View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19627_low_2 (Length: 337)

Name: NF19627_low_2
Description: NF19627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19627_low_2
NF19627_low_2
[»] chr5 (54 HSPs)
chr5 (9-337)||(21329137-21329474)
chr5 (28-337)||(26011695-26012012)
chr5 (9-284)||(22959175-22959459)
chr5 (9-276)||(21565747-21566023)
chr5 (38-304)||(21741214-21741489)
chr5 (29-160)||(22144378-22144509)
chr5 (9-284)||(19669094-19669379)
chr5 (179-337)||(21501974-21502133)
chr5 (30-215)||(5888838-5889032)
chr5 (9-102)||(21985789-21985882)
chr5 (9-102)||(9078338-9078431)
chr5 (9-102)||(23390138-23390231)
chr5 (9-160)||(1096795-1096946)
chr5 (8-103)||(21292622-21292717)
chr5 (8-102)||(19660478-19660572)
chr5 (9-102)||(24529607-24529700)
chr5 (9-101)||(11580887-11580979)
chr5 (9-101)||(36154470-36154562)
chr5 (5-103)||(8286491-8286589)
chr5 (33-123)||(21498683-21498773)
chr5 (4-102)||(22119830-22119928)
chr5 (9-102)||(21871213-21871306)
chr5 (9-102)||(21875493-21875586)
chr5 (8-99)||(22107025-22107116)
chr5 (179-337)||(20026760-20026917)
chr5 (9-103)||(22075393-22075487)
chr5 (9-102)||(13095880-13095973)
chr5 (9-102)||(24493954-24494047)
chr5 (9-77)||(25421943-25422011)
chr5 (9-102)||(25431780-25431873)
chr5 (188-284)||(19660666-19660762)
chr5 (28-123)||(20026524-20026619)
chr5 (9-102)||(13025696-13025789)
chr5 (31-124)||(22177807-22177900)
chr5 (13-102)||(24766983-24767072)
chr5 (179-215)||(22120013-22120049)
chr5 (1-49)||(31342539-31342587)
chr5 (205-292)||(22178064-22178151)
chr5 (1-70)||(22032731-22032800)
chr5 (28-96)||(15796889-15796957)
chr5 (179-215)||(24767157-24767193)
chr5 (28-96)||(26732419-26732487)
chr5 (28-96)||(26740232-26740300)
chr5 (29-96)||(25744190-25744257)
chr5 (9-71)||(21366309-21366371)
chr5 (1-70)||(18769639-18769708)
chr5 (9-70)||(23201784-23201845)
chr5 (9-70)||(37724319-37724380)
chr5 (1-57)||(14079576-14079632)
chr5 (9-49)||(17918805-17918845)
chr5 (132-160)||(21501919-21501947)
chr5 (28-96)||(25574054-25574122)
chr5 (28-96)||(25575247-25575315)
chr5 (28-96)||(25576440-25576508)
[»] scaffold0138 (3 HSPs)
scaffold0138 (9-337)||(13083-13419)
scaffold0138 (189-292)||(18066-18169)
scaffold0138 (28-95)||(17821-17888)
[»] chr7 (67 HSPs)
chr7 (9-337)||(16219358-16219694)
chr7 (9-337)||(47831951-47832287)
chr7 (9-337)||(67887-68225)
chr7 (9-337)||(810771-811108)
chr7 (28-337)||(16056471-16056788)
chr7 (38-312)||(16324174-16324456)
chr7 (9-337)||(44014318-44014653)
chr7 (38-337)||(22073059-22073366)
chr7 (9-337)||(18005789-18006120)
chr7 (9-337)||(9389337-9389674)
chr7 (29-160)||(12255453-12255584)
chr7 (29-159)||(2279780-2279910)
chr7 (9-160)||(12756359-12756509)
chr7 (175-284)||(15754704-15754813)
chr7 (9-102)||(38227866-38227959)
chr7 (8-102)||(15754528-15754622)
chr7 (9-103)||(16385900-16385994)
chr7 (9-102)||(9509575-9509668)
chr7 (9-101)||(17061602-17061694)
chr7 (8-103)||(40443762-40443857)
chr7 (9-99)||(28504943-28505033)
chr7 (9-102)||(3564006-3564099)
chr7 (9-102)||(12699218-12699311)
chr7 (180-284)||(15113140-15113243)
chr7 (8-103)||(27847485-27847580)
chr7 (179-284)||(15116677-15116781)
chr7 (30-102)||(15143700-15143772)
chr7 (189-337)||(12901468-12901620)
chr7 (4-102)||(39267283-39267381)
chr7 (9-98)||(2831948-2832037)
chr7 (9-102)||(9751192-9751285)
chr7 (8-77)||(11995699-11995768)
chr7 (31-124)||(14045188-14045281)
chr7 (31-124)||(14355218-14355311)
chr7 (8-99)||(34201172-34201263)
chr7 (9-160)||(44116833-44116983)
chr7 (9-103)||(26212370-26212464)
chr7 (31-124)||(1867650-1867743)
chr7 (9-102)||(18302564-18302657)
chr7 (30-160)||(21064825-21064955)
chr7 (30-99)||(2529640-2529709)
chr7 (179-284)||(11995850-11995954)
chr7 (31-124)||(14036638-14036731)
chr7 (31-124)||(14346668-14346761)
chr7 (179-284)||(28505121-28505225)
chr7 (175-284)||(34200980-34201088)
chr7 (28-96)||(17017052-17017120)
chr7 (41-124)||(12901769-12901852)
chr7 (28-96)||(9177250-9177318)
chr7 (28-96)||(16092185-16092253)
chr7 (9-71)||(2760542-2760604)
chr7 (9-71)||(3272202-3272264)
chr7 (1-71)||(17137698-17137768)
chr7 (1-70)||(10508717-10508786)
chr7 (179-215)||(9751370-9751406)
chr7 (28-100)||(15008105-15008177)
chr7 (179-215)||(39267466-39267502)
chr7 (29-96)||(11768525-11768592)
chr7 (28-65)||(9032929-9032966)
chr7 (9-70)||(11880668-11880729)
chr7 (9-70)||(12187429-12187490)
chr7 (9-70)||(24054884-24054945)
chr7 (179-215)||(2529873-2529909)
chr7 (1-49)||(9703703-9703751)
chr7 (1-45)||(12318543-12318587)
chr7 (1-45)||(13462177-13462221)
chr7 (1-45)||(15581108-15581152)
[»] scaffold0243 (1 HSPs)
scaffold0243 (30-337)||(5785-6100)
[»] chr1 (59 HSPs)
chr1 (9-337)||(22921509-22921847)
chr1 (9-284)||(52927623-52927906)
chr1 (33-337)||(35981352-35981665)
chr1 (38-337)||(20636992-20637300)
chr1 (9-276)||(33681212-33681488)
chr1 (9-275)||(20248481-20248756)
chr1 (9-268)||(22237841-22238108)
chr1 (169-337)||(49261483-49261651)
chr1 (8-284)||(21754232-21754515)
chr1 (33-160)||(28194114-28194241)
chr1 (1-99)||(21162117-21162215)
chr1 (9-103)||(22355827-22355921)
chr1 (9-103)||(22357513-22357607)
chr1 (9-160)||(433335-433486)
chr1 (179-337)||(21861389-21861546)
chr1 (179-284)||(12271744-12271848)
chr1 (9-102)||(22532655-22532748)
chr1 (9-102)||(34510166-34510259)
chr1 (11-103)||(27250384-27250476)
chr1 (9-121)||(43697727-43697839)
chr1 (8-103)||(38801043-38801138)
chr1 (9-103)||(20846872-20846966)
chr1 (9-99)||(20918990-20919080)
chr1 (4-102)||(50209851-50209948)
chr1 (9-103)||(21027054-21027148)
chr1 (28-109)||(16367871-16367952)
chr1 (9-102)||(20135573-20135666)
chr1 (9-74)||(21301180-21301245)
chr1 (179-337)||(21896078-21896232)
chr1 (189-333)||(16368115-16368259)
chr1 (29-124)||(50687032-50687127)
chr1 (29-107)||(16093478-16093556)
chr1 (179-284)||(20918798-20918902)
chr1 (28-109)||(21895893-21895974)
chr1 (4-101)||(22354209-22354306)
chr1 (28-124)||(26065358-26065454)
chr1 (28-96)||(27652806-27652874)
chr1 (28-124)||(35260716-35260812)
chr1 (33-121)||(50613706-50613794)
chr1 (33-121)||(50621534-50621622)
chr1 (189-333)||(50686761-50686905)
chr1 (28-123)||(21861155-21861250)
chr1 (29-96)||(48521036-48521103)
chr1 (30-100)||(21342536-21342606)
chr1 (30-100)||(21347401-21347471)
chr1 (30-124)||(41049631-41049725)
chr1 (8-71)||(18181763-18181826)
chr1 (30-99)||(16759115-16759184)
chr1 (8-73)||(20091115-20091180)
chr1 (28-100)||(21533479-21533552)
chr1 (9-71)||(22432426-22432488)
chr1 (1-71)||(22831013-22831083)
chr1 (28-93)||(21683469-21683534)
chr1 (1-70)||(21787677-21787746)
chr1 (9-70)||(22468339-22468400)
chr1 (1-70)||(42864846-42864915)
chr1 (1-45)||(20228455-20228499)
chr1 (175-215)||(28194265-28194305)
chr1 (28-72)||(52940462-52940506)
[»] scaffold0530 (1 HSPs)
scaffold0530 (30-337)||(691-1011)
[»] chr6 (60 HSPs)
chr6 (30-337)||(23019550-23019865)
chr6 (9-284)||(19652390-19652674)
chr6 (30-337)||(22080400-22080717)
chr6 (1-160)||(4667847-4668006)
chr6 (9-311)||(27332926-27333236)
chr6 (9-311)||(27393666-27393976)
chr6 (1-160)||(4185457-4185616)
chr6 (1-160)||(4674694-4674853)
chr6 (1-160)||(4189284-4189443)
chr6 (9-284)||(29808525-29808809)
chr6 (175-284)||(1561498-1561607)
chr6 (1-102)||(31155032-31155133)
chr6 (9-284)||(28496115-28496398)
chr6 (9-160)||(18457043-18457193)
chr6 (189-337)||(19668516-19668664)
chr6 (8-102)||(1561689-1561783)
chr6 (9-99)||(19303183-19303273)
chr6 (9-103)||(20637936-20638030)
chr6 (9-159)||(25644651-25644801)
chr6 (9-102)||(22779869-22779962)
chr6 (5-103)||(20360609-20360707)
chr6 (9-102)||(17287438-17287531)
chr6 (8-103)||(16920285-16920380)
chr6 (9-160)||(25956263-25956414)
chr6 (9-103)||(18821472-18821566)
chr6 (9-102)||(18409469-18409562)
chr6 (13-102)||(29060926-29061015)
chr6 (205-292)||(9098370-9098457)
chr6 (9-102)||(25611365-25611458)
chr6 (189-287)||(35008344-35008442)
chr6 (9-102)||(21939769-21939862)
chr6 (9-73)||(15894072-15894136)
chr6 (28-92)||(33443517-33443581)
chr6 (10-73)||(22334525-22334588)
chr6 (29-99)||(19023838-19023908)
chr6 (28-98)||(20109605-20109675)
chr6 (9-102)||(20594159-20594252)
chr6 (28-96)||(17106180-17106248)
chr6 (205-268)||(20109354-20109417)
chr6 (8-71)||(22831908-22831971)
chr6 (38-96)||(18696955-18697013)
chr6 (1-71)||(21834525-21834595)
chr6 (10-103)||(11185876-11185969)
chr6 (9-102)||(25628997-25629090)
chr6 (28-96)||(20224412-20224480)
chr6 (28-96)||(22118396-22118464)
chr6 (28-96)||(23527711-23527779)
chr6 (28-96)||(23539386-23539454)
chr6 (28-74)||(18199019-18199065)
chr6 (38-96)||(18706706-18706764)
chr6 (1-71)||(21739657-21739727)
chr6 (189-287)||(23076926-23077024)
chr6 (39-73)||(25603057-25603091)
chr6 (9-70)||(19863395-19863456)
chr6 (28-124)||(9098110-9098206)
chr6 (28-72)||(18204572-18204616)
chr6 (28-96)||(19362892-19362960)
chr6 (1-49)||(22429676-22429724)
chr6 (9-57)||(22439230-22439278)
chr6 (28-96)||(35008618-35008686)
[»] chr8 (78 HSPs)
chr8 (9-337)||(38854893-38855229)
chr8 (9-337)||(6520511-6520847)
chr8 (9-337)||(21673847-21674184)
chr8 (9-276)||(26355340-26355616)
chr8 (9-337)||(23760482-23760822)
chr8 (97-337)||(21285741-21285989)
chr8 (30-160)||(39834160-39834290)
chr8 (9-158)||(19801069-19801218)
chr8 (9-160)||(41598512-41598663)
chr8 (8-99)||(5865918-5866009)
chr8 (9-102)||(18878879-18878972)
chr8 (8-99)||(17141302-17141393)
chr8 (8-103)||(45130672-45130767)
chr8 (5-103)||(31971629-31971727)
chr8 (9-102)||(6759643-6759736)
chr8 (9-102)||(7373135-7373228)
chr8 (9-102)||(18818052-18818145)
chr8 (9-98)||(21491382-21491471)
chr8 (9-98)||(22627125-22627214)
chr8 (9-102)||(23406767-23406860)
chr8 (9-99)||(16091983-16092073)
chr8 (4-102)||(20536594-20536692)
chr8 (8-102)||(21255605-21255699)
chr8 (1-103)||(25362785-25362887)
chr8 (6-99)||(23648942-23649035)
chr8 (9-102)||(28648686-28648779)
chr8 (4-99)||(21923565-21923660)
chr8 (8-102)||(21249767-21249861)
chr8 (179-284)||(5866097-5866201)
chr8 (9-102)||(21918652-21918745)
chr8 (28-124)||(24353464-24353560)
chr8 (8-103)||(16199299-16199394)
chr8 (9-124)||(20499024-20499139)
chr8 (28-99)||(37116813-37116884)
chr8 (28-98)||(17266577-17266647)
chr8 (188-284)||(17141110-17141206)
chr8 (28-124)||(17439090-17439186)
chr8 (28-98)||(40492436-40492506)
chr8 (30-123)||(13507672-13507765)
chr8 (30-123)||(13597204-13597297)
chr8 (179-284)||(21491189-21491293)
chr8 (28-100)||(2418460-2418532)
chr8 (28-96)||(22996313-22996381)
chr8 (9-102)||(22875451-22875544)
chr8 (28-124)||(982987-983083)
chr8 (206-337)||(983248-983382)
chr8 (28-96)||(16799958-16800026)
chr8 (189-333)||(17266821-17266965)
chr8 (205-337)||(20498707-20498839)
chr8 (179-255)||(21249607-21249682)
chr8 (28-99)||(37116085-37116157)
chr8 (189-292)||(22364851-22364954)
chr8 (28-99)||(22365128-22365199)
chr8 (8-70)||(21389094-21389156)
chr8 (30-96)||(21414890-21414956)
chr8 (1-71)||(22010314-22010384)
chr8 (189-287)||(37116543-37116641)
chr8 (1-70)||(19899510-19899579)
chr8 (1-49)||(377714-377762)
chr8 (1-49)||(20465674-20465722)
chr8 (179-255)||(21255445-21255520)
chr8 (9-71)||(15602660-15602722)
chr8 (9-71)||(15611112-15611174)
chr8 (9-71)||(16409898-16409960)
chr8 (9-71)||(16860980-16861042)
chr8 (30-96)||(19154472-19154538)
chr8 (28-122)||(20532991-20533085)
chr8 (1-71)||(30642926-30642996)
chr8 (1-70)||(17353572-17353641)
chr8 (28-109)||(22525951-22526032)
chr8 (1-49)||(23776468-23776517)
chr8 (28-72)||(17085760-17085804)
chr8 (1-45)||(18619894-18619938)
chr8 (14-70)||(21395630-21395686)
chr8 (14-70)||(21790123-21790179)
chr8 (1-45)||(22028973-22029017)
chr8 (28-100)||(23668251-23668323)
chr8 (189-292)||(24353210-24353316)
[»] chr3 (80 HSPs)
chr3 (9-337)||(14234631-14234969)
chr3 (9-337)||(15471068-15471403)
chr3 (9-276)||(32307872-32308147)
chr3 (9-284)||(49389286-49389554)
chr3 (30-337)||(1465072-1465388)
chr3 (9-284)||(12933952-12934236)
chr3 (28-160)||(324563-324695)
chr3 (9-284)||(16097525-16097809)
chr3 (9-284)||(49667726-49668009)
chr3 (11-284)||(9513104-9513387)
chr3 (11-284)||(9521079-9521362)
chr3 (9-284)||(1644325-1644608)
chr3 (29-159)||(52523389-52523519)
chr3 (9-289)||(16103971-16104259)
chr3 (9-160)||(53070341-53070491)
chr3 (30-160)||(2050864-2050992)
chr3 (4-102)||(14572974-14573072)
chr3 (9-160)||(17247928-17248079)
chr3 (9-160)||(40213363-40213514)
chr3 (8-102)||(14179708-14179802)
chr3 (9-102)||(11424405-11424498)
chr3 (9-102)||(17499725-17499818)
chr3 (9-102)||(18438920-18439013)
chr3 (10-102)||(17488243-17488335)
chr3 (9-103)||(20698089-20698183)
chr3 (9-102)||(26687273-26687366)
chr3 (179-271)||(13210148-13210240)
chr3 (9-97)||(14973245-14973333)
chr3 (9-102)||(12340138-12340231)
chr3 (9-99)||(4588457-4588547)
chr3 (9-75)||(12399608-12399674)
chr3 (8-102)||(13209969-13210062)
chr3 (4-102)||(25476022-25476120)
chr3 (9-102)||(14576475-14576568)
chr3 (9-246)||(12171759-12171992)
chr3 (4-160)||(23082998-23083155)
chr3 (30-124)||(605954-606048)
chr3 (9-102)||(12852006-12852099)
chr3 (30-123)||(23275106-23275199)
chr3 (10-103)||(30030213-30030306)
chr3 (9-94)||(43842572-43842657)
chr3 (9-77)||(17247162-17247230)
chr3 (189-333)||(37250996-37251140)
chr3 (28-100)||(45797631-45797703)
chr3 (189-296)||(22110180-22110287)
chr3 (189-292)||(43927322-43927425)
chr3 (30-124)||(12378360-12378454)
chr3 (30-100)||(14501587-14501657)
chr3 (37-102)||(13442660-13442725)
chr3 (9-102)||(14665991-14666084)
chr3 (9-102)||(14669146-14669239)
chr3 (9-102)||(14735504-14735597)
chr3 (29-122)||(21837866-21837959)
chr3 (30-123)||(23412836-23412929)
chr3 (28-92)||(316592-316656)
chr3 (28-124)||(43927544-43927640)
chr3 (28-99)||(22109936-22110007)
chr3 (175-215)||(12340017-12340057)
chr3 (179-215)||(14665870-14665906)
chr3 (179-215)||(14735383-14735419)
chr3 (28-124)||(37250773-37250869)
chr3 (41-160)||(42386739-42386858)
chr3 (8-103)||(16809774-16809865)
chr3 (4-49)||(26190647-26190692)
chr3 (179-215)||(4588608-4588644)
chr3 (28-96)||(9578070-9578138)
chr3 (1-49)||(11298164-11298212)
chr3 (179-215)||(14669025-14669061)
chr3 (29-96)||(37428162-37428229)
chr3 (1-71)||(12173199-12173269)
chr3 (9-71)||(12496668-12496730)
chr3 (9-71)||(18383560-18383622)
chr3 (1-71)||(23077113-23077183)
chr3 (1-70)||(856550-856619)
chr3 (9-70)||(15060706-15060767)
chr3 (9-70)||(15877471-15877532)
chr3 (1-49)||(321649-321697)
chr3 (9-49)||(3389600-3389640)
chr3 (9-49)||(3402609-3402649)
chr3 (9-49)||(17674218-17674258)
[»] chr4 (64 HSPs)
chr4 (9-337)||(39705930-39706266)
chr4 (30-337)||(15099492-15099808)
chr4 (30-337)||(15190459-15190775)
chr4 (9-284)||(8846569-8846854)
chr4 (9-284)||(12774194-12774477)
chr4 (29-160)||(15464591-15464722)
chr4 (30-160)||(43198251-43198381)
chr4 (29-160)||(52242855-52242986)
chr4 (189-337)||(12288038-12288186)
chr4 (9-160)||(13844867-13845018)
chr4 (8-103)||(14052954-14053049)
chr4 (9-98)||(14039039-14039128)
chr4 (9-102)||(15091283-15091376)
chr4 (9-102)||(16597031-16597124)
chr4 (9-103)||(7089251-7089345)
chr4 (9-103)||(12903131-12903224)
chr4 (8-102)||(15552199-15552293)
chr4 (9-102)||(16239634-16239728)
chr4 (4-102)||(22636820-22636918)
chr4 (9-102)||(6190819-6190912)
chr4 (9-102)||(22633855-22633948)
chr4 (9-102)||(44928565-44928658)
chr4 (9-160)||(21814945-21815095)
chr4 (9-160)||(21815274-21815424)
chr4 (9-160)||(21818367-21818517)
chr4 (30-109)||(15868298-15868377)
chr4 (9-103)||(3097017-3097111)
chr4 (9-103)||(16377164-16377258)
chr4 (9-99)||(44053218-44053308)
chr4 (9-102)||(20156932-20157025)
chr4 (9-102)||(7799083-7799176)
chr4 (9-102)||(13812451-13812544)
chr4 (9-102)||(24029127-24029220)
chr4 (1-96)||(17047718-17047813)
chr4 (189-292)||(46640285-46640387)
chr4 (179-337)||(16596789-16596946)
chr4 (28-109)||(13434-13515)
chr4 (189-333)||(53081979-53082124)
chr4 (28-96)||(17333749-17333817)
chr4 (9-101)||(44102597-44102688)
chr4 (28-124)||(53081758-53081854)
chr4 (179-221)||(22634033-22634075)
chr4 (30-100)||(32851839-32851909)
chr4 (28-109)||(26789793-26789874)
chr4 (28-96)||(152537-152605)
chr4 (28-96)||(15792243-15792311)
chr4 (179-215)||(24029006-24029042)
chr4 (179-214)||(3332151-3332186)
chr4 (188-255)||(15552039-15552106)
chr4 (30-124)||(12287796-12287890)
chr4 (1-71)||(16356588-16356658)
chr4 (39-77)||(17046727-17046765)
chr4 (181-215)||(20157112-20157146)
chr4 (205-337)||(13695-13827)
chr4 (28-96)||(16043481-16043549)
chr4 (28-124)||(46640041-46640137)
chr4 (29-96)||(32306581-32306648)
chr4 (1-71)||(15094187-15094257)
chr4 (179-213)||(32851642-32851676)
chr4 (8-70)||(44676047-44676109)
chr4 (1-45)||(3413212-3413256)
chr4 (1-49)||(13569948-13569996)
chr4 (179-215)||(13812629-13812665)
chr4 (9-49)||(16348335-16348375)
[»] scaffold0207 (1 HSPs)
scaffold0207 (9-337)||(2286-2623)
[»] scaffold0078 (1 HSPs)
scaffold0078 (30-337)||(10671-10986)
[»] scaffold0034 (2 HSPs)
scaffold0034 (28-337)||(32679-32996)
scaffold0034 (9-102)||(51526-51619)
[»] scaffold0556 (2 HSPs)
scaffold0556 (9-337)||(6953-7290)
scaffold0556 (38-337)||(8159-8466)
[»] scaffold0621 (2 HSPs)
scaffold0621 (9-337)||(6678-7015)
scaffold0621 (179-284)||(8666-8770)
[»] scaffold0333 (2 HSPs)
scaffold0333 (9-337)||(6755-7092)
scaffold0333 (9-337)||(14135-14472)
[»] chr2 (39 HSPs)
chr2 (31-337)||(28406120-28406436)
chr2 (9-335)||(25175995-25176321)
chr2 (9-284)||(22133859-22134141)
chr2 (9-160)||(23708261-23708411)
chr2 (184-337)||(7556-7709)
chr2 (9-102)||(23660408-23660501)
chr2 (206-337)||(18786748-18786879)
chr2 (8-103)||(20309479-20309574)
chr2 (9-103)||(23654052-23654146)
chr2 (9-102)||(298457-298550)
chr2 (9-102)||(22730875-22730968)
chr2 (9-102)||(27753961-27754054)
chr2 (189-333)||(23791423-23791567)
chr2 (9-103)||(23286235-23286329)
chr2 (9-98)||(22737822-22737911)
chr2 (30-99)||(23071626-23071695)
chr2 (8-92)||(28291943-28292027)
chr2 (8-103)||(37768-37863)
chr2 (12-102)||(22337501-22337591)
chr2 (179-284)||(22459381-22459485)
chr2 (9-102)||(32451571-32451664)
chr2 (9-160)||(23076769-23076919)
chr2 (189-333)||(23207426-23207570)
chr2 (189-292)||(25109078-25109181)
chr2 (28-124)||(22412720-22412816)
chr2 (28-124)||(23207718-23207814)
chr2 (28-76)||(39827600-39827648)
chr2 (1-70)||(24658055-24658124)
chr2 (28-96)||(18546549-18546617)
chr2 (30-100)||(19672290-19672360)
chr2 (28-109)||(23005184-23005265)
chr2 (28-124)||(18786469-18786565)
chr2 (28-96)||(20519777-20519845)
chr2 (9-71)||(25963360-25963422)
chr2 (50-107)||(24316108-24316165)
chr2 (28-99)||(25109354-25109426)
chr2 (28-96)||(26392850-26392918)
chr2 (1-45)||(27263667-27263711)
chr2 (1-49)||(45677790-45677838)
[»] scaffold0102 (2 HSPs)
scaffold0102 (9-337)||(19407-19745)
scaffold0102 (4-70)||(48098-48164)
[»] scaffold0211 (1 HSPs)
scaffold0211 (9-284)||(28451-28735)
[»] scaffold0028 (2 HSPs)
scaffold0028 (9-284)||(132848-133132)
scaffold0028 (179-337)||(62338-62496)
[»] scaffold0020 (1 HSPs)
scaffold0020 (9-292)||(15472-15764)
[»] scaffold0010 (2 HSPs)
scaffold0010 (9-284)||(130102-130386)
scaffold0010 (28-124)||(60299-60395)
[»] scaffold0810 (1 HSPs)
scaffold0810 (9-215)||(3196-3411)
[»] scaffold0125 (1 HSPs)
scaffold0125 (9-284)||(45431-45716)
[»] scaffold0001 (3 HSPs)
scaffold0001 (9-284)||(160880-161164)
scaffold0001 (28-72)||(446965-447009)
scaffold0001 (28-72)||(497896-497940)
[»] scaffold0628 (1 HSPs)
scaffold0628 (9-287)||(2445-2731)
[»] scaffold0476 (5 HSPs)
scaffold0476 (179-337)||(12910-13068)
scaffold0476 (1-71)||(5996-6066)
scaffold0476 (1-71)||(7191-7261)
scaffold0476 (28-98)||(13233-13303)
scaffold0476 (43-99)||(8191-8247)
[»] scaffold0150 (1 HSPs)
scaffold0150 (9-284)||(32288-32562)
[»] scaffold0023 (4 HSPs)
scaffold0023 (58-337)||(39863-40152)
scaffold0023 (179-337)||(100517-100676)
scaffold0023 (9-160)||(101723-101873)
scaffold0023 (184-255)||(101619-101690)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-160)||(9404-9563)
[»] scaffold1257 (1 HSPs)
scaffold1257 (179-337)||(2037-2196)
[»] scaffold0008 (2 HSPs)
scaffold0008 (169-337)||(14506-14675)
scaffold0008 (9-71)||(30388-30450)
[»] scaffold1984 (1 HSPs)
scaffold1984 (9-276)||(334-609)
[»] scaffold0507 (1 HSPs)
scaffold0507 (30-281)||(7720-7979)
[»] scaffold0218 (4 HSPs)
scaffold0218 (169-337)||(7886-8050)
scaffold0218 (9-98)||(28922-29011)
scaffold0218 (179-284)||(29100-29204)
scaffold0218 (28-109)||(7682-7763)
[»] scaffold0116 (2 HSPs)
scaffold0116 (30-160)||(43447-43577)
scaffold0116 (30-160)||(47367-47497)
[»] scaffold0278 (2 HSPs)
scaffold0278 (9-117)||(5964-6072)
scaffold0278 (179-337)||(5786-5944)
[»] scaffold0598 (1 HSPs)
scaffold0598 (8-103)||(704-799)
[»] scaffold0021 (6 HSPs)
scaffold0021 (10-136)||(62913-63039)
scaffold0021 (189-337)||(136196-136345)
scaffold0021 (189-337)||(144904-145053)
scaffold0021 (9-77)||(124993-125061)
scaffold0021 (41-124)||(135965-136048)
scaffold0021 (41-124)||(144673-144756)
[»] scaffold0266 (1 HSPs)
scaffold0266 (4-102)||(18595-18693)
[»] scaffold0503 (1 HSPs)
scaffold0503 (9-160)||(12257-12407)
[»] scaffold0413 (3 HSPs)
scaffold0413 (9-160)||(15257-15408)
scaffold0413 (189-337)||(12712-12860)
scaffold0413 (28-124)||(13008-13104)
[»] scaffold0056 (2 HSPs)
scaffold0056 (6-102)||(16854-16950)
scaffold0056 (12-101)||(79007-79096)
[»] scaffold0040 (2 HSPs)
scaffold0040 (189-337)||(103467-103615)
scaffold0040 (41-124)||(103257-103340)
[»] scaffold0647 (1 HSPs)
scaffold0647 (5-100)||(5759-5854)
[»] scaffold0395 (1 HSPs)
scaffold0395 (9-100)||(604-695)
[»] scaffold0175 (3 HSPs)
scaffold0175 (8-99)||(34509-34600)
scaffold0175 (9-95)||(13485-13571)
scaffold0175 (175-284)||(34317-34425)
[»] scaffold0120 (3 HSPs)
scaffold0120 (9-160)||(32601-32752)
scaffold0120 (9-160)||(46253-46404)
scaffold0120 (9-102)||(16473-16565)
[»] scaffold0031 (1 HSPs)
scaffold0031 (10-160)||(20069-20218)
[»] scaffold1137 (1 HSPs)
scaffold1137 (8-264)||(1942-2207)
[»] scaffold0555 (3 HSPs)
scaffold0555 (111-284)||(10284-10465)
scaffold0555 (9-79)||(10210-10280)
scaffold0555 (8-73)||(994-1059)
[»] scaffold0292 (2 HSPs)
scaffold0292 (9-103)||(3855-3949)
scaffold0292 (9-98)||(732-821)
[»] scaffold0261 (5 HSPs)
scaffold0261 (9-99)||(16047-16137)
scaffold0261 (179-337)||(15802-15959)
scaffold0261 (38-100)||(17937-17999)
scaffold0261 (9-70)||(1755-1816)
scaffold0261 (179-212)||(18163-18196)
[»] scaffold0876 (1 HSPs)
scaffold0876 (9-102)||(2727-2820)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-102)||(1712-1812)
[»] scaffold0305 (1 HSPs)
scaffold0305 (9-102)||(20789-20882)
[»] scaffold0228 (4 HSPs)
scaffold0228 (9-102)||(4894-4987)
scaffold0228 (9-102)||(12476-12569)
scaffold0228 (9-102)||(22428-22521)
scaffold0228 (1-49)||(18278-18326)
[»] scaffold0217 (1 HSPs)
scaffold0217 (9-102)||(16241-16334)
[»] scaffold0026 (4 HSPs)
scaffold0026 (9-102)||(40242-40335)
scaffold0026 (9-102)||(39573-39666)
scaffold0026 (43-99)||(59179-59235)
scaffold0026 (54-102)||(26611-26659)
[»] scaffold0016 (4 HSPs)
scaffold0016 (9-102)||(2237-2330)
scaffold0016 (7-102)||(207159-207254)
scaffold0016 (30-96)||(119214-119280)
scaffold0016 (179-215)||(207339-207375)
[»] scaffold0011 (3 HSPs)
scaffold0011 (9-102)||(52298-52391)
scaffold0011 (9-98)||(167632-167721)
scaffold0011 (28-96)||(37738-37806)
[»] scaffold0142 (1 HSPs)
scaffold0142 (9-101)||(17167-17259)
[»] scaffold0012 (1 HSPs)
scaffold0012 (29-129)||(227851-227951)
[»] scaffold0718 (1 HSPs)
scaffold0718 (8-103)||(4783-4878)
[»] scaffold0456 (1 HSPs)
scaffold0456 (8-103)||(10078-10173)
[»] scaffold0427 (1 HSPs)
scaffold0427 (8-103)||(13869-13964)
[»] scaffold1765 (1 HSPs)
scaffold1765 (179-337)||(1226-1383)
[»] scaffold0639 (1 HSPs)
scaffold0639 (4-98)||(8865-8959)
[»] scaffold0403 (1 HSPs)
scaffold0403 (9-103)||(5222-5316)
[»] scaffold0358 (2 HSPs)
scaffold0358 (9-103)||(310-404)
scaffold0358 (9-103)||(5086-5180)
[»] scaffold0320 (1 HSPs)
scaffold0320 (29-155)||(12329-12454)
[»] scaffold0161 (2 HSPs)
scaffold0161 (9-99)||(2087-2177)
scaffold0161 (179-284)||(2265-2369)
[»] scaffold0122 (2 HSPs)
scaffold0122 (6-160)||(25704-25858)
scaffold0122 (9-102)||(33136-33229)
[»] scaffold0221 (1 HSPs)
scaffold0221 (9-102)||(12451-12544)
[»] scaffold0145 (1 HSPs)
scaffold0145 (9-102)||(39145-39238)
[»] scaffold0100 (1 HSPs)
scaffold0100 (9-102)||(20498-20591)
[»] scaffold0352 (1 HSPs)
scaffold0352 (9-101)||(17650-17742)
[»] scaffold0114 (3 HSPs)
scaffold0114 (8-104)||(15117-15213)
scaffold0114 (8-59)||(32917-32968)
scaffold0114 (1-70)||(7705-7774)
[»] scaffold0064 (2 HSPs)
scaffold0064 (11-103)||(47360-47452)
scaffold0064 (8-70)||(64305-64367)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-96)||(6470-6557)
[»] scaffold0130 (2 HSPs)
scaffold0130 (9-100)||(28924-29015)
scaffold0130 (32-124)||(1368-1460)
[»] scaffold0113 (1 HSPs)
scaffold0113 (8-103)||(32438-32533)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-103)||(1288-1390)
[»] scaffold0389 (1 HSPs)
scaffold0389 (9-99)||(13250-13340)
[»] scaffold0235 (2 HSPs)
scaffold0235 (13-103)||(11170-11260)
scaffold0235 (30-100)||(14027-14097)
[»] scaffold0193 (1 HSPs)
scaffold0193 (9-103)||(13585-13679)
[»] scaffold0075 (4 HSPs)
scaffold0075 (4-102)||(7931-8029)
scaffold0075 (28-109)||(53132-53213)
scaffold0075 (179-215)||(8114-8150)
scaffold0075 (205-337)||(53393-53525)
[»] scaffold1842 (1 HSPs)
scaffold1842 (9-98)||(702-791)
[»] scaffold0627 (1 HSPs)
scaffold0627 (9-102)||(290-383)
[»] scaffold0121 (1 HSPs)
scaffold0121 (9-102)||(8175-8267)
[»] scaffold0042 (1 HSPs)
scaffold0042 (9-102)||(23944-24037)
[»] scaffold0003 (1 HSPs)
scaffold0003 (9-102)||(339593-339686)
[»] scaffold1351 (2 HSPs)
scaffold1351 (189-333)||(154-298)
scaffold1351 (28-124)||(446-542)
[»] scaffold0022 (4 HSPs)
scaffold0022 (28-124)||(128555-128651)
scaffold0022 (28-124)||(80702-80798)
scaffold0022 (189-333)||(78470-78614)
scaffold0022 (227-287)||(128837-128896)
[»] scaffold0076 (1 HSPs)
scaffold0076 (30-109)||(24183-24262)
[»] scaffold0351 (1 HSPs)
scaffold0351 (9-99)||(16657-16747)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-103)||(3855-3957)
scaffold0165 (1-103)||(7919-8021)
scaffold0165 (28-124)||(27303-27399)
[»] scaffold0231 (1 HSPs)
scaffold0231 (9-102)||(23268-23361)
[»] scaffold0540 (1 HSPs)
scaffold0540 (4-95)||(650-741)
[»] scaffold0490 (1 HSPs)
scaffold0490 (8-103)||(2326-2421)
[»] scaffold0309 (1 HSPs)
scaffold0309 (8-103)||(6984-7079)
[»] scaffold0123 (1 HSPs)
scaffold0123 (29-124)||(25546-25641)
[»] scaffold0080 (2 HSPs)
scaffold0080 (9-160)||(40240-40390)
scaffold0080 (189-285)||(19713-19809)
[»] scaffold0601 (1 HSPs)
scaffold0601 (29-123)||(7095-7189)
[»] scaffold0192 (2 HSPs)
scaffold0192 (4-102)||(10296-10394)
scaffold0192 (179-212)||(10178-10211)
[»] scaffold0088 (1 HSPs)
scaffold0088 (9-103)||(21275-21369)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-99)||(4912-4997)
[»] scaffold0037 (3 HSPs)
scaffold0037 (195-284)||(22509-22598)
scaffold0037 (9-102)||(79974-80067)
scaffold0037 (179-215)||(80152-80188)
[»] scaffold0357 (2 HSPs)
scaffold0357 (28-124)||(13571-13667)
scaffold0357 (30-124)||(3134-3228)
[»] scaffold0151 (1 HSPs)
scaffold0151 (9-77)||(10555-10623)
[»] scaffold0004 (2 HSPs)
scaffold0004 (28-96)||(332784-332852)
scaffold0004 (9-70)||(70211-70272)
[»] scaffold0423 (1 HSPs)
scaffold0423 (8-65)||(10913-10970)
[»] scaffold0347 (3 HSPs)
scaffold0347 (9-102)||(414-506)
scaffold0347 (179-215)||(293-329)
scaffold0347 (28-96)||(9356-9424)
[»] scaffold0166 (2 HSPs)
scaffold0166 (13-102)||(9480-9569)
scaffold0166 (179-215)||(9654-9690)
[»] scaffold0420 (2 HSPs)
scaffold0420 (189-333)||(6111-6255)
scaffold0420 (28-99)||(5916-5987)
[»] scaffold0139 (2 HSPs)
scaffold0139 (30-109)||(38752-38831)
scaffold0139 (192-292)||(38507-38607)
[»] scaffold0032 (1 HSPs)
scaffold0032 (8-103)||(51953-52048)
[»] scaffold0124 (1 HSPs)
scaffold0124 (8-98)||(24292-24382)
[»] scaffold0098 (2 HSPs)
scaffold0098 (30-100)||(29149-29219)
scaffold0098 (179-213)||(26855-26889)
[»] scaffold0005 (1 HSPs)
scaffold0005 (28-122)||(268094-268188)
[»] scaffold0327 (1 HSPs)
scaffold0327 (2-71)||(680-749)
[»] scaffold0046 (1 HSPs)
scaffold0046 (179-276)||(11494-11591)
[»] scaffold0106 (3 HSPs)
scaffold0106 (28-96)||(19252-19320)
scaffold0106 (8-71)||(1692-1755)
scaffold0106 (8-71)||(7669-7732)
[»] scaffold0084 (1 HSPs)
scaffold0084 (9-77)||(10569-10637)
[»] scaffold0014 (1 HSPs)
scaffold0014 (28-108)||(206109-206189)
[»] scaffold1403 (2 HSPs)
scaffold1403 (189-292)||(739-841)
scaffold1403 (38-122)||(992-1075)
[»] scaffold0780 (1 HSPs)
scaffold0780 (29-96)||(2934-3001)
[»] scaffold2080 (1 HSPs)
scaffold2080 (28-94)||(346-412)
[»] scaffold0586 (1 HSPs)
scaffold0586 (30-96)||(2245-2311)
[»] scaffold0367 (1 HSPs)
scaffold0367 (9-71)||(1307-1369)
[»] scaffold0109 (1 HSPs)
scaffold0109 (38-91)||(35541-35594)
[»] scaffold0006 (4 HSPs)
scaffold0006 (190-287)||(97201-97297)
scaffold0006 (190-287)||(106479-106575)
scaffold0006 (28-72)||(97498-97542)
scaffold0006 (28-72)||(106776-106820)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-49)||(16756-16804)
[»] scaffold0737 (2 HSPs)
scaffold0737 (189-292)||(1626-1729)
scaffold0737 (28-98)||(1382-1452)
[»] scaffold0210 (2 HSPs)
scaffold0210 (1-52)||(21441-21492)
scaffold0210 (1-52)||(29333-29384)
[»] scaffold0158 (2 HSPs)
scaffold0158 (3-70)||(3254-3321)
scaffold0158 (8-70)||(6920-6982)
[»] scaffold0035 (1 HSPs)
scaffold0035 (8-71)||(46369-46432)
[»] scaffold1895 (1 HSPs)
scaffold1895 (8-70)||(890-952)
[»] scaffold0393 (1 HSPs)
scaffold0393 (9-71)||(1904-1966)
[»] scaffold0029 (1 HSPs)
scaffold0029 (8-70)||(13173-13235)
[»] scaffold1124 (1 HSPs)
scaffold1124 (1-70)||(2291-2360)
[»] scaffold0297 (1 HSPs)
scaffold0297 (1-70)||(10456-10525)
[»] scaffold0280 (1 HSPs)
scaffold0280 (4-49)||(18940-18985)
[»] scaffold0268 (1 HSPs)
scaffold0268 (38-99)||(606-667)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-70)||(190916-190985)
scaffold0017 (1-70)||(192619-192688)
[»] scaffold0009 (1 HSPs)
scaffold0009 (31-96)||(86013-86078)
[»] scaffold1552 (1 HSPs)
scaffold1552 (1-45)||(769-813)
[»] scaffold1326 (1 HSPs)
scaffold1326 (9-49)||(1143-1183)
[»] scaffold0914 (1 HSPs)
scaffold0914 (28-96)||(2173-2241)
[»] scaffold0412 (1 HSPs)
scaffold0412 (9-49)||(6059-6099)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-49)||(15837-15885)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-49)||(6713-6761)
[»] scaffold0104 (2 HSPs)
scaffold0104 (11-71)||(2240-2300)
scaffold0104 (11-71)||(9922-9982)
[»] scaffold0079 (1 HSPs)
scaffold0079 (9-49)||(44486-44526)
[»] scaffold0077 (1 HSPs)
scaffold0077 (28-72)||(55269-55313)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 8e-89; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 21329137 - 21329474
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||| | |||||||| |||||||  ||||||||||||||||||||||| |||    
T  21329137 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataattt 21329236  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaat 199  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||||||| ||          ||  | ||| ||| |||||||||||||||||||||    
T  21329237 aggaatgaatttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtttaggttaaat 21329336  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  21329337 gcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattgtataat 21329436  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  21329437 ctaatgttgttgctaatgttatataattgtatatacat 21329474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 337
Target Start/End: Original strand, 26011695 - 26012012
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtag 127  Q
    ||||||||| || |||||| || || |||| |||||||||||| ||||||||  | |||||||||||||||||||||||||| ||||| |||||||| ||    
T  26011695 ctttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacctggaatagtttaagaatggatttttgggag 26011794  T
Q  128 ttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaat 218  Q
    ||  ||||||||||||||| ||||||||||||  ||          ||||| ||| ||| ||||| ||||| |||||||||| |||||||||| ||| |     
T  26011795 ttacacctgaactcgccatggcgagtagaggccttcgcctcgcgagttgtctagttacagaatgctttgtt-aggttaaatgtgatctttgtcacacgag 26011893  T
Q  219 ttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgt 318  Q
    ||||||  ||||||||||||||||||||||||||||| ||||||||| | || |||||||||||||||| || | |||||||| || ||||||   ||||    
T  26011894 ttgatgtgagttgatcttggaggttagaaactaagttgtttatcttgttattgttgtttcagtaagcctgaactatataatctgatgttgttgttgatgt 26011993  T
Q  319 tatataattgtatatacat 337  Q
    |||||||||||||||||||    
T  26011994 tatataattgtatatacat 26012012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 22959175 - 22959459
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||    
T  22959175 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 22959274  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    || |||||||||||||  |  |||||||||||||||||| ||||||||||||| ||           |  | ||| ||| ||||||||||||||||||||    
T  22959275 ta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaa 22959373  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||  |||| |||||| ||||||  |||||||||| ||||||| |||| ||||| ||||||||| |||| ||||| |||||||    
T  22959374 tgcgattcttgttgcacaagttgatgtgagttgatcttagaggttaaaaaccaagttgtttatcttgttgtttttgttccagtaag 22959459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 276
Target Start/End: Complemental strand, 21566023 - 21565747
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   |||    
T  21566023 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 21565924  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat--ctttgt-------ccagtcacataatgccttgtttaggttaaat 199  Q
      ||||||||||| |  | ||| ||||||||||||||| ||||| ||||||| |  | | ||       | ||| ||| |||| |||||||| || ||||    
T  21565923 tagaatgaattttcgtgaattgtacctgaactcgccatggcgagcagaggctctcgcctcgtgagctaactagttacagaatgacttgtttatgtaaaat 21565824  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 276  Q
    |||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| |||||    
T  21565823 gcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgtt 21565747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 304
Target Start/End: Original strand, 21741214 - 21741489
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaacctga 137  Q
    |||||||||||||||  ||| | || |||| |||||||||||  |||||||||||||||||||||||||||| ||| |||||| ||  ||||| ||||||    
T  21741214 ttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctggaatagtttaagaacgaatttatgtgagttgcacctga 21741313  T
Q  138 actcgccatagcgagtagaggctatct--ttgt-------ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctag 228  Q
    ||||||||| ||||||||||||| ||   | ||       ||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||  ||    
T  21741314 actcgccatggcgagtagaggctctcgcctcgtgagctaaccagttacataatgtcttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgag 21741413  T
Q  229 ttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 304  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |  || ||||||||||  |||||||| ||||||    
T  21741414 ttgatcttggaggttagaaactaagttaattaccttgatgttgtcattccagtaagcctggattgtatattctaat 21741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 22144509 - 22144378
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||||||||||  ||||||||||||||||||||||| |||| ||||| |||||||| |||    
T  22144509 tttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagt 22144410  T
Q  129 tgaacctgaactcgccatagcgagtagaggct 160  Q
    |  |||||||||||||||||||||||||||||    
T  22144409 tacacctgaactcgccatagcgagtagaggct 22144378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 19669379 - 19669094
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||| ||| || | ||    
T  19669379 ttttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactt 19669280  T
Q  108 taggaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaa 197  Q
    || |||||||||||| || | ||| ||||||||||||||| ||| ||||||||| ||           |  | ||| ||| ||||||||||||||| |||    
T  19669279 ta-gaatgaattttttgtgaattgtacctgaactcgccatggcgtgtagaggctctcgcctcaccagctaactagttacagaatgccttgtttaggataa 19669181  T
Q  198 atgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||| |||  ||||||||||| ||||||  |||||||||| |||||||||||||||||  ||||||||| |||| ||||| |||||||    
T  19669180 atgtgattcttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagtcgtttatcttgttgttgttgttccagtaag 19669094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 21501974 - 21502133
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttag-aaactaagttatttatcttgctgttattgttt 277  Q
    |||||||||||  ||||||||||||| |||||||||| | |||||| |||||||||||||| ||||| |||||||||| |||||||||||||| ||||||    
T  21501974 aatgccttgttg-ggttaaatgcgatatttgtcgcacgagttgatgttagttgatcttggaagttagaaaactaagttgtttatcttgctgttgttgttt 21502072  T
Q  278 cagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||||||| ||||  ||| ||||||| ||||||  ||||||||||||||||||||||||    
T  21502073 cagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatatacat 21502133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 5888838 - 5889032
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| |||||||||||||||  ||| | || ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||||  ||||    
T  5888838 ttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagtt 5888937  T
Q  130 gaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    | ||||||||||||||| ||||||||||||| ||           |  ||| | ||| |||||||||||||||||||||||||||||||||||||    
T  5888938 gcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtttaggttaaatgcgatctttgtcgcac 5889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 21985789 - 21985882
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  21985789 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 21985882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 9078431 - 9078338
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||| | || ||| |||||||||||||||||    
T  9078431 ttttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaa 9078338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 23390138 - 23390231
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  23390138 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 23390231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 1096946 - 1096795
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||| ||||||   ||     
T  1096946 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattg 1096847  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      ||||||| |||||| | |   ||||||||||||||  |||||||||||||    
T  1096846 cagaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggct 1096795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 21292622 - 21292717
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||| ||||||||||| || ||  ||||||||||||||||||    
T  21292622 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaat 21292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 19660478 - 19660572
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| ||  || ||||||| |||||||||    
T  19660478 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaa 19660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 24529700 - 24529607
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||||||| |||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  24529700 ttttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 24529607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 11580887 - 11580979
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    |||||||||||||| ||| | ||||| ||||||||||||||||| |||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  11580887 ttttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 11580979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 36154470 - 36154562
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    ||||||||||| || ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||| ||||||||||||||||    
T  36154470 ttttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctgga 36154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 8286491 - 8286589
Alignment:
Q  5 gtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||||||| ||| | |||||||| |||||||||| ||| ||||||||||||||||| |||||| || ||  ||||||||||||||||||    
T  8286491 gtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctggaat 8286589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 21498683 - 21498773
Alignment:
Q  33 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    |||| ||||||||||||||| |||| ||||||| ||||||| |||||| |||||||||||||||||||||||||| | |||| ||||||||    
T  21498683 gatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaatagttgaagaataaatttttg 21498773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 22119830 - 22119928
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  22119830 tgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 21871213 - 21871306
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| || |||||||||||||||| || ||  |||||||||||||||||    
T  21871213 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa 21871306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 21875493 - 21875586
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| || |||||||||||||||| || ||  |||||||||||||||||    
T  21875493 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa 21875586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 22107025 - 22107116
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||| ||||||||||||| || ||   |||||||||||||    
T  22107025 tttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctg 22107116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 20026760 - 20026917
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| || ||||||| || | ||||||||| | | ||||  |||||||||| ||||| |||||||||||| ||||||||| |||  |||||||    
T  20026760 aatgccttgtt-agcttaaatgtgaccgttgtcgcacgagtcgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgtagttgtttc 20026858  T
Q  279 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| |||| |||  | |||| ||||||  |||| |||||| ||||||||||||    
T  20026859 agtaagcctgaattatatgttttaatgttgttgataatgctatatagttgtatatacat 20026917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 22075487 - 22075393
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||| |||| || ||  ||| | ||||||||||||    
T  22075487 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctggaat 22075393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 13095973 - 13095880
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||  ||||||| |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  13095973 ttttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 13095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 24494047 - 24493954
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||| ||||||||||  ||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  24494047 ttttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 24493954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 25422011 - 25421943
