View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19627_high_2 (Length: 287)
Name: NF19627_high_2
Description: NF19627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19627_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 8259180 - 8259436
Alignment:
| Q |
14 |
atatagctgcataaattaacacaaaaccatatatatggattcgcttctaaaatctccaatcatggagaacttgaaggaagaaccatttcttatggcaatc |
113 |
Q |
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| T |
8259180 |
atatagctgcataaattaacacaaaaccatatatatggattcgcttctaaaatctccaatcatggagaacttgaaggaagaaccatttcttatggcaatc |
8259279 |
T |
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| Q |
114 |
atgttcatcgtaccactaatactcttgttgggtttagtgtcacgaatcctcaaaagaccaagatatccaccaggaccaatagggttacctgttataggta |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
8259280 |
atgttcatcgtaccactaatactcttgttgggtttagtgtcacgaatcctcaaaagaccaagatatccaccaggaccaatagggttacctattataggta |
8259379 |
T |
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| Q |
214 |
acatgttaatgatggaccaattaacccaccgtggtctagccaacttagccaaaaaat |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8259380 |
acatgttaatgatggaccaattaacccaccgtggtctagccaacttagccaaaaaat |
8259436 |
T |
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