agagagatgagactaggtctttcgaatcatctatgttcccctaattgatatactgcacctattctt 31863809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 37215203 - 37215139
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||||||||| ||||| |||||||    
T  37215203 agagagatgaaattaggtctttcgaatcatctaag-ttccctaattggtatattgcacctattctt 37215139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 21335662 - 21335726
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| | || | ||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  21335662 gagagatgagaccaagtctttcgaatcatctatgttcccctaatttgtatactgcacctattctt 21335726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 39192492 - 39192424
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||  ||||||||||||| ||||| ||||||||| |||| ||||| |||||||    
T  39192492 tgaagagagatgagatcagatctttcgaatcatcaatgttcccctaattgatataatgcacgtattctt 39192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 43491915 - 43491859
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgca 339  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||| |||||| ||||    
T  43491915 agagagatgagatcaggtctttcgaatcatctatgttcccctaatcggtatattgca 43491859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 7270482 - 7270431
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  7270482 cttgtgtaacaaaccacctaaattagagtttctataatcgtgtcacgttttt 7270431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 18031963 - 18031912
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||  |||||| |||||||| |||||||||||||||||    
T  18031963 cttgtgtaacaaaccactgaaattagggtttccacaatcgtgtcacgttttt 18031912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 39192674 - 39192591
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||| |||||| ||||| || || ||||||| ||||| |  ||||||||||||||||||| ||||||  |||||||||||    
T  39192674 taaaaatgcatcgaattaataaaagaagttcgtattcacgaagactgtattaatctcaatttagcaataaattaaatatttagg 39192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 7625262 - 7625200
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||| |||||| ||||| ||||||| ||||| |||||||||||||||| ||| ||||    
T  7625262 agagagatgagatcaggtctttcaaatcatcgatgttcccctaattggtatactacacctatt 7625200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 22936901 - 22936965
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  22936901 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 22936965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 34831926 - 34831858
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| || ||| |||||||||| |||  ||| |||||||||||||| ||||| |||||||    
T  34831926 tgaagagagatgagattaggtctttcgaatcttctgagttcccctaattggtataatgcacctattctt 34831858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 41876577 - 41876625
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  41876577 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 41876625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 2453612 - 2453538
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||||| ||||| || ||||||||||||  ||| |||||||||| |||| |||||||  ||||||||||    
T  2453612 atcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttagg 2453538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 3195411 - 3195349
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  3195411 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 3195349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 17664019 - 17663965
Alignment:
Q  347 ttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||||||| |||||    ||| |||||||||||||    
T  17664019 ttccttgtgtaacaaaccacccaaattagggtttatgaaattgtgtcacgttttt 17663965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 30764555 - 30764493
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  30764555 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 30764493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 34832059 - 34832025
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  34832059 ttaatctcaatttagaaataaagtaaatatttagg 34832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 40583409 - 40583343
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||||  | ||| |||||||||| || |||||  ||||||||||||||||||| |||||||    
T  40583409 aagagagatgagtttaggtctttcgaatcctcgatgttctcctaattggtatactgcacctattctt 40583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 7625453 - 7625368
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataat-ttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||| ||| |||||||| |||||| || || |||||  |||||||||||||||  ||| ||||||||||||||| |||||    
T  7625453 ttttagcaagtgtactaaaaatgcatcgaagtagtaaaataaagttcgtatccacgaggactgtgttaatctcaatttagcaataa 7625368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 14375759 - 14375820
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| ||||    
T  14375759 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctatt 14375820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 523
Target Start/End: Complemental strand, 25329505 - 25329456
Alignment:
Q  474 aaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||| ||||||||||||   ||||| ||||||||||||    
T  25329505 aaaaatatcataaaaaaactctaaaaatagcgaatgactgactgtcatca 25329456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 26292930 - 26292885
Alignment:
Q  303 ttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||| | | |||||||||||||||||| |||||||    
T  26292930 ttcgaatcatctatgctcctctaattggtatactgcacctattctt 26292885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 28442105 - 28442181
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| || |||||||||| |||| ||| ||||||||| | ||||| ||||||||||||    
T  28442105 ttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 28442181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 17748577 - 17748537
Alignment:
Q  305 cgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||||||| ||||||||||||||| |||| ||||    
T  17748577 cgaatcatctatgttcccctaattggtataccgcacctatt 17748537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 18240150 - 18240202
Alignment:
Q  349 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||| ||||||||  ||||||||||| |||||||| ||||||||||| |||||    
T  18240150 ccttatgtaacaagtcacccaaattagggtttccagaatcgtgtcacattttt 18240202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 22936763 - 22936811
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  22936763 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 22936811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 4694871 - 4694723
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagttttttctt---------gctgcttaatcttgcttgtgaattca 474  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||| |||    
T  4694871 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttttcagcttcttcagttttttcttacttttcttgctgcttaatcttgcttgtgaactca 4694772  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||| ||||||||||||||||| |||||| ||||| ||||||    
T  4694771 aaaatatcatagaaagactctaaaaataacaaatgactgactttcatca 4694723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 45287989 - 45288138
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttt---------tcttgctgcttaatcttgcttgtgaattc 473  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||| |||||||| ||||         ||||||||||||| |||||||||||| ||    
T  45287989 aatcgtgacacgtttttcagtaattgtgacacgatgccttcttttcagtttcttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactc 45288088  T
Q  474 aaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  45288089 aaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 385 - 524
Target Start/End: Original strand, 9865494 - 9865643
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 474  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||  |||||||||||||        |||||||||||||||||||||||||| |||    
T  9865494 aatcgtgtcacgtttttcaataatcgtgacacgatcctcttttttcattttcttcagtttttcttgcttttcttgctgcttaatcttgcttgtgaactca 9865593  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    ||||||||||||||||||||||||||||   ||||| |||||||||||||    
T  9865594 aaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatcag 9865643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 441 - 523
Target Start/End: Original strand, 45291392 - 45291474
Alignment:
Q  441 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  45291392 tttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 4596843 - 4596924
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  4596843 ttttcttgttgcttaatctttcttgtgagctcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 4596924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 20081559 - 20081640
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| | ||||| ||||||||||||    
T  20081559 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaacactctaaaaatagtgaatgactgactgtcatca 20081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 9080525 - 9080376
Alignment:
Q  385 aatcgtgtcacgtttttcagt-aatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattc 473  Q
    ||||||| ||||||||||||| ||| |||||||||||||  ||||| || |||||||||||||        ||||||||||||| |||||||||||| ||    
T  9080525 aatcgtgacacgtttttcagttaatagtgacacgatgccctttttttagtttcttcagtttttcttggttttcttgctgcttaagcttgcttgtgaactc 9080426  T
Q  474 aaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||  ||||||||||||||||||||||  ||||| | ||||||||||    
T  9080425 aaaaattacataaaaagactctaaaaataacgaatgactaactgtcatca 9080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 17730054 - 17729973
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||| | || || ||||||||||||    
T  17730054 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaggactctaaaaatagtgaaagactgactgtcatca 17729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 23224873 - 23224938
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23224873 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 23224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 4595974 - 4596042
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  4595974 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatacttcacatattctt 4596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 17730963 - 17730895
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  17730963 tgaagagagatgagatcatgtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 17730895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 20594412 - 20594344
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20594412 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacgtattctt 20594344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 26557648 - 26557580
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  26557648 tgaagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 26557580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 442 - 524
Target Start/End: Complemental strand, 8276093 - 8276011
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||   |||||  ||||||||||||    
T  8276093 ttttcttgctgcttgagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatggaatgacagactgtcatcag 8276011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 10345522 - 10345424
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  10345522 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 10345424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 35961446 - 35961348
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  35961446 ttttagaaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 35961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 37415391 - 37415456
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37415391 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37415456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 45287037 - 45287102
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  45287037 agagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 45287102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 4542946 - 4542878
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||| |||||||    
T  4542946 tgaagagagatgagatcaggtcttccgaatcatctatgttcccctaattggtatactgcacctattctt 4542878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 4547018 - 4546950
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  4547018 tgaagagggatgagatcaggtctttcgaatcatctatgtttccctaattgatatactgcacctattctt 4546950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 11919830 - 11919898
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  11919830 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactacacctattctt 11919898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 14683411 - 14683477
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  14683411 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 14683477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 48645813 - 48645715
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||||| |||||||||||    
T  48645813 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagg 48645715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 4694982 - 4694925
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  4694982 ttcttccttgtgtaagaaaccacccaaattagggtttccataattgtgtcacgttttt 4694925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 9865383 - 9865440
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  9865383 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacattttt 9865440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 45290448 - 45290513
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  45290448 agagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 45290513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 8277135 - 8277067
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||| |||||||||| |||||||||||||| ||||| |||||||    
T  8277135 tgaagagagatgagatcaggtctttcgaagcatctatgttcccctaattggtataatgcacctattctt 8277067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 442 - 502
Target Start/End: Complemental strand, 10344697 - 10344637
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaata 502  Q
    |||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||||    
T  10344697 ttttcttgctgcttaagcttgcttgtgaactcaaaaatttcataagaagactctaaaaata 10344637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 4695836 - 4695729
Alignment:
Q  75 atgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaa 174  Q
    |||||||  |||||| ||| ||| |||||||| |||||| ||||| ||||| || ||||||||||||  ||| ||||||| ||||||| ||||||| |||    
T  4695836 atgatagacttttagcaagtgtattaaaaatgcatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctaaatttagcaataaagtaaa 4695737  T
Q  175 tatttagg 182  Q
    ||||||||    
T  4695736 tatttagg 4695729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 9132746 - 9132793
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9132746 ctttcgaatcatctatgttcccctaattggtatactgcacatattctt 9132793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 9864526 - 9864609
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||| ||||||  |||| ||||| |||||||||| ||||  ||| ||||||||||||||||||||||| |||||||||||    
T  9864526 taaaaatgcatcgaagcaataaaataagttcgtatccatgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 9864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 17730268 - 17730217
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  17730268 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 17730217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 9273779 - 9273833
Alignment:
Q  347 ttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  9273779 ttccttgtgtaacaaaccactcaaattagggtttccgtaatcgtgtcacgttttt 9273833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 9864691 - 9864757
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||| ||| |||||    
T  9864691 tgaagagagatgagatcaggtctttcaaatcatctatgtatccctaattggtatactacacctattc 9864757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 16165895 - 16165833
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| ||||    
T  16165895 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 16165833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 26557845 - 26557747
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||| | |||||| ||||| ||||| ||| |||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  26557845 ttttagcaagtgtactaaaaacgtatcgaagtaataaaataagttcatatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 26557747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 10345341 - 10345276
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10345341 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10345276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 26136096 - 26136161
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  26136096 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26136161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 26144476 - 26144541
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  26144476 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26144541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 37166115 - 37166180
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | ||| |||||||||||| |||||| |||||||||||||||||||| |||||||    
T  37166115 agagagatgaatttaggtctttcgaatcatttatgttcccctaattggtatactgcacctattctt 37166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 4695630 - 4695562
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||| |||||||| | |||| |||||||||||||||| || |||||||||||||||||||| |||||||    
T  4695630 tgaaaagagatgagaccaggtctttcgaatcatctatattcccctaattggtatactgcacctattctt 4695562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 9271430 - 9271498
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| | ||||  ||| |||||||||||||| |||||||||||||||||||| |||||||    
T  9271430 tgaagagagatgagaacaggtatttagaatcatctatgttcccctaattggtatactgcacctattctt 9271498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 20080704 - 20080752
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattcttc 349  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  20080704 ctttcgaatcatctatgttcccctaattggtatactgcacctattcttc 20080752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 2441246 - 2441309
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| |||||  ||||||||||||||||||| |||||    
T  2441246 agagagatgagatcaggtctttcgaatcatcgatgttctcctaattggtatactgcacctattc 2441309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 9080630 - 9080579
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  9080630 cttgtgtaacaaaccacacaaattagggtttccataattgtgtcacgttttt 9080579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 22611495 - 22611599
Alignment:
Q  76 tgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaat 175  Q
    |||||| ||||||||||| ||| |||||||| |||||| ||||| ||||| ||||||  |||||||  | | ||||||||||||||| |||| || ||||    
T  22611495 tgatagatttttagtaagtgtactaaaaatgcatcgaagtaataaaataagttcgta--cacgaggactttgttaatctcaatttagcaatatagtaaat 22611592  T
Q  176 atttagg 182  Q
    |||||||    
T  22611593 atttagg 22611599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 4595777 - 4595875
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||  ||| ||| |||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  4595777 ttttagcaagtgtactaaaaatgcatcgaagtaataaaatatgttcatattcacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 4595875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 17731166 - 17731068
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| ||||||||||| |||  ||| ||||||||| ||||| |||||||  ||||||||||    
T  17731166 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacaaggactgtgttaatctcagtttagcaataaagtgaatatttagg 17731068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 9273953 - 9274034
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||| |||||||||||| || ||||||||||||||||||| | |||||   ||||||  |||||||||||    
T  9273953 ttttcttggtgcttaagcttgcttgtgaactccaaaatatcataaaaagactttgaaaatgtgaaatgacggactgtcatca 9274034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 35961221 - 35961172
Alignment:
Q  299 gactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  35961221 gactttcgaatcatctatgttcctctaattggtatactgcacctattctt 35961172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 11919682 - 11919730
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  11919682 ccacgaggactgtattaatctcaatttagaaataaagtaaatatttagg 11919730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 3067963 - 3068010
