View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19628_high_52 (Length: 239)
Name: NF19628_high_52
Description: NF19628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19628_high_52 |
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Alignment Details
Target: chr7 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 44 - 224
Target Start/End: Complemental strand, 4835197 - 4835017
Alignment:
| Q |
44 |
ggttgcaactacgaaaccaaaactggaagttgcnnnnnnntggaacccaactagagaagccatggacatatnnnnnnncgcaaggatgcttggcatctat |
143 |
Q |
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| T |
4835197 |
ggttgcaactacgaaaccaaaactggaagttgcaaaaaaatggaacccaactagagaagccatggacatataaaaaaacgcaaggatgcttggcatctat |
4835098 |
T |
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| Q |
144 |
atcatcaatagctggtatgcctacaacttcctcgcagagcgagcgccacttttcagcaactgcaggaaaggttgcaattta |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4835097 |
atcatcaatagctggtatgcctacaacttcctcgcagagcgagcgccacttttcagcaactgcaggaaaggttgcaattta |
4835017 |
T |
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