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaaga 77  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25422011 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaaga 25421943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 25431873 - 25431780
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| || |||||||||||||||| |  ||  |||||||| ||||||||    
T  25431873 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaa 25431780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 19660666 - 19660762
Alignment:
Q  188 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||| ||||| ||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |||||||    
T  19660666 tttaggttgaatgcaatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaag 19660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 20026524 - 20026619
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||  |||| |||||||    
T  20026524 ctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttg 20026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 13025789 - 13025696
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||| ||||||| ||| | |||||| |||||||  ||||||| |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  13025789 ttttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 13025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 22177807 - 22177900
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||| |||||||||  | ||||||  |||| ||||||||    
T  22177807 tagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctgagaaagtttaaaaatggatttttgg 22177900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 24766983 - 24767072
Alignment:
Q  13 gacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||| |||||| || ||  |||||||||| ||||||    
T  24766983 gacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaa 24767072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 22120013 - 22120049
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  22120013 aatgccttgtttaggttaaatgcgatctttgtcgcac 22120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31342587 - 31342539
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  31342587 ttctgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 31342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 22178064 - 22178151
Alignment:
Q  205 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt 292  Q
    ||||||| ||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||| |||||||||||| ||||||||    
T  22178064 ctttgtcacacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaaacctaaatt 22178151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22032800 - 22032731
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  22032800 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 22032731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 15796957 - 15796889
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||| |||||||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  15796957 ctttagatggttttgagtgccagaatatgtataagaatgattaggcaagtttttagactgagattgaac 15796889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 24767157 - 24767193
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||| ||||||||||||||    
T  24767157 aatgccttgtttaggttaaatgtgatctttgtcgcac 24767193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 26732419 - 26732487
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| ||| ||  ||||||| |||||||    
T  26732419 ctttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 26732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 26740232 - 26740300
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| ||| ||  ||||||| |||||||    
T  26740232 ctttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 26740300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 25744257 - 25744190
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||| |||||||||||||||||||| ||| |||||||||| ||  ||  ||| |||||||||||    
T  25744257 tttagatggttttgagtgcctgaatatgtataagaatgattaggtaaatttttagactgagattgaac 25744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 21366309 - 21366371
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  21366309 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 21366371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18769639 - 18769708
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| |||||||||||| || ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  18769639 ttctgtatttttgacttttaagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 18769708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 23201845 - 23201784
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  23201845 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 23201784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 37724380 - 37724319
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  37724380 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 37724319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14079632 - 14079576
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgt 57  Q
    |||||| ||||||||||||||| | | | ||||||| |||||||||||| |||||||    
T  14079632 ttctgtatttttgacttttgagttcaaccttagatgtttttgagtgcctaaatatgt 14079576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17918805 - 17918845
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  17918805 ttttgacttttgagttgaaccttagatgcttttgagtgcct 17918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 21501919 - 21501947
Alignment:
Q  132 acctgaactcgccatagcgagtagaggct 160  Q
    |||||||||||||||||||||||||||||    
T  21501919 acctgaactcgccatagcgagtagaggct 21501947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 25574054 - 25574122
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||  ||| ||  ||||||| |||||||    
T  25574054 ctttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaac 25574122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 25575247 - 25575315
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||  ||| ||  ||||||| |||||||    
T  25575247 ctttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaac 25575315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 25576440 - 25576508
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||  ||| ||  ||||||| |||||||    
T  25576440 ctttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaac 25576508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 162; Significance: 2e-86; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 13419 - 13083
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| |||||| ||| | ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  13419 ttttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagttt 13320  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | |||||||||||||  ||||| ||||||||||||||| ||||||||||||  ||           |  ||||| ||| ||||||||||| |||||||||    
T  13319 aagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtt-aggttaaat 13221  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    | |||||||||| ||| | ||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  13220 gtgatctttgtcacacgagttgatgtgagttgatcatggagattagaaactaagttatttatcttgctgttgttgtttcagtaagcctgaattggataat 13121  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  13120 ctaatgttgttgctaatgttatataattgtatatacat 13083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 18066 - 18169
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  || ||||| ||| ||| ||||||||||||  ||||||  ||||| ||||||||||||||||     
T  18066 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatctcactgttgttgtttcagtaagcctg 18165  T
Q  289 aatt 292  Q
    ||||    
T  18166 aatt 18169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 17821 - 17888
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaa 95  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| ||| ||  |||||||| |||||    
T  17821 ctttagatgattttgaatgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaa 17888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 16219358 - 16219694
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| ||||||||| || ||  ||| |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  16219358 ttttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagttt 16219457  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaat 199  Q
    | |||||||||||||| ||||  || |||||||||||| ||||||||||||  ||          ||||| ||| ||| ||||||||||| |||||||||    
T  16219458 aagaatgaatttttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgtt-aggttaaat 16219556  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||    
T  16219557 gcgatctttgtcgcacaagttgatgttagttgatcttggaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatataat 16219656  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||  ||||||||||||||||||||||||    
T  16219657 ctaatgttgttgttaatgttatataattgtatatacat 16219694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 47832287 - 47831951
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  47832287 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatctggaatagttt 47832188  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| |||||||  | ||||  || |||||||||||| ||||||||||||  ||           || ||||| ||| ||||| |||||||||||||||    
T  47832187 aagaacgaattttgag-agttacacatgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 47832089  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    | ||||||||||| || | ||||||  ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  47832088 gtgatctttgtcggacgagttgatgtgagttgatcttggaggttagaaactaagttatttatcttgttgttgttgtttcagtaagcctgaattgtataat 47831989  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| |||| || ||||||||||||||||||||||||    
T  47831988 ctaatgttgtcgctaatgttatataattgtatatacat 47831951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 68225 - 67887
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  68225 ttttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaataattt 68126  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | |||  || || ||| ||||  |  |||||||||||| ||||||||||||| ||           |  ||||| ||| |||||||||||||||||||||    
T  68125 aagaacaaacttgtgggagttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaat 68026  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
    |||||| ||||||||||| ||||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||| ||||  ||| |    
T  68025 gcgatccttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtgagcctgaattaatatga 67926  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| ||||||  ||||||||||||||||||||||||    
T  67925 tctaatgttgttgttaatgttatataattgtatatacat 67887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 810771 - 811108
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat-agtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| || |||||||||||||||||||||||||||| | |||||||||||||||  | ||    
T  810771 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatt 810870  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaa 198  Q
    ||| ||||||||||||  |  || ||||||||||||||| ||||||||||||| ||          |  |   || ||| ||||||||||||| ||||||    
T  810871 tag-aatgaatttttgtgaactgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagtacttatgttacaaaatgccttgtttaagttaaa 810969  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataa 298  Q
    ||||||||||||||| ||| ||||||  |||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||    
T  810970 tgcgatctttgtcgcgcaagttgatgtgagttgaccttggaagttagaaactaagttatttatcttgctgttgtagtttcagtaagcctgaattgtataa 811069  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  811070 tctaatgttgttgctaatgttatataattgtatatacat 811108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 337
Target Start/End: Complemental strand, 16056788 - 16056471
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtag 127  Q
    |||||| || ||||| || |||||| |||| ||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||| |||||||| |     
T  16056788 ctttaggtgattttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaa 16056689  T
Q  128 ttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaat 218  Q
    ||  ||||||||||||||||||||||||||||| ||          ||  ||||| ||| ||||||||||| |||||||||||||||||||| |||| |     
T  16056688 ttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgtt-aggttaaatgcgatctttgtagcacgag 16056590  T
Q  219 ttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgt 318  Q
    ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||| ||||||| |||||||| |||  ||||||||||| ||||||  |||||    
T  16056589 ttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgatgttgttgtttcggtaagcctgaatgatataatctaatgttgttgttaatgt 16056490  T
Q  319 tatataattgtatatacat 337  Q
    |||||||||||||||||||    
T  16056489 tatataattgtatatacat 16056471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 38 - 312
Target Start/End: Complemental strand, 16324456 - 16324174
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaacctga 137  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||  ||||  |   ||    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaatagtttaagaacgaatttttgagagttagattgga 16324357  T
Q  138 actcgccatagcgagtagaggctatc---tt------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctag 228  Q
    ||||||||| ||||||||||||  ||   ||      || ||||| ||| ||||||||||| |||||||||| |||| ||||||||  | ||||||  ||    
T  16324356 actcgccatggcgagtagaggccctcgccttgcgaactgcccagttacagaatgccttgtt-aggttaaatgtgatccttgtcgcatgagttgatgtgag 16324258  T
Q  229 ttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgc 312  Q
    |||||||| |||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  16324257 ttgatcttagaggttagaaactaagttgttgatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgc 16324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 44014653 - 44014318
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| |||   ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   |||    
T  44014653 ttttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 44014554  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
      ||||||||||||| |||||| ||||||||||||||| | ||||||||||| ||           |  || || ||| |||||||||||||||||||||    
T  44014553 tagaatgaatttttgttagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaaccggttacagaatgccttgtttaggttaaat 44014454  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
    |||||| ||||||||| | ||||||  ||||||||   ||||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||  ||| |    
T  44014453 gcgatcattgtcgcacgaattgatgtgagttgatc--agaggttaaaaactaagtt-gttatcttgctgttgttgtttcagtaagcctgaattaatatga 44014357  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| |||||   |||| ||||||| |||||||||||    
T  44014356 tctaatgttgtttttaatggtatataactgtatatacat 44014318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 38 - 337
Target Start/End: Complemental strand, 22073366 - 22073059
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaacctga 137  Q
    ||||||||||||||| |||| ||||||||||||| |||||||  ||| ||||||||||||| |||||||||| ||||| |||||||| ||||  ||||||    
T  22073366 ttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggagttacacctga 22073267  T
Q  138 actcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctag 228  Q
    ||||||||| ||||||||||||  ||          ||  ||||| ||| ||||| ||||| ||||||||||||||| ||||||||| | ||||||  ||    
T  22073266 actcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttgtt-aggttaaatgcgatccttgtcgcacgagttgatgtgag 22073168  T
Q  229 ttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattg 328  Q
    ||||||||  |||| || ||||||||| ||| ||||| |||| |||||||||||||||| |||| ||||||||||| ||||||  |||||||||||||||    
T  22073167 ttgatcttacaggtaaggaactaagttgtttgtcttgatgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgttatataattg 22073068  T
Q  329 tatatacat 337  Q
     ||||||||    
T  22073067 catatacat 22073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 18006120 - 18005789
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||| ||||||||      |||||||||||||  ||||||||    
T  18006120 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatt------tgagattgaacctaaaatagttt 18006027  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| ||| || ||| ||||  ||||||||||||||| |||| |||||||  ||          ||| | ||| ||| ||||||||||||||| ||| |    
T  18006026 aagaacgaacttgtgggagttatacctgaactcgccatggcgactagaggccctcgcctcgcgaattgactagttacaaaatgccttgtttaggataa-t 18005928  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
    |||||||||||||||||| |||||   |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| | ||  ||| |    
T  18005927 gcgatctttgtcgcacaagttgatatgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgatttaatatga 18005828  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| ||||||  |||| |||||||||||||||||||    
T  18005827 tctaatgttgttgttaatggtatataattgtatatacat 18005789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 9389337 - 9389674
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||||| || ||| | || |||| ||||||||| ||| |  ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9389337 ttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaatagttt 9389436  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| |||||| ||  ||||  | ||||||||||||| ||||||||||||| ||           |   |||| ||| ||||||||||||||||||||     
T  9389437 aagaacgaatttatgtgagttacagctgaactcgccatggcgagtagaggctctcgcctcgcgagctaagcagttacagaatgccttgtttaggttaaaa 9389536  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||||||||| ||| | ||||||  |||||||||||||||||||||||||||||||  | |||| |||| |  || ||||||||||  |||||||| |    
T  9389537 gcgatctttgtcacacgagttgatgtgagttgatcttggaggttagaaactaagttatcgaccttgatgttgtcattccagtaagcctggattgtatatt 9389636  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| ||  ||||||||||||||||||||||||    
T  9389637 ctaatattgatgataatgttatataattgtatatacat 9389674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 12255453 - 12255584
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||||||| |||||||||| |||| |||| |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| |||    
T  12255453 tttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaatttttgggagt 12255552  T
Q  129 tgaacctgaactcgccatagcgagtagaggct 160  Q
    |  |||||||||||||||||||||||||||||    
T  12255553 tacacctgaactcgccatagcgagtagaggct 12255584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 2279780 - 2279910
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||||||| ||||||||||||||| |||  |||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||| ||||||||  ||    
T  2279780 tttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatggatttttgggtgt 2279879  T
Q  129 tgaacctgaactcgccatagcgagtagaggc 159  Q
    |  ||||||||||||||||||||||||||||    
T  2279880 tacacctgaactcgccatagcgagtagaggc 2279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 12756359 - 12756509
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || ||| |||||||||||||||| || |||    
T  12756359 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-ttt 12756457  T
Q  109 aggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| ||||||| || || |||||||||| |||| |||||||||||||    
T  12756458 aagaatgaactttttggaagctg-acctgaactcaccatggcgagtagaggct 12756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 15754704 - 15754813
Alignment:
Q  175 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 274  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||||||||| |     
T  15754704 acataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaata 15754803  T
Q  275 tttcagtaag 284  Q
    || |||||||    
T  15754804 ttccagtaag 15754813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 38227959 - 38227866
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  38227959 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 38227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 15754528 - 15754622
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||  | ||| |||||||||||||||||    
T  15754528 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 15754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 16385900 - 16385994
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  16385900 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 16385994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 9509668 - 9509575
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  9509668 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 9509575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 17061602 - 17061694
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  17061602 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 17061694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 40443857 - 40443762
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  ||||||||||||||||||    
T  40443857 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaat 40443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 28504943 - 28505033
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  28504943 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 28505033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 3564006 - 3564099
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| |||   ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  3564006 ttttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 3564099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 12699311 - 12699218
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||| |||||||||||||    
T  12699311 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 12699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 15113243 - 15113140
Alignment:
Q  180 atgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttca 279  Q
    |||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||    
T  15113243 atgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttca 15113145  T
Q  280 gtaag 284  Q
    |||||    
T  15113144 gtaag 15113140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 27847485 - 27847580
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||| |||||||||||||| |  ||  ||||||||||||||||||    
T  27847485 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaat 27847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 15116781 - 15116677
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| | |||||||||||||    
T  15116781 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctactgttattgtttc 15116683  T
Q  279 agtaag 284  Q
    ||||||    
T  15116682 agtaag 15116677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 15143700 - 15143772
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  15143700 ttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaa 15143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 337
Target Start/End: Complemental strand, 12901620 - 12901468
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggt---ta-gaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||||| ||  ||||||| || | ||||||  ||||||||||||||||   || ||||||||||| ||||||||| |||| |||||||||||||    
T  12901620 ttaggttaaatgtgacatttgtcgtacgagttgatgtgagttgatcttggaggtacgtaggaaactaagttgtttatcttgttgttgttgtttcagtaag 12901521  T
Q  285 cctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    | | |||| ||| || |||| ||||||  ||||||||||| ||||||||||||    
T  12901520 cttgaattatatgatttaatgttgttgttaatgttatatagttgtatatacat 12901468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 39267283 - 39267381
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||||||| ||| | ||| |||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  39267283 tgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 39267381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 2831948 - 2832037
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||    
T  2831948 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 2832037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 9751192 - 9751285
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||| ||||||||||||    
T  9751192 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaa 9751285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 11995699 - 11995768
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaaga 77  Q
    ||||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11995699 tttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 14045281 - 14045188
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 14045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 14355311 - 14355218
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 14355218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 34201263 - 34201172
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||||||||| ||| | ||||||||||||||||| ||||| ||||||||||||||| | |||||| |  ||| ||||||||||||||    
T  34201263 tttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctg 34201172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 44116983 - 44116833
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||| ||||| ||| | ||| |||| ||||||| |||||| |||||||||||||||||||||||| || ||| |||||||||||| |||| || ||    
T  44116983 ttttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaa-agatt 44116885  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  44116884 tagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 44116833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 26212464 - 26212370
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| | |||||| |||| || ||  ||||||||||||||||||    
T  26212464 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctggaat 26212370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 1867650 - 1867743
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||| |||| ||||||||||||||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 1867743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 18302657 - 18302564
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||  ||||||||||||| |||||||||| | ||||||||||| || ||  |||||||||||||||||    
T  18302657 ttttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaa 18302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 21064825 - 21064955
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| || |||| ||||||| ||||  |||||||||||||||| |||  ||| ||||||||||| ||||||||| |  ||||| |||||||   |||    
T  21064825 ttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaacttggaatagtgtcagaatggatttttgagtgtt 21064924  T
Q  130 gaacctgaactcgccatagcgagtagaggct 160  Q
      |||| |||||||||| |||||||||||||    
T  21064925 ttaccttaactcgccatggcgagtagaggct 21064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 2529640 - 2529709
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||| |||||    
T  2529640 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctg 2529709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 11995850 - 11995954
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||||||||||||||||||||  | | ||||||  |||| ||||| ||||||||||||||| || |||| |||||||||| |||  |    
T  11995850 aatgcctt-tttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatcttagaggttagaaactaatttgtttaccttgctgttaatgtccc 11995948  T
Q  279 agtaag 284  Q
    ||||||    
T  11995949 agtaag 11995954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 14036731 - 14036638
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||||||||||||||||| | | ||||||  |||| ||||||||    
T  14036731 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 14036638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 14346761 - 14346668
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||||||||||||||||| | | ||||||  |||| ||||||||    
T  14346761 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 14346668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 28505121 - 28505225
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||| ||| | |||| |    
T  28505121 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgttgtcaatgttcc 28505219  T
Q  279 agtaag 284  Q
    ||||||    
T  28505220 agtaag 28505225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 34201088 - 34200980
Alignment:
Q  175 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 274  Q
    |||||||||||| ||||||||||||||||||  ||||   | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| ||    
T  34201088 acataatgcctt-tttaggttaaatgcgatccctgtcattcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatg 34200990  T
Q  275 tttcagtaag 284  Q
    |  |||||||    
T  34200989 tcccagtaag 34200980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 17017052 - 17017120
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  |||||||||||||||    
T  17017052 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17017120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 12901852 - 12901769
Alignment:
Q  41 tgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12901769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 9177250 - 9177318
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| ||| ||  |||||||||||||||    
T  9177250 ctttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 16092253 - 16092185
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| | | ||  |||||||||||||||    
T  16092253 ctttagatgattttgagtgcctgaatatgtataagaatgattaggtaggtttttagattgagattgaac 16092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 2760604 - 2760542
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  2760604 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 2760542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 3272264 - 3272202
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  3272264 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 3272202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17137698 - 17137768
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  17137698 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattag 17137768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10508717 - 10508786
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| ||||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  10508717 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 10508786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 9751370 - 9751406
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9751370 aatgccttgtttagtttaaatgcgatctttgtcgcac 9751406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 15008105 - 15008177
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||||| || |||||||||||| |||| |||||||||||||  ||  ||  |||||||||||||||||||    
T  15008105 ctttagatgattctgagtgcctgaacatgtataataatgattagacaattttttagattgagattgaacctgg 15008177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 39267466 - 39267502
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||| ||||||||||||||    
T  39267466 aatgccttgtttaggttaaatgtgatctttgtcgcac 39267502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 11768525 - 11768592
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||| ||| ||  ||||||| |||||||    
T  11768525 tttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 11768592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 9032929 - 9032966
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataat 65  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  9032929 ctttagatgattttgagtgcctgaatatgtataataat 9032966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 11880729 - 11880668
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| |||||||||||| || |||| || |||||||||    
T  11880729 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 11880668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 12187490 - 12187429
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  12187490 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 12187429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 24054945 - 24054884
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  24054945 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 24054884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 2529873 - 2529909
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    ||||||||  |||||||||||||||||||||||||||    
T  2529873 aatgccttaattaggttaaatgcgatctttgtcgcac 2529909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9703751 - 9703703
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  9703751 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 9703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12318587 - 12318543
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  12318587 ttctgagtttttgacttttgagttgaacattagatgcttttgagt 12318543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13462221 - 13462177
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  13462221 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 13462177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15581152 - 15581108
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  15581152 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 15581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 161; Significance: 8e-86; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 5785 - 6100
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| |||||||| |||||| |||| ||||||||||||||||| |||| |||||||||||||||| | ||||||||| | ||| |||||  | | ||    
T  5785 ttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaaccagtaatagtttaaggatggattttgtg-attt 5883  T
Q  130 gaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaattt 220  Q
    | ||||||||||||| ||||||||||||||  ||          ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||    
T  5884 gcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtttaggttaaatgcgatctttgtcgcgcaagtt 5983  T
Q  221 gatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgtta 320  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  5984 gatgttagttgatcttggaggttaaaaactaagttatttatcttgctgttattgtttcagtaagcctgaattgtataatctaatgttgttgctaatgtta 6083  T
Q  321 tataattgtatatacat 337  Q
    |||||||||||||||||    
T  6084 tataattgtatatacat 6100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 22921509 - 22921847
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| |||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22921509 ttttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaatagttt 22921608  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| |||||||||  ||||  || |||||||||||| ||||||||||||| ||           || | ||| ||| |||||||||||| ||||||||    
T  22921609 aagaacgaatttttgagagttagacttgaactcgccatggcgagtagaggctctcgcctcgcgaactgcctagttacagaatgccttgtttgggttaaat 22921708  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
    |||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| |    
T  22921709 gcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatga 22921808  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| ||||||  ||||||||||||||||||||||||    
T  22921809 tctaatgttgttgttaatgttatataattgtatatacat 22921847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 52927623 - 52927906
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||   |||    
T  52927623 ttttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattt 52927722  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
     |||||||||||||   ||||  ||||||||||||||| ||||||||||||  ||          ||| ||||| ||| ||||||||| |||||||||||    
T  52927723 tggaatgaattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttg-ttaggttaaat 52927821  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||    
T  52927822 gcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctattgttgttccagtaag 52927906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 33 - 337
Target Start/End: Original strand, 35981352 - 35981665
Alignment:
Q  33 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaa 132  Q
    |||| |||||||||||||||  ||| | || ||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||||| ||  ||||| |    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgggatagtttaagaacgaatttatgtgagttgca 35981451  T
Q  133 cctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgat 223  Q
    |||||||||||||| | ||||||||||| ||           |  | ||| ||| |||||||||||||||||||| |||||||||||||||| | |||||    
T  35981452 cctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgaattgat 35981551  T
Q  224 gctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatat 323  Q
    |  ||||||||||||||||||||||||||||||||||||||| |||| |  || ||||||||||  |||||||| |||||| ||| ||  ||||||||||    
T  35981552 gtgagttgatcttggaggttagaaactaagttatttatcttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataatgttatat 35981651  T
Q  324 aattgtatatacat 337  Q
    ||||| ||||||||    
T  35981652 aattgcatatacat 35981665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 38 - 337
Target Start/End: Complemental strand, 20637300 - 20636992
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaacctga 137  Q
    ||||||||||||  |  ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||  ||||| ||||||    
T  20637300 ttttgagtgcctagacttgtataatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaatttttgtgagttgcacctga 20637201  T
Q  138 actcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctag 228  Q
    ||||||||| ||||||||||||| ||           |   |||| ||| |||| ||||||||||||||| |||||||||||||||  | ||||||  ||    
T  20637200 actcgccatggcgagtagaggctctcgcctcgcgagctaatcagttacagaatgtcttgtttaggttaaaagcgatctttgtcgcatgagttgatgtgag 20637101  T
Q  229 ttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattg 328  Q
    |||||||||||||||||||||||||||||||| |||| |||| |  || |||||||||| ||||||||  | |||| ||| ||  |||||||||||||||    
T  20637100 ttgatcttggaggttagaaactaagttatttaccttgatgttgtcattccagtaagcctgaattgtattttttaatgttgatgataatgttatataattg 20637001  T
Q  329 tatatacat 337  Q
    |||||||||    
T  20637000 tatatacat 20636992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 9 - 276
Target Start/End: Complemental strand, 33681488 - 33681212
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||    
T  33681488 ttttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 33681389  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
      |||||||||||||  ||||| ||||||||||||||| ||||| ||||||| ||          ||  ||||| ||| | ||||||| ||| |||||||    
T  33681388 tagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttgcttatgttaaat 33681289  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 276  Q
    |||||||||||| ||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| |||||    
T  33681288 gcgatctttgtcacacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgtt 33681212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 20248756 - 20248481
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtt 107  Q
    |||||||||||||| ||| |  |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| | | ||    
T  20248756 ttttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactt 20248657  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    || |||||||||||||  |  |||||||||||||||||| ||||||||||||||||           |  | ||| ||| |||||||| |||||||||||    
T  20248656 ta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctatcgcctcgcgagctaactagttacagaatgccttatttaggttaaa 20248558  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgt 275  Q
    ||||||  ||||||||||| ||||||  | |||||||| |||||||||||||||||||||||||||| |||| ||||    
T  20248557 tgcgattcttgtcgcacaagttgatgtaaattgatcttagaggttagaaactaagttatttatcttgatgttgttgt 20248481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 22238108 - 22237841
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||   |||    
T  22238108 ttttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattt 22238009  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
     |||||||| |||||  ||||| || |||||||||||| ||||||||||||  ||          ||| | ||| ||| |||||||||||||||||||||    
T  22238008 tggaatgaa-ttttgtgagttgcacttgaactcgccatggcgagtagaggccctcgcctcgcgaattgactagttacagaatgccttgtttaggttaaat 22237910  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 268  Q
    ||||||||| |||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||    
T  22237909 gcgatctttttcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctg 22237841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 169 - 337
Target Start/End: Complemental strand, 49261651 - 49261483
Alignment:
Q  169 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 268  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||| |||| ||    
T  49261651 ccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatg 49261552  T
Q  269 ttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    || |  || |||||||||  ||||||||| |||||| ||| ||  ||||||||||||||||||||||||    
T  49261551 ttgtccttccagtaagccggaattgtatattctaatgttgatgataatgttatataattgtatatacat 49261483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 284
Target Start/End: Complemental strand, 21754515 - 21754232
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct-ggaatagt 106  Q
    ||||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| |||| | |    
T  21754515 tttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagact 21754416  T
Q  107 ttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc-tttgtccag--------tcacataatgccttgtttaggttaa 197  Q
    ||| ||||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||   |  | ||        | ||| | ||||||| |||||||||    
T  21754415 tta-gaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgttttacagactgccttg-ttaggttaa 21754319  T
Q  198 atgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||| |||| ||||||||| | ||||||  |||||||||  |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  21754318 atgtgatccttgtcgcacgagttgatgtgagttgatctcagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 21754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 28194114 - 28194241
Alignment:
Q  33 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaa 132  Q
    |||| |||||||||||||||  ||| | || ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| ||||  ||||| |    
T  28194114 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatctttgtgagttgca 28194213  T
Q  133 cctgaactcgccatagcgagtagaggct 160  Q
    |||||||||||||| || ||||||||||    
T  28194214 cctgaactcgccatggcaagtagaggct 28194241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21162215 - 21162117
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| |||| ||||||| || ||| ||||||||||||||    
T  21162215 ttctgtgtttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 22355827 - 22355921
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  22355827 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22355921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 22357513 - 22357607
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  22357513 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22357607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 433486 - 433335