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  3067963 ctttcgaatcatctatgttcccctaattgttatactgcacctattctt 3068010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 6603601 - 6603542
Alignment:
Q  287 agatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||| |||| | ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  6603601 agatgagatcaagtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 6603542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 13449744 - 13449807
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| | |||| ||||||||||||| ||| | |||||||||||||||||||| |||||    
T  13449744 agagagatgagaacaggtctttcgaatcatcgatggtcccctaattggtatactgcacctattc 13449807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 13842786 - 13842723
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| || || || ||||||||||||||||| |||||    
T  13842786 agagagatgagatcaggtctttcgaatcatcgatattcccgtaattggtatactgcacctattc 13842723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 625
Target Start/End: Complemental strand, 22620946 - 22620863
Alignment:
Q  542 aatgtaatgaatcaagatagttccattataataaaataggccatgttatattagatga--agtcgtgtttttagaaggatctagag 625  Q
    |||||||||||| ||||||| ||||||| |||| ||||| ||  ||||||||||| ||  |||| |||||||||||||||||||||    
T  22620946 aatgtaatgaattaagataggtccattagaatataatagccc--gttatattagaggatgagtcatgtttttagaaggatctagag 22620863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 48645602 - 48645555
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  48645602 ctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 48645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 11397828 - 11397913
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||| || |||||||||||||||  ||| ||||||||||||||| |||||    
T  11397828 ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataa 11397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 8277283 - 8277235
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  8277283 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 8277235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 10469272 - 10469225
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| |||||||| ||| ||||||| |||||||    
T  10469272 ctttcgaatcatctatgttcccctaattagtacactgcacctattctt 10469225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 11398017 - 11398080
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| || ||| ||||||| ||||| ||||| ||||||||||||||||| || |||||    
T  11398017 agagagatgagattaggtctttcgattcatcgatgttcccctaattggtatactgtacctattc 11398080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 5242118 - 5242180
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||| |||||| |||||||||| |||  ||| || ||||||||||||||||| ||||    
T  5242118 agagagatgagatcaggtctttcgaatcttctgagttcccttaattggtatactgcacctatt 5242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 8398149 - 8398087
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  8398149 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 8398087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 11825155 - 11825217
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  11825155 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 11825217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 26153483 - 26153421
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  26153483 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 26153421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 4542150 - 4542074
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaa-gactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| |||||| |||||| |||| ||| ||||||||| | ||||| ||||||||||||    
T  4542150 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 4542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 10431462 - 10431386
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaa-gactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| |||||| |||||| |||| ||| ||||||||| | ||||| ||||||||||||    
T  10431462 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 10431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 4543093 - 4543045
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  4543093 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 4543045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 22232426 - 22232486
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||    
T  22232426 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataa 22232486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 22254313 - 22254253
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||    
T  22254313 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataa 22254253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 21019228 - 21019367
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||| |||| ||| ||| |||||||||||    
T  21019228 aatcgtgacacgtttttcagtaatcgtgacacgatgccctttttttagtttcttcagttttttcttgctgcttaagcttggttgcgaactcaaaaatatc 21019327  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    || |||||||||||||||||   ||||| ||||||||||||    
T  21019328 at-aaaagactctaaaaatagcgaatgactgactgtcatca 21019367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 2404870 - 2404722
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagtttt---------ttcttgctgcttaatcttgcttgtgaattca 474  Q
    |||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||| |||    
T  2404870 aatcatgtcacgtttttcagaaattgtgacacgatgccttttttcagcttcttcagttttatcttgcttttcttgctgcttaatcttgcttgtgaactca 2404771  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||| ||||||||||||||||||||   ||||| ||||||||||||    
T  2404770 aaaatattataaaaagactctaaaaatagcgaatgactgactgtcatca 2404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 2405673 - 2405605
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2405673 tgaagagagatgagatcaggtctttcgaatcatctatgttttcctaattggtatactgcacctattctt 2405605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 21108245 - 21108393
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 474  Q
    ||||||| ||| ||||||| ||||||||||||||| ||  |||||||| |||||||||||||        |||||| |||||||||||||| ||| ||||    
T  21108245 aatcgtgacacatttttcaataatcgtgacacgatccccttttttcagtttcttcagtttttcttgcttttcttgcagcttaatcttgcttttgagttca 21108344  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||| ||||||||||||| |   ||||| ||||||||||||    
T  21108345 aaaatatcataagaagactctaaaaagagcgaatgactgactgtcatca 21108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 45941580 - 45941512
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  45941580 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 45941512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 2405871 - 2405772
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  2405871 tttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 2405772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 2794388 - 2794323
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  2794388 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 2794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 41058953 - 41059010
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  41058953 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 41059010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 21107251 - 21107319
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  21107251 tgaagagagatgagatcaggtctttcgaatcatctatgttcacctaattggtatactgcacctattctt 21107319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 21111118 - 21111186
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  21111118 tgaagagagatgagatcaggtctttcgaatcatctatgttctcctaattggtatactgcacctattctt 21111186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 21114458 - 21114526
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  21114458 tgaagagagatgagatcaggtctttcgaatcatctatgttctcctaattggtatactgcacctattctt 21114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 42021871 - 42021721
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttttc----------ttgctgcttaatcttgcttgtgaatt 472  Q
    ||||||| ||| |||||||||||||||||||||||||| |  |||||| ||||||| ||||||           ||||||||||| |||||||||||| |    
T  42021871 aatcgtgacacatttttcagtaatcgtgacacgatgccctcttttcagtttcttcaatttttttcttgcttttattgctgcttaaacttgcttgtgaact 42021772  T
Q  473 caaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||  ||||| ||||||||||||||||||||   ||||||||||||||||||    
T  42021771 cagtaatattataaaaagactctaaaaatagcgaatgattgactgtcatca 42021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 524
Target Start/End: Original strand, 41059152 - 41059235
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||   ||||| |||||||||||||    
T  41059152 ttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatcag 41059235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 673033 - 673098
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  673033 agagagatgagatcatgtatttcgaatcatctatgtttccctaattggtatactgcacctattctt 673098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 20399014 - 20398949
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  20399014 agagagatgagatcaggtctttcgagtcatctatgttcccctaattggtatactgcacctattctt 20398949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 28111217 - 28111152
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  28111217 agagagatgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctattctt 28111152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 21018427 - 21018495
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||| || |||||||    
T  21018427 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaatttgtatactgaacctattctt 21018495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 905666 - 905713
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  905666 ctttcgaatcatctatgtttccctaattggtatactgcacttattctt 905713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 21108144 - 21108191
Alignment:
Q  354 tgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21108144 tgtaacaaaccacccaaattagggtttccataatcgtgtcacgttttt 21108191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 27536494 - 27536557
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  27536494 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 27536557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 31204999 - 31204936
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  31204999 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 31204936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 37183826 - 37183889
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  37183826 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 37183889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 21110921 - 21111019
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||  |||||||||||||||  ||| ||| ||||||||||| ||||||| |||||||||||    
T  21110921 ttttagcaagtgtactaaaaatgcatcgaagtaataaaatatgttcgtatccacgaggactgtgttactctcaatttagcaataaagtaaatatttagg 21111019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 454 - 524
Target Start/End: Original strand, 45961638 - 45961708
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||| |||||||||||| |||||| |||||||| |||||||||||||||  |||||| |||||||||||||    
T  45961638 ttaagcttgcttgtgaactcaaaattatcataacaagactctaaaaatagcaaatgactgactgtcatcag 45961708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 2404981 - 2404924
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  2404981 ttctgccttgtgtaacaaacaaccgaaattagggtttccataatcgtgtcacgttttt 2404924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 3796789 - 3796854
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  3796789 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 3796854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 49498460 - 49498525
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  49498460 agagagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctattctt 49498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 454 - 522
Target Start/End: Original strand, 27537144 - 27537212
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatc 522  Q
    |||| |||||||||||| |||||| ||||||||||||||| ||||||||  |||||| |||||||||||    
T  27537144 ttaagcttgcttgtgaactcaaaattatcataaaaagactataaaaatagcaaatgactgactgtcatc 27537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 45960705 - 45960769
Alignment:
Q  281 gaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  45960705 gaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtataatgcacctatt 45960769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 1950436 - 1950483
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  1950436 ctttcgaatcatctatgttcccctaattggtatactgcacctattctt 1950483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 23021888 - 23021951
Alignment:
Q  285 agagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||| || ||| ||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  23021888 agagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctattctt 23021951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 29644227 - 29644286
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||| |||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||    
T  29644227 tttttttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctataaat 29644286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 41058096 - 41058163
Alignment:
Q  115 taatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  41058096 taataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 41058163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 42022974 - 42022891
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||| || ||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||  ||||||| |||||||||||    
T  42022974 taaaaatgcattgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttaacaataaagtaaatatttagg 42022891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 21018245 - 21018327
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttag 181  Q
    |||||||| |||||| ||||| ||||| |||||||||||||||  ||| |||| |||||||||  ||||||| ||||||||||    
T  21018245 taaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaacctcaatttaacaataaagtaaatatttag 21018327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 29642994 - 29643080
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||| ||| |||||||| || ||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| |||||||    
T  29642994 ttttagcaagtgtactaaaaatgcattgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaag 29643080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 49852901 - 49852999
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||| || || ||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  49852901 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgcattcatgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 49852999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 41058262 - 41058330
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || || ||| ||||||||||||||||||| | ||||||||||| |||||| |||||||    
T  41058262 tgaagagagaagagattaggtctttcgaatcatctatgttcctctaattggtatgctgcacctattctt 41058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 21019122 - 21019173
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||| ||||||||| || |||||||||||||||||||| |||||    
T  21019122 cttgtgtaacaacccacccaaactagggtttccataatcgtgtcacattttt 21019173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 45941776 - 45941679
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| || ||| ||||  |||| |||  ||| ||||||||||||||||||||||| |||||||||||    
T  45941776 ttttagcaagtgtactaaaaatgtatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttagg 45941679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 6070919 - 6070979
Alignment:
Q  286 gagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    ||||||| ||||||  |||||||||||| ||||| |||||||||||||| ||||| |||||    
T  6070919 gagatgagatcaggtttttcgaatcatcgatgttcccctaattggtatattgcacctattc 6070979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 454 - 523
Target Start/End: Complemental strand, 2793368 - 2793299
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| |||||||||||| |||||| |||||| |||||||||||||||||| | || || ||||||||||||    
T  2793368 ttaaacttgcttgtgaactcaaaa-tatcattaaaaagactctaaaaatagtgaacgactgactgtcatca 2793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 6070795 - 6070829
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  6070795 ttaatctcaatttagaaataaagtaaatatttagg 6070829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 13430920 - 13430977
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcac 340  Q
    |||||||||| |||||| |||||||||| |||  ||| |||||||||||| |||||||    
T  13430920 agagagatgagatcagggctttcgaatcctctgagttcccctaattggtacactgcac 13430977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 29643184 - 29643249
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||| ||||| |||||| | ||||||||||| |||||||    
T  29643184 agagagatgagtttaggtctttcgaatcatcgatgttcccctaactagtatactgcacctattctt 29643249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 49147150 - 49147113
Alignment:
Q  486 aaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  49147150 aaaagactctaaaaatagtgaatgattgactgtcatca 49147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 41059064 - 41059096
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacg 417  Q
    ||||||| |||||||||||||||||||||||||    
T  41059064 aatcgtgacacgtttttcagtaatcgtgacacg 41059096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 116)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 385 - 524
Target Start/End: Complemental strand, 19820089 - 19819949
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaa-tatc 482  Q
    ||||||| ||||||||||||||||||||||||||| || ||||| || ||||||||||||| |||||| |||||||||||||||||| ||||||| ||||    
T  19820089 aatcgtgacacgtttttcagtaatcgtgacacgatccccttttttagtttcttcagttttt-cttgctacttaatcttgcttgtgaactcaaaaaatatc 19819991  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    ||||||||||| ||||||||   ||||| |||||||||||||    
T  19819990 ataaaaagactttaaaaatagcgaatgactgactgtcatcag 19819949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 524
Target Start/End: Original strand, 27677817 - 27677967
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagtttttt--------cttgctgcttaatcttgcttgtgaattca 474  Q
    ||||||||||||||||||||||||||||||||| | ||  |||||||| ||||||||||||||        ||||||||||||||||| ||||||| |||    
T  27677817 aatcgtgtcacgtttttcagtaatcgtgacacggtccccttttttcagtttcttcagttttttttgcttttcttgctgcttaatcttgattgtgaactca 27677916  T
Q  475 aaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||||||||| |||||||||||||||||| | ||| | |||||||||||||    
T  27677917 aaaatatcataaaaaagactctaaaaatagtgaataactgactgtcatcag 27677967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 441 - 524
Target Start/End: Original strand, 53010376 - 53010459
Alignment:
Q  441 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  53010376 tttttcttgctgcttaatcttacttgtgaactcaaaaatatcataaaaagactctaaaaataatgaatgactgactatcatcag 53010459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 27691885 - 27692025
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    |||||||||||||||||||||||||||||||| || ||  |||||||| || |||    |||||||||||||||||||||||||||||||||||||||||    
T  27691885 aatcgtgtcacgtttttcagtaatcgtgacacaatccccttttttcagttt-ttcttgcttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 27691983  T
Q  483 at-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
     | |||||||||||||||||| | ||||| | | ||||||||    
T  27691984 gtaaaaaagactctaaaaatagtgaatgactaattgtcatca 27692025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 15430616 - 15430766
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc---tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattc 473  Q
    |||||||||||||||||||||||| |||||||||| ||   |||||||| |||| ||||||||        ||||||||||||| |||||||||||| ||    
T  15430616 aatcgtgtcacgtttttcagtaattgtgacacgatccccgttttttcagtttctccagtttttcttgcttttcttgctgcttaagcttgcttgtgaactc 15430715  T
Q  474 aaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||| ||||||||||| |||||||  ||||| ||||||||||||    
T  15430716 aaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 15437230 - 15437380
