View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19626_high_3 (Length: 369)
Name: NF19626_high_3
Description: NF19626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19626_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 18 - 350
Target Start/End: Complemental strand, 1674073 - 1673741
Alignment:
| Q |
18 |
aaaactgacgcattttgaaaacttagacaacatagaaagaaaaatatataataacaaaaatgaaactttgtatgattaatgtgaatgtttatgaagaatt |
117 |
Q |
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| T |
1674073 |
aaaactgacgcattttgaaaacttagacaacatagaaagaaaaatatataataacaaaaatgaaactttgtatgattaatgtgaatgtttatgaagaatt |
1673974 |
T |
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| Q |
118 |
tgaaatgggttttgaagaaattcaaatgggtgtgttatttttatatgatgatgagaaaaagtatttttggtaatttttaattttgcattatgtattcaga |
217 |
Q |
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| T |
1673973 |
tgaaatgggttttgaagaaattcaaatgggtgtgttatttttatatgatgatgagaaaaagtatttttggtaatttttaattttgcattatgtattcaga |
1673874 |
T |
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| Q |
218 |
tggatatgaatatggaaaatgaagacggtgagcaaagatgacaagataaggccaactcaacacaacatggatttggaatgcaatgtttgcggattgtcta |
317 |
Q |
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| T |
1673873 |
tggatatgaatatggaaaatgaagacggtgagcaaagatgacaagataaggccaactcaacacaacatggatttggaatgcaatgtttgcggattgtcta |
1673774 |
T |
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| Q |
318 |
ttcatgaagcggttgcatgatgcatcttcttct |
350 |
Q |
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| T |
1673773 |
ttcatgaagcggttacatgatgcatcttcttct |
1673741 |
T |
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