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| ||||||| |||||||||||||||| || ||| |||||||||||||||||   |||    
T  433486 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattt 433387  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  433386 tagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 433335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 21861389 - 21861546
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| |||||||||| ||  |||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||| || |||||||    
T  21861389 aatgccttgtt-aggttaaatgtgacatttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctattgttgtttc 21861487  T
Q  279 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| |||  ||| || | || |||||   ||||| ||||||||||||||||||    
T  21861488 agtaagcctgaatattatgatatgatgttgtttataatgtgatataattgtatatacat 21861546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 12271848 - 12271744
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| |||||||||||||||    
T  12271848 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttc 12271750  T
Q  279 agtaag 284  Q
    ||||||    
T  12271749 agtaag 12271744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 22532748 - 22532655
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22532748 ttttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 34510259 - 34510166
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| |||   ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  34510259 ttttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 34510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 27250384 - 27250476
Alignment:
Q  11 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  || |||||||||||||||    
T  27250384 ttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctggaat 27250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 43697839 - 43697727
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||||| || ||| | ||||||| ||||||||||||||| ||||||| | |||||||| |||||||  ||||||||||| |||||||||||||||    
T  43697839 ttttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctggaatagttt 43697740  T
Q  109 aggaatgaatttt 121  Q
    | ||||| |||||    
T  43697739 aagaatggatttt 43697727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 38801043 - 38801138
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| |||||||||  |||||||||||||| |||||||||||||||||||||||| || ||  || |||||||||||||||    
T  38801043 tttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaat 38801138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 20846872 - 20846966
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||| |||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||| |||| || ||  ||||||||||||||||||    
T  20846872 ttttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 20846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 20919080 - 20918990
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||| |||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  20919080 ttttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 20918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 50209851 - 50209948
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||||||| ||| ||| | |||| |||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  50209851 tgtgattttgacttttgagttgatctt-atatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 50209948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 21027148 - 21027054
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||| |||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||| |||| || ||  ||||||||||||||||||    
T  21027148 ttttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 21027054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 16367871 - 16367952
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||||||||| ||||||||||| ||||||    
T  16367871 ctttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaaaagttta 16367952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 20135666 - 20135573
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| | | | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  20135666 ttttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 20135573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 21301180 - 21301245
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaa 74  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  21301180 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 21896078 - 21896232
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| || || |||||||||||| |||||||   |||| |||||||    
T  21896078 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagatgtaagaaactaagttgtttatct---tgttgttgtttc 21896173  T
Q  279 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| |||  ||| || | || |||||   ||||| ||||||||||||||||||    
T  21896174 agtaagcctgaatattatgatttgatgttgtttataatgtgatataattgtatatacat 21896232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 16368115 - 16368259
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| | | ||| ||||| |||||| |||||||| ||||| ||||||||||||||||     
T  16368115 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcataggggtaagaaattaagttgtttatcttactgttgttgtttcagtaagcctg 16368214  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| || | || |||||   ||||| |||||| |||||||    
T  16368215 aattatatgatttgatgttgttaataatgtgatataaatgtatat 16368259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 50687127 - 50687032
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||| || ||||||||||||| |||||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  50687127 tttagctgattttgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 50687032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 16093478 - 16093556
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtt 107  Q
    |||||||| ||||||||||||| |||||| ||||||||||| || ||| ||  ||||||||||||||||||||| ||||    
T  16093478 tttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaaaagtt 16093556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 20918902 - 20918798
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||  |||| |||| ||||| |||| |    
T  20918902 aatgcctt-tttaggttgaatgcgatctttgtcgttcgacttgatgtgagttgatcttagaggttagaaactaagtcgtttaccttgttgttaatgttcc 20918804  T
Q  279 agtaag 284  Q
    ||||||    
T  20918803 agtaag 20918798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 21895893 - 21895974
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||||| || |||||||||||| | || |||||||||||||||||| ||  ||||||||||||||||||| | ||||||    
T  21895893 ctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgggaaagttta 21895974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 22354209 - 22354306
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    |||| |||||||||||||| ||| | ||| |||||||||||||| |||| |||||| ||||||||||||||| |  | ||  ||||||||||||||||    
T  22354209 tgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctgga 22354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 26065454 - 26065358
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| |  |||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  26065454 ctttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 26065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 27652806 - 27652874
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||  |||||||||||||| ||| ||  |||||||||||||||    
T  27652806 ctttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaac 27652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 35260716 - 35260812
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||  | ||||||  |||| ||||||||    
T  35260716 ctttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 35260812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 50613706 - 50613794
Alignment:
Q  33 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttt 121  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||  ||||||||||    
T  50613706 gatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50613794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 50621534 - 50621622
Alignment:
Q  33 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttt 121  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||  ||||||||||    
T  50621534 gatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50621622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 333
Target Start/End: Complemental strand, 50686905 - 50686761
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    ||||| |||||| || ||||||||||| | |||| |  |||||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  50686905 ttaggataaatgtgacctttgtcgcacgagttgacgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 50686806  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| |||  || |||||   ||||| |||||| |||||||    
T  50686805 aattatatgatccgatgttgttaataatgtgatataaatgtatat 50686761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 21861155 - 21861250
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    ||||||||| || |||||||||||| | || |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| |||||||    
T  21861155 ctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttg 21861250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 48521103 - 48521036
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||| |||||||| ||||||||||| |||||||||||||| ||| ||  |||||||||||||||    
T  48521103 tttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaac 48521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 21342606 - 21342536
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||||||||| |||||||||    
T  21342606 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctgg 21342536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 21347471 - 21347401
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||||||||| |||||||||    
T  21347471 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctgg 21347401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 41049631 - 41049725
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||| || |||||||||||| |||| |||||||| ||||| ||| ||  ||||||||||||||||||| | |||||   |||||||||||||    
T  41049631 ttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgggaaagtttgaaaatgaatttttgg 41049725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 18181763 - 18181826
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||||||||||    
T  18181763 tttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgattag 18181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 16759184 - 16759115
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||| |||||||||||| || | || |||||||||||||| ||| ||  ||||||||||||||||||    
T  16759184 ttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctg 16759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 20091115 - 20091180
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattagga 73  Q
    ||||||||||||||| | | | |||||||| ||||| |||||||| |||||||||| |||||||||    
T  20091115 tttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattagga 20091180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 21533479 - 21533552
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggag-attgagattgaacctgg 100  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  || ||||| |||||||||||    
T  21533479 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagaattgaaattgaacctgg 21533552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 22432426 - 22432488
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  22432426 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattag 22432488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22831013 - 22831083
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  22831013 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 22831083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 21683534 - 21683469
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattg 93  Q
    ||||||||| |||||||||||||||||||| ||| ||||| |||| ||| ||  ||||||| ||||    
T  21683534 ctttagatgattttgagtgcctgaatatgtataagaatgactaggcaagtttttagattgaaattg 21683469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21787677 - 21787746
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| |||||||||| |||| ||| | ||||||| |||||||||||| || |||| |||||| |||||    
T  21787677 ttctgtatttttgacttgtgagttgaaccttagatgtttttgagtgcctaaagatgtttaataaagatta 21787746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 22468339 - 22468400
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  22468339 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 22468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42864846 - 42864915
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||| ||  ||| || |||||||||    
T  42864846 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagttgtttattaatgatta 42864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20228455 - 20228499
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  20228455 ttctgagtttttgacttttgagatgaaccttagatgcctttgagt 20228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 28194265 - 28194305
Alignment:
Q  175 acataatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    ||| |||| ||||||||||||| ||||||||||||||||||    
T  28194265 acaaaatgtcttgtttaggttacatgcgatctttgtcgcac 28194305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 52940462 - 52940506
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  52940462 ctttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 691 - 1011
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattg------gagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||||||      ||||||||||||||||||| ||||||||| | ||| |||||      
T  691 ttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattgagattgaacctgtaatagtttaaggatggattttgt 790  T
Q  124 gtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgca 214  Q
    | ||||| ||||||||||||| ||||||||||||||  ||          ||  ||||| |||||||||||||||||||||||||||||||||||||||     
T  791 g-agttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtttaggttaaatgcgatctttgtcgcg 889  T
Q  215 caatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcga 314  Q
    ||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||| ||||||| |    
T  890 caagttgatgttagttgatcttggaagttagaaactaagttatttatcttgttgttgttgtttcagtaagcctgaattgta-aatctaatgttgttgcta 988  T
Q  315 atgttatataattgtatatacat 337  Q
    |||||||||||||||||||||||    
T  989 atgttatataattgtatatacat 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 23019865 - 23019550
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  23019865 ttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaatattttaagaatgaatttttgggagtt 23019766  T
Q  130 gaacctgaactcgccatagcgagtagaggctat---ct------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaattt 220  Q
      ||||||||||||||| ||||||||||||  |   ||      ||||||| | ||| ||||| ||| |||||||||||||||||||||||| || | ||    
T  23019765 acacctgaactcgccatggcgagtagaggcccttgcctcgcgagttgtccaattacaaaatgc-ttggttaggttaaatgcgatctttgtcgaacgagtt 23019667  T
Q  221 gatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgtta 320  Q
    ||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||||||||||| | ||||  |||||||    
T  23019666 gatgtgagttgatcttggaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaactatataatctaatgtcgttgttaatgtta 23019567  T
Q  321 tataattgtatatacat 337  Q
    |||||||||||||||||    
T  23019566 tataattgtatatacat 23019550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 19652674 - 19652390
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtt 107  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| || | ||    
T  19652674 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactt 19652575  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    || |||||||||||||  | ||| ||||||||||||||| ||||||||||||| ||           |  | ||| ||| ||| ||||||||||| ||||    
T  19652574 ta-gaatgaatttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgggctaactagttacaaaataccttgtttaggataaa 19652476  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  19652475 tgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttattgttccagtaag 19652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 22080400 - 22080717
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| ||||||||| ||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||| ||| || ||| ||||    
T  22080400 ttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacgaacttatgggagtt 22080499  T
Q  130 gaacctgaactcgccatagcgagtagaggctatc------------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaa 217  Q
      ||||||||||||||| ||||||||||||| ||            | ||||   | ||| ||  |||||||||||   ||||||||| ||||||||| |    
T  22080500 atacctgaactcgccatggcgagtagaggctctcgcctcgcgagcttgtgtc---tgacagaacaccttgtttaggaataatgcgatccttgtcgcacga 22080596  T
Q  218 tttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattg-tataatctaatattgttgcgaat 316  Q
     ||||||  |||||||||| ||||||||||||||||||  |||||||||| || |||||||||||||||||||||| ||| | |||||  |||||  |||    
T  22080597 gttgatgtgagttgatcttagaggttagaaactaagttgcttatcttgctcttgttgtttcagtaagcctaaattgatatgacctaatgatgttgttaat 22080696  T
Q  317 gttatataattgtatatacat 337  Q
    ||||||||| |||||||||||    
T  22080697 gttatataaatgtatatacat 22080717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4667847 - 4668006
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || ||| |||||||| ||||||    
T  4667847 ttctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctgg 4667946  T
Q  101 -aatagtttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
     || |||||| |||||||||||||  |  |||||||||||||||||| |||||||||||||    
T  4667947 aaagagttta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggct 4668006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 311
Target Start/End: Original strand, 27332926 - 27333236
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||||||||||||| ||||| |||| |||| ||||||||||||||||  ||| |||| ||||||||||||   |||    
T  27332926 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27333025  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
      ||||||| |||||  ||||| ||||||||||||||| ||||||||||||| ||           || ||| | ||| ||||| ||||| |||||||||    
T  27333026 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgtt-aggttaaat 27333124  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    | |||| ||||||||| | ||||||  |||||||||| ||||||||||||||| || ||||||||| ||||  ||||||||||||||| |||||||||||    
T  27333125 gtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaaattgtttatcttgatgttgctgtttcagtaagcctgaattgtataat 27333224  T
Q  300 ctaatattgttg 311  Q
    | ||| ||||||    
T  27333225 ccaatgttgttg 27333236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 311
Target Start/End: Original strand, 27393666 - 27393976
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||||||||||||| ||||| |||| |||| ||||||||||||||||  ||| |||| ||||||||||||   |||    
T  27393666 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27393765  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
      ||||||| |||||  ||||| ||||||||||||||| ||||||||||||| ||           || ||| | ||| ||||| ||||| |||||||||    
T  27393766 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgtt-aggttaaat 27393864  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    | |||| ||||||||| | ||||||  |||||||||| ||||||||||||||| || ||||||||| ||||  ||||||||||||||| |||||||||||    
T  27393865 gtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaaattgtttatcttgatgttgctgtttcagtaagcctgaattgtataat 27393964  T
Q  300 ctaatattgttg 311  Q
    | ||| ||||||    
T  27393965 ccaatgttgttg 27393976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4185457 - 4185616
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||| ||||| |||||| || ||| |||||||||||||||    
T  4185457 ttctgtgtttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctgg 4185556  T
Q  101 -aatagtttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
     || |||||| |||||||||||||  |  |||||||||||||||||| |||||||||||||    
T  4185557 aaagagttta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggct 4185616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4674694 - 4674853
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || ||| |||||||| ||||||    
T  4674694 ttctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctgg 4674793  T
Q  101 -aatagtttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
     || |||||| |||||||||||||  |  ||||||| |||||| ||| |||||||||||||    
T  4674794 aaagagttta-gaatgaatttttgtgaactgaaccttaactcgtcatggcgagtagaggct 4674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4189443 - 4189284
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || ||| |||||||| ||||||    
T  4189443 ttctgtgttttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctgg 4189344  T
Q  101 -aatagtttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
     || |||||| |||||||||||||  |  ||||||| |||||| ||| |||||||||||||    
T  4189343 aaagagttta-gaatgaatttttgtgaactgaacctaaactcgtcatggcgagtagaggct 4189284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 29808525 - 29808809
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtt 107  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||| ||||||||||||||| || | ||    
T  29808525 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagattt 29808624  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    |  |||||||  ||||| | |   ||||||||||||||| ||||| ||||||| ||          |  |   || ||| ||||||||||||||||| ||    
T  29808625 ttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggtt-aa 29808723  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||| |||||||||| |||| |||||||    
T  29808724 tgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttccagtaag 29808809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 1561607 - 1561498
Alignment:
Q  175 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 274  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||||||||| |     
T  1561607 acataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaata 1561508  T
Q  275 tttcagtaag 284  Q
    || |||||||    
T  1561507 ttccagtaag 1561498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31155032 - 31155133
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||| || ||| |||||||||||||||    
T  31155032 ttctgtttttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctgg 31155131  T
Q  101 aa 102  Q
    ||    
T  31155132 aa 31155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 28496115 - 28496398
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||| ||||||||||||||||| ||  |    
T  28496115 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa-agact 28496213  T
Q  109 aggaatg-aatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
      ||||| || |||||  | |   ||||||||||||||| ||||| ||||||| ||          |  |   || ||| ||||||||||||||||| ||    
T  28496214 tagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggtt-aa 28496312  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||| |||||||||| |||| |||||||    
T  28496313 tgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttccagtaag 28496398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 18457193 - 18457043
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || ||| |||||||||||||||| ||  ||    
T  18457193 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-att 18457095  T
Q  109 aggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| ||||||| || || ||||||||| ||||| |||||||||||||    
T  18457094 aagaatgaactttttggaagctg-acctgaactagccatggcgagtagaggct 18457043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 337
Target Start/End: Complemental strand, 19668664 - 19668516
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| ||     
T  19668664 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgctgttgttgtttcagtaagtctg 19668565  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |  | ||| || || | ||||||  ||||||||||| ||||||||||||    
T  19668564 atgtatatgatgtagtgttgttgataatgttatatagttgtatatacat 19668516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 1561783 - 1561689
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||  | ||| |||||||||||||||||    
T  1561783 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 1561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 19303183 - 19303273
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  19303183 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 19303273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 20637936 - 20638030
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20637936 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20638030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 25644801 - 25644651
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| |||||||||||||   |||| |||   |||||||||||||||  |||||||||||||||||| ||||||||    
T  25644801 ttttgacctttaagttgaaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacctgaaatagttt 25644702  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggc 159  Q
    | ||||| |||||||| ||||  ||| ||||||||||||||||||||||||    
T  25644701 aagaatggatttttgggagttacacccgaactcgccatagcgagtagaggc 25644651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 22779869 - 22779962
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22779869 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22779962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 20360609 - 20360707
Alignment:
Q  5 gtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| || ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20360609 gtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 17287438 - 17287531
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  || ||||| ||||||||    
T  17287438 ttttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaa 17287531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16920285 - 16920380
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||| || ||  | |||||| |||||||||    
T  16920285 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctggaat 16920380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 25956263 - 25956414
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||||| || |||   ||||||  ||||||||||||||| ||||||||| | |||| | |||||||  ||||||||||| |||||||||||||||    
T  25956263 ttttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctggaatagttt 25956362  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||| |||||| | ||||  ||||| | ||||||| |||||||||||||    
T  25956363 aagaatggattttttggagttacacctgtattcgccatggcgagtagaggct 25956414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 18821472 - 18821566
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || ||  ||||||||||||||||||    
T  18821472 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaat 18821566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 18409469 - 18409562
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||| |||||| ||| | |||||||||||||||||||| || ||||||| |||||||||||||||| || ||| |||||||||||||||||    
T  18409469 ttttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 18409562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 29061015 - 29060926
Alignment:
Q  13 gacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||||| || || ||  |||||||||||||||||    
T  29061015 gacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaa 29060926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 9098370 - 9098457
Alignment:
Q  205 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt 292  Q
    ||||||||||| | ||||||  |||||||||| ||||| ||||||||| || |||||||||| |||||||||||||||||||| ||||    
T  9098370 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaatttgtttatcttgcagttattgtttcagtaagcctgaatt 9098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 25611365 - 25611458
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| ||||||||||||||||||||  || || ||  |||||||| ||||||||    
T  25611365 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaa 25611458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 35008442 - 35008344
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    ||||| |||||| || |||||| |||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||||||||||||||||||||    
T  35008442 ttaggataaatgtgacctttgttgcacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttattgtttcagtaagcct 35008344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 21939862 - 21939769
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||  ||||||||||||| |||| ||||| ||||||||||||| || ||  ||||||||| |||||||    
T  21939862 ttttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaa 21939769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 15894072 - 15894136
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattagga 73  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||||||    
T  15894072 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattagga 15894136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 33443581 - 33443517
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagatt 92  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||||||  |||||||||||    
T  33443581 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagattttagattgagatt 33443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 22334525 - 22334588
Alignment:
Q  10 tttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattagga 73  Q
    ||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||||||    
T  22334525 tttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattagga 22334588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 19023908 - 19023838
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||| ||| | |||||||||||||| |||||||||||||| ||| ||  ||||||||||||||||||    
T  19023908 tttagatgatttcgggtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 19023838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 20109675 - 20109605
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  |||||||||||||||||    
T  20109675 ctttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 20594252 - 20594159
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| ||||||||| ||| | ||||||| |||||||||||| || ||||||||  ||||||||| |||| || ||  |||||||||||||||||    
T  20594252 tttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaa 20594159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 17106248 - 17106180
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  17106248 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagactgagattgaac 17106180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 20109417 - 20109354
Alignment:
Q  205 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 268  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||||    
T  20109417 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctg 20109354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 22831971 - 22831908
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    ||||||||||||||| ||| | |||||||||||||||||  |||| |||||||||| |||||||    
T  22831971 tttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattag 22831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 18697013 - 18696955
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||| ||||    
T  18697013 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatggaac 18696955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21834525 - 21834595
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  21834525 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaaaatgtttattaaagattag 21834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 11185969 - 11185876
Alignment:
Q  10 tttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||| ||||||| ||| | |||||||| |||||||||||||| ||||| |||| |||||||  |||| || ||   |||||||||||||||||    
T  11185969 tttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctggaat 11185876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 25628997 - 25629090
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||| || ||| | ||||||| | || || |||| || || |||| |||||||||||||| |||| ||| |||||||||||||||||    
T  25628997 ttttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaa 25629090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 20224480 - 20224412
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||  ||| |||||||||| ||| ||  |||||||||||||||    
T  20224480 ctttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 20224412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 22118464 - 22118396
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||| |||  ||| |||||||||| ||| ||  |||||||||||||||    
T  22118464 ctttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 22118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 23527711 - 23527779
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||| |||||| ||| |||||||||| ||| ||  ||||||| |||||||    
T  23527711 ctttagatggttttgagtgcctggatatgtataagaatgattaggcaagtttttagattgaaattgaac 23527779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 23539454 - 23539386
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||| ||||| ||| ||  ||| |||||||||||    
T  23539454 ctttagatggttttgagtgcctgaatatgtataagaatggttaggcaagtttttagactgagattgaac 23539386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 18199019 - 18199065
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaa 74  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  18199019 ctttagatggttttgagtgcctgaatgtgtataagaatgattaggaa 18199065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 18706764 - 18706706
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||| |||||||||||||| ||| ||  |||||||||| ||||    
T  18706764 ttttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagatggaac 18706706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21739657 - 21739727
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  21739657 ttctgtttttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttactaaagattag 21739727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 23077024 - 23076926
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    ||||| |||||| || |||||| |||  | ||||||  |||||||| ||| ||| ||||||||| ||  ||||||| ||||| ||||||||||||||||    
T  23077024 ttaggataaatgtgacctttgttgcatgagttgatgtgagttgatcatgggggtaagaaactaatttgcttatcttactgttgttgtttcagtaagcct 23076926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 25603057 - 25603091
Alignment:
Q  39 tttgagtgcctgaatatgtctaataatgattagga 73  Q
    |||||||||||||| ||||||||||||||||||||    
T  25603057 tttgagtgcctgaacatgtctaataatgattagga 25603091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 19863456 - 19863395
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  19863456 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 19863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 9098110 - 9098206
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || |||||||||||| |  | |||||||||||||  ||| ||  ||||||| ||||||||||| | ||||||  |||| ||||||||    
T  9098110 ctttagatgattctgagtgcctgaacagatataataatgattagacaagtttctagattgatattgaacctgggaaagtttaaaaatggatttttgg 9098206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 18204616 - 18204572
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||||    
T  18204616 ctttagatggttttgagtgcctgaatgtgtataagaatgattagg 18204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 19362960 - 19362892
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||  |||||||| | |||||||||||  ||| ||  |||||||||||||||    
T  19362960 ctttagatgtttttgagtgctggaatatgtattataatgattagacaagtttttagattgagattgaac 19362892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22429676 - 22429724
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    ||||| |||||||||||||||| ||| | |||||||||| |||||||||    
T  22429676 ttctgagtttttgacttttgagttgaaccttagatgcttctgagtgcct 22429724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 22439278 - 22439230
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgt 57  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||    
T  22439278 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 35008686 - 35008618
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||| |||||||||| |||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  35008686 ctttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaac 35008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 7e-77; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 38854893 - 38855229
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  38854893 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctggaatagttt 38854992  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| |||||||  | ||||  ||||||||||||||| ||||||||||||  ||          ||| ||||| ||| ||||||||| ||||||||||     
T  38854993 aagaacgaattttgag-agttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaatgccttgcttaggttaaac 38855091  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
     ||||||||||||||| | ||||||  | |||||||||||  |||| ||||||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  38855092 acgatctttgtcgcacgagttgatgtgaattgatcttggacattaggaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattgtataat 38855191  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  38855192 ctaatgttgttgctaatgttatataattgtatatacat 38855229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 6520847 - 6520511
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||| ||||||||    
T  6520847 ttttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctgaaatagttt 6520748  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||||| |||||||  ||||  ||||||| ||||||| ||||||||||||  ||           || ||| | ||| ||||| ||||| |||||||||    
T  6520747 aagaatggatttttgagagttagacctgaattcgccatggcgagtagaggccctcgcctcgcaaactgcccaattacagaatgctttgtt-aggttaaat 6520649  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    ||||||||||| |||  | ||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  6520648 gcgatctttgttgcatgagttgatgtgagttgatcttggaggttagaaactaagttatttatcttgctgttgttgtttcagtaagcctgaattgtataat 6520549  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  6520548 ctaatgttgttgctaatgttatataattgtatatacat 6520511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 21674184 - 21673847
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | || || | ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   |||    
T  21674184 ttttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 21674085  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
      |||||||| ||||  ||||| ||||||||||||||| ||||||||||||  ||          ||| |  || ||| ||||||||||||||| |||||    
T  21674084 tagaatgaatatttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgacttgttacagaatgccttgtttaggataaat 21673985  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
    |||||||||||||||||| || |||  ||||||| || ||||||| ||||||||||  |||||||| |||| |||||||||||||| | ||||  ||| |    
T  21673984 gcgatctttgtcgcacaagttaatgtgagttgatattagaggttaaaaactaagtt-gttatcttgttgttgttgtttcagtaagcttgaattaatatga 21673886  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| ||||||  |||| |||||||||||||||||||    
T  21673885 tctaatgttgttgttaatggtatataattgtatatacat 21673847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 276
Target Start/End: Original strand, 26355340 - 26355616
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtt 107  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| || | ||    
T  26355340 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactt 26355439  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    || |||||||||||||  | ||| ||||||||| ||||| ||||||||||||| ||           |  | ||| ||| ||||||||||||| ||||||    
T  26355440 ta-gaatgaatttttgtgaattgtacctgaacttgccatggcgagtagaggctctcgcctcacgagctaactagttacagaatgccttgtttatgttaaa 26355538  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 276  Q
    ||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||| ||||||||  ||||||||||    
T  26355539 tgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatctttttgttattgtt 26355616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 23760482 - 23760822
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| |  |  ||| |||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  23760482 ttttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaatagttt 23760581  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| ||| || ||| ||||  ||||||||| ||||  ||||||||||||  ||          ||| | ||| ||| ||||||||| ||||| |||||    
T  23760582 aagaacgaacttgtgggagttatacctgaacttgccaaggcgagtagaggccctcgcctcgcgaattgactagttacaaaatgccttg-ttaggataaat 23760680  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttattta---tcttgctgttattgtttcagtaagcctaaat-tgta 295  Q
    |||||||||||||||||| ||||||  |||||||||| ||||||| |||||||||| ||||   | ||| |||| |||||||||||||||| |||   ||    
T  23760681 gcgatctttgtcgcacaagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgttgttgttgttgtttcagtaagcctgaataaata 23760780  T
Q  296 taatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    | ||||||| ||||||  |||| |||||||||||||||||||    
T  23760781 tgatctaatgttgttgttaatggtatataattgtatatacat 23760822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 97 - 337
Target Start/End: Complemental strand, 21285989 - 21285741
Alignment:
Q  97 ctggaatagtttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttg 187  Q
    ||||||||||||| |||||||||||||| ||||  |||||||||||| || ||||||||||||  ||          ||| ||||| ||| ||||| |||    
T  21285989 ctggaatagtttaagaatgaatttttgggagttacacctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaatgctttg 21285890  T
Q  188 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    || |||||||||||||||||| |||||| | ||||||  |||||||||| ||||| |||||||||||  ||||||||| |||| ||||||||||||||||    
T  21285889 tt-aggttaaatgcgatctttatcgcacgagttgatgtgagttgatcttagaggtaagaaactaagtgctttatcttgttgttgttgtttcagtaagcct 21285791  T
Q  288 aaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
     |||| ||||||||||||||||||  |||| |||||||||||||||||||    
T  21285790 gaattatataatctaatattgttgttaatgatatataattgtatatacat 21285741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 39834290 - 39834160
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| |||||||||||| ||  ||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||  ||||    
T  39834290 ttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatctttgtgagtt 39834191  T
Q  130 gaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||||||||||| |||||||||||||    
T  39834190 gcacctgaactcgccatggcgagtagaggct 39834160  T