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc---tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattc 473  Q
    |||||||||||||||||||||||| |||||||||| ||   |||||||| |||| ||||||||        ||||||||||||| |||||||||||| ||    
T  15437230 aatcgtgtcacgtttttcagtaattgtgacacgatccccgttttttcagtttctccagtttttcttgcttttcttgctgcttaagcttgcttgtgaactc 15437329  T
Q  474 aaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||| ||||||||||| |||||||  ||||| ||||||||||||    
T  15437330 aaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15437380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 44164142 - 44164001
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-----tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaat 479  Q
    ||||||||||||||||||||||||||||||||||| ||     |||||   ||||||     ||||||||||||||||||||||||||||| ||||||||    
T  44164142 aatcgtgtcacgtttttcagtaatcgtgacacgatccccccttttttttcccttcttgc---ttttcttgctgcttaatcttgcttgtgaactcaaaaat 44164046  T
Q  480 atcata-aaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||||||| |||||||| | ||||| ||||||||||||    
T  44164045 atcataaaaaagactttaaaaatagtgaatgactgactgtcatca 44164001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 19826850 - 19826701
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 474  Q
    ||||||| ||||||||||||||||||||||||||| ||  |||||||| |||||||||||||        ||||| ||||||||||| |||||||| |||    
T  19826850 aatcgtgacacgtttttcagtaatcgtgacacgatccccttttttcagtttcttcagtttttcttgcttttcttgttgcttaatcttacttgtgaactca 19826751  T
Q  475 aaaa-tatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| | ||||||||||||||||||||||   ||||| ||||||||||||    
T  19826750 aaaaatttcataaaaagactctaaaaatagcgaatgactgactgtcatca 19826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 24044976 - 24045057
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  24044976 ttttcttgctgcttaatcttgtttgtgaactcaaaaatatcaaaaaaagactctaaaaataacgaatgactgactgtcatca 24045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 52007292 - 52007431
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctttt--tcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    ||||||| ||||||||| ||| ||||||||| ||| || |||  |||| |||||| | ||||||||||||||||| ||||||| |||| |||| ||||||    
T  52007292 aatcgtgacacgttttttagttatcgtgacatgattccctttcttcagtttcttc-gatttttcttgctgcttaagcttgcttttgaactcaacaatatc 52007390  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||   ||||| ||||||||||||    
T  52007391 ataaaaagactctaaaaatagcgaatgactgactgtcatca 52007431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 3718417 - 3718336
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||| | ||||| ||||||||||||    
T  3718417 ttttcttgttgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaaatagtgaatgagtgactgtcatca 3718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 15445325 - 15445393
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  15445325 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 15445393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 19827577 - 19827509
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  19827577 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtataatgcacatattctt 19827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 442 - 502
Target Start/End: Complemental strand, 40794273 - 40794213
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaata 502  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  40794273 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaata 40794213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 14571107 - 14571048
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  14571107 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 14571048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 19821063 - 19820965
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  19821063 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 19820965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 27014423 - 27014357
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  27014423 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 27014357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 393 - 523
Target Start/End: Complemental strand, 35509320 - 35509201
Alignment:
Q  393 cacgtttttcagtaatcgtgacacgatgcctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagac 492  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||| |||| |||||||||||||||||||| |||||||||||||| |||||     
T  35509320 cacgtttttcagtaatcgtgacacgatccc--------cttcttcagttttt-cttgttgcttaatcttgcttgtgaactcaaaaatatcatataaaga- 35509231  T
Q  493 tctaaaaataataaatgattgactgtcatca 523  Q
     ||||||||||  ||||| ||||||| ||||    
T  35509230 -ctaaaaataacgaatgactgactgttatca 35509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 81 - 182
Target Start/End: Complemental strand, 3720712 - 3720611
Alignment:
Q  81 ggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatattta 180  Q
    ||||||||| ||  ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||    
T  3720712 ggtttttagcaaatgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatattta 3720613  T
Q  181 gg 182  Q
    ||    
T  3720612 gg 3720611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 3797771 - 3797836
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  3797771 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 3797836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 5670736 - 5670671
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5670736 agagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 5670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 5673054 - 5672989
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5673054 agagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 5672989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 12782187 - 12782106
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||| |||||||||||||   ||||| ||||||||||||    
T  12782187 ttttcttgctgcttaagcttgcttgtaaactcaaaaatatcataaaatgactctaaaaatagcgaatgactgactgtcatca 12782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 19859485 - 19859550
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  19859485 agagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacatattctt 19859550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 27677706 - 27677763
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  27677706 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 27677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 34017744 - 34017809
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  34017744 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 34017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 39501807 - 39501742
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  39501807 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 39501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 40616771 - 40616836
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  40616771 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 40616836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 48637664 - 48637607
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcac 340  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  48637664 agagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcac 48637607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 52530898 - 52530963
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  52530898 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 52530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 12783066 - 12782998
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||| |||||||    
T  12783066 tgaagagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatactgcacctattctt 12782998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 19820889 - 19820821
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||||||| |||||||    
T  19820889 tgaagagagatgagatcaggtctttcgaatcatctttgttcccctaattggtatactgcacctattctt 19820821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 442 - 502
Target Start/End: Complemental strand, 21419060 - 21419000
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaata 502  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  21419060 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaata 21419000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 38283449 - 38283517
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  38283449 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 38283517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 40795164 - 40795096
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  40795164 tgaagagagataagatcaggtctttcgaatcatctatgtttccctaattggtatactacacctattctt 40795096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 40903043 - 40903111
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||||| |||||||    
T  40903043 tgaagagagatgagatcaggtctttagaatcatctatgttcccctaattggtatactgcacctattctt 40903111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 52006491 - 52006559
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  52006491 tgaagagagatgagaccaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 52006559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 12786471 - 12786373
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| |||||||  ||||||||||    
T  12786471 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtgaatatttagg 12786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 19827770 - 19827672
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| ||||||||  ||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  19827770 ttttagcaagtgtactaaaaatgtctcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 19827672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 524
Target Start/End: Complemental strand, 29324048 - 29323978
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||  |||||| |||||||||||||    
T  29324048 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatcag 29323978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 52006294 - 52006392
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| ||||||||||||||| ||||| ||||| || ||||||||||||  ||| |||||||||||||||  |||||| |||||||||||    
T  52006294 ttttagcaagtgtactaaaaatgaatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcgataaagtaaatatttagg 52006392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 56199012 - 56198950
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||    
T  56199012 agagagatgaaatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 56198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 11195834 - 11195769
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11195834 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 11195769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 19864480 - 19864545
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||| | |||||||||||||||||||| |||||||    
T  19864480 agagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacctattctt 19864545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 24044792 - 24044849
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  24044792 ttcttccttgtgtaacaaactaccaaaattagggtttccataatcgtgtcacgttttt 24044849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 24150831 - 24150766
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| |||||||||||||| |||| |||||||||||||||||||| |||||||    
T  24150831 agagagatgagatcaggtctttcgaatcatctgtgttcccctaattggtatactgcacctattctt 24150766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 27691774 - 27691831
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  27691774 ttcttccttgtgtaacaaaccaccaaaattagggttttcataatcgtgtcacgttttt 27691831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 37102980 - 37103077
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatattta 180  Q
    ||||||| ||| ||| |||||||| ||| || ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||    
T  37102980 tttttagcaagtgtactaaaaatgcatcaaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatattta 37103077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 39498468 - 39498403
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  39498468 agagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatactgcacctattctt 39498403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 523
Target Start/End: Original strand, 44809835 - 44809904
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||  |||||| ||||||||||||    
T  44809835 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 44809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 15429816 - 15429884
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  15429816 tgaagagagatgagatcaggtcttttgaatcatctatgttcccctaattggtatactacacctattctt 15429884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 15436430 - 15436498
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  15436430 tgaagagagatgagatcaggtcttttgaatcatctatgttcccctaattggtatactacacctattctt 15436498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 44164944 - 44164876
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||| |||| |||| | ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44164944 tgaagagacatgagatcaagtctttcgaatcatctatgttcccctaattggtatactacacatattctt 44164876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 3797587 - 3797686
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||| || |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  3797587 ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 3797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 19820194 - 19820143
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19820194 cttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 19820143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 21419253 - 21419202
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  21419253 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 21419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 33927131 - 33927068
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  33927131 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 33927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 35509430 - 35509379
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  35509430 cttgtgtaacaaaccacccaaattagggtttccttaatcgtgtcacgttttt 35509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 37103197 - 37103244
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  37103197 ctttcgaatcatctatgtttccctaattggtatactgcacctattctt 37103244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 52007187 - 52007238
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  52007187 cttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 52007238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 56195686 - 56195623
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  56195686 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 56195623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 27013311 - 27013229
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcata-aaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||| ||||| |||||| |||||||||||||| |||||||||||||||||   ||||| ||||||||||||    
T  27013311 ttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 27013229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 35510340 - 35510242
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| ||| || ||||| ||||| |||||||||||||||  ||| ||||||||||||||| |||||||  ||||||||||    
T  35510340 ttttagcaagtgtactaaaaatgtatccaagtaataaaataaattcgtatccacgaggactgtgttaatctcaatttagcaataaagtgaatatttagg 35510242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 15430505 - 15430562
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  15430505 ttcttccttgtgtaaaaaaccaccaaaattatggtttccataattgtgtcacgttttt 15430562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 15437119 - 15437176
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  15437119 ttcttccttgtgtaaaaaaccaccaaaattatggtttccataattgtgtcacgttttt 15437176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 18673045 - 18673110
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18673045 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 18673110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 44164253 - 44164196
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||    
T  44164253 ttcttccttgtgtaacaaaccactaaaattagggtttccataatcgtgtcacattttt 44164196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 454 - 518
Target Start/End: Original strand, 34320775 - 34320839
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgt 518  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||  |||||| |||||||    
T  34320775 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgt 34320839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 49270840 - 49270773
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||  |||||||||||||||| ||  |||||||||||||||||||||||||||    
T  49270840 tgaagagagatgagatcagt-ctttcgaatcatctatattctcctaattggtatactgcacatattctt 49270773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 3718589 - 3718538
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  3718589 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacattttt 3718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 5680550 - 5680491
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||| || |||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  5680550 ttttcttgttgtttaagcttgcttatgaactcaaaaatatcataaaaagactctaaaaat 5680491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 19826955 - 19826904
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  19826955 cttgtgtaacaaaccacaaaaattagggtttccataatcgtgtcacgttttt 19826904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 34319880 - 34319943
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| || ||||||||||||||||| |||||    
T  34319880 agagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctattc 34319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 15405044 - 15405106
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||| |||||| ||||||||||||||| ||| ||||||||| |||||||||| ||||    
T  15405044 agagagatgagatcaggtctttcgaatcatctaagttcccctaattgatatactgcacctatt 15405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 40795361 - 40795263
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||| | || |||||||||| |  ||| ||||||||||||||| ||||||| |||||||||||    
T  40795361 ttttagcaagtgtactaaaaatgtatcgaagtaataaaattagtttgtatccacgaagactgtgttaatctcaatttagcaataaagtaaatatttagg 40795263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 15431240 - 15431164
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  15431240 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 15437854 - 15437778
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  15437854 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 56199211 - 56199118
Alignment:
Q  76 tgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||||||| ||| ||| |||||||| |||||| ||||| ||| || |||||||||||||||  ||| ||||||||||||||| |||||    
T  56199211 tgatagatttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataa 56199118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 18911656 - 18911592
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| |||| |||||||||||||| |||||||||||||||||||| |||||||    
T  18911656 gagagatgagactaggtcttttgaatcatctatgttcccctaattggtatactgcacctattctt 18911592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 24044101 - 24044169
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||  ||| ||||||||| |||||||||||||||| ||| |||||||    
T  24044101 tgaagagagatgagatcaggtctttgaaattatctatgttcccctaattggtatactacacctattctt 24044169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 27677015 - 27677083
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| || ||| || ||||||||| |||||| | |||||||||||||||||| |||||||    
T  27677015 tgaagagagatgagataaggtctatcgaatcatttatgttcctctaattggtatactgcacctattctt 27677083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 348
Target Start/End: Complemental strand, 3719260 - 3719217
Alignment:
Q  305 cgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  3719260 cgaatcatccatgtttccctaattggtatactgcacctattctt 3719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 12782365 - 12782318