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Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 19801069 - 19801218
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | |||||||| | |||||||||||| |||||||||||||||||||||||| | |||| | |||||||||||||||||||||    
T  19801069 ttttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaatagttt 19801168  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagagg 158  Q
    | ||| ||| || ||| ||||  ||||||||||||||| |||||||||||    
T  19801169 aagaacgaacttgtgggagttatacctgaactcgccatggcgagtagagg 19801218  T

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Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 41598663 - 41598512
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| || ||| |||||||||||||||||   |||    
T  41598663 ttttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattt 41598564  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  41598563 tagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 41598512  T

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Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 5865918 - 5866009
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  5865918 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 5866009  T

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Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 18878879 - 18878972
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  18878879 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18878972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 17141393 - 17141302
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  17141393 ttttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 17141302  T

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Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 45130672 - 45130767
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  45130672 tttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 45130767  T

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Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 31971727 - 31971629
Alignment:
Q  5 gtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||||||| ||| | ||||||||||||| ||||||||| |||||||||||||||||||||||  || ||  ||||||||||||||||||    
T  31971727 gtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctggaat 31971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 6759736 - 6759643
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  6759736 ttttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 6759643  T

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Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 7373228 - 7373135
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||| |||||||||||||    
T  7373228 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 7373135  T

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Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 18818052 - 18818145
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||| | || ||  |||||||||||||||||    
T  18818052 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 18818145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 21491471 - 21491382
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    ||||||||||| || ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||    
T  21491471 ttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 22627214 - 22627125
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||    
T  22627214 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22627125  T

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Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 23406860 - 23406767
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  23406860 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 23406767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 16091983 - 16092073
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||| ||||||| ||||||    
T  16091983 ttttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctg 16092073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 20536692 - 20536594
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||| ||| ||| | ||||||||||||||||||||||| |||||| ||||||||||||||||| || ||  |||||||||||||||||    
T  20536692 tgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaa 20536594  T

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Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 21255699 - 21255605
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | |||||||||||||||||||  || |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  21255699 tttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 21255605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25362785 - 25362887
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||| ||||||||||||||| ||| | |||||||| |||||||| ||||| ||| |||||||||||||||||||| || ||  |||||||||||||||    
T  25362785 ttctgtatttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctgg 25362884  T
Q  101 aat 103  Q
    |||    
T  25362885 aat 25362887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 23649035 - 23648942
Alignment:
Q  6 tgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||  |||||||| |||||    
T  23649035 tgtttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctg 23648942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 28648686 - 28648779
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||| |||||| || ||  ||||||||||| |||||    
T  28648686 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaa 28648779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 21923565 - 21923660
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||| |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||| ||| || ||  ||||||||||||||    
T  21923565 tgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctg 21923660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 21249861 - 21249767
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | |||||||||||||||||||  || |||||||||||||||||||||||| || ||  ||||| |||||||||||    
T  21249861 tttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 21249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 5866097 - 5866201
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  5866097 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 5866195  T
Q  279 agtaag 284  Q
    ||||||    
T  5866196 agtaag 5866201  T

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Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 21918652 - 21918745
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||| ||||||||||| |||||||||||||||||| ||||| || ||   ||||||||||||||||    
T  21918652 ttttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaa 21918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 24353560 - 24353464
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  24353560 ctttagataattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttataaatggatttttgg 24353464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16199299 - 16199394
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | || ||||||||||||||||| || |||||| ||||||||||||||||| || ||  ||||||||||||| ||||    
T  16199299 tttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctagaat 16199394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 20499139 - 20499024
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||  ||||| ||| ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||  | |||||    
T  20499139 ttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctgagaaagttt 20499040  T
Q  109 aggaatgaatttttgg 124  Q
    |  |||| ||||||||    
T  20499039 aaaaatggatttttgg 20499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 37116884 - 37116813
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||||||||||||||||||    
T  37116884 ctttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 37116813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 17266577 - 17266647
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||||||||    
T  17266577 ctttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 17141206 - 17141110
Alignment:
Q  188 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||| |||||||||||||||   | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |||||||    
T  17141206 tttaggttgaatgcgatctttgtcattcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaag 17141110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 17439090 - 17439186
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  |||||| |||||||||||| | ||||||  |||| ||||||||    
T  17439090 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgggattgaacctgggaaagtttaaaaatggatttttgg 17439186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 40492436 - 40492506
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  |||||||||||||||||    
T  40492436 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacct 40492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 13507672 - 13507765
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  ||||||||| ||||||||| | ||||||  |||| |||||||    
T  13507672 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaatggatttttg 13507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 13597204 - 13597297
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  ||||||||| ||||||||| | ||||||  |||| |||||||    
T  13597204 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaatggatttttg 13597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 21491293 - 21491189
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||| |||||||||||||| |  | | || |||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  21491293 aatgcctt-tttaggttgaatgcgatctttgtagttcgagttaatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 21491195  T
Q  279 agtaag 284  Q
    ||||||    
T  21491194 agtaag 21491189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 2418460 - 2418532
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||||||| |||||||||||    
T  2418460 ctttagatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacctgg 2418532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 22996381 - 22996313
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  |||||||||||||||    
T  22996381 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaac 22996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 22875544 - 22875451
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||| |||||| | | | ||||||||||||||| | || || |||| |||||||||||||||||||||| |||  ||| ||||||||||||    
T  22875544 ttttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaa 22875451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 982987 - 983083
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| ||||||||| ||||| |||| || || |||||||||||| ||  ||||||||||||||||||  | ||||||  |||| ||||||||    
T  982987 ctttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 983083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 337
Target Start/End: Original strand, 983248 - 983382
Alignment:
Q  206 tttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatc---ttgctgttattgtttcagtaagcctaaattgtataatcta 302  Q
    |||||||||| | |||||   ||||||||||||||||  ||||||||||| ||||||   ||| |||| ||||||||||||| || |||| ||| ||  |    
T  983248 tttgtcgcacgagttgatatgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgttgtttcagtaagtctgaattatatgattga 983347  T
Q  303 atattgttgcgaatgttatataattgtatatacat 337  Q
    || ||||||  |||||||||||  |||||||||||    
T  983348 atgttgttgataatgttatatagctgtatatacat 983382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 16800026 - 16799958
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| | | ||  |||||||||||||||    
T  16800026 ctttagatgtttttgagtgcctgaatatgtataagaatgattaggcaggtttttagattgagattgaac 16799958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 17266821 - 17266965
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || |||| |||||| | ||||||  ||||||||  || ||| ||||||||||||  ||||||| ||||| |||||||||| |||||     
T  17266821 ttaggttaaatgtgacctttatcgcacgagttgatgtgagttgatcacgggggtaagaaactaagttgcttatcttactgttgttgtttcagtgagcctg 17266920  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| || | || |||||   ||||| |||||| |||||||    
T  17266921 aattatatgatttgatgttgttaataatgtgatataaatgtatat 17266965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 20498839 - 20498707
Alignment:
Q  205 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 304  Q
    ||||||| ||| | ||||||  |||||||||||||||| |||||||||||| ||||||||| ||||  |||||| ||||| || |  | ||| || | ||    
T  20498839 ctttgtcacacgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgatgttgatgtttcggtaagactgatgtatatgatttgat 20498740  T
Q  305 attgttgcgaatgttatataattgtatatacat 337  Q
     |||||   ||||| ||||||||||||||||||    
T  20498739 gttgtttataatgtgatataattgtatatacat 20498707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 21249682 - 21249607
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 255  Q
    |||||||| |||||||||||||||||||||||||  ||| ||||||  |||| ||||| |||||||| |||||||||    
T  21249682 aatgcctt-tttaggttaaatgcgatctttgtcgttcaagttgatgtgagtttatcttagaggttaggaactaagtt 21249607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 37116085 - 37116157
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatga-ttaggaaagattggagattgagattgaacctg 99  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||| ||  ||  ||||||||||||||||||    
T  37116085 ctttagatgattttgagtgcctgaatatgtataataatgatttaggcaaatttttagattgagattgaacctg 37116157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 22364954 - 22364851
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  ||||||||  || | | | ||||||||||  ||||||| ||||| ||||||||||||||||     
T  22364954 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcagggggataataaactaagttgcttatcttactgttgttgtttcagtaagcctg 22364855  T
Q  289 aatt 292  Q
    ||||    
T  22364854 aatt 22364851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 22365199 - 22365128
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||| ||||||||||||  |||||| |||||||||||||| ||| ||  |||||||| |||||||||    
T  22365199 ctttagatgattttgagtgcctagatatgtataataatgattaggcaagtttttagattgagtttgaacctg 22365128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 21389094 - 21389156
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||  |||||| |||||    
T  21389094 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 21414890 - 21414956
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||| ||||||||||||||| |||   | ||||||||||||||||||| ||| |||||||||||    
T  21414890 ttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22010314 - 22010384
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| |||||||||||| || ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  22010314 ttctgtatttttgactttttagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 22010384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 37116641 - 37116543
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    ||||| |||||| || |||||||| || | ||||||  || ||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||    
T  37116641 ttaggataaatgtgacctttgtcgtacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcct 37116543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19899579 - 19899510
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || |||||||||    
T  19899579 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 377762 - 377714
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  377762 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20465674 - 20465722
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  20465674 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 20465722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 21255520 - 21255445
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 255  Q
    |||||||| |||||||||||||||||||||||||  | | ||||||  |||| ||||| |||||||| |||||||||    
T  21255520 aatgcctt-tttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatcttagaggttaggaactaagtt 21255445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 15602660 - 15602722
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  15602660 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 15602722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 15611112 - 15611174
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  15611112 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 15611174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 16409898 - 16409960
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  16409898 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 16409960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 16860980 - 16861042
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  16860980 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 16861042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 19154472 - 19154538
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||| |||||||| ||||||||||| | |||||||||||| ||| ||  ||| |||||||||||    
T  19154472 ttagatgattttgagttcctgaatatgtattataatgattagggaagtttttagactgagattgaac 19154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 20532991 - 20533085
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaattttt 122  Q
    ||||||||| ||||||||| |||||| |||  ||||||||||||| ||  ||  ||||||||||||||| ||| | ||||||  |||| ||||||    
T  20532991 ctttagatgattttgagtgtctgaatgtgtacaataatgattaggcaaatttttagattgagattgaacttgggaaagtttaaaaatggattttt 20533085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30642926 - 30642996
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  30642926 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 30642996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17353572 - 17353641
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||| |||||| ||| ||| ||| |||||    
T  17353572 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtccctgaagatgcctattaaagatta 17353641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 22526032 - 22525951
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||| ||| ||||||||| |||||||||| ||| |||||||||| ||| |   ||||||| ||||||||||| | ||||||    
T  22526032 ctttatatgattttgagtgtctgaatatgtataagaatgattaggcaagttgttagattgaaattgaacctgggaaagttta 22525951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23776468 - 23776517
Alignment:
Q  1 ttctgtgtttttgacttttgagatga-cctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| |||||||||| ||||||||||||    
T  23776468 ttctgtatttttgacttttgagttgaacctttagatgtttttgagtgcct 23776517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 17085760 - 17085804
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||  ||||||||||||||| |||| ||||||||||||||    
T  17085760 ctttagataattttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18619938 - 18619894
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  18619938 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 18619894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 21395630 - 21395686
Alignment:
Q  14 acttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||  |||||| |||||    
T  21395630 acttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21395686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 21790123 - 21790179
Alignment:
Q  14 acttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||  |||||| |||||    
T  21790123 acttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21790179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22029017 - 22028973
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  22029017 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 22028973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 23668323 - 23668251
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||||| |||||||||| |||| |||| ||| |||||||||| ||| ||   |||||| |||||||||||    
T  23668323 ctttagatgattttgagtgcatgaacatgtataaaaatgattaggcaagtttttggattgaaattgaacctgg 23668251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 24353316 - 24353210
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatct---tgctgttattgtttcagtaagc 285  Q
    ||||| |||||| || ||||||||||| | ||||||  |||||||| ||| | | ||||||||||||  ||||||   || |||| ||||||||||||||    
T  24353316 ttaggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatggggataagaaactaagttgcttatcttactgttgttgttgtttcagtaagc 24353217  T
Q  286 ctaaatt 292  Q
    || ||||    
T  24353216 ctgaatt 24353210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 14234969 - 14234631
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||  ||||||||||||||| |||| |||| ||||||||||||||||  |||||||||||||||| | |||||||     
T  14234969 ttttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacccgaaatagtta 14234870  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    || ||||||||||||| ||||| ||||||||||||||| ||||||||||||  ||           |  ||||| ||| |||||||||||||||||||||    
T  14234869 ag-aatgaatttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttacagaatgccttgtttaggttaaat 14234771  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgt--ttcagtaagcctaaattgtata 297  Q
    | ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||| |||||| ||    
T  14234770 gtgatctttgtcgaacaagttgatgttagttgatcttggaggttagaaactaagttatttatcttgttgttgttgttgttcagtaagcctgaattgttta 14234671  T
Q  298 atctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  14234670 atctaatgttgttgctaatgttatataattgtatatacat 14234631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 15471403 - 15471068
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| |||||| ||| | ||||||| |||||||| |||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  15471403 ttttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaatagttt 15471304  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| |||||||  | ||||  ||||||||||||||| ||||||||||||  ||           || ||||| ||| ||||| |||||||||||||||    
T  15471303 aagaacgaattttgag-agttacacctgaactcgccatggcgagtagaggccctcgcctcgtgaactgcccagttacagaatgctttgtttaggttaaat 15471205  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||| ||| ||    
T  15471204 gcgatctttgtcgcacgagttgatgttagatgatcttggaggttagaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattatatgat 15471105  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||  ||||||  ||||||||||||||||||||||||    
T  15471104 ctaa-gttgttgttaatgttatataattgtatatacat 15471068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 276
Target Start/End: Complemental strand, 32308147 - 32307872
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct-ggaatagtt 107  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| |||| | ||    
T  32308147 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactt 32308048  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    || ||||||| |||||| |  |||||||||||||||||| ||||| ||||||| ||          |  |   || ||||||||||||||||||||||||    
T  32308047 ta-gaatgaa-ttttgggaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacataatgccttgtttaggttaaa 32307950  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 276  Q
    ||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  32307949 tgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgtt 32307872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 49389286 - 49389554
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||    
T  49389286 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 49389385  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctttgtccagtcacataatgccttgtttaggttaaatgcgatctt 207  Q
    || ||||||| |||||  |  |||||||||||||||||| ||||| |||||      || ||   || || | | ||||||||||||||||||||||| |    
T  49389386 ta-gaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagagg------ttctcgcctcgcagactaccttgtttaggttaaatgcgatcct 49389477  T
Q  208 tgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||| | ||||||   ||||||||| |||||||||||||||||| ||||||||| |||| ||||| |||||||    
T  49389478 tgtcgcacgagttgatgtgtgttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttccagtaag 49389554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 1465072 - 1465388
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| |||||||||||||||  ||| | || ||||||| ||||||||| ||||||||||||||||||||||| |||| ||| |||||| ||  ||||    
T  1465072 ttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctggaataatttaagaacgaatttgtgtgagtt 1465171  T
Q  130 gaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaattt 220  Q
    | ||||||||| ||||| ||||||||||||| ||           |  ||||| ||| |||||||||||||||||||| |  ||||||||||||| | ||    
T  1465172 gcacctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagtaatctttgtcgcacgagtt 1465271  T
Q  221 gatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgtta 320  Q
    ||||  |||||||||||||||||||||||||||||||||| |||| || | |  || ||||||||||  ||||| || |||||| ||| ||  |||||||    
T  1465272 gatgtgagttgatcttggaggttagaaactaagttatttaccttgatgctgtcattccagtaagcctggattgtttattctaatgttgatgataatgtta 1465371  T
Q  321 tataattgtatatacat 337  Q
    || ||||||||||||||    
T  1465372 tacaattgtatatacat 1465388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 12933952 - 12934236
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||   |||    
T  12933952 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 12934051  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
      ||||||| |||||  |  |||||||||||||||||| ||||| |||| || ||          |  |   || ||| | | |||||||||||||||||    
T  12934052 tagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagagactctcgcctcgcgagtacttgtgttacagacttccttgtttaggttaaat 12934151  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  12934152 gcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 12934236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 324695 - 324563
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtag 127  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||   |||||||||| |||||||||||||| ||    
T  324695 ctttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatgaatttttgggag 324596  T
Q  128 ttgaacctgaactcgccatagcgagtagaggct 160  Q
    ||| |||||||||||||||||||||||||||||    
T  324595 ttgcacctgaactcgccatagcgagtagaggct 324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 16097809 - 16097525
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||| ||| ||||||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||| ||   |||    
T  16097809 ttttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattt 16097710  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
      |||||||||||||  | ||| ||||||||||||||| | ||||||||||| ||           |  | ||| ||| |||| |||||||| |||||||    
T  16097709 tagaatgaatttttgtgaattggacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacaaaatgtcttgtttatgttaaat 16097610  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||||||||||||| ||||| |||||||    
T  16097609 gcgatctttgtcgcacgagttgatgtgagttgatcttagagattagaaactaagttgtttatcttgctgttgttgttccagtaag 16097525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 49667726 - 49668009
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||   |||    
T  49667726 ttttgacttttgagttgatccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 49667824  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgccttgtttaggtta 196  Q
      ||||||| | |||  |  |||||||||||||||||| ||||| ||||||| ||             ||||   || ||| | ||||||||||||||||    
T  49667825 tagaatgaaatattgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagactgccttgtttaggtta 49667921  T
Q  197 aatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||| ||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  49667922 aatacgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 49668009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 9513387 - 9513104
Alignment:
Q  11 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttag 110  Q
    |||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||   |||      
T  9513387 ttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagatttta 9513288  T
Q  111 gaatg-aatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatg 200  Q
    ||||| ||||||||  |  | ||||||||||| |||| ||||| ||||||| ||         ||  |   || ||| ||||||||| ||| ||||||||    
T  9513287 gaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcgagattacttgtgttacagaatgccttgcttatgttaaatg 9513188  T
Q  201 cgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||| || |||  |||| ||||| |||||||||||||||||| |||| |||| |||||||||| |||||||    
T  9513187 cgatctttgtcgcacaagtttatgtgagttaatcttagaggttagaaactaagttgtttaccttgttgttattgttccagtaag 9513104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 9521362 - 9521079
Alignment:
Q  11 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttag 110  Q
    |||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||   |||      
T  9521362 ttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagatttta 9521263  T
Q  111 gaatg-aatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatg 200  Q
    ||||| ||||||||  |  | ||||||||||| |||| ||||| ||||||| ||         ||  |   || ||| ||||||||| ||| ||||||||    
T  9521262 gaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcgagattacttgtgttacagaatgccttgcttatgttaaatg 9521163  T
Q  201 cgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||| || |||  |||| ||||| |||||||||||||||||| |||| |||| |||||||||| |||||||    
T  9521162 cgatctttgtcgcacaagtttatgtgagttaatcttagaggttagaaactaagttgtttaccttgttgttattgttccagtaag 9521079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 1644325 - 1644608
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg-gaatagtt 107  Q
    |||||||||||||| ||| | || |||| ||||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||||||| ||| | ||    
T  1644325 ttttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactt 1644424  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgccttgtttaggtt 195  Q
    ||| ||||||||||  | | | ||||||||||||||||| ||||| ||||||| ||             ||||   || ||| | ||||||||||| |||    
T  1644425 tag-aatgaattttgtgaact-gaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacaaactgccttgtttaagtt 1644519  T
Q  196 aaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||||||||| |||||||    
T  1644520 aaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttattgttccagtaag 1644608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 52523389 - 52523519
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||||||| ||||||||||||||| |||| ||||||| |||||||||||||  || |||| ||||||||||||| |||||| ||||| |||||||| |||    
T  52523389 tttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatggatttttgggagt 52523488  T
Q  129 tgaacctgaactcgccatagcgagtagaggc 159  Q
    |  ||||||||||||||||||||||||||||    
T  52523489 tacacctgaactcgccatagcgagtagaggc 52523519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 9 - 289
Target Start/End: Complemental strand, 16104259 - 16103971
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg-gaatagtt 107  Q
    |||||||||||||| ||| | ||||||| || |||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||| | ||    
T  16104259 ttttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgggaagactt 16104160  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc------tttgtccag---tcacataatgccttgtttaggttaaa 198  Q
    ||| | ||||||||  | | ||||| | ||||||| | | ||||| ||||||| ||      |  || | |   | ||| | ||||||||||||||||||    
T  16104159 tag-attgaattttgtgaa-ttgaatccgaactcgtcgtggcgagcagaggctctcgcctcgtgagtactggtgttacagactgccttgtttaggttaaa 16104062  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 289  Q
    |||| |||||||||||| | ||||||  |||| ||||| |||||||||||||||||| |||||||||||||| ||||| ||||||| ||||    
T  16104061 tgcgctctttgtcgcacgagttgatgtgagttaatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactaa 16103971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 53070341 - 53070491
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || ||| |||||||||||||||| ||  ||    
T  53070341 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-att 53070439  T
Q  109 aggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| ||||||| || || ||||||||||||||| |||||||||||||    
T  53070440 aagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggct 53070491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 2050864 - 2050992
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| |||||||||||| || |||| |||||||||||||||||||||  ||||||||||||||||  |||||||||| ||||| |||||||| ||||    
T  2050864 ttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc--gaatagtttaagaatggatttttgggagtt 2050961  T
Q  130 gaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||||| ||||||||||||||||||    
T  2050962 acacctgaactctccatagcgagtagaggct 2050992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 14573072 - 14572974
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  14573072 tgtgtttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 14572974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 17247928 - 17248079
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||   |||    
T  17247928 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 17248027  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  17248028 tagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 17248079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 40213363 - 40213514
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||   ||     
T  40213363 ttttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 40213462  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      ||||||| |||||| | |  |||||||||||||||  ||||| |||||||    
T  40213463 tagaatgaacttttgggaatctaacctgaactcgccacggcgagcagaggct 40213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 14179802 - 14179708
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  14179802 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 14179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 11424405 - 11424498
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||| | || ||| |||||||||||||||||    
T  11424405 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaa 11424498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 17499818 - 17499725
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  17499818 ttttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 18439013 - 18438920
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || | | |||||||||||||||||    
T  18439013 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaa 18438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 17488335 - 17488243
Alignment:
Q  10 tttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  17488335 tttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 20698089 - 20698183
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20698089 ttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 26687366 - 26687273
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  26687366 ttttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 26687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 13210148 - 13210240
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgtta 271  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||| |||||    
T  13210148 aatgccttgtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgttgtta 13210240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 14973333 - 14973245
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacc 97  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||| ||||    
T  14973333 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacc 14973245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 12340231 - 12340138
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  12340231 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 12340138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 4588457 - 4588547
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  ||||||||||||||    
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctg 4588547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 12399674 - 12399608
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaa 75  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  12399674 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaa 12399608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 13209969 - 13210062
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || ||||||||| ||||||||||||||  | ||| |||||||||||||||||    
T  13209969 tttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtagaatgagattgaacctggaa 13210062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 25476022 - 25476120
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||||||| ||| | ||||||| |||||||| |||||| ||||||||||||||||| |||||| || ||| |||||| ||||||||||    
T  25476022 tgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaa 25476120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 14576475 - 14576568
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| ||||||||| |||||||| ||||| || ||| ||| |||||||||||||    
T  14576475 ttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaa 14576568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 12171759 - 12171992
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtt 107  Q
    ||||||||||| || ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||             |||||||| | | ||    
T  12171759 ttttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattg-------------aacctggagagactt 12171845  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    ||| ||||||||||||  |  |||||||||||| ||||| ||||||||||||| ||         | |  | ||| ||| ||||||||||||||||||||    
T  12171846 tag-aatgaatttttgtgaactgaacctgaactggccatggcgagtagaggctctcgcctcgcgatctaactagttacagaatgccttgtttaggttaaa 12171944  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttaga 246  Q
    ||||||  ||||||||||| ||||||  |||||||||| |||||||||    
T  12171945 tgcgattcttgtcgcacaagttgatgtgagttgatcttagaggttaga 12171992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 23082998 - 23083155
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||| |||||||||||| ||||||||| | | || ||  |||||||| ||||||||     
T  23082998 tgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacctggaa- 23083096  T
Q  104 agtttaggaatgaa--tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    || ||  |||||||  |||||||    ||| ||| |||||||||| |||||||||||||    
T  23083097 agatttagaatgaaactttttggattctgacccttaactcgccatggcgagtagaggct 23083155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 605954 - 606048
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||| |||||||||||||||| ||| |||||||||||||| ||  ||  ||||||||||||||||||||| ||||||  |||| ||||||||    
T  605954 ttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaaagtttaaaaatggatttttgg 606048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 12852006 - 12852099
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| | | ||||||||||  ||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||| ||||||    
T  12852006 ttttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaa 12852099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 23275199 - 23275106
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||  |||| |||||||    
T  23275199 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttg 23275106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 30030306 - 30030213
Alignment:
Q  10 tttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||| ||| | |||||||| |||||||| ||||| ||||||||||||||||| |||||| ||  |  ||||||||||||||||||    
T  30030306 tttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctggaat 30030213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 43842657 - 43842572
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattga 94  Q
    ||||||||||| || ||| | ||||||||||||||||||||||  |||||||||||||||||||||||| || ||  |||||||||    
T  43842657 ttttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 17247162 - 17247230
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaaga 77  Q
    |||||||||||||| ||| | ||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  17247162 ttttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaaga 17247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 37250996 - 37251140
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||| | || ||||||||||| | ||||||  |||||||||||| ||| |||||||||||| |||||||| ||||| ||||| ||||||| ||     
T  37250996 ttaggttaaaagtgacctttgtcgcacgagttgatgtgagttgatcttgggggtaagaaactaagttgtttatcttactgttgttgttccagtaagtctg 37251095  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| || | || |||||   ||||| |||||| |||||||    
T  37251096 aattatatgatttgatgttgttaataatgtgatataaatgtatat 37251140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 45797703 - 45797631
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||| ||||||    
T  45797703 ctttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctgg 45797631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 22110180 - 22110287
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    ||||||| |||| || ||||||||||| | ||||||  |||||||| ||  ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  22110180 ttaggtttaatgtgacctttgtcgcacgaattgatgtgagttgatcatgagggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 22110279  T
Q  289 aattgtat 296  Q
    ||||||||    
T  22110280 aattgtat 22110287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 43927425 - 43927322
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    ||||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  43927425 ttaggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 43927326  T
Q  289 aatt 292  Q
    ||||    
T  43927325 aatt 43927322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 12378454 - 12378360
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| | | ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  12378454 ttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12378360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 14501657 - 14501587
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||| ||||||    
T  14501657 ttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattgagattggacctgg 14501587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 13442725 - 13442660
Alignment:
Q  37 cttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||||| |||||||||||||||||||||| | || ||  |||||||||||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 13442660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 14666084 - 14665991
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||   ||||||||||||| ||| |||||| ||||||||||||| || ||  |||||||||||||||||    
T  14666084 ttttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa 14665991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 14669239 - 14669146
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||   ||||||||||||| |||||||||| ||| ||||||||| || ||  |||||||||||||||||    
T  14669239 ttttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaa 14669146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 14735597 - 14735504
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||   ||||||||||||| ||| |||||| ||||||||||||| || ||  |||||||||||||||||    
T  14735597 ttttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa 14735504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 21837959 - 21837866
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaattttt 122  Q
    |||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||  |||| ||||||    
T  21837959 tttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggattttt 21837866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 23412836 - 23412929
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    ||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  |||||||||||| |||||| | ||||||  |||| |||||||    
T  23412836 ttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctgggaaagtttaaaaatggatttttg 23412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 316656 - 316592
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagatt 92  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||    
T  316656 ctttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatt 316592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 43927640 - 43927544
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||  ||| ||  |||||||| |||||||||| | ||||||  |||| ||||||||    
T  43927640 ctttagatgattttgagtgcctgaacatgtataataatgattagacaagtttttagattgagtttgaacctgggaaagtttaaaaatggatttttgg 43927544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 22109936 - 22110007
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  || |||||||||||||||    
T  22109936 ctttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 12340057 - 12340017
Alignment:
Q  175 acataatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  12340057 acataatgccttgtttaggttaaatgtgatctttgtcgcac 12340017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 14665906 - 14665870
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  14665906 aatgccttgtttaggttaaatgcgatctttgtcgcac 14665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 14735419 - 14735383
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  14735419 aatgccttgtttaggttaaatgcgatctttgtcgcac 14735383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 37250773 - 37250869
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || |||||  ||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  37250773 ctttagatgattctgagtatctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 37250869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 42386858 - 42386739
Alignment:
Q  41 tgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaat-ttttggtagttgaacctgaac 139  Q
    ||||||| |||| |||  |||||||||||||| |||| |  ||| || ||||||||||| ||||||| || ||||||  |||||| ||||  ||||||||    
T  42386858 tgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctgaaatagttaag-aatgaaacttttgggagttatacctgaac 42386760  T
Q  140 tcgccatagcgagtagaggct 160  Q
    ||||||| |||||||||||||    
T  42386759 tcgccatggcgagtagaggct 42386739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 16809865 - 16809774
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | ||| |||||||||||||| |||| ||    |||||||||||||||||| || ||  ||||||||| ||||||||    
T  16809865 tttttgacttttgagttgaaccttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcctggaat 16809774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 26190647 - 26190692
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  26190647 tgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 26190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 4588608 - 4588644
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4588608 aatgccttgtttaggttaaatgcgagctttgtcgcac 4588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 9578138 - 9578070
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||||  |||||||||||||| |||| | |||||||||||| ||||||  ||||||| |||||||    
T  9578138 ctttagatgactttgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaac 9578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11298164 - 11298212
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  11298164 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 11298212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 14669061 - 14669025
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    ||||||||||||||||||||| |||||||||||||||    
T  14669061 aatgccttgtttaggttaaattcgatctttgtcgcac 14669025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 37428229 - 37428162
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||| |||||||||||| ||||||| ||| |||||||||| ||| ||  ||||||| |||||||    
T  37428229 tttagatggttttgagtgccttaatatgtataagaatgattaggcaagtttttagattgaaattgaac 37428162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12173269 - 12173199
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  12173269 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 12173199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 12496730 - 12496668
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  12496730 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 12496668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 18383560 - 18383622
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  18383560 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 18383622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23077113 - 23077183
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | || ||||||||||||||||| || |||| || ||| ||||||    
T  23077113 ttctgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaagatgtttattaaagattag 23077183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 856619 - 856550
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| |||||||||||| || ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  856619 ttctgtatttttgactttttagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 856550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 15060767 - 15060706
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  15060767 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 15060706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 15877471 - 15877532
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  15877471 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 15877532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 321649 - 321697
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  321649 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 3389600 - 3389640
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  3389600 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 3402609 - 3402649
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  3402609 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17674218 - 17674258
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  17674218 ttttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 39705930 - 39706266
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  39705930 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaatagttt 39706029  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| |||||||  | ||||  ||||||||||||||| ||||||||||||  ||           || ||||| ||| ||||| |||||||||||||||    
T  39706030 aagaacgaattttgag-agttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 39706128  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||||||||||||| | ||||||  |||||||||||||| |||| || |||||| |||||||||||||| |||||| ||||||||| |||| ||| ||    
T  39706129 gcgatctttgtcgcacgagttgatgtgagttgatcttggagattaggaattaagttgtttatcttgctgttgttgttttagtaagcctgaattatatgat 39706228  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  39706229 ctaatgttgttgctaatgttatataattgtatatacat 39706266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 15099808 - 15099492
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| |||||||||||||||  ||| | || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||    
T  15099808 ttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatttttgtgagtt 15099709  T
Q  130 gaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaattt 220  Q
    | ||||||||||||||| ||||||||||||| ||           |  ||||| ||| |||| ||||||||||||||| |||||||||||||||  | ||    
T  15099708 gcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgtttaggttaaaagcgatctttgtcgcatgagtt 15099609  T
Q  221 gatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgtta 320  Q
    ||||  |||||||||||||||||||||||||||||||||| |||| |||| |  || ||||||||||  |||||||| |||||| ||| ||  |||||||    
T  15099608 gatgtgagttgatcttggaggttagaaactaagttatttaccttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataatgtta 15099509  T
Q  321 tataattgtatatacat 337  Q
    |||||||||||||||||    
T  15099508 tataattgtatatacat 15099492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 15190775 - 15190459
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||| ||  ||||||||||| |||||||||||||||| ||||| ||||||||  |||    
T  15190775 ttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaatagtttaagaatggatttttgggcgtt 15190676  T
Q  130 gaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaattt 220  Q
      | ||| ||||||||| ||||||||||||| ||           |  ||||| ||| |||||||||||||||||||| |||||||||||||||| | ||    
T  15190675 acatctgtactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagtt 15190576  T
Q  221 gatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgtta 320  Q
    ||||  |||||||||||| ||||||||||||||||||||| |||| |||| |  || ||||||||||  |||||||| |||||| ||| ||  |||||||    
T  15190575 gatgtgagttgatcttgggggttagaaactaagttatttaccttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataatgtta 15190476  T
Q  321 tataattgtatatacat 337  Q
    |||||||||||||||||    
T  15190475 tataattgtatatacat 15190459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 8846854 - 8846569
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| |||   ||||||| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   |||    
T  8846854 ttttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 8846755  T
Q  109 aggaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
      |||||||||||| || ||||| |||| |||||||||| ||||||||||||| ||           |  | ||| ||| |||| |||||||| ||||||    
T  8846754 tagaatgaattttttgtgagttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttatgttaaa 8846655  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||| | ||||||  |||||| ||| ||| |||||||||||||| |||||||||  ||| ||||| |||||||    
T  8846654 tgcgatctttgtcgcacgagttgatgtgagttgaacttagagattagaaactaagttgtttatcttgtagttgttgttccagtaag 8846569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 12774477 - 12774194
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||| | |  |    
T  12774477 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgt 12774378  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgccttgtttaggtt 195  Q
    ||| ||||||||||  | | | ||||||||||||||||| ||||| ||||||| ||             ||||   || ||| | |||||||||||||||    
T  12774377 tag-aatgaattttgtgaact-gaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagactgccttgtttaggtt 12774283  T
Q  196 aaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||    
T  12774282 aaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaag 12774194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 15464591 - 15464722
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||| ||||||||  ||    
T  15464591 tttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggatttttgggtgt 15464690  T
Q  129 tgaacctgaactcgccatagcgagtagaggct 160  Q
    |  |||||||||| ||||||||||||||||||    
T  15464691 tacacctgaactcaccatagcgagtagaggct 15464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 43198251 - 43198381
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||  |||||||| ||||    
T  43198251 ttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaatagtttaagaattgatttttgggagtt 43198350  T
Q  130 gaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||||| ||||||||||||||||||    
T  43198351 acacctgaactcaccatagcgagtagaggct 43198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 52242855 - 52242986
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||||||| ||| ||||||||||| |||| |||||||||| ||||||||||  ||| |||||||||||||||||||||||| ||||| ||| |||| |||    
T  52242855 tttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagt 52242954  T
Q  129 tgaacctgaactcgccatagcgagtagaggct 160  Q
    |  |||||||||||||||||||||||||||||    
T  52242955 tacacctgaactcgccatagcgagtagaggct 52242986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 189 - 337
Target Start/End: Original strand, 12288038 - 12288186
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    ||||||| |||| ||  ||||||||| || ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  12288038 ttaggtttaatgtgacttttgtcgcataagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 12288137  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||| ||| || |||| ||||||  ||||||||||| ||||||||||||    
T  12288138 aattatatgatttaatgttgttggtaatgttatatagttgtatatacat 12288186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 13845018 - 13844867
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||||| || ||| | ||||||| ||||||||| ||||| ||||||||| |||||||| |||||||  ||||  ||||| |||||||||||||||    
T  13845018 ttttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaagattctagatcaagatttaacctggaatagttt 13844919  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||| |||||||| ||||  ||||| ||| ||||| |||||||||||||    
T  13844918 aagaatggatttttgggagttacacctgtacttgccatggcgagtagaggct 13844867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 14052954 - 14053049
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||| ||||||    
T  14052954 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaat 14053049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 14039128 - 14039039
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||| ||||||| || ||| |||||||||||||    
T  14039128 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacct 14039039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 15091376 - 15091283
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| ||||||||||||||||||  ||||| |||||||||| ||||||||||||| || ||| |||||||||||||||||    
T  15091376 ttttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaa 15091283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 16597124 - 16597031
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||| ||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  16597124 ttttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 7089345 - 7089251
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | |||||||| | |||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  7089345 ttttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 7089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 12903224 - 12903131
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||| ||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  12903224 ttttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 12903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 15552293 - 15552199
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  15552293 tttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 15552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 16239634 - 16239728
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaag-attggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||  | ||||||||||||||||||||||| ||||||||||||||||||||||| | || ||| |||||||||||||||||    
T  16239634 ttttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaa 16239728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 22636918 - 22636820
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| ||||||||| |||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22636918 tgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 6190912 - 6190819
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || ||  |||||||||||||||||    
T  6190912 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 6190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 22633855 - 22633948
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| ||||||||||  ||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  22633855 ttttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22633948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 44928565 - 44928658
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| || ||||||||||||||||||||| || ||| |||||||||||||||||    
T  44928565 ttttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaa 44928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 21814945 - 21815095
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||| ||||||||||||||||||| |  ||| ||| | |||||||||| ||  ||    
T  21814945 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggatta-att 21815043  T
Q  109 aggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| ||||||| || || || |||||||||||| |||||||||||||    
T  21815044 aagaatgaactttttggaagctg-acttgaactcgccatggcgagtagaggct 21815095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 21815274 - 21815424
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||| ||||||||||||||||| | |  ||| ||| | |||||||||| ||  ||    
T  21815274 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctggatta-att 21815372  T
Q  109 aggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| ||||||| || || ||||||||||||||| |||||||||||||    
T  21815373 aagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggct 21815424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 21818367 - 21818517
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||| ||||||||||||||||||| |  ||| ||| | |||||||||| ||  ||    
T  21818367 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggatta-att 21818465  T
Q  109 aggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| ||||||| || || || |||||||||||| |||||||||||||    
T  21818466 aagaatgaactttttggaagctg-acttgaactcgccatggcgagtagaggct 21818517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 15868298 - 15868377
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||| | ||||||    
T  15868298 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgggaaagttta 15868377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 3097111 - 3097017
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| | | | ||||||| ||| ||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  3097111 ttttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 3097017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 16377164 - 16377258
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||| | ||||| |||||||||||||||||||||| | || ||  ||||||||||||||||||    
T  16377164 ttttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaat 16377258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 44053308 - 44053218
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||| ||||||| || ||  ||||||||||||||    
T  44053308 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctg 44053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 20156932 - 20157025
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| | | | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  20156932 ttttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 20157025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 7799176 - 7799083
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||| |||| ||| | ||||||||||||||||||||||| ||| |||||||||||||||| | | || ||  |||||||||||||||||    
T  7799176 ttttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaa 7799083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 13812451 - 13812544
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||| |||||||| ||||| |||||||||| ||||||||||| | || ||  |||||||||||||||||    
T  13812451 ttttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaa 13812544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 24029220 - 24029127
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||  |||||||||||||| |||||||||| |||||| |||||| || ||  |||||||||||||||||    
T  24029220 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaa 24029127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17047718 - 17047813
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||| ||||||||||||||| ||| | |||||||  |||||||||||||| ||| |||||||||||||||||| | || ||  |||||||||||    
T  17047718 ttctgtatttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac 17047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 46640285 - 46640387
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| |||||||||||||||||| |||     
T  46640285 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttatcttactgttattgtttcagtaaacctg 46640383  T
Q  289 aatt 292  Q
    ||||    
T  46640384 aatt 46640387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 16596946 - 16596789
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||| |||| |||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| ||||      
T  16596946 aatgcctt-tttaggttgaatgtgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttca 16596848  T
Q  279 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| || |    |||||  |||| ||| |   ||||||||||||||||||||||||    
T  16596847 agtaagactgatgcttataaattaatgttgcttataatgttatataattgtatatacat 16596789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 13434 - 13515
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||||| ||||||||||||||| | || |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||    
T  13434 ctttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagttta 13515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 53081979 - 53082124
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta-gaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    |||||||||||| ||  |||||||||| | ||||||  |||||||||||| || || |||||||||||  ||||||| ||||| ||||||||||||||||    
T  53081979 ttaggttaaatgtgacatttgtcgcacgagttgatgtgagttgatcttggggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcct 53082078  T
Q  288 aaattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
     |||| ||| || | || |||||   ||||| |||||| |||||||    
T  53082079 gaattatatgatttgatgttgttaataatgtgatataaatgtatat 53082124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 17333817 - 17333749
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  |||||||||||||||    
T  17333817 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17333749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 44102688 - 44102597
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    |||||||||||||| ||| | ||||||||||||||||||||||  |||| |||||||||||| | |||| || ||  ||||||||||||||||    
T  44102688 ttttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctgga 44102597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 53081758 - 53081854
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || ||||||||| || |||| |||||||||||| | ||| ||  ||||||||||||||||||||| ||||||  |||| ||||||||    
T  53081758 ctttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctggaaaagtttaaaaatggatttttgg 53081854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 22634033 - 22634075
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttg 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  22634033 aatgccttgtttaggttaaatgcgatctttgtcgcacgatttg 22634075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 32851909 - 32851839
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||    
T  32851909 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattggacctgg 32851839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 26789874 - 26789793
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||| ||| ||  ||||||| ||||||| ||| | ||||||    
T  26789874 ctttagatgattttgagtgcctgaatatgtataataacgattaggcaagtttttagattgaaattgaacatgggaaagttta 26789793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 152605 - 152537
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||||||| |||||||    
T  152605 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaac 152537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 15792311 - 15792243
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||||||| |||||||    
T  15792311 ctttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgaaattgaac 15792243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 24029042 - 24029006
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  24029042 aatgccttgtttaggttaaatgcgatctttgtcgcac 24029006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 3332186 - 3332151
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgca 214  Q
    ||||||||||||||||||||||||||||||||||||    
T  3332186 aatgccttgtttaggttaaatgcgatctttgtcgca 3332151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 15552106 - 15552039
Alignment:
Q  188 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 255  Q
    ||||||| |||||||||||||||||  | | ||||||  |||||||||| ||||||||||||||||||    
T  15552106 tttaggtaaaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagtt 15552039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 12287796 - 12287890
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||| || | |||| ||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  12287796 ttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12287890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16356588 - 16356658
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  16356588 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 16356658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 17046765 - 17046727
Alignment:
Q  39 tttgagtgcctgaatatgtctaataatgattaggaaaga 77  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaaga 17046727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 20157112 - 20157146
Alignment:
Q  181 tgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||||||||||||    
T  20157112 tgccttgtttaggttaaatgcgatctttgtcgcac 20157146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 13695 - 13827
Alignment:
Q  205 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 304  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||  ||||  |||| ||||||| || |  | ||| || | ||    
T  13695 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgat 13794  T