Alignment:
Q  354 tgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  12782365 tgtaacaaacaacctaaattagggtttccataatcgtgtcacgttttt 12782318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 15812099 - 15812162
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| |||||||  |||| ||||| |||||||||||||||||||| |||||    
T  15812099 agagagatgagatcaggtctttcgatacatcgatgttcccctaattggtatactgcacctattc 15812162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 40794467 - 40794416
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||||||    
T  40794467 cttgtgcaacaaaccacctaaattagggtttccataatcttgtcacgttttt 40794416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 46955440 - 46955503
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||| || ||| |||| |||||||| ||||| |||||||||||||||||||| ||||    
T  46955440 aagagagatgagattaggtcttttgaatcatcgatgttcccctaattggtatactgcacctatt 46955503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 48415485 - 48415557
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctat----gtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||| ||||||    ||| |||||||||||||||||||| |||||||    
T  48415485 tgaagagagatgagatcaggtctttcgaattatctatatatgttcccctaattggtatactgcacctattctt 48415557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 5681776 - 5681702
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaa 157  Q
    ||||||| ||| ||| |||||||| |||||| ||||| ||||| || ||||||||||||  ||||||||||||||    
T  5681776 tttttagcaagtgtactaaaaatgcatcgaagtaataaaataagtttgtatccacgaggactgtattaatctcaa 5681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 10386263 - 10386189
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||  ||||||||||    
T  10386263 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttagg 10386189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 15432238 - 15432172
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  15432238 aagagagatgagactaggtctttcgagtcatcgatgttcccctaattggtatactgcacctattctt 15432172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 35510150 - 35510085
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||||||| || |||||||||||||||| ||| |||||||    
T  35510150 agagagatgagtttaggtctttcgaatcatctatattcccctaattggtatactacacctattctt 35510085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 56195884 - 56195791
Alignment:
Q  76 tgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||||||| ||| ||| |||||||| |||||| ||||| ||| || ||||||| |||||||  ||| ||||||||||||||| |||||    
T  56195884 tgatagatttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtattcacgaggattgtgttaatctcaatttagcaataa 56195791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 5706550 - 5706486
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  5706550 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 5706486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 12238423 - 12238359
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  12238423 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 12238359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 15445165 - 15445225
Alignment:
Q  121 aataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttag 181  Q
    ||||| |||||||||||||||  ||  ||||||||||||||| ||||||| ||||||||||    
T  15445165 aataagttcgtatccacgaggactgatttaatctcaatttagcaataaagtaaatatttag 15445225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 15811909 - 15811993
Alignment:
Q  85 tttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    ||||| ||| ||| |||||||| |||||| ||||| ||| || |||||||||||||||  ||| ||||||||||||||| |||||    
T  15811909 tttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataa 15811993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 27014561 - 27014513
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  27014561 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 27014513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 38283302 - 38283350
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  38283302 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 38283350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 18860119 - 18860035
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||| ||| |||||||  |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  18860119 ttttagcaagtgtactaaaaat--atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 18860035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 29324983 - 29324921
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||| | |||||| ||||||||||||| ||| |||||||||||||||| ||||| |||||    
T  29324983 agagagatcagatcaggtctttcgaatcatcgatg-ttccctaattggtatattgcacctattc 29324921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 523
Target Start/End: Complemental strand, 49269786 - 49269735
Alignment:
Q  472 tcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||||| |||||||||||   |||||| ||||||||||||    
T  49269786 tcaaaaatatcataaaaaaactctaaaaatgtaaaatgactgactgtcatca 49269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 8871728 - 8871782
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactg 337  Q
    |||||||||| |||||| ||||| ||||||||| ||| || ||||||||||||||    
T  8871728 agagagatgagatcaggtctttcaaatcatctaagttcccttaattggtatactg 8871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 8877463 - 8877525
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||| |||||| ||||| ||||||||| ||| ||||| || ||||||||||| ||||    
T  8877463 agagagatgagatcaggtctttcaaatcatctaagttcccctatttagtatactgcacctatt 8877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 11649236 - 11649306
Alignment:
Q  99 taaaaatgaatcgaaataatacaa-taatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||||| |||||||||||| || ||| |||||||||| ||||  ||| ||||||||||||||| |||||    
T  11649236 taaaaatgtatcgaaataataaaaataagttcgtatccatgaggactgtgttaatctcaatttagcaataa 11649306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 12238548 - 12238510
Alignment:
Q  144 tgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  12238548 tgtattaatctcaatttagcaataaagtaaatatttagg 12238510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 24043902 - 24044000
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||||| ||| |||||||| || | | ||||| ||||| || |||| ||  |||  ||| ||||||||||||||| ||||||| |||||||||||    
T  24043902 ttttagtaagtgtactaaaaatgtattgcagtaataaaataagtttgtattcataaggactgtgttaatctcaatttagcaataaagtaaatatttagg 24044000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 419
Target Start/End: Original strand, 24044903 - 24044937
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgat 419  Q
    ||||||||||| |||||||||||||||||||||||    
T  24044903 aatcgtgtcacatttttcagtaatcgtgacacgat 24044937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 27676882 - 27676916
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  27676882 ttaatctcaatttagaaataaagtaaatatttagg 27676916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 3798720 - 3798796
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| || |||||||||| |||| ||| ||||||||| | ||||| ||||||||||||    
T  3798720 ttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 3798796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 15429656 - 15429717
Alignment:
Q  121 aataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||| |||||||||||||||  ||  ||||||||||||||  ||||||| |||||||||||    
T  15429656 aataagttcgtatccacgaggactgatttaatctcaatttatcaataaagtaaatatttagg 15429717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 15436270 - 15436331
Alignment:
Q  121 aataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||| |||||||||||||||  ||  ||||||||||||||  ||||||| |||||||||||    
T  15436270 aataagttcgtatccacgaggactgatttaatctcaatttatcaataaagtaaatatttagg 15436331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 21419947 - 21419882
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||| ||||| |||||||||||||||  ||| |||||||    
T  21419947 agagagatgagtttaggtctttcgaatcatcgatgttcccctaattggtataccacacctattctt 21419882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 25962217 - 25962152
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||| |||||  |||||||||||||| |||| |||||||    
T  25962217 agagagatgagtttaggtctttcgaatcatcgatgttctcctaattggtataccgcacctattctt 25962152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 53009521 - 53009586
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||| ||||| |||||||| |||||||| ||||||||||| |||||||    
T  53009521 agagagatgagtttaggtcttttgaatcgtctatgttcccctaattagtatactgcacctattctt 53009586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 8875418 - 8875470
Alignment:
Q  349 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||| |||  ||||| | |||||| |||||||||||||||||    
T  8875418 ccttgtgtaacaaacaacctgaattaggatttccaaaatcgtgtcacgttttt 8875470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 40902896 - 40902944
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  40902896 ccacgaggactgtgttaatctcaatttagtaataaagtaaatatttagg 40902944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 121)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 10880924 - 10880776
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagtttt---------ttcttgctgcttaatcttgcttgtgaattca 474  Q
    |||||||||||||||||||  |||||||||||||||||||||| |||||||||||  |||         ||||||||||||||||||||||||||| |||    
T  10880924 aatcgtgtcacgtttttcataaatcgtgacacgatgccttttttcagcttcttcaactttatcttgcttttcttgctgcttaatcttgcttgtgaactca 10880825  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||||||||||  |||| | ||||||||||||    
T  10880824 aaaatatcataaaaagactctaaaaatagcaaataactgactgtcatca 10880776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 385 - 524
Target Start/End: Original strand, 29344624 - 29344774
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 474  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||| |||||        |||||||||||||||||||||||||| |||    
T  29344624 aatcgtgtcacgtttttcaataatcgtgacacgatccccttttttcagtttcttcaatttttcttgcttttcttgctgcttaatcttgcttgtgaactca 29344723  T
Q  475 aaaatatcataa-aaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||||||||||| |||||||||||||||| | ||||| |||||||||||||    
T  29344724 aaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatcag 29344774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 53815120 - 53814971
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttttcttg---------ctgcttaatcttgcttgtgaattc 473  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||| |||||||| |||||||||         |||||||| |||||||||||| ||    
T  53815120 aatcgtgacacgtttttcagtaattgtgacacgatgccttcttttcagtttcttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactc 53815021  T
Q  474 aaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  53815020 aaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 53814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 34984602 - 34984758
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagtttttt------------------cttgctgcttaatcttgctt 465  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||                  |||| |||||||||||||||    
T  34984602 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttttcagcttct-cagttttttgtttcttttcttgcttttcttgttgcttaatcttgctt 34984700  T
Q  466 gtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  34984701 gtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 34984758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 393 - 523
Target Start/End: Complemental strand, 41976461 - 41976321
Alignment:
Q  393 cacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    ||||||||||||||||||||||||||| ||  |||||||| |||||||||||||        |||||||| ||||||||||||||||| ||||||||||     
T  41976461 cacgtttttcagtaatcgtgacacgatccccttttttcagtttcttcagtttttgttgcttttcttgctgtttaatcttgcttgtgaactcaaaaatatt 41976362  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||| ||||||||||||   ||||| ||||||||||||    
T  41976361 ataaaaacactctaaaaatagcgaatgactgactgtcatca 41976321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 442 - 525
Target Start/End: Complemental strand, 16243247 - 16243164
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcagg 525  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||| ||| ||||||||||    
T  16243247 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgattgtcatcagg 16243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 43809003 - 43808898
Alignment:
Q  406 aatcgtgacacgatgcctttttc-agcttcttcagtttttt-------cttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaa 497  Q
    ||||||||||||||||||||||  |||||||||| ||||||       ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43809003 aatcgtgacacgatgcctttttttagcttcttcattttttttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaa 43808904  T
Q  498 aaataa 503  Q
    ||||||    
T  43808903 aaataa 43808898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 20728594 - 20728662
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20728594 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 20728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 442 - 530
Target Start/End: Complemental strand, 54460448 - 54460360
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcaggaaaca 530  Q
    |||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||    
T  54460448 ttttcttgttgcttaagattgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatcagtaaaca 54460360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 20729336 - 20729477
Alignment:
Q  384 taatcgtgtcacgtttttcagtaatcgtgacacgatgc-cttt-ttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatat 481  Q
    |||||||| ||||||||||||| ||||||||| ||| | |||| ||||| |||||| | ||||||||||||||||| |||||||||||| | ||||||||    
T  20729336 taatcgtgacacgtttttcagttatcgtgacatgattcactttcttcagtttcttc-gatttttcttgctgcttaagcttgcttgtgaactaaaaaatat 20729434  T
Q  482 cat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||| ||||| ||||||||||||   ||||| ||||||||||||    
T  20729435 cataaaaaaaactctaaaaatagcgaatgactgactgtcatca 20729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 24125743 - 24125678
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24125743 agagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24125678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 24129020 - 24128955
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24129020 agagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24128955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 2775729 - 2775661
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2775729 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 2775661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 2778972 - 2778904
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2778972 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 2778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 16244120 - 16244052
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  16244120 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 16244052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 25584924 - 25584856
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  25584924 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25584856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 45896628 - 45896560
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  45896628 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 45896560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 8461436 - 8461502
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  8461436 aagagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 8461502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 2873808 - 2873743
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2873808 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 2873743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 6922764 - 6922699
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  6922764 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 6922699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 7486815 - 7486750
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7486815 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 7486750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 30690980 - 30690915
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  30690980 agagagataagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 30690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 32287273 - 32287338
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  32287273 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 32287338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 34984491 - 34984548
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  34984491 ttcttccttgtgtaacaaaccacccaaattagggttttcataatcgtgtcacgttttt 34984548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 41976550 - 41976493
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  41976550 ttcttccttgtgtaacaaaccacccaaattagggttttcataatcgtgtcacgttttt 41976493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 53816072 - 53816007
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  53816072 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 53816007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 54461456 - 54461347
Alignment:
Q  73 aaatgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagca 172  Q
    |||||||||  |||||| ||| ||| |||| ||| |||||| ||||| ||||| |||||||| |||| | |||||||||||||||||||| ||||||| |    
T  54461456 aaatgatagacttttagcaagtgtattaaacatgcatcgaagtaataaaataagttcgtatctacgaagaatgtattaatctcaatttagcaataaagta 54461357  T
Q  173 aatatttagg 182  Q
    ||||||||||    
T  54461356 aatatttagg 54461347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 515
Target Start/End: Original strand, 54736769 - 54736842
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgac 515  Q
    |||||||| ||||||| |||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||    
T  54736769 ttttcttgttgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaatagtgaatgattgac 54736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 442 - 522
Target Start/End: Complemental strand, 9380092 - 9380012
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatc 522  Q
    |||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||   ||||| |||||||||||    
T  9380092 ttttcttattgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 29343821 - 29343889
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  29343821 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 29343889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 43927082 - 43927014
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  43927082 tgaagagagatgagatcatgtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 43927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 10902385 - 10902286
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||| ||| ||| |||||||| ||| || ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  10902385 tttttagcaagtgtactaaaaatgtatctaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 10902286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 16185575 - 16185634
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  16185575 ttttcttgctgcttaagcttgtttgtgaactcaaaaatatcataaaaagactctaaaaat 16185634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 35411758 - 35411699
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  35411758 ttttcttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 35411699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 3839874 - 3839790
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat---aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||| |||||||||||| |||||||||||||   ||||| |||||||||||| | ||||| ||||||||||||    
T  3839874 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcattaaaaaaaaactctaaaaatagtgaatgactgactgtcatca 3839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 28266161 - 28266099
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  28266161 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 28266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 11190771 - 11190706
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  11190771 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 11190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 11785010 - 11784945