Q  305 attgttgcgaatgttatataattgtatatacat 337  Q
     |||||   ||||| ||||||||||||||||||    
T  13795 gttgtttataatgtgatataattgtatatacat 13827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 16043549 - 16043481
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||| ||||||| ||| ||||||||| ||| |||  ||||||| |||||||    
T  16043549 ctttagatgattttgagtgcctcaatatgtataagaatgattagaaaaaattttagattgaaattgaac 16043481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 46640041 - 46640137
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || |||||||||||| ||||  ||||||||||||| ||| ||  ||||||||||| ||||| | | ||||||  |||| ||||||||    
T  46640041 ctttagatgattctgagtgcctgaacatgtaaaataatgattaggcaagtttttagattgagattaaacctaggaaagtttaaaaatggatttttgg 46640137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 32306581 - 32306648
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||| |||||||||||| || |||| |||||||||||||| ||| ||  ||||||| |||||||    
T  32306581 tttagatggttttgagtgcctaaacatgtataataatgattaggcaagtttttagattgaaattgaac 32306648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15094257 - 15094187
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  15094257 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 15094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 32851676 - 32851642
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgc 213  Q
    ||||||| |||||||||||||||||||||||||||    
T  32851676 aatgcctggtttaggttaaatgcgatctttgtcgc 32851642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 44676109 - 44676047
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || |||||||||    
T  44676109 tttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 44676047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3413256 - 3413212
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  3413256 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 3413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13569996 - 13569948
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  13569996 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 13812629 - 13812665
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  13812629 aatgctttgtttaggttaaatgtgatctttgtcgcac 13812665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 16348335 - 16348375
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  16348335 ttttgacttttgagttgaaccttagatgcttttgagtgcct 16348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 2286 - 2623
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  2286 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggattagtta 2385  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat---ct------ttgtccagtcacataatgccttgtttaggttaaat 199  Q
    || || | | || ||| ||||  ||||||||||||||| |||||||||||| ||   ||      ||| | ||| ||| ||||||||||||||| |||||    
T  2386 ag-aacgtacttgtgggagttatacctgaactcgccatggcgagtagaggccattgcctcgcgaattgactagttacagaatgccttgtttaggataaat 2484  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
    |||||||||||||||||| ||||||  |||||||||| ||||||||||| |||||| |||||||||||| | |||||||||||||||| ||||  ||| |    
T  2485 gcgatctttgtcgcacaagttgatgtgagttgatcttagaggttagaaattaagttgtttatcttgctgatgttgtttcagtaagcctgaattaatatga 2584  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| ||||||  |||| |||||||||||||||||||    
T  2585 tctaatgttgttgttaatggtatataattgtatatacat 2623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 10986 - 10671
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||||  ||||    
T  10986 ttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatgaatttttgtgagtt 10887  T
Q  130 gaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaattt 220  Q
      ||||||||||||||||||||||||||||| ||          ||  | |||  || ||||||||||| |||||||||||||||| |||||||| | ||    
T  10886 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacctagttccaaaatgccttgtt-aggttaaatgcgatctctgtcgcacgagtt 10788  T
Q  221 gatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgtta 320  Q
    ||||  |||||||||| ||||| |||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||  ||||| |    
T  10787 gatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgtca 10688  T
Q  321 tataattgtatatacat 337  Q
    |||||||||||||||||    
T  10687 tataattgtatatacat 10671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 337
Target Start/End: Complemental strand, 32996 - 32679
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtag 127  Q
    ||||||||| || |||||||||||| |||| |||||||||||||||||||||  ||||||||||||||| ||||||||| || ||||| |||||||| ||    
T  32996 ctttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatggatttttgggag 32897  T
Q  128 ttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaat 218  Q
    ||  ||||||||||||||| ||||||||||||  ||           |  ||||| ||| |||||||||||  |||||||||||||||||||||||| |     
T  32896 ttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgttg-ggttaaatgcgatctttgtcgcacgag 32798  T
Q  219 ttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgt 318  Q
    ||||||  |||||||||| ||||| |||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||| || |||  |||||    
T  32797 ttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgttattgtttcagtaagcctgaattatataatctaatgtttttgttaatgt 32698  T
Q  319 tatataattgtatatacat 337  Q
    |||||| ||||||||||||    
T  32697 tatatagttgtatatacat 32679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 51526 - 51619
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || ||  |||||||||||||||||    
T  51526 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 51619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 7290 - 6953
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   |||    
T  7290 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 7191  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat---ctt------tgtccagtcacataatgccttgtttaggttaaat 199  Q
      |||||||||||||  |  |||||||||||||||||| ||||||||||||| |   |||      |  | ||| ||| |||||||||||||||||||||    
T  7190 tagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgccttgcgagctaactagttacagaatgccttgtttaggttaaat 7091  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||  ||||||||||| ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||| || |    ||| |     
T  7090 gcgattcttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaa 6991  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
     |||| |||||   ||||||||||||||||||||||||    
T  6990 ttaatgttgtttataatgttatataattgtatatacat 6953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 38 - 337
Target Start/End: Complemental strand, 8466 - 8159
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaacctga 137  Q
    ||||| ||| |||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||| |||||||| ||||  ||||||    
T  8466 ttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagttacacctga 8367  T
Q  138 actcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctag 228  Q
    ||||||||| |||||| |||||  ||          ||||||||| ||||||||| ||||| ||||  |||| |||||||||| ||| | ||||||  ||    
T  8366 actcgccatggcgagtggaggccctcgcctcgcgagttgtccagttacataatgctttgtt-aggtataatgtgatctttgtctcacgagttgatgtgag 8268  T
Q  229 ttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattg 328  Q
    |||||||| ||||| || ||||||||| |||||| ||||||| |||||||||||||||| |||| ||||||||||| ||||||  |||||||||||||||    
T  8267 ttgatcttagaggtaaggaactaagttgtttatcctgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgttatataattg 8168  T
Q  329 tatatacat 337  Q
    |||||||||    
T  8167 tatatacat 8159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 7015 - 6678
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | || |||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7015 ttttgacttttgagttgatcctttgatg-ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaatagttt 6917  T
Q  109 aggaatgaatttt-tggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaa 198  Q
    | ||| |||  || ||| ||||  ||||||||||||||| |||||| |||||  ||          ||| | ||| ||| ||||||||||||||| ||||    
T  6916 aagaacgaaacttgtgggagttatacctgaactcgccatggcgagtggaggccctcccctcgcgaattgactagttacaaaatgccttgtttaggataaa 6817  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtata 297  Q
    ||||||||||||||||||| ||||||  |||||||||| ||||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||  |||     
T  6816 tgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttaaaaactaagtt-gttatcttgctgttgttgtttcagtaagcctgaattaatatg 6718  T
Q  298 atctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||| ||||||  |||| |||||||||||||||||||    
T  6717 atctaatgttgttgttaatggtatataattgtatatacat 6678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 8770 - 8666
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  | |||||||| ||||| |||||||||||| |||||||||||| | ||||| |    
T  8770 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcttagaggtaagaaactaagttgtttatcttgctgatgttgttcc 8672  T
Q  279 agtaag 284  Q
    ||||||    
T  8671 agtaag 8666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 7092 - 6755
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| |||||||||||| || |||| |||| ||||||||||||||||  ||||| |||||||||||||||||||||    
T  7092 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 6993  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||||| |||||||| | ||  ||||||||||||||| ||||||||||||  ||           |  ||||| | | ||||| |||||||||||||||    
T  6992 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 6893  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||||||||||||| | ||||||  |||||| ||||||| |||||| ||||||| |||||||||||||| |||||| ||||||| | |||| ||| ||    
T  6892 gcgatctttgtcgcacgagttgatgtgagttgaacttggagattagaatctaagttgtttatcttgctgttgttgttttagtaagcttgaattatatgat 6793  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||  ||||||||||||||||||||||||    
T  6792 ctaatgttgttgttaatgttatataattgtatatacat 6755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 14472 - 14135
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| ||| || ||| | ||||||| |||||||||||| || |||| |||| ||||||||||||||||  ||||| |||||||||||||||||||||    
T  14472 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 14373  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||||| |||||||| | ||  ||||||||||||||| ||||||||||||  ||           |  ||||| | | ||||| |||||||||||||||    
T  14372 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 14273  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataat 299  Q
    |||||||||||||||| | ||||||  |||||| ||||||| |||||| ||||||| |||||||||||||| |||||| ||||||| | |||| ||| ||    
T  14272 gcgatctttgtcgcacgagttgatgtgagttgaacttggagattagaatctaagttgtttatcttgctgttgttgttttagtaagcttgaattatatgat 14173  T
Q  300 ctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||| ||||||  ||||||||||||||||||||||||    
T  14172 ctaatgttgttgttaatgttatataattgtatatacat 14135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 337
Target Start/End: Complemental strand, 28406436 - 28406120
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttg 130  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| ||   |||  |||| || |||||  |  ||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaactg 28406337  T
Q  131 aacctgaactcgccatagcgagtagaggctatctttgtcca---------gtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttg 221  Q
    |||||||||||||||| ||||||||||||| ||      ||         || ||||||||||||||||||||||||||||||| ||||||||| | |||    
T  28406336 aacctgaactcgccatggcgagtagaggctctcgcctcgcaagtacttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgcacgagttg 28406237  T
Q  222 atgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgtta 320  Q
    |||  |||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||||||||| ||  ||| ||||| | ||||||  |||| ||    
T  28406236 atgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttttagtaagcctaatttaatatgatctattgttgttgttaatggta 28406137  T
Q  321 tataattgtatatacat 337  Q
    |||||||||||||||||    
T  28406136 tataattgtatatacat 28406120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 335
Target Start/End: Complemental strand, 25176321 - 25175995
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||| |||||| ||| | ||||||| ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  25176321 ttttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaatagttt 25176222  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
    | |||   |||||||  ||||  ||||||||||||||| ||||||||||||  ||           ||  |||| ||| |||||||||||||            
T  25176221 aagaacagatttttgagagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcgcagttacagaatgccttgttta-------- 25176130  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
      |||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| |    
T  25176129 --gatctttgtcgcacgaattgatgtaagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatga 25176032  T
Q  299 tctaatattgttgcgaatgttatataattgtatatac 335  Q
    |||||| ||||||  |||||||||||||| |||||||    
T  25176031 tctaatgttgttgttaatgttatataattatatatac 25175995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 22133859 - 22134141
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct-ggaatagtt 107  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| | ||    
T  22133859 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactt 22133958  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    || ||||||| |||||  |  |||| ||||||||||||| ||||| ||||||| ||          |  |   || ||| | ||||||||||||||||||    
T  22133959 ta-gaatgaa-ttttgtgaactgaa-ctgaactcgccatggcgagcagaggctctcgcctcgcgaatacttgtgttacagactgccttgtttaggttaaa 22134055  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||||    
T  22134056 tgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcatttttccagtaag 22134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 23708261 - 23708411
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||  ||||| ||| ||||||||| ||||||||| ||||| || | || ||||||||||||||| | | |||||||||||||| | ||||||||||    
T  23708261 ttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatc-ggaatagttt 23708359  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||| |||||||| ||||  |||||||||||||||||||||||||||||    
T  23708360 aagaatggatttttgggagttacacctgaactcgccatagcgagtagaggct 23708411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 337
Target Start/End: Original strand, 7556 - 7709
Alignment:
Q  184 cttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaa 283  Q
    |||| ||||||| |||| || ||||||||||| | ||||||  ||||||||||||||||  ||||||||||| |||||| || |||| ||||||||||||    
T  7556 cttggttaggtttaatgtgacctttgtcgcacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgtttcagtaa 7655  T
Q  284 gcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||| |||| ||| || |||| ||||||  ||||| ||||||||||||||||||    
T  7656 gcctgaattatatgatttaatgttgttgttaatgtgatataattgtatatacat 7709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 23660501 - 23660408
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  23660501 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 23660408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 337
Target Start/End: Original strand, 18786748 - 18786879
Alignment:
Q  206 tttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaata 305  Q
    |||||||||| | ||||||  ||||||||||||||||  ||||||||||| |||||| ||||||| ||||||||||||||||||||| ||| ||  |||     
T  18786748 tttgtcgcacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgctgttgttgtttcagtaagcctaaattatatgattgaatg 18786847  T
Q  306 ttgttgcgaatgttatataattgtatatacat 337  Q
    || |||  ||||||||||| ||||||||||||    
T  18786848 ttattgataatgttatatagttgtatatacat 18786879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 20309574 - 20309479
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20309574 tttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 23654052 - 23654146
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | |||||||||||||| |||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  23654052 ttttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 23654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 298457 - 298550
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  |||||||||||||||||    
T  298457 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaa 298550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 22730875 - 22730968
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22730875 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 27754054 - 27753961
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  27754054 ttttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 27753961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 189 - 333
Target Start/End: Complemental strand, 23791567 - 23791423
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||| |||| ||||||||||| ||||||||| |||| ||||||||||||||||     
T  23791567 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttgggggttggaaactaagttgtttatcttgttgttgttgtttcagtaagcctg 23791468  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| || | || |||||   ||||| |||||| |||||||    
T  23791467 aattatatgatttgatgttgttaataatgtgatataaatgtatat 23791423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 23286329 - 23286235
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||  ||||||||||| ||||||    
T  23286329 ttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaat 23286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 22737822 - 22737911
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| || ||||||||||||||||||||| || ||  |||||||||||||    
T  22737822 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacct 22737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 23071626 - 23071695
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  23071626 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 23071695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 28291943 - 28292027
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagatt 92  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||| ||||||||||||||| || ||| |||||||    
T  28291943 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 37768 - 37863
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||||  || | ||||||||||||||||||||||| ||||||||||||||||||||||   || ||  ||||||||||||||||||    
T  37768 tttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctggaat 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 22337591 - 22337501
Alignment:
Q  12 tgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||| ||| | |||||||||||||||||  |||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22337591 tgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 22459381 - 22459485
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| |||||||||| || |||||||  || | ||||||  |||||| ||| ||||| |||||||||||| ||||||||||||||||||||||    
T  22459381 aatgccttgtt-aggttaaatgtgacctttgtcctacgagttgatgtgagttgaccttagaggtaagaaactaagttgtttatcttgctgttattgtttc 22459479  T
Q  279 agtaag 284  Q
    ||||||    
T  22459480 agtaag 22459485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 32451571 - 32451664
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || ||  ||||||||||| |||||    
T  32451571 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaa 32451664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 23076919 - 23076769
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||| || || ||| | ||||||||||||||||||||||| |||||||||||| ||||||||||| || ||  |||||||| |||||||| || ||    
T  23076919 ttttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaa-agatt 23076821  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||  ||||| | |   ||||||||||||||  |||||||||||||    
T  23076820 tagaatgaaactttggaattctgacctgaactcgccacggcgagtagaggct 23076769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 333
Target Start/End: Complemental strand, 23207570 - 23207426
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||| ||| ||||||||||||  ||||||| ||||| |||||  |||||||||     
T  23207570 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttcaagtaagcctg 23207471  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| || | || |||||   ||||| |||||| |||||||    
T  23207470 aattatatgatttgatgttgttaataatgtgatataaatgtatat 23207426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 25109181 - 25109078
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| ||| | | ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  25109181 ttaggttaaatgtgacctttgtcgcacgagttgatgtaagttgatcatggggataagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 25109082  T
Q  289 aatt 292  Q
    ||||    
T  25109081 aatt 25109078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 22412720 - 22412816
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || |||||||||||| |||| | |||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  22412720 ctttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 22412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 23207814 - 23207718
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||| | | ||||||  |||| ||||||||    
T  23207814 ctttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 23207718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 39827600 - 39827648
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaag 76  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  39827600 ctttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24658124 - 24658055
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || |||||||||    
T  24658124 ttctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgatta 24658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 18546549 - 18546617
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||||||| |||||||    
T  18546549 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaac 18546617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 19672360 - 19672290
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| |||||||||  ||||||||| |||||||||||||| ||| ||  |||||||| ||||||||||    
T  19672360 ttagatgattttgagtgtttgaatatgtataataatgattaggcaagtttttagattgagcttgaacctgg 19672290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 23005265 - 23005184
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| ||| ||   |||||||||||||| ||| | ||||||    
T  23005265 ctttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaacttgggaaagttta 23005184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 18786469 - 18786565
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| ||||||||||||||| | || || || |||||||| ||| ||  ||||||||||||||||||  | ||||||  |||| ||||||||    
T  18786469 ctttagatgattttgagtgcctgaacacgtatattattgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 18786565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 20519777 - 20519845
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |  |||||||||||| |||| |||||||||||||| ||| ||  |||||||||||||||    
T  20519777 ctttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20519845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 25963360 - 25963422
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  25963360 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 25963422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 24316108 - 24316165
Alignment:
Q  50 gaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtt 107  Q
    |||||||| |||||||||||||| ||| ||  ||||||||||||||| ||||| ||||    
T  24316108 gaatatgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtt 24316165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 25109426 - 25109354
Alignment:
Q  28 ctttagatgcttt-tgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||| ||| |||||| ||||| |||| |||||||||||||| ||| ||  ||||||||||| ||||||    
T  25109426 ctttagatgatttctgagtgactgaacatgtataataatgattaggcaagtttttagattgagattcaacctg 25109354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 26392918 - 26392850
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||| ||||||||||| |||| ||| ||||| |||| ||||||  ||||||| |||||||    
T  26392918 ctttagatgatttcgagtgcctgaacatgtttaagaatgactaggtaagattttagattgaaattgaac 26392850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27263711 - 27263667
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  27263711 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 27263667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45677790 - 45677838
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  45677790 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 45677838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 19745 - 19407
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||| |||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||   |||    
T  19745 ttttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattt 19646  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaat 199  Q
      ||||||||||||    |||| ||||||||||||||| ||||| ||||||| ||          |   ||||| ||| |||| |||| ||| |||||||    
T  19645 tagaatgaatttttatgtgttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccagttacagaatgtcttgcttatgttaaat 19546  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataa 298  Q
    |||||| ||||||||||| ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| |||||||||||| ||| | ||  ||| |    
T  19545 gcgatccttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgatgttgttgtttcagtaaccctgatttaatatga 19446  T
Q  299 tctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| ||||||  |||| |||||||||||||||||||    
T  19445 tctaatgttgttgttaatggtatataattgtatatacat 19407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 48098 - 48164
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||| |||||||||||||||||| | ||||||| ||||||||| ||||| |||| || ||| |||||    
T  48098 tgtgattttgacttttgagatgaaccttagatgtttttgagtgtctgaagatgtatattaaagatta 48164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 28451 - 28735
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg-gaatagtt 107  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||| | ||    
T  28451 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactt 28550  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgccttgtttaggtt 195  Q
    ||| |||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||             ||||   || ||| |||||||||||||||||    
T  28551 tag-aatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagaatgccttgtttaggtt 28646  T
Q  196 aaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  28647 aaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 28735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 133132 - 132848
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat-agtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  133132 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactt 133033  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc------------tttgtccagtcacataatgccttgtttaggtt 195  Q
    ||| |||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||             |||||   | |||||||||||||||||||||    
T  133032 tag-aatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtc---ttacataatgccttgtttaggtt 132937  T
Q  196 aaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||| |||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||| ||||| ||||| |||||||    
T  132936 aaatgtgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttactgttgttgttccagtaag 132848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 62496 - 62338
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||||| ||||| ||||||| ||||||| | ||| ||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  62496 aatgccttgtttatgttaa-tgcgatccttgtcgcccgattcgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttc 62398  T
Q  279 agtaagcctaaattg-tataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| ||||| ||| | |||||  |||||  ||||||||||||||||||||||||    
T  62397 agtaagcctgaattgttatgaactaatgatgttgttaatgttatataattgtatatacat 62338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 292
Target Start/End: Original strand, 15472 - 15764
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||| |||||| || ||| | ||||||| |||||||||||| || |||| |||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  15472 ttttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaatagttt 15571  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||||| |||||| | | ||  || |||||||||||| ||||||||||||  ||           |  ||||| ||| ||||||||||||| |||||||    
T  15572 aagaatggatttttcggaattacacatgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtttatgttaaat 15671  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt 292  Q
    | |||||||||||||| | ||||||  |||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  15672 gtgatctttgtcgcacgagttgatgtgagttgatcttggagattagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaatt 15764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 130386 - 130102
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | || |||| ||||||||||||||| ||||||| | |||||||| |||||||  |||||||||||||||||||||||||||    
T  130386 ttttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagttt 130287  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||||| |||||||| | ||  |||| |||||||||| ||||| ||||||| ||           |  | ||| ||| ||||||||||||||| |||||    
T  130286 aagaatggatttttgggaattacacctaaactcgccatggcgagcagaggctctcgcctcgcgagctaactagttacaaaatgccttgtttaggataaat 130187  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||    
T  130186 gcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaag 130102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 60299 - 60395
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||  |||| ||||||||    
T  60299 ctttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttgg 60395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 215
Target Start/End: Complemental strand, 3411 - 3196
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3411 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 3312  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
    | ||| ||| || ||| ||||  ||||||||||||||| ||||||||||||  ||          ||| | ||| ||| |||||||||||||||||||||    
T  3311 aagaacgaacttgtgggagttatacctgaactcgccatggcgagtagaggccctcgcctcgtgaattgactagttacagaatgccttgtttaggttaaat 3212  T
Q  200 gcgatctttgtcgcac 215  Q
    ||||||||||||||||    
T  3211 gcgatctttgtcgcac 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 45431 - 45716
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtt 107  Q
    |||| ||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| || | ||    
T  45431 tttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactt 45530  T
Q  108 taggaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaa 197  Q
    || |||||||||||| || | ||| ||||||||||||||| ||||||||||||| ||           |  | ||| ||| |||| |||||||||| |||    
T  45531 ta-gaatgaattttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttaggataa 45629  T
Q  198 atgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    |||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||| ||||||| |||||| |||||||    
T  45630 atgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatattgctgtaattgttccagtaag 45716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 161164 - 160880
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||    
T  161164 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 161065  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    || |||||||||||||  |  |||||||||| ||||||| ||||||||||||| ||           |  | ||| ||| |||| |||| ||||| ||||    
T  161064 ta-gaatgaatttttgtgaactgaacctgaagtcgccatggcgagtagaggctctcacctcacgaggtaactagttacagaatgtcttggttaggataaa 160966  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    || |||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| ||||||| |||||    
T  160965 tgtgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgtttcggtaag 160880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 447009 - 446965
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||| ||||| ||||||||| |||| ||||||||||||||    
T  447009 ctttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 497940 - 497896
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||| ||||| ||||||||| |||| ||||||||||||||    
T  497940 ctttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 2445 - 2731
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||| ||||| | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||   |||    
T  2445 ttttgacttttgggatgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattt 2544  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgccttgtttaggtta 196  Q
      ||||||| |||  | | | ||||||||||||||||| ||||||||||||| ||             ||||   || ||| |||||||||||||||  |    
T  2545 tagaatgaaatttgtgaact-gaacctgaactcgccatggcgagtagaggctctcgcctcgcgagtacttgt---gttacagaatgccttgtttaggaaa 2640  T
Q  197 aatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    |||| |||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  2641 aatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcct 2731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 91; Significance: 5e-44; HSPs: 5)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 13068 - 12910
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||  |||||||||| |||||||||||||||||  |||||||||||||| ||||| |    
T  13068 aatgccttgtttaggttaaatgcaatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagtggtttatcttgctgttgttgttcc 12969  T
Q  279 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| |||| ||| ||||||| |||||   ||||||||||||||||||||||||    
T  12968 agtaagcctgaattatatgatctaatgttgttattaatgttatataattgtatatacat 12910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6066 - 5996
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  6066 ttctgtgtttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 5996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7261 - 7191
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  7261 ttctgtgtttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 7191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 13303 - 13233
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||| || || |||||||||||| |||| | |||||||||||| ||| ||  |||||||||||||||||    
T  13303 ctttagttgtttatgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 13233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 8247 - 8191
Alignment:
Q  43 agtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||| |||| | |||||||||||| ||| ||  ||||||||||||||||||    
T  8247 agtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 8191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 32562 - 32288
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat-agtt 107  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  32562 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactt 32463  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaa 198  Q
    ||| |||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||          |  |   || ||||||||||||||||||||||||    
T  32462 tag-aatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcacctcgcgagtacttgtgttacataatgccttgtttaggttaaa 32364  T
Q  199 tgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||          |||||||||||| |||||||||||||||||| |||||||| ||||| ||||| |||||||    
T  32363 tgcgatctttgtcgca----------ctagttgatcttagaggttagaaactaagttgtttatcttactgttgttgttccagtaag 32288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 90; Significance: 2e-43; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 39863 - 40152
Alignment:
Q  58 ctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagag 157  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||| ||| || ||| ||||  ||||||||| ||||| || |||||||    
T  39863 ctaataatggttaggaaagattggagattgacattcaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccatggcaagtagag 39962  T
Q  158 gctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaa 248  Q
    ||| ||           |  | ||| ||| |||||||| ||||||||||||||||||||||| |||| | ||||||  |||||||||| |||||||||||    
T  39963 gctctcgcctcgcgagctaactagttacaaaatgccttatttaggttaaatgcgatctttgttgcacgagttgatgtgagttgatcttagaggttagaaa 40062  T
Q  249 ctaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||| |||| |||| |||| |||||||||||||||| ||||  ||| |||| || ||||||  |||| |||||||||||||||||||    
T  40063 ctaagttgtttaccttgatgttgttgtttcagtaagcctgaattaatatgatcttatgttgttgttaatggtatataattgtatatacat 40152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 100676 - 100517
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||||| || ||||||||||||||||||||||| | ||||||  | ||| |||| |||||||||||||||||| ||||||||| |||| |||||||    
T  100676 aatgccttgtctaagttaaatgcgatctttgtcgcacgagttgatgtgacttgctcttagaggttagaaactaagttgtttatcttgttgttgttgtttc 100577  T
Q  279 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||||||||  ||| ||||||| ||||||  ||||||||||||||||||||||||    
T  100576 agtaagcctaaattaatatgatctaatgttgttgttaatgttatataattgtatatacat 100517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 101873 - 101723
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtt 107  Q
    |||| ||||||||| ||| | ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||    
T  101873 tttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 101774  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    || |||||||||||  | | ||| ||||||||||||||| ||||| |||||||    
T  101773 ta-gaatgaattttgtgaacttg-acctgaactcgccatggcgagcagaggct 101723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 101690 - 101619
Alignment:
Q  184 cttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 255  Q
    ||||||||||||||||| |||| ||||||||| | ||||||  |||||||||| ||||||||||||||||||    
T  101690 cttgtttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagtt 101619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 9563 - 9404
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || ||| |||||||| ||||||    
T  9563 ttctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctgg 9464  T
Q  101 -aatagtttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
     || |||||| |||||||||||||  |  |||||||||||||||||| |||||||||||||    
T  9463 aaagagttta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggct 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 2037 - 2196
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  2037 aatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaaataagttgtttatcttgctgttgttgtttc 2136  T
Q  279 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| | ||  ||| ||| ||| ||||||  |||| |||||||||||||||||||    
T  2137 agtaagcctgatttaatatgatccaatgttgttgttaatggtatataattgtatatacat 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 337
Target Start/End: Original strand, 14506 - 14675
Alignment:
Q  169 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 268  Q
    ||||| ||| ||||||||||||||| ||||||||||||| ||||||||| ||||||  |||||||||| |||||||||||||||||| | ||||||||||    
T  14506 ccagttacagaatgccttgtttaggataaatgcgatcttggtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtatatcttgctg 14605  T
Q  269 ttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    || |||||||||||||||| | ||  ||| ||||||| || |||  |||| |||||||| ||||||||||    
T  14606 ttgttgtttcagtaagcctgatttaatatgatctaatgtttttgttaatggtatataatagtatatacat 14675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 30388 - 30450
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || || | |||||| ||||||    
T  30388 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatctttaataaagattag 30450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 276
Target Start/End: Complemental strand, 609 - 334
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||  ||| | |||||   |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||||   |||    
T  609 ttttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattt 510  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaat 199  Q
      |||||||||||||  ||||| ||||||||||||||| ||||| ||||||| ||          |   ||||| ||| |||| |||| ||| |||||||    
T  509 tagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttgcttatgttaaat 410  T
Q  200 gcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 276  Q
    ||||||||||||| || | ||||||  |||||||||| ||||||||||||| ||||  ||||||||||||| |||||    
T  409 gcgatctttgtcgtacgagttgatgtgagttgatcttagaggttagaaactgagtt-gttatcttgctgttgttgtt 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 281
Target Start/End: Original strand, 7720 - 7979
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| ||||||||| ||||| |||| ||||||||||||||||||||   ||| ||||||||||||| |||||||||| ||||||||||||||  |||    
T  7720 ttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatgaatttttgggggtt 7819  T
Q  130 gaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaattt 220  Q
      ||||||||||||||||||||||||||||| ||          ||  |  ||  || |||||||||  |||||||||||||||||||||||||  | ||    
T  7820 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccttgttccagaatgccttg-ctaggttaaatgcgatctttgtcgcaagaatt 7918  T
Q  221 gatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagt 281  Q
    ||||  |||||||||| |||||  ||||||||||| |||||||||||| | ||||| ||||    
T  7919 gatgtgagttgatcttagaggtatgaaactaagttgtttatcttgctgatgttgttccagt 7979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 169 - 337
Target Start/End: Original strand, 7886 - 8050
Alignment:
Q  169 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 268  Q
    ||||| ||| ||||||||||| ||| ||||||||||||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||||    
T  7886 ccagttacaaaatgccttgtt-agggtaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctg 7984  T
Q  269 ttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
       |||||||||||||||| |||| ||| || |||| ||||||  ||||||||||| ||||||||||||    
T  7985 ---ttgtttcagtaagcctgaattatatgatttaatgttgttgataatgttatatagttgtatatacat 8050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 28922 - 29011
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||| | ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||    
T  28922 ttttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 29100 - 29204
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  29100 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 29198  T
Q  279 agtaag 284  Q
    ||||||    
T  29199 agtaag 29204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 7682 - 7763
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    |||||||| | ||||||||||||||| ||| || ||||||||||| | | ||  ||||||||||||||||||| | ||||||    
T  7682 ctttagatacctttgagtgcctgaatctgtatattaatgattaggcacgtttttagattgagattgaacctgggaaagttta 7763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 43447 - 43577
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||||||  |||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  43447 ttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagtt 43546  T
Q  130 gaacctgaactcgccatagcgagtagaggct 160  Q
      ||||| |||||||||  ||||||||||||    
T  43547 acacctgtactcgccatgacgagtagaggct 43577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 47367 - 47497
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagtt 129  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||||||  |||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  47367 ttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagtt 47466  T
Q  130 gaacctgaactcgccatagcgagtagaggct 160  Q
      ||||| ||| |||||  ||||||||||||    
T  47467 acacctgtactagccatgacgagtagaggct 47497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 6072 - 5964
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||||| || ||| | ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6072 ttttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaatagttt 5973  T
Q  109 aggaatgaa 117  Q
    | |||||||    
T  5972 aagaatgaa 5964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 5944 - 5786
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||| |||||| |||  ||||||||||| ||||||  |||||||||| ||||||| |||||||||| ||||||||| |||| |||||||    
T  5944 aatgccttatttaggctaaatgtgattcttgtcgcacaagttgatgtgagttgatcttagaggttaaaaactaagtt-tttatcttgttgttgttgtttc 5846  T
Q  279 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    ||||||||| ||||  ||| ||||||| ||||||  |||| |||||||||||||||||||    
T  5845 agtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatatacat 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 704 - 799
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  704 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 63039 - 62913
Alignment:
Q  10 tttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagttt 108  Q
    ||||||||||||| ||| | ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||    
T  63039 tttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatatttt 62940  T
Q  109 aggaatgaatttttggtagttgaacctg 136  Q
    | |||||||||||||  ||||| |||||    
T  62939 a-gaatgaatttttgtgagttgcacctg 62913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 337
Target Start/End: Original strand, 136196 - 136345
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  136196 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 136295  T
Q  289 aattgtat-aatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||| ||| | | |||| ||||||  ||||||||||| ||||||||||||    
T  136296 aattatatgattttaatgttgttgttaatgttatatagttgtatatacat 136345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 337
Target Start/End: Original strand, 144904 - 145053
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  144904 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 145003  T
Q  289 aattgtat-aatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||| ||| | | |||| ||||||  ||||||||||| ||||||||||||    
T  145004 aattatatgattttaatgttgttgttaatgttatatagttgtatatacat 145053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 125061 - 124993
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaaga 77  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  125061 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 124993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 135965 - 136048
Alignment:
Q  41 tgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||| |||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||||||||||||    
T  135965 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgg 136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 144673 - 144756
Alignment:
Q  41 tgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||| |||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||||||||||||    
T  144673 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgg 144756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 18595 - 18693
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  18595 tgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 12407 - 12257
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||  ||| | ||||||||||||||||| |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| ||  ||    
T  12407 ttttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-att 12309  T
Q  109 aggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| ||||||| |  || ||||||||||||||| |||||||||||||    
T  12308 aagaatgaactttttggaaactg-acctgaactcgccatggcgagtagaggct 12257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 15257 - 15408
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatag-tt 107  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| |||| |||| ||    
T  15257 ttttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctgg-atagatt 15355  T
Q  108 taggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    |  |||||||  ||||| | |   ||||||||||||||||||||| |||||||    
T  15356 ttagaatgaaactttgggaatctgacctgaactcgccatagcgagcagaggct 15408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 189 - 337
Target Start/End: Complemental strand, 12860 - 12712
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | | ||||  |||||||||| ||||| | |||||||||| |||||||||||||| ||||||||||||| |||    
T  12860 ttaggttaaatgtgacctttgtcgcacgagtggatgtgagttgatcttagaggtaataaactaagttgtttatcttgctgttgttgtttcagtaagtcta 12761  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |  ||||| || | || |||||   ||||| ||||||||||||||||||    
T  12760 atgtgtattatttgatgttgtttataatgtgatataattgtatatacat 12712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 13104 - 13008
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| ||||||||||||||  |||| || ||||||||||| ||| ||  ||||||||||||||||||  | ||||||  |||| ||||||||    
T  13104 ctttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 13008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 16854 - 16950
Alignment:
Q  6 tgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||||| ||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  16854 tgtttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 79007 - 79096
Alignment:
Q  12 tgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    ||||||||||| ||| | |||||||||||||||||| |||| |||| |||||||||||||||| || || ||| ||||||||||||||||    
T  79007 tgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 337
Target Start/End: Original strand, 103467 - 103615
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||||||||     
T  103467 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttctttatcttcctgttgttgtttcagtaagcctg 103566  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||| ||| || |||| ||||||  |||||||| || ||||||||||||    
T  103567 aattatatgatttaatgttgttgttaatgttatgtagttgtatatacat 103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 103257 - 103340
Alignment:
Q  41 tgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||||||||||||    
T  103257 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgg 103340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 5759 - 5854
Alignment:
Q  5 gtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||| ||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||    
T  5759 gtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgg 5854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 604 - 695
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||    
T  604 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctgg 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 34600 - 34509
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  34600 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 34509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 13571 - 13485
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaa 95  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||| |||||||||||||| || ||  ||||||||||    
T  13571 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaa 13485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 34425 - 34317
Alignment:
Q  175 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 274  Q
    ||||||| |||| |||||||| |||||||||||||| |  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |     
T  34425 acataattcctt-tttaggttgaatgcgatctttgttgttctagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatt 34327  T
Q  275 tttcagtaag 284  Q
    || |||||||    
T  34326 ttccagtaag 34317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 32601 - 32752
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||||||||  || | ||||||||||||||||| ||||| ||||||||||||||||||||| || |||||| |||||||||||||| ||   |||    
T  32601 ttttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattt 32700  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||||||||  ||||| |||  ||||||||| |||||| |||||||    
T  32701 tagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggct 32752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 46404 - 46253
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||||||||  || | ||||||||||||||||| ||||| ||||||||||||||||||||| || |||||| |||||||||||||| ||   |||    
T  46404 ttttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattt 46305  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
      |||||||||||||  ||||| |||  ||||||||| |||||| |||||||    
T  46304 tagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggct 46253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 16565 - 16473
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||  ||||||||||||||||| |||||||||||||||||||||||| || ||   ||||||||||||||||    
T  16565 ttttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaa 16473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 160
Target Start/End: Original strand, 20069 - 20218
Alignment:
Q  10 tttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||||||||| ||| | |||||||||||||||| |||||| |||| ||||||||| ||||||||| || ||| |||||||||||||||| ||  |||    
T  20069 tttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggatta-atta 20167  T
Q  110 ggaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
     ||||||| ||||||| || || ||||||||||||||| |||||||||||||    
T  20168 agaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggct 20218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 1942 - 2207
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct-ggaatagt 106  Q
    ||||||||||||||| ||| | ||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||| |   || | |    
T  1942 tttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagact 2041  T
Q  107 ttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggttaa 197  Q
    ||| ||||||| |||||  |  |||||||||||||||||| || || ||||||| ||          |  |   || ||| |||||||||||||||||||    
T  2042 tta-gaatgaaattttgtgaactgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggttaa 2140  T
Q  198 atgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatctt 264  Q
    |||||||| ||||||||| | | ||||  |||| ||||| |||||||||||||||||| ||||||||    
T  2141 atgcgatccttgtcgcacgagtggatgtgagttaatcttagaggttagaaactaagttgtttatctt 2207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 284
Target Start/End: Original strand, 10284 - 10465
Alignment:
Q  111 gaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgc 201  Q
    |||||||||||||  ||||  |||||||||||||| |||||||||||||| ||          |||||| || ||||| ||||||||| |||||||||||    
T  10284 gaatgaatttttgtgagttacacctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttgtt-aggttaaatgc 10382  T
Q  202 gatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||| |||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| ||||| |||||||    
T  10383 gatctttgttgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttccagtaag 10465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 10210 - 10280
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagatt 79  Q
    ||||||| |||||||||| | ||||||| ||||||||||||||| |||||||||||||||||| |||||||    
T  10210 ttttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagatt 10280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 1059 - 994
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattagga 73  Q
    ||||||||||||||| ||| | |||||||  |||||||||  ||| |||||||||| |||||||||    
T  1059 tttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattagga 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 3949 - 3855
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  3949 ttttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 821 - 732
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||| |||||||||||||    
T  821 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 63; Significance: 2e-27; HSPs: 5)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 16137 - 16047
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  16137 ttttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 15959 - 15802
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||  ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| || | |    
T  15959 aatgcctt-tttaggtggaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgatcc 15861  T
Q  279 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| || | |  ||| |  |||| ||| |   ||||||||||||||||||||||||    
T  15860 agtaagactgattcttatgaaataatgttgcttataatgttatataattgtatatacat 15802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 17937 - 17999
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||||||| ||||||||| |||||||||||||| ||| ||  |||||||||||| ||||||    
T  17937 ttttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattggacctgg 17999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 1816 - 1755
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  1816 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtttattaaagatta 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 18163 - 18196
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcg 212  Q
    ||||||||||||||||||||||| ||||||||||    
T  18163 aatgccttgtttaggttaaatgcaatctttgtcg 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 2727 - 2820
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  2727 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 2820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1712 - 1812
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||    
T  1712 ttctgtgattttgacttttgagttgatccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 1810  T
Q  101 aa 102  Q
    ||    
T  1811 aa 1812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 20882 - 20789
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  20882 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 20789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 4987 - 4894
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  4987 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 4894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 12569 - 12476
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  12569 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 12476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 22521 - 22428
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  22521 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 22428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18278 - 18326
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    ||||| |||||||||||||||| ||| | ||||||| ||||||||||||    
T  18278 ttctgagtttttgacttttgagttgaaccttagatgtttttgagtgcct 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 16241 - 16334
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||| |||||||||||||||||    
T  16241 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaa 16334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 40335 - 40242
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| |  |||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||||||||||    
T  40335 ttttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaa 40242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 39573 - 39666
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||||||||||| |||||| ||||||| |||||||||||||||| || ||| |||||||||||||||||    
T  39573 ttttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 39666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 59179 - 59235
Alignment:
Q  43 agtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||| |||||||||||||||||||| ||| || ||| ||||||||||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctg 59235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 26659 - 26611
Alignment:
Q  54 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||||||||||||| || ||  ||||||| |||||||||    
T  26659 atgtctaataatgattaggaaagaatgtaggatgagattaaacctggaa 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 2330 - 2237
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  2330 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 2237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 207159 - 207254
Alignment:
Q  7 gtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||| ||| || ||  |||||||||||||||||    
T  207159 gtttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaa 207254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 119214 - 119280
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  |||||||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaac 119280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 207339 - 207375
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    ||||| |||||||||||||||||||||||||||||||    
T  207339 aatgctttgtttaggttaaatgcgatctttgtcgcac 207375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 52391 - 52298
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  52391 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 52298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 167632 - 167721
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  |||||||||||||    
T  167632 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 37738 - 37806
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||| |||||||| ||| |||||||||||||| ||  ||||||| |||||||    
T  37738 ctttagatgattttgagtgccagaatatgtataagaatgattaggaaagtttttagattgaaattgaac 37806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 17259 - 17167
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  17259 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 17167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 227951 - 227851
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||| ||| |||||||||||| || |||| |||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||| |||    
T  227951 tttaaatgattttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagt 227852  T
Q  129 t 129  Q
    |    
T  227851 t 227851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 4783 - 4878
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  4783 tttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 10078 - 10173
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  10078 tttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 13964 - 13869
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||  || ||  ||||||||||||||||||    
T  13964 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctggaat 13869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 1383 - 1226
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    ||||||||||| ||||||||||||||||||||| ||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||| ||||| |    
T  1383 aatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatcttagaggtaagaaactaagttttttatcttgttgttgttgttcc 1285  T
Q  279 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacat 337  Q
    |||||| || |  | ||| || | || ||||||  ||||||||||| ||||||||||||    
T  1284 agtaagactgatgtatatgatttgatgttgttgttaatgttatatagttgtatatacat 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 8959 - 8865
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||||| || ||  |||||||||||||    
T  8959 tgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacct 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 5316 - 5222
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  5316 ttttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 5222  T