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  11785010 agagagatgaacttaggtctttcgaatcatcgatgttcccctaattggtatactgcacatattctt 11784945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 16184637 - 16184702
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  16184637 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 16184702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 19305470 - 19305547
Alignment:
Q  446 cttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||  ||||||| || ||||||||    
T  19305470 cttgctgtttaagcttgcttgtgaactcaaaaatattataaaaagactctaaaaatatgaaatgatggattgtcatca 19305547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 31548810 - 31548753
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  31548810 ttctgccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 31548753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 10881727 - 10881659
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| |||| | ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10881727 tgaagaaagatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10881659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 10902187 - 10902127
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcac 340  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||    
T  10902187 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcac 10902127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 31549419 - 31549351
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | |||||| |||| |||||||||| |||||||||||||||||||||||| |||||||    
T  31549419 tgaagagagataagatcaggtcttttgaatcatctaagtttccctaattggtatactgcacctattctt 31549351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 49742866 - 49742934
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||| |||||| |||||||||||||| ||||| |||||||    
T  49742866 tgaagagagatgagatcaggtctttcgaatcatttatgttcccctaattggtatattgcacctattctt 49742934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 52309562 - 52309630
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  52309562 tgaagagagatgagatcaggtctttcgaatcaactatgttcccctaattggtatattgcacctattctt 52309630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 10881909 - 10881826
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||||| |||||||||||    
T  10881909 taaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatatcaatttagcaataaagtaaatatttagg 10881826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 20728410 - 20728493
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||| ||||| ||||| |||||||||| ||||  ||| ||||||||||||||| |||||||  ||||||||||    
T  20728410 taaaaatgaatcgaagtaataaaataagttcgtatccatgaggactgtgttaatctcaatttagcaataaagtgaatatttagg 20728493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 31548632 - 31548573
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    ||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  31548632 ttttcttactgcttaagcttggttgtgaactcaaaaatatcataaaaagactctaaaaat 31548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 47051740 - 47051677
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||    
T  47051740 agagagatgagatcaggtctttcgaatcatctatgttcccctaactggtatactgcacctattc 47051677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 50461498 - 50461561
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  50461498 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 50461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 6434728 - 6434790
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    |||||||||| || ||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  6434728 agagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 6434790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 178
Target Start/End: Complemental strand, 52200350 - 52200256
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatt 178  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||||| |||||||    
T  52200350 ttttagcaagtgtattaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatt 52200256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 539071 - 539006
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| |||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  539071 agagagatgagattaggtctttcgaatcatatatgtttccctaattggtatactacacctattctt 539006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 447
Target Start/End: Original strand, 6445513 - 6445577
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttct 447  Q
    ||||||| ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||    
T  6445513 aatcgtgacacgtttttcagtaatcgtgacacgatgccctcttttcagtttcttcagttttttct 6445577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 17528711 - 17528776
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| | ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  17528711 agagagatgagattaggtcgttcgaatcatctatgttcccctaattgatatactgcacatattctt 17528776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 523
Target Start/End: Original strand, 19302295 - 19302364
Alignment:
Q  454 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||  |||| ||||||    
T  19302295 ttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatgaaatgacggactatcatca 19302364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 22416784 - 22416849
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  22416784 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacttattctt 22416849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 27092138 - 27092073
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||| |||||  ||||||||||||||||||| |||||||    
T  27092138 agagagatgagatcaggtctttcgaatcatcgatgttctcctaattggtatactgcacctattctt 27092073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 37408925 - 37408860
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37408925 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37408860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 43809824 - 43809767
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcac 340  Q
    |||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  43809824 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcac 43809767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 46885184 - 46885119
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  46885184 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 46885119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 54723986 - 54723921
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||| ||||||||||||||| || ||||||||||||||||| |||||||    
T  54723986 agagagatgagatcaggtcttccgaatcatctatgttcccataattggtatactgcacctattctt 54723921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 10885299 - 10885203
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatattta 180  Q
    |||||| ||| ||| |||||||| ||| || ||||| ||||| || ||||||||||||  ||| ||||||||||||||| ||||||| |||||||||    
T  10885299 ttttagcaagtgtactaaaaatgcatcaaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatattta 10885203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 10885083 - 10885036
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10885083 ctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10885036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 16243425 - 16243374
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  16243425 cttgtgtaacaaaccacccaaattaggggttccataatcgtgtcatgttttt 16243374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 28007829 - 28007927
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||| ||| |||||| | ||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||| |||||||||||    
T  28007829 ttttagcaagtgtactaaatatgcatcgaagtgataaaataagttcgtatccacgaggactatgttaatctcaatttagcaataaagtaaatatttagg 28007927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 29344513 - 29344567
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtt 398  Q
    ||||||||||||||||||||| || |||||| ||||||||||||| |||||||||    
T  29344513 ttcttccttgtgtaacaaacctccaaaattagggtttccataatcatgtcacgtt 29344567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 31549604 - 31549530
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||||| ||||| ||||||||||||| |  ||| ||||||||||||||| ||||||| |||||||||||    
T  31549604 atcgaagtaataaaataagttcgtatccacgatgactgtgttaatctcaatttagcaataaagtaaatatttagg 31549530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 32367098 - 32367136
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32367098 ctttcgaatcatctatgtttccctaattggtatactgca 32367136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 41977453 - 41977347
Alignment:
Q  76 tgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaat 175  Q
    |||||| ||||||| ||| ||| |||||||| |||||| ||||| ||||| || ||||| ||||||  ||| ||||||| ||||||| ||||||  ||||    
T  41977453 tgatagatttttagcaagtgtattaaaaatgtatcgaagtaataaaataagtttgtatctacgaggactgtgttaatcttaatttagcaataaaataaat 41977354  T
Q  176 atttagg 182  Q
    |||||||    
T  41977353 atttagg 41977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 52309382 - 52309480
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||    | ||||| ||||||||| ||||||| |||||||||||    
T  52309382 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggacaatgttaatttcaatttagcaataaagtaaatatttagg 52309480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 10884094 - 10884018
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  10884094 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 12561184 - 12561249
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  12561184 agagagatgagtttaggtctttcgaatcatctatgttcccctaattgatatactgcacctattctt 12561249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 23299477 - 23299553
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  23299477 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 23299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 28008021 - 28008086
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  28008021 agagagatgagattaggtctttcgaatcatctatgttccccaaatttgtatactgcacctattctt 28008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 35751685 - 35751628
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcac 340  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||| |||||||||||    
T  35751685 agagagatgagatcaggtctttcgaatcatcgatgttcccctaatttgtatactgcac 35751628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 52990944 - 52990879
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  52990944 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataccgcacctattctt 52990879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 54720215 - 54720150
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  54720215 agagagatgagtttaggtctttcgaatcatctatgtttccataattggtatattgcacctattctt 54720150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 3293591 - 3293643
Alignment:
Q  349 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||| ||||||||||||||||||| |||||||  |||||||||||||||||    
T  3293591 ccttgtataacaaaccacccaaattagggtttcctgaatcgtgtcacgttttt 3293643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 3840764 - 3840696
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| |||||| ||||||||||||| ||||| ||||||||| |||||| ||| |||||||    
T  3840764 tgaagatagatgagatcaggtctttcgaatcatccatgttcccctaattgatatactacacctattctt 3840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 41977248 - 41977180
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||| |||||||| |||||  |||||||||||||| ||||  ||||||||||||||||||| |||||||    
T  41977248 tgaatagagatgagatcagatctttcgaatcatctgtgttctcctaattggtatactgcacttattctt 41977180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 3840067 - 3840016
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||| | | |||| ||||||||||||||||||||||||||    
T  3840067 cttgtgtaacaaaccatctacattagggtttccataatcgtgtcacgttttt 3840016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 47055170 - 47055107
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||||||||| || ||| | ||||||||||| |||||    
T  47055170 agagagatgagatcaggtctttcgaatcatctatgttcccataactagtatactgcacctattc 47055107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 16184486 - 16184540
Alignment:
Q  128 tcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||| |||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  16184486 tcgtttccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 16184540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 16244317 - 16244219
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||  |||||| ||||| ||||| || |||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  16244317 ttttagcaagtgtactaaaaatacatcgaagtaataaaataagtttgtatacacgaggaccgtgttaatctcaatttagtaataaagtaaatatttagg 16244219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 448
Target Start/End: Complemental strand, 54460525 - 54460460
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttctt 448  Q
    ||||||| |||| |||| ||||||||||||||||||||   ||||||| |||||||||||||||||    
T  54460525 aatcgtgacacgctttttagtaatcgtgacacgatgcccacttttcagtttcttcagttttttctt 54460460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 55031947 - 55032009
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    ||||||||| |  ||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  55031947 gagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 55032009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 55034807 - 55034869
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    ||||||||| |  ||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  55034807 gagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 55034869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 538091 - 538015
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||| ||||||| |||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  538091 ttgctgtttaaacttgtttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 6921966 - 6921890
Alignment:
Q  447 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||| ||||||||||| | ||||| ||||||||||||    
T  6921966 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaaggctctaaaaatagtgaatgactgactgtcatca 6921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 10881035 - 10880978
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||| |||||| |||||||| ||  |||||| ||||||||||||||||||||||||||    
T  10881035 ttctgccttgtttaacaaacaactgaaattagggtttccataatcgtgtcacgttttt 10880978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 17531626 - 17531671
Alignment:
Q  303 ttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||    
T  17531626 ttcgaatcatctatgttcctctaattggtatactgcacctattctt 17531671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 23298565 - 23298630
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||||||||||||| ||| || |||||||||| |||||| |||||||    
T  23298565 agagagatgagattaggtctttcgaatcatctaagttcccttaattggtatgctgcacctattctt 23298630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 25442809 - 25442874
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||| |||||| |||||||||||||| ||||| |||||||    
T  25442809 agagagatgagtttaggtctttcgaatcatttatgttcccctaattggtatattgcacctattctt 25442874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 30219955 - 30220020
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||| | ||||||||||||||| ||| |||||||||||  ||||||| |||||||    
T  30219955 agagagatgagatcatgtctttcgaatcatctaagttcccctaattggtcaactgcacctattctt 30220020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 48064005 - 48064050
Alignment:
Q  303 ttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||    
T  48064005 ttcgaatcatctatgttcccctaattggtatactgcatctattctt 48064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 8461307 - 8461351
Alignment:
Q  138 gagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||    
T  8461307 gaggaatgtgttaatctcaatttagaaataaagtaaatatttagg 8461351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 10106551 - 10106614
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| |||| ||||||||||||||||| ||||||||||||||||| |||||||    
T  10106551 gagagatgagactaggtcttttgaatcatctatgtttcc-taattggtatactgcacctattctt 10106614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 18641723 - 18641787
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  18641723 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 18641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 18644719 - 18644783
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  18644719 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 18644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 43927234 - 43927186
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  43927234 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 43927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 52200156 - 52200092
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||||||||  ||||| |||||||||||||||||||| |||||||    
T  52200156 gagagatgagactaggtctttcgaatcattgatgttcccctaattggtatactgcacctattctt 52200092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 2279416 - 2279478
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  2279416 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 2279478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 2775865 - 2775831
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  2775865 ttaatctcaatttagaaataaagtaaatatttagg 2775831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 2779107 - 2779073
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  2779107 ttaatctcaatttagaaataaagtaaatatttagg 2779073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 2784438 - 2784376
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  2784438 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 2784376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 9392967 - 9392925
Alignment:
Q  294 atcaggactttcgaatcatctatgtttccctaattggtatact 336  Q
    |||||| |||| |||||||||||||| ||||||||||||||||    
T  9392967 atcaggtcttttgaatcatctatgttcccctaattggtatact 9392925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 16243320 - 16243286
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgat 419  Q
    ||||||| |||||||||||||||||||||||||||    
T  16243320 aatcgtgacacgtttttcagtaatcgtgacacgat 16243286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 45896761 - 45896727
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  45896761 ttaatctcaatttagaaataaagtaaatatttagg 45896727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 49742733 - 49742767
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  49742733 ttaatctcaatttagaaataaagtaaatatttagg 49742767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 17039972 - 17040037
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||| |||| |||||| ||||||||||||| ||||| || ||||||||||||  ||| |||||||    
T  17039972 agagaaatgagatcaggtctttcgaatcatcgatgttcccttaattggtatacaacacttattctt 17040037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 17141652 - 17141587
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||| |||| ||||||||| |||||||||||||| ||||| |||||||    
T  17141652 agagagatgagcttaggtcttttgaattatctatgttcccctaattggtatattgcacctattctt 17141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 28265149 - 28265112
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc 422  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  28265149 aatcgtgacacatttttcagtaatcgtgacacgatgcc 28265112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 47055317 - 47055276
Alignment:
Q  127 ttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  47055317 ttcgtatccacgaggattgtgttaatctcaatttagaaataa 47055276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 55034681 - 55034774
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatat 177  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| ||||||||||| ||   | | ||||| ||||||||| ||||||| ||||||    
T  55034681 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacaagaactatgttaatttcaatttagcaataaagtaaatat 55034774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 417
Target Start/End: Complemental strand, 3839962 - 3839930
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacg 417  Q
    ||||||| |||||||||||||||||||||||||    