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Target: scaffold0358 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 404 - 310
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||| |||||||    
T  404 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 5180 - 5086
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||| |||||||    
T  5180 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 5086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 12454 - 12329
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttggtagt 128  Q
    |||||||| ||||||||| ||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||| |||||| | |||    
T  12454 tttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaatag-ttaagaatggattttttggagt 12356  T
Q  129 tgaacctgaactcgccatagcgagtag 155  Q
    |  | ||||| | ||||||||||||||    
T  12355 tacaactgaatttgccatagcgagtag 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 2087 - 2177
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||| ||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||    
T  2087 ttttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 2265 - 2369
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 278  Q
    |||||||| |||||||| ||||||||||||| ||  | | || |||  |||||||||| |||||||||||||||||| |||| |||||| ||| |||| |    
T  2265 aatgcctt-tttaggttgaatgcgatctttgccgttcgagtttatgtgagttgatcttagaggttagaaactaagttttttaccttgctattaatgttcc 2363  T
Q  279 agtaag 284  Q
    ||||||    
T  2364 agtaag 2369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 25704 - 25858
Alignment:
Q  6 tgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatag 105  Q
    ||||||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||| ||       
T  25704 tgtttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaaga 25803  T
Q  106 tttaggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    ||   |||||||||||||| | |   ||||||||||||||  ||||| |||||||    
T  25804 ttgtagaatgaatttttggaaatctgacctgaactcgccacggcgagcagaggct 25858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 33136 - 33229
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| ||||||||| ||| | |||||||||| |||||||||| | |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  33136 ttttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 33229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 12451 - 12544
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||||||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  12451 ttttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 12544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 39238 - 39145
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||||  || ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  39238 ttttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 39145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 20591 - 20498
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    ||||||||| |||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| | |||||||||||||||    
T  20591 ttttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaa 20498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 17650 - 17742
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgga 101  Q
    |||||||||||||| | | | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||    
T  17650 ttttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 17742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 15117 - 15213
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaata 104  Q
    |||||||||||| || ||| |  ||||||||||||||||||| ||||||||||||||||||||||||||| || ||  |||||||||||||||||||    
T  15117 tttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaata 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 32917 - 32968
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtct 59  Q
    ||||||||||||||| ||| | |||||||||||||| |||||||| ||||||    
T  32917 tttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgtct 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7774 - 7705
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| |||||||| |||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  7774 ttctgtatttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 7705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 47452 - 47360
Alignment:
Q  11 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||| || || ||  ||||||||||||||||||    
T  47452 ttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctggaat 47360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 64305 - 64367
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  64305 tttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 64367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 6470 - 6557
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||||||||||||| | |||||||| ||| |||||||||| |||||||||||||||||||||||| || ||| |||||||||||    
T  6470 ttttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 29015 - 28924
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||||||||||  || | |||||||||||||||| |||||| |||||||||||||||||||||||| || ||| |||||||||||||||    
T  29015 ttttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 1368 - 1460
Alignment:
Q  32 agatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||| ||||||||||||||| |||| || ||||||||||  ||| ||  ||||||||||||||||||  | ||||||  |||| ||||||||    
T  1368 agatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 1460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 32533 - 32438
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||  |  ||||||||||||||||||    
T  32533 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctggaat 32438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1390 - 1288
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||| ||||||||||||||| ||| | |||||||| |||||||||||||| ||  |||||||||||||||||||| || ||  |||||||||||||||    
T  1390 ttctgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctgg 1291  T
Q  101 aat 103  Q
    |||    
T  1290 aat 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 13250 - 13340
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||| ||||    
T  13250 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctg 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 11170 - 11260
Alignment:
Q  13 gacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  11170 gacttttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 14097 - 14027
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||| ||||||    
T  14097 ttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctgg 14027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 13679 - 13585
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||  ||||| ||||||||||||    
T  13679 ttttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaat 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 7931 - 8029
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  7931 tgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 8029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 53132 - 53213
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||||| ||||||||||||||| | || |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||    
T  53132 ctttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagttta 53213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 8114 - 8150
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  8114 aatgccttgtttaggttaaatgcgatctttgtcgcac 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 53393 - 53525
Alignment:
Q  205 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 304  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||  ||||  |||| ||||||| || |  | ||| || | ||    
T  53393 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgat 53492  T
Q  305 attgttgcgaatgttatataattgtatatacat 337  Q
     |||||   ||||| ||||||||||||||||||    
T  53493 gttgtttataatgtgatataattgtatatacat 53525  T