T  3839962 aatcgtgacacgtttttcagtaatcgtgacacg 3839930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 24125884 - 24125836
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  24125884 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 24125836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 35412753 - 35412689
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||| ||||| ||||| | |||||||||||||||||| |||||||    
T  35412753 gagagatgagactaggtctttcgagtcatcaatgttcctctaattggtatactgcacctattctt 35412689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 35412890 - 35412842
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  35412890 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 35412842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 523
Target Start/End: Original strand, 49743785 - 49743825
Alignment:
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  49743785 ataaaaagactctaaaaataactaatgactgactgtcatca 49743825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 71; Significance: 8e-32; HSPs: 5)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 4723 - 4880
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttttc------------------ttgctgcttaatcttgctt 465  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||                  |||||||||||||||| ||    
T  4723 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttttcagcttcttcagttttttcttgcttttctttctttttttgctgcttaatcttgttt 4822  T
Q  466 gtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  4823 gtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 4880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 4631 - 4687
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtttt 400  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  4631 ttcttccttgtgtaacaaaccacccaaattagggtttctataatcgtgtcacatttt 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 8179 - 8247
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  8179 tgaagagagataagatcaggtctttcgaatcatttatgtttccctaattggtatactacacctattctt 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 1312 - 1410
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| ||||| |||||||||  | | ||||||||||||||| ||||||| |||||||||||    
T  1312 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtgtccacgaggactctgttaatctcaatttagcaataaagtaaatatttagg 1410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 1509 - 1576
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | |||||  |||||||||||| ||| ||||||||||||||| ||||||| |||||||    
T  1509 tgaagagagattagatcagatctttcgaatcatatat-tttccctaattggtaaactgcacctattctt 1576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 383 - 524
Target Start/End: Original strand, 28666044 - 28666177
Alignment:
Q  383 ataatcgtgtcacgtttttcagtaatcgtgacacgatgcctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 482  Q
    ||||||||| ||||||||||||| ||||||||| ||| || |||       |||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  28666044 ataatcgtgacacgtttttcagttatcgtgacatgattcccttt-------cttcagtttt-tcttgctgcttaagcttgcttgtgaactcaaaaatatc 28666135  T
Q  483 ataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||||||||||||||||||||  ||||| |||||||||||||    
T  28666136 ataaaaagactctaaaaataacgaatgactgactgtcatcag 28666177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 525
Target Start/End: Complemental strand, 10289334 - 10289184
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 474  Q
    ||||||||||||||||||||||||| ||||||||| ||  |||||||| |||||| ||||||        ||||| |||||||||||||||||||| |||    
T  10289334 aatcgtgtcacgtttttcagtaatcttgacacgatccccttttttcagtttcttcggtttttcttgcttttcttgttgcttaatcttgcttgtgaactca 10289235  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatcagg 525  Q
    ||||||||||||||||||||||||||||   ||||| | ||||||||||||    
T  10289234 aaaatatcataaaaagactctaaaaatagcgaatgacttactgtcatcagg 10289184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 442 - 524
Target Start/End: Complemental strand, 9953117 - 9953035
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||   ||||||  ||||||||||||    
T  9953117 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtgaaatgacagactgtcatcag 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 30655608 - 30655540
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30655608 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacttattctt 30655540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 9839357 - 9839422
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9839357 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9839422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 10289445 - 10289388
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  10289445 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 10289388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 11402418 - 11402353
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11402418 agagagatgagatcaggtctttcgattcatctatgtttccctaattggtatactgcacctattctt 11402353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 17106570 - 17106638
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||| | ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  17106570 tgaagagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatattgcacatattctt 17106638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 9954125 - 9954059
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9954125 aagagagatgagatcagctctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9954059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 2379391 - 2379326
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  2379391 agagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatactgcacctattctt 2379326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 14281483 - 14281548
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  14281483 agagagatgacatcaggtctttcgaatcatctatgttcccctaattgggatactgcacctattctt 14281548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 24400340 - 24400275
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24400340 agagagatgagtttaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24400275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 24410459 - 24410394
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24410459 agagagatgagtttaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24410394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 20185908 - 20185840
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | ||||||  |||||||||||||||||| |||||||||||||||||||| |||||||    
T  20185908 tgaagagagataagatcaggtttttcgaatcatctatgttcccctaattggtatactgcacctattctt 20185840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 22150083 - 22150151
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | ||||||  |||||||||||||||||| |||||||||||||||||||| |||||||    
T  22150083 tgaagagagataagatcaggtttttcgaatcatctatgttcccctaattggtatactgcacctattctt 22150151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 10290336 - 10290237
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||| ||| ||| |||||||| |||||| ||||| ||||| || ||||||||||||  ||| ||||||||||||||| |||||||  ||||||||||    
T  10290336 tttttagcaagtgtactaaaaatgtatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaataaagtgaatatttagg 10290237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 26942398 - 26942461
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||||| |||||    
T  26942398 agagagatgagatcaggtctttcgattcatctatgttcccctaattggtatactgcacctattc 26942461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 28665920 - 28665971
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  28665920 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 28665971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 10290134 - 10290068
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| | |||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||    
T  10290134 aagagagataagatcaggtctttcgaatcatctatgttccccgaattggtatactgcacttattctt 10290068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 23842586 - 23842660
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||  |||||||||||    
T  23842586 atcgaaataataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaaataaatatttagg 23842660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 3596744 - 3596809
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| |||||||||||| |||||| |||||||||||||||||||| |||||||    
T  3596744 agagagatgagattaggtctttcgaatcatttatgttcccctaattggtatactgcacctattctt 3596809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 4512637 - 4512572
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  4512637 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 4512572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 6513417 - 6513352
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| |||||||||||||||| || ||||||||| |||||||||| |||||||    
T  6513417 agagagatgagatcaggtctttcgaatcatctatattcccctaattgatatactgcacctattctt 6513352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 13005350 - 13005285
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||||||||| ||| |||||||    
T  13005350 agagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatacttcacctattctt 13005285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 18855988 - 18856053
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18855988 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 18856053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 19476163 - 19476098
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |  || ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  19476163 agagagatgaattttggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 19476098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 22561126 - 22561191
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||| ||||||||| ||| |||||||||||||||||||| |||||||    
T  22561126 agagagatgagatcaggtctttcaaatcatctacgttcccctaattggtatactgcacctattctt 22561191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 23384715 - 23384780
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  23384715 agagagatgagattaggtctttcgattcatctatgttcccctaattggtatactgcacctattctt 23384780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 26896222 - 26896287
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  26896222 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26896287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 2372396 - 2372349
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  2372396 ctttcgaatcatctatgttcccctagttggtatactgcacatattctt 2372349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 489
Target Start/End: Complemental strand, 13004481 - 13004434
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaa 489  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13004481 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 13004434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 13947161 - 13947114
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  13947161 ctttcgaatcatctatgttcccctaattggtatactgcacctattctt 13947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 7128460 - 7128398
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  7128460 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataatgcacatatt 7128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 32109830 - 32109764
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||| |||| |||||| |||||||    
T  32109830 aagagagatgagatcaggtctttcgaatcatcaatgttcccctaatttgtatgctgcacctattctt 32109764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 5738039 - 5738112
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgttt-----ccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||||||||||      |||||||||||||||||||| |||||||    
T  5738039 tgaagagagatgagatcaggtctttcgaatcatctatgttatgttcccctaattggtatactgcacctattctt 5738112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 24155329 - 24155394
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||| |||||| |||||||||||||||||||| |||||||    
T  24155329 agagagatgagtttaggtctttcgaatcatatatgttcccctaattggtatactgcacctattctt 24155394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 28107750 - 28107803
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatact 336  Q
    |||||||||| ||||||  |||||||||||||||||| ||||||||||||||||    
T  28107750 agagagatgatatcaggtatttcgaatcatctatgttcccctaattggtatact 28107803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 22561782 - 22561834
Alignment:
Q  349 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||||||||||||||||| |||||||| ||| ||| |||||||||    
T  22561782 ccttgtgtaacaaaccacccaaattagggtttccaaaattgtgccacgttttt 22561834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 11125678 - 11125725
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  11125678 ctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 11125725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 17106391 - 17106490
Alignment:
Q  83 tttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||| ||| ||| |||||||| |||||| ||||| ||||| ||||||||||||| |   || |||||||||||||   ||||||| |||||||||||    
T  17106391 tttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaagacagtgttaatctcaatttcacaataaagtaaatatttagg 17106490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 23847934 - 23847865
Alignment:
Q  281 gaagagagatgaaatcaggactttcgaatcatc---tatgtttccctaattggtatactgcacatattct 347  Q
    |||||||||||| |||||| |||||||||||||   ||| || |||||||||||||||||||| ||||||    
T  23847934 gaagagagatgagatcaggtctttcgaatcatcttttatattcccctaattggtatactgcacctattct 23847865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 23848108 - 23848034
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||| |||||| ||||| |||||||||||||||  ||| ||||||||||||||  | ||||| |||||||||||    
T  23848108 atcgacataataaaataagttcgtatccacgaggactgtgttaatctcaatttaacactaaagtaaatatttagg 23848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 502
Target Start/End: Complemental strand, 20181343 - 20181294
Alignment:
Q  453 cttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaata 502  Q
    ||||| |||||||||||| |||||||||||| |||| |||||||||||||    
T  20181343 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaata 20181294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 502
Target Start/End: Original strand, 22154648 - 22154697
Alignment:
Q  453 cttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaata 502  Q
    ||||| |||||||||||| |||||||||||| |||| |||||||||||||    
T  22154648 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaata 22154697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 23842759 - 23842826
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||  ||||||||| ||||||||| ||||||||| |||| ||||| |||||||    
T  23842759 tgaagagagatgagatcagttctttcgaat-atctatgttcccctaattgttatattgcacttattctt 23842826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 1125697 - 1125763
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| | || | |||||||||||| ||||||  |||||||||||||||| || |||||||    
T  1125697 aagagagatgagagcatgtctttcgaatcatttatgttctcctaattggtatactggacctattctt 1125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 11188035 - 11188069
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  11188035 ttaatctcaatttagaaataaagtaaatatttagg 11188069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 11729167 - 11729201
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  11729167 ttaatctcaatttagaaataaagtaaatatttagg 11729201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 524
Target Start/End: Original strand, 12987037 - 12987075
Alignment:
Q  486 aaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  12987037 aaaagaccctaaaaataatgaatgattgactgtcatcag 12987075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 14966549 - 14966487
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  14966549 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 14966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 20186078 - 20186020
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaa 157  Q
    |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||    
T  20186078 taaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaa 20186020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 22149913 - 22149971
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaa 157  Q
    |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||    
T  22149913 taaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaa 22149971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 30655744 - 30655710
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  30655744 ttaatctcaatttagaaataaagtaaatatttagg 30655710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 23381993 - 23382041
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  23381993 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 23382041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 23384573 - 23384621
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||| ||||||||||||||||| |||||||||||    
T  23384573 ccacgaggactgtgttaatttcaatttagaaataaagtaaatatttagg 23384621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 28230738 - 28230690
Alignment:
Q  301 ctttcgaatcatctatgtttccc-taattggtatactgcacatattctt 348  Q
    |||||||||||| |||||| ||| ||||||||||||||||| |||||||    
T  28230738 ctttcgaatcatttatgttacccctaattggtatactgcacctattctt 28230690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 12582366 - 12582218
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 474  Q
    ||||||| ||||||||||| ||||||||||||||| ||  |||||||| |||||||||||||        |||| ||||||||||||||||||||| |||    
T  12582366 aatcgtgacacgtttttcaataatcgtgacacgatccccttttttcagtttcttcagtttttcttgcttttctttctgcttaatcttgcttgtgaactca 12582267  T
Q  475 aaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||||||||||||||   ||||||||| | ||||||    
T  12582266 aaaatatcataaaaagactctaaaaatagcgaatgattgattttcatca 12582218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 20887694 - 20887626
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20887694 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 20887626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 5538534 - 5538641
Alignment:
Q  75 atgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaa 174  Q
    ||||||| ||||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||| ||||  ||| ||||| ||||||||||||||||| |||    
T  5538534 atgatagatttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccatgaggactgtgttaatttcaatttagaaataaagtaaa 5538633  T
Q  175 tatttagg 182  Q
    ||||||||    
T  5538634 tatttagg 5538641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 5584356 - 5584422
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  5584356 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 5584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 393 - 523
Target Start/End: Original strand, 5981083 - 5981220
Alignment:
Q  393 cacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt-----tcttgctgcttaatcttgcttgtgaattcaaaaatatcata 485  Q
    |||||||||||||||| |||||||||| ||  ||||| || |||||||||||||     | || || ||||| |||||||||||| ||||||||||||||    
T  5981083 cacgtttttcagtaattgtgacacgattccctttttttagtttcttcagtttttcttgcttttcctacttaaacttgcttgtgaactcaaaaatatcata 5981182  T
Q  486 aaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||||   ||||||  |||||||||||    
T  5981183 aaaagactctaaaaatgtgaaatgacggactgtcatca 5981220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 23644143 - 23644069
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||||||| ||||| |||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  23644143 atcgaaataataaaataagttcgtatccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 23644069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 442 - 524
Target Start/End: Original strand, 45156837 - 45156919
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  45156837 ttttcttgctgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatagaatgataaactgtcatcag 45156919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 12516415 - 12516480
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||    
T  12516415 agagagatgaaatcaggtctttcgaatcatctatattcccctaattggtatactgcacctattctt 12516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 16953933 - 16953868
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  16953933 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 16953868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 12582471 - 12582420
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12582471 cttgtgtaacaaaccacccaaattagggtttccataatcgtgtcacgttttt 12582420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 14422074 - 14421991
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  14422074 taaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagtaataaagtaaatatttagg 14421991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 12583367 - 12583269
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||||||||| ||||| || ||||||||||||  | | ||||||||||||||| ||||||| |||||||||||    
T  12583367 ttttagcaagtgtactaaaaatgtatcgaaataataaaataagtttgtatccacgaggactatgttaatctcaatttagcaataaagtaaatatttagg 12583269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 5980964 - 5981021
Alignment:
Q  344 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  5980964 ttcttccttgtgaaacaaaccacccaaattagggtttccataatcgtgtcatgttttt 5981021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 10664055 - 10663990
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  10664055 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactacacctattctt 10663990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 14421902 - 14421837
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  14421902 agagagatgagatcaggtctttcgaatcatctatgttcccctaattgatatactgcacctattctt 14421837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 25231237 - 25231172
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| ||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  25231237 agagagttgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25231172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 38248362 - 38248427
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||  |||||| ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  38248362 agagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatattgcacatattctt 38248427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 5540917 - 5540973
Alignment:
Q  445 tcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  5540917 tcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 5540973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 14420945 - 14420886
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  14420945 ttttcttgttgcttaagcttgcttgtgaactaaaaaatatcataaaaagactctaaaaat 14420886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 18825850 - 18825913
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  18825850 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 18825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 18826771 - 18826834
Alignment:
Q  460 ttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||| |||||| ||||||||||||||||||||||||  |||||| ||||||||||||    
T  18826771 ttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 18826834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 25591441 - 25591504
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||||| ||||    
T  25591441 aagagagatgagatcaggtgtttcgaatcatctatgttcccctaattggtatactgcacctatt 25591504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 443 - 523
Target Start/End: Complemental strand, 30640587 - 30640505
Alignment:
Q  443 tttcttgctgcttaatcttgcttgtgaattcaaaaatatcata--aaaagactctaaaaataataaatgattgactgtcatca 523  Q
    ||||||||||||||| |||||||||||| |||||| |||||||  |||||| ||| |||||| | ||||||||||||||||||    
T  30640587 tttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaaaagattcttaaaatagtgaatgattgactgtcatca 30640505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 33883331 - 33883378
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  33883331 ctttcgaatcatctatgtttccctaattggtatactgcacctattctt 33883378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 36710599 - 36710662
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||    
T  36710599 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 36710662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 25594619 - 25594685
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |||||| |||||||||||||||| || |||||||| ||||||||||| |||||||    
T  25594619 aagagagatgagatcaggtctttcgaatcatctatcttcccctaattagtatactgcacctattctt 25594685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 10498177 - 10498242
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10498177 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10498242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 447
Target Start/End: Original strand, 17895369 - 17895433
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttct 447  Q
    ||||||| ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||    
T  17895369 aatcgtgacacgtttttcagtaatcgtgacacgatgccctcttttcagtttcttcagttttttct 17895433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 22173883 - 22173948
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||| ||| ||||    
T  22173883 tgaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactacacctatt 22173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 23619327 - 23619392
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  23619327 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 23619392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 45155232 - 45155297
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| ||| |||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  45155232 agagagctgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 45155297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 18721262 - 18721309
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18721262 ctttcgaatcatctatgttcccctaattggtatactgcacctattctt 18721309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 18824357 - 18824420
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| ||||||  |||||||||||| ||||| |||||||||||||||||||| |||||    
T  18824357 agagagatgagatcaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattc 18824420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 5980089 - 5980163
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| |||||  |||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  5980089 atcgaagtaataacataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 5980163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 5980276 - 5980341
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||| | ||||||||||||||||||| || ||||||||||||| ||| |||||||    
T  5980276 agagagatgagatcatgtctttcgaatcatctatgttcccttaattggtatactacacctattctt 5980341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 12583170 - 12583099
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcat---ctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| | |||| ||||||||||||   ||||||| |||||||||||||||||||| |||||||    
T  12583170 tgaagagagatgagaccaggtctttcgaatcatgatctatgttcccctaattggtatactgcacctattctt 12583099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 17931137 - 17931072
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| || ||| ||||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  17931137 agagagatgagattaggtctttcgaatcatcgatgtttccgtaattggtatattgcacctattctt 17931072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 21279732 - 21279797
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||  ||| || ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  21279732 agagagatgtgatcgggtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 21279797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 23643976 - 23643919
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcac 340  Q
    |||||||||| |||||| | ||||||||||| ||||| ||||||||||||||||||||    
T  23643976 agagagatgatatcaggtcgttcgaatcatcgatgttcccctaattggtatactgcac 23643919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 524
Target Start/End: Complemental strand, 19793009 - 19792925
Alignment:
Q  442 ttttcttgctgcttaatctt-gcttgtgaattcaaaaatatcata-aaaagactctaaaaataataaatgattgactgtcatcag 524  Q
    |||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||| | ||||   ||||||||||||    
T  19793009 ttttcttgttgtttaatctttgcttgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaatggccgactgtcatcag 19792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 14589584 - 14589647
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| || |||  |||||||||||| ||||| |||||||||||||||||||| |||||    
T  14589584 agagagatgagattaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattc 14589647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 44027074 - 44027121
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  44027074 ctttcgaatcatctatgttcccctaattgatataatgcacatattctt 44027121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 499
Target Start/End: Complemental strand, 25228096 - 25228039
Alignment:
Q  441 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaa 499  Q
    ||||||||||| ||| | |||||||||||| ||||||||||||| ||||||||||||||    
T  25228096 tttttcttgcttcttgagcttgcttgtgaactcaaaaatatcat-aaaagactctaaaa 25228039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 30645804 - 30645730
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| ||||||| |||||| ||||    
T  30645804 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagtaaatatatagg 30645730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 13197009 - 13196948
Alignment:
Q  287 agatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| ||||| |||||||||||||  | ||||||||||||||||| |||||||    
T  13197009 agatgagatcaggtctttcaaatcatctatgttctcttaattggtatactgcacttattctt 13196948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 31284810 - 31284765
Alignment:
Q  303 ttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||    
T  31284810 ttcgaatcatctatgttcccctaattggtataccgcacctattctt 31284765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 33419812 - 33419747
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  33419812 agagagatgagtttaggtctttcgaatcatttatgttcccctaatttgtatactgcacctattctt 33419747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 33883113 - 33883206
Alignment:
Q  75 atgataggtttttagtaagcgtaataaaaatgaatcgaaataatacaat-aatttcgtatccacgagggatgtattaatctcaatttagaaata 167  Q
    |||||||  |||||| ||| ||| |||||||| |||||| ||||| ||| || |||||||||||||||  ||| ||||||||||||||| ||||    
T  33883113 atgatagacttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaata 33883206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 23597504 - 23597456
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  23597504 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 23597456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 20887827 - 20887793
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  20887827 ttaatctcaatttagaaataaaggaaatatttagg 20887793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 22173769 - 22173803
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  22173769 ttaatctcaatttagaaataaagtaaatatttagg 22173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 41836225 - 41836295
Alignment:
Q  99 taaaaatgaatcgaaataatacaa-taatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||||| |||||||||||| || ||| |||||||||| ||||  ||| ||||||||||||||| |||||    
T  41836225 taaaaatgtatcgaaataataaaaataagttcgtatccatgaggactgtgttaatctcaatttagcaataa 41836295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 2560697 - 2560644
Alignment:
Q  295 tcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||| ||||| | ||||| ||||||| |||||||||||||||||| |||||||    
T  2560697 tcaggtctttcaagtcatcgatgtttctctaattggtatactgcacctattctt 2560644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 523
Target Start/End: Complemental strand, 10663075 - 10663011
Alignment:
Q  459 cttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||| |||| | |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  10663075 cttgcttgtgaactcaaca-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10663011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 64; Significance: 1e-27; HSPs: 4)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 4713 - 4563
Alignment:
Q  385 aatcgtgtcacgttttt-cagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttg---------ctgcttaatcttgcttgtgaatt 472  Q
    ||||||| ||||||||| || ||||||||||||||||||  ||||| || ||||||||||||||||||         |||||||| |||||||||||| |    
T  4713 aatcgtgacacgttttttcaataatcgtgacacgatgcccttttttaagtttcttcagttttttcttgattttcttgctgcttaagcttgcttgtgaact 4614  T
Q  473 caaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  4613 caaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 5711 - 5613
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| ||||| || |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  5711 ttttagcaagtgtactaaaactgcatcgaagtaataaaataagttcgtatccacgaggactgttttaatctcaatttagtaataaagtaaatatttagg 5613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 4818 - 4767
Alignment:
Q  350 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 401  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  4818 cttgtgtaataaaccacccaaattagggtttccataatcgtgtcacgttttt 4767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 5514 - 5446
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||||||| || ||||||||| |||| ||||| |||||||    
T  5514 tgaagagagatgagatcaggtctttcgaatcatctatattcccctaattgatatagtgcacctattctt 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 59; Significance: 1e-24; HSPs: 4)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 911 - 1060
Alignment:
Q  385 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagtttttt---------cttgctgcttaatcttgcttgtgaattc 473  Q
    ||||||| ||| |||||||||||||||||||||||||| |  |||||| ||||||||||||||         |||||||||||| |||||||||||| ||    
T  911 aatcgtgacacatttttcagtaatcgtgacacgatgccctcttttcagtttcttcagttttttcttgcttttcttgctgcttaagcttgcttgtgaactc 1010  T
Q  474 aaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||||||||||| ||||||||| ||   ||||| ||||||||||||    
T  1011 aaaaatatcataaaaatactctaaaagtagcgaatgactgactgtcatca 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 499
Target Start/End: Original strand, 4339 - 4396
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaa 499  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4339 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 499
Target Start/End: Original strand, 11469 - 11526
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaa 499  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  11469 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 11526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 26 - 89
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||| ||||| || ||||||||||||||||| |||||    
T  26 agagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctattc 89  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 283 - 215
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  283 tgaagagagatgagatcaggtctttcgaatcatatatgttcccctaattggtatactgcacatattctt 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 461 - 394
Alignment:
Q  115 taatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||| ||||| || ||||||||||||  ||| ||||||||||||||| |||| || |||||||||||    
T  461 taataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaatatagtaaatatttagg 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 53; Significance: 4e-21; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 198309 - 198241
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  198309 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 198241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 197323 - 197264
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  197323 ttttcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 197264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 198503 - 198405
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| ||| || ||||| ||||| |||||||||||||||  ||| ||||| ||||||||| ||||||| |||||||||||    
T  198503 ttttagcaagtgtactaaaaatgcatcaaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagg 198405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 248680 - 248612
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  248680 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 248612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 248864 - 248785
Alignment:
Q  99 taaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatt 178  Q
    |||||||| |||||| ||||| ||||| ||||| |||||||||  ||| || |||||||||||| ||||||| |||||||    
T  248864 taaaaatgcatcgaagtaataaaataagttcgtgtccacgaggactgtgttgatctcaatttagcaataaagtaaatatt 248785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 246269 - 246328
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 501  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  246269 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 246328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 293182 - 293117
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  293182 agagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 293318 - 293270
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  293318 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 293270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 2846 - 2748
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  2846 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 2748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 2659 - 2595
Alignment:
Q  284 gagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||| |  ||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  2659 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 5360 - 5426
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  5360 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 5426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 6472 - 6554
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||   ||||| ||||||||||||    
T  6472 ttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 6554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 5222 - 5270
Alignment:
Q  134 ccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  5222 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 27470 - 27372
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaagcaaatatttagg 182  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  27470 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 27372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 27271 - 27203
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  27271 tgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 27203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 500
Target Start/End: Complemental strand, 26336 - 26277
Alignment:
Q  441 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaa 500  Q
    |||||| |||||||||   ||||||||||| |||||||||||||||||||||||||||||    
T  26336 tttttcatgctgcttatgtttgcttgtgaactcaaaaatatcataaaaagactctaaaaa 26277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 3751 - 3816
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  3751 agagagatgagatcaggtctttcgaatcatctatgttaccctaattggtatactgcacctattctt 3816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 89929 - 89866
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattc 346  Q
    |||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  89929 agagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatactgcacatattc 89866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 90119 - 90035
Alignment:
Q  84 ttttagtaagcgtaataaaaatgaatcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataa 168  Q
    |||||| ||| ||| |||||||| |||||| ||||| ||||| || ||||||||||||  ||| ||||||||||||||| |||||    
T  90119 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaataa 90035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 834 - 895
Alignment:
Q  287 agatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  834 agatgatatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 7675 - 7740
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  7675 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 7740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 7548 - 7582
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatatttagg 182  Q
    ||||||||||||||||||||||| |||||||||||    
T  7548 ttaatctcaatttagaaataaagtaaatatttagg 7582  T