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Target: scaffold1842 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 702 - 791
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  |||||||||||||    
T  702 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 791  T

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Target: scaffold0627 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 383 - 290
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  383 ttttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 290  T

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Target: scaffold0121 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 8175 - 8267
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  8175 ttttgacttttgagttgatcctt-gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 8267  T

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Target: scaffold0042 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 23944 - 24037
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||||||| | || ||  |||||||||||||||||    
T  23944 ttttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 24037  T

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Target: scaffold0003 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 339593 - 339686
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||| |||||||||||||||||||| |||||||||||||||||||| || || ||  |||||||||||||||||    
T  339593 ttttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaa 339686  T

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Target: scaffold1351 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 333
Target Start/End: Complemental strand, 298 - 154
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||||| ||||||  |||||||| ||| ||| ||||||||||||   |||||| ||||| |||||||||||||||||    
T  298 ttaggttaaatgtgacctttgtcgcacaagttgatgtgagttgatcatgggggtaagaaactaagttgcatatcttactgttgttgtttcagtaagccta 199  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    ||||  || || | || |||||   |||||||||||| |||||||    
T  198 aattaaatgatttgatgttgttaataatgttatataaatgtatat 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 542 - 446
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||| |||| |||||||||| ||||||||| |||||||||||| | ||| ||  ||||||||||||||||||  | ||||||  |||| ||||||||    
T  542 cttttgatgattttgagtgcttgaatatgtataataatgattacgcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 446  T

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Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 128555 - 128651
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||| ||| |  |||||||||||||||||||||| ||||||  |||| ||||||||    
T  128555 ctttagatgattttaagtgcctgaatatgtataataatgattaggcaagttatgagattgagattgaacctggaaaagtttataaatggatttttgg 128651  T

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Target: scaffold0022; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 80798 - 80702
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  80798 ctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 80702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 333
Target Start/End: Complemental strand, 78614 - 78470
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||  | ||||||  |||||||| ||| ||| || |||||||||  ||||||| ||||| ||||||||||||||||     
T  78614 ttaggttaaatgtgacctttgtcgcatgagttgatgtgagttgatcatgggggtaagcaactaagttgcttatcttactgttgttgtttcagtaagcctg 78515  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| || | || |||||   ||||| |||||| |||||||    
T  78514 aattatatgatttgatgttgttaataatgtgatataaatgtatat 78470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 128837 - 128896
Alignment:
Q  227 agttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    |||||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||    
T  128837 agttgatcatgg-ggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcct 128896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 24183 - 24262
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||| |||||||||||||||||| | |||||||||||||| ||| ||  ||||||||||||||||||||||||||||    
T  24183 ttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaatagttta 24262  T

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Target: scaffold0351 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 16747 - 16657
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||||| || ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||   |||||||||||||    
T  16747 ttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctg 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3957 - 3855
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||| ||||||||||||||| ||| | |||||||  |||||||||||||| ||| ||| |||||||||||||||| || ||  |||||||||||||||    
T  3957 ttctgtatttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctgg 3858  T
Q  101 aat 103  Q
    |||    
T  3857 aat 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8021 - 7919
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    |||||| ||||||||||||||| ||| | |||||||  |||||||||||||| ||| ||| |||||||||||||||| || ||  |||||||||||||||    
T  8021 ttctgtatttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctgg 7922  T
Q  101 aat 103  Q
    |||    
T  7921 aat 7919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 27303 - 27399
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  || |||||||||||||||| | | |||| ||||| ||||||||    
T  27303 ctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgggaaattttaagaatggatttttgg 27399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 23361 - 23268
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || ||  |||||||| | ||||||    
T  23361 ttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaa 23268  T

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Target: scaffold0540 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 650 - 741
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaa 95  Q
    |||| ||||||| || ||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||    
T  650 tgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 2421 - 2326
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||||  ||||||||||| |||||||| || || ||  ||||||||||||||||||    
T  2421 tttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctggaat 2326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 7079 - 6984
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||||  ||||||||||| |||||||| || || ||  ||||||||||||||||||    
T  7079 tttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctggaat 6984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 25641 - 25546
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||| ||||| ||||||  |||| ||||||||    
T  25641 tttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtttaaaaatggatttttgg 25546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 40390 - 40240
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| || ||||||||||||| || || ||  ||||||||||||||  | | | |    
T  40390 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctgacagattgt 40291  T
Q  109 aggaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 160  Q
    | ||||||| |||||| | |   ||||||||||||||  |||||||||||||    
T  40290 a-gaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggct 40240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 19713 - 19809
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagc 285  Q
    |||||||||||| || |||||||||||   |||||   |||||||||||| ||| ||||||||||||  ||||||| ||||| ||||| ||||||||    
T  19713 ttaggttaaatgtgacctttgtcgcacgggttgatatgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttccagtaagc 19809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 7189 - 7095
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttg 123  Q
    |||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| |||||||    
T  7189 tttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttg 7095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 10394 - 10296
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||| |||||||||||||| ||| | |||||||| ||||||||||| || ||||||| || ||||||||||||| || ||  |||||||||||||||||    
T  10394 tgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaa 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 10211 - 10178
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcg 212  Q
    ||||||||||||||||||||||||||||||||||    
T  10211 aatgccttgtttaggttaaatgcgatctttgtcg 10178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 21369 - 21275
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    |||||||||||||| ||| | ||||||| |||| |||||||||| ||||||||||||||||| |||||| || ||  |||||||| |||||||||    
T  21369 ttttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctggaat 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 4997 - 4912
Alignment:
Q  14 acttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||| ||| | |||||||||||||||||||| || ||||||| |||||| |||| ||||||| ||| ||||||||||||||    
T  4997 acttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctg 4912  T

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Target: scaffold0037 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 22509 - 22598
Alignment:
Q  195 taaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 284  Q
    ||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||| ||||| ||||  |||| |||||||    
T  22509 taaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttgtcttgatgttgctgttccagtaag 22598  T

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Target: scaffold0037; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 79974 - 80067
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||| ||| | ||| ||||  ||||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  79974 ttttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 80067  T

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Target: scaffold0037; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 80152 - 80188
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    ||||||||||||||||||||||||||||| |||||||    
T  80152 aatgccttgtttaggttaaatgcgatcttcgtcgcac 80188  T

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Target: scaffold0357 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 13667 - 13571
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||||| || | |||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | |||||| ||||| ||||||||    
T  13667 ctttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaagaatggatttttgg 13571  T

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Target: scaffold0357; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 3228 - 3134
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaatttttgg 124  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||  |||| ||||||||    
T  3228 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttgg 3134  T

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Target: scaffold0151 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 10623 - 10555
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaaga 77  Q
    ||||||| |||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  10623 ttttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaaga 10555  T

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Target: scaffold0004 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 332852 - 332784
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||| ||  |||||||||||||||    
T  332852 ctttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 70272 - 70211
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  70272 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 70211  T

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Target: scaffold0423 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 10913 - 10970
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataat 65  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||    
T  10913 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

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Target: scaffold0347 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 506 - 414
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||||||  ||| | |||||||| || ||||||||||| |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  506 ttttgacttttgaattgaaccttagatgcctt-gagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 414  T

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Target: scaffold0347; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 329 - 293
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  329 aatgccttgtttaggttaaatgcgatctttgtcgcac 293  T

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Target: scaffold0347; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 9424 - 9356
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||  ||| ||  ||||||| |||||||    
T  9424 ctttagatgattttgagtgcctgaatatgtataagaatgattagacaagtttttagattgaaattgaac 9356  T

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Target: scaffold0166 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 9480 - 9569
Alignment:
Q  13 gacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 102  Q
    |||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||| |||||| || ||  |||||||||| ||||||    
T  9480 gacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaa 9569  T

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Target: scaffold0166; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 9654 - 9690
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcac 215  Q
    |||||||||||||||||||||| ||||||||||||||    
T  9654 aatgccttgtttaggttaaatgtgatctttgtcgcac 9690  T

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Target: scaffold0420 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 6111 - 6255
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  || ||||| ||| ||| ||||||||||||  ||||||  ||||| ||||||||||||||||     
T  6111 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatctcactgttgttgtttcagtaagcctg 6210  T
Q  289 aattgtataatctaatattgttgcgaatgttatataattgtatat 333  Q
    |||| ||| || | || |||||   ||||| |||||| |||||||    
T  6211 aattatatgatttgatgttgttattaatgtgatataaatgtatat 6255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 5916 - 5987
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||| ||| ||  ||||| || |||||||||    
T  5916 ctttagatgattttgagttcctgaatatgtataataatgattaggcaagtttttagattaagtttgaacctg 5987  T

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Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 38831 - 38752
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttta 109  Q
    ||||||| || ||||||| ||||||||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||    
T  38831 ttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagttta 38752  T

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Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 38607 - 38507
Alignment:
Q  192 ggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaat 291  Q
    ||||||||| || |||| |||||| | ||||||  ||||||||  || ||| ||||||||||||  ||||||| ||||| |||||||||||||||| |||    
T  38607 ggttaaatgagacctttatcgcacgagttgatgtgagttgatcacgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctgaat 38508  T
Q  292 t 292  Q
    |    
T  38507 t 38507  T

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Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 52048 - 51953
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 103  Q
    ||||| ||||||||| | | | || ||||| |||||||||||||| | |||||||||||||||||||||| || ||   |||||||||||||||||    
T  52048 ttttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaat 51953  T

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Target: scaffold0124 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 24292 - 24382
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    ||||||||||||||| | | | ||||||||  ||||||||||||| |||||||||| ||||||||||||| |  ||  |||||||||||||    
T  24292 tttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacct 24382  T

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Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 29219 - 29149
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctgg 100  Q
    ||||||| |||||||||||||||||| | |||||||||||||| ||| ||  |||||||||||| ||||||    
T  29219 ttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctgg 29149  T

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Target: scaffold0098; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 26889 - 26855
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgc 213  Q
    |||||||||||||||||||||| ||||||||||||    
T  26889 aatgccttgtttaggttaaatgtgatctttgtcgc 26855  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 268188 - 268094
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaattttt 122  Q
    ||||||||| || | |||||||||| |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||    
T  268188 ctttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggattttt 268094  T

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Target: scaffold0327 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 749 - 680
Alignment:
Q  2 tctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    ||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  749 tctgtatttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 680  T

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Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 11591 - 11494
Alignment:
Q  179 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 276  Q
    |||||| | |||||||| ||||||||||||||||  | | ||||||  |||| ||||| |||||||||||||||||| |||| |||| ||||| ||||    
T  11591 aatgccctttttaggttgaatgcgatctttgtcgttcgagttgatgtgagttaatcttagaggttagaaactaagttgtttaccttggtgttaatgtt 11494  T

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Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 19252 - 19320
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| |||||| ||||||||||||| ||| |||||||||| ||| ||  |||||||||||||||    
T  19252 ctttagatgattttgaatgcctgaatatgtgtaagaatgattaggcaagtttttagattgagattgaac 19320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 1755 - 1692
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||| |  ||| | ||||||||||||| ||||||||| |||||||||| |||||||    
T  1755 tttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 7732 - 7669
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||| |  ||| | ||||||||||||| ||||||||| |||||||||| |||||||    
T  7732 tttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 7669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 10637 - 10569
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaaga 77  Q
    |||||||||||||| ||| | |||||||||||||||||||| || ||| ||| || |||||||||||||    
T  10637 ttttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaaga 10569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 206109 - 206189
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 108  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| | ||| ||  ||||||| ||||||| ||||| |||||    
T  206109 ctttagatgattttgagtgcctgaatatgtataagaatgattaagcaagtttttagattgaaattgaacttggaaaagttt 206189  T

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Target: scaffold1403 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 841 - 739
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| |   ||| |||||||||||| |||||||  ||||| ||||||||||||||||     
T  841 ttaggttaaatgagacctttgtcgcacgagttgatgtgagttgatcatat-ggtaagaaactaagttgtttatctaactgttgttgtttcagtaagcctg 743  T
Q  289 aatt 292  Q
    ||||    
T  742 aatt 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 1075 - 992
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaggaatgaattttt 122  Q
    |||||||||||||||| ||| |||||||||||||| ||  ||  ||||||||||||||||||| | ||||||  |||| ||||||    
T  1075 ttttgagtgcctgaatgtgtataataatgattaggcaa-tttttagattgagattgaacctgggaaagtttaaaaatggattttt 992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 2934 - 3001
Alignment:
Q  29 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||||| |||||||||||| ||||| | |||||||||||||| ||| ||  |||||||||||||||    
T  2934 tttagatggttttgagtgccttaatatatataataatgattaggcaagtttttagattgagattgaac 3001  T

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Target: scaffold2080 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 346 - 412
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattga 94  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||||||| |||||    
T  346 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagttttaagattgaaattga 412  T

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Target: scaffold0586 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 2311 - 2245
Alignment:
Q  30 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||| ||||||||||||||| |||   | ||||||||||||||||||| ||| |||||||||||    
T  2311 ttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

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Target: scaffold0367 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 1369 - 1307
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || ||||||| ||| ||||||    
T  1369 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtctattaaagattag 1307  T

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Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 35541 - 35594
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagat 91  Q
    |||||||||||||||||||| |||||||||||||| ||| ||  ||||||||||    
T  35541 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagat 35594  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 97297 - 97201
Alignment:
Q  190 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    |||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  || |||| ||||| ||||||||||||||||    
T  97297 taggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcct 97201  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 106575 - 106479
Alignment:
Q  190 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 287  Q
    |||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  || |||| ||||| ||||||||||||||||    
T  106575 taggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcct 106479  T

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Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 97542 - 97498
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||| |||||| |||||||||||||  |||||||||||||    
T  97542 ctttagatgattttgaatgcctgaatatgtacaataatgattagg 97498  T

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Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 106820 - 106776
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||| |||||| |||||||||||||  |||||||||||||    
T  106820 ctttagatgattttgaatgcctgaatatgtacaataatgattagg 106776  T

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Target: scaffold0216 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16756 - 16804
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||||||||||| |||   ||||||||||||||||||||    
T  16756 ttctgtgtttttgacttttgagttgaagcttagatgcttttgagtgcct 16804  T

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Target: scaffold0737 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 1626 - 1729
Alignment:
Q  189 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 288  Q
    |||||||| ||| || ||||||||||| | ||||||  |||||||||||  ||| ||||||||||||   |||||| || || ||||| ||||||||||     
T  1626 ttaggttacatgtgacctttgtcgcacgagttgatgtgagttgatcttgagggtaagaaactaagttgcctatcttactattgttgttccagtaagcctg 1725  T
Q  289 aatt 292  Q
    ||||    
T  1726 aatt 1729  T

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Target: scaffold0737; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 1382 - 1452
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 98  Q
    ||||||||| || |||||||||||| |||| ||||||||| |||| ||| ||  |||| ||||||||||||    
T  1382 ctttagatgattctgagtgcctgaacatgtataataatgagtaggcaagtttttagatggagattgaacct 1452  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21441 - 21492
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaa 52  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||||||    
T  21441 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21492  T

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Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29333 - 29384
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaa 52  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||||||||    
T  29333 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 29384  T

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Target: scaffold0158 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 3321 - 3254
Alignment:
Q  3 ctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  3321 ctgtatttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 3254  T

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Target: scaffold0158; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 6982 - 6920
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  6982 tttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 6920  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 46369 - 46432
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  46369 tttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattag 46432  T

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Target: scaffold1895 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 890 - 952
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  890 tttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 952  T

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Target: scaffold0393 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 1966 - 1904
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  1966 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 1904  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 13235 - 13173
Alignment:
Q  8 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  13235 tttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 13173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2360 - 2291
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| |||||||| |||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  2360 ttctgtatttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10456 - 10525
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||| ||||||||||||||| ||| | ||||||| |||||||||| |||| ||| ||| ||| |||||    
T  10456 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcttgaagatgcctattaaagatta 10525  T

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Target: scaffold0280 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 18940 - 18985
Alignment:
Q  4 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||    
T  18940 tgtgattttgacttttgagttgaaccttagatgcttttgagtgcct 18985  T

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Target: scaffold0268 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 606 - 667
Alignment:
Q  38 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 99  Q
    |||||||||| ||||||||| |||||||||||||| ||| ||  |||| ||||||| |||||    
T  606 ttttgagtgcatgaatatgtataataatgattaggcaagtttttagatggagattggacctg 667  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 190916 - 190985
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||||||||||| | | | ||||||| |||||||||||| || |||| ||  ||||||||    
T  190916 ttctgtgtttttgacttttgagttcaaccttagatgtttttgagtgcctaaagatgtttagaaatgatta 190985  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 192619 - 192688
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 70  Q
    |||||||||||||||||||||| | | | ||||||| |||||||||||| || |||| ||  ||||||||    
T  192619 ttctgtgtttttgacttttgagttcaaccttagatgtttttgagtgcctaaagatgtttagaaatgatta 192688  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 86078 - 86013
Alignment:
Q  31 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    |||||| ||||||||||||| |||||| || ||||||||||| ||  ||  |||||||||||||||    
T  86078 tagatgattttgagtgcctggatatgtatattaatgattaggcaaatttttagattgagattgaac 86013  T

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Target: scaffold1552 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 813 - 769
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 45  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  813 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 769  T

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Target: scaffold1326 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 1143 - 1183
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    ||||||||| |||| ||| ||||||||||||||||||||||    
T  1143 ttttgacttgtgagttgaactttagatgcttttgagtgcct 1183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 2241 - 2173
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 96  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||  ||| ||  ||||||| |||||||    
T  2241 ctttagatgtttttgagtgctggaatatgtataataatgattagacaagtttttagattgaaattgaac 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 6059 - 6099
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  6059 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15885 - 15837
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  15885 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 15837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6713 - 6761
Alignment:
Q  1 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  6713 ttctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 2300 - 2240
Alignment:
Q  11 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||| ||| | |||||||||||| ||||||| || |||| |||||| ||||||    
T  2300 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagattag 2240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 9982 - 9922
Alignment:
Q  11 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 71  Q
    |||||||||||| ||| | |||||||||||| ||||||| || |||| |||||| ||||||    
T  9982 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagattag 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 44526 - 44486
Alignment:
Q  9 ttttgacttttgagatgacctttagatgcttttgagtgcct 49  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  44526 ttttgacttttgagttgaaccttagatgcttttgagtgcct 44486  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 55269 - 55313
Alignment:
Q  28 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 72  Q
    ||||||||| ||||||||||||||| |||| ||| ||||||||||    
T  55269 ctttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

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