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Target: scaffold0412 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 290 - 225
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  290 agagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 225  T

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Target: scaffold0250 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 19555 - 19490
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||| |||||||    
T  19555 agagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatactgcacctattctt 19490  T

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Target: scaffold0126 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 14281 - 14344
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| ||||    
T  14281 aagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 14344  T

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Target: scaffold1785 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 55 - 1
Alignment:
Q  294 atcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  55 atcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 1  T

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Target: scaffold1208 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 345 - 279
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||| || |||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  345 aagagagacgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctattctt 279  T

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Target: scaffold1208; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 469 - 437
Alignment:
Q  148 ttaatctcaatttagaaataaagcaaatattta 180  Q
    ||||||||||||||||||||||| |||||||||    
T  469 ttaatctcaatttagaaataaagtaaatattta 437  T

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Target: scaffold0191 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 4076 - 4010
Alignment:
Q  282 aagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||||  | ||| ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  4076 aagagagatgagtttaggtctttcgaatcatctatgtttctctaattggtatactgcacctattctt 4010  T

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Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 62665 - 62611
Alignment:
Q  294 atcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  62665 atcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 62611  T

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Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 64018 - 63953
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  64018 agagagatgagtttaggtctttcgaatcatctatgttcccctaatcggtatactgcacctattctt 63953  T

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Target: scaffold1993 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 1126 - 1045
Alignment:
Q  442 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataataaatgattgactgtcatca 523  Q
    |||||||| ||||||| ||| ||| |||| || |||||||||||||||||||||||||||   |||||| ||||||||||||    
T  1126 ttttcttggtgcttaagcttccttatgaactccaaaatatcataaaaagactctaaaaatgtgaaatgactgactgtcatca 1045  T

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Target: scaffold0321 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 2968 - 3033
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2968 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 3033  T

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Target: scaffold1809 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 227 - 171
Alignment:
Q  280 tgaagagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatact 336  Q
    ||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||    
T  227 tgaagagagatgagatcaggtctttcgaatcatatatgttcccctaattggtatact 171  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 241659 - 241597
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatatt 345  Q
    ||||| |||| |||||  ||||||||||||||||||| |||||||||||||||||||| ||||    
T  241659 agagatatgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctatt 241597  T

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Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 57552 - 57617
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||| |||||| |||||||||||||||||||  | ||||||||||| ||||| |||||||    
T  57552 agagagatgagatcaggtctttcgaatcatctatgttcacataattggtatattgcacctattctt 57617  T

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Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 15571 - 15506
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  15571 agagagatgagtttaggtctttcgaatcatctatgttcccctaattgggatactgcacctattctt 15506  T

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Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 58662 - 58709
Alignment:
Q  301 ctttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  58662 ctttcgaatcatctatgttcccctaatttgtatactgcacctattctt 58709  T

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Target: scaffold0218 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 10549 - 10503
Alignment:
Q  302 tttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||    
T  10549 tttcgaatcatcgatgttcccctaattggtatactgcacctattctt 10503  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 19439 - 19374
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| |||||||||||||||||||  ||| ||||||||||||||| |||||||    
T  19439 agagagatgagtttaggtctttcgaatcatctatgttcacctcattggtatactgcacctattctt 19374  T

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Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 29524 - 29459
Alignment:
Q  283 agagagatgaaatcaggactttcgaatcatctatgtttccctaattggtatactgcacatattctt 348  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||||||  |||||||||| |||||||    
T  29524 agagagatgagtttaggtctttcgaatcatctatgttcccctaatttttatactgcacctattctt 29459  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 6604 - 6542
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  6604 atcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaag 6542  T

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Target: scaffold0214 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 13936 - 13874
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  13936 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 13874  T

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Target: scaffold0214; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 27952 - 27890
Alignment:
Q  108 atcgaaataatacaataatttcgtatccacgagggatgtattaatctcaatttagaaataaag 170  Q
    |||||| ||||| ||||| |||||||||||||||  ||| |||||||||| |||| |||||||    
T  27952 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaag 27890  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 31236 - 31188
Alignment:
Q  301 ctttcgaatcatctatgtttccc-taattggtatactgcacatattctt 348  Q
    |||||||||||| |||||| ||| ||||||||||||||||| |||||||    
T  31236 ctttcgaatcatttatgttacccctaattggtatactgcacctattctt 31188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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