View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19628_high_58 (Length: 206)

Name: NF19628_high_58
Description: NF19628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19628_high_58
NF19628_high_58
[»] chr4 (42 HSPs)
chr4 (92-187)||(22201226-22201321)
chr4 (92-178)||(20872437-20872524)
chr4 (16-79)||(8592144-8592207)
chr4 (16-79)||(19088553-19088616)
chr4 (16-70)||(53995146-53995200)
chr4 (16-79)||(623891-623954)
chr4 (16-79)||(6505748-6505811)
chr4 (16-79)||(16038006-16038069)
chr4 (16-70)||(25182024-25182078)
chr4 (92-171)||(13267830-13267909)
chr4 (16-79)||(14985506-14985569)
chr4 (92-171)||(15871160-15871239)
chr4 (16-79)||(33091665-33091728)
chr4 (16-79)||(38339667-38339730)
chr4 (16-79)||(39448700-39448763)
chr4 (16-79)||(42855551-42855614)
chr4 (16-79)||(44991490-44991553)
chr4 (16-79)||(46849881-46849944)
chr4 (16-79)||(50768996-50769059)
chr4 (16-70)||(12817990-12818044)
chr4 (92-170)||(15888736-15888814)
chr4 (16-70)||(41752028-41752082)
chr4 (23-79)||(15477864-15477920)
chr4 (23-79)||(30683747-30683803)
chr4 (16-79)||(1433483-1433546)
chr4 (16-79)||(21763393-21763456)
chr4 (16-79)||(37206639-37206702)
chr4 (24-79)||(43566598-43566653)
chr4 (23-67)||(50508676-50508720)
chr4 (23-67)||(53751121-53751165)
chr4 (16-79)||(6712138-6712201)
chr4 (16-67)||(19508625-19508676)
chr4 (16-79)||(23755630-23755693)
chr4 (16-51)||(23756012-23756047)
chr4 (24-79)||(36122653-36122708)
chr4 (16-79)||(41878071-41878134)
chr4 (16-79)||(43734498-43734561)
chr4 (16-79)||(44957564-44957627)
chr4 (16-79)||(52557299-52557362)
chr4 (92-178)||(9886731-9886817)
chr4 (142-179)||(10057435-10057472)
chr4 (30-79)||(53259364-53259413)
[»] chr8 (17 HSPs)
chr8 (16-79)||(34470719-34470782)
chr8 (16-79)||(33295896-33295959)
chr8 (16-79)||(27473283-27473346)
chr8 (16-79)||(38588762-38588825)
chr8 (16-79)||(7949587-7949650)
chr8 (16-79)||(15871833-15871896)
chr8 (16-79)||(40048230-40048293)
chr8 (16-79)||(45077415-45077478)
chr8 (16-79)||(45276808-45276871)
chr8 (16-70)||(1432315-1432369)
chr8 (16-70)||(5152746-5152800)
chr8 (16-52)||(44594813-44594849)
chr8 (16-79)||(7535045-7535108)
chr8 (16-79)||(11707962-11708025)
chr8 (16-79)||(24659408-24659471)
chr8 (142-179)||(19807649-19807686)
chr8 (23-79)||(27669591-27669647)
[»] chr1 (27 HSPs)
chr1 (92-178)||(15544099-15544185)
chr1 (16-79)||(12481271-12481334)
chr1 (16-79)||(4697094-4697157)
chr1 (16-79)||(31703789-31703852)
chr1 (16-79)||(45052901-45052964)
chr1 (24-79)||(49643891-49643946)
chr1 (16-70)||(37576365-37576419)
chr1 (16-79)||(9006403-9006466)
chr1 (24-79)||(12127273-12127328)
chr1 (16-79)||(20306177-20306240)
chr1 (16-79)||(26707408-26707471)
chr1 (16-79)||(37284940-37285003)
chr1 (16-79)||(44322835-44322898)
chr1 (16-79)||(49140355-49140418)
chr1 (23-79)||(6798026-6798082)
chr1 (23-79)||(37304203-37304259)
chr1 (24-79)||(23476561-23476616)
chr1 (16-79)||(25995959-25996022)
chr1 (16-79)||(35612294-35612357)
chr1 (25-79)||(4330058-4330112)
chr1 (23-79)||(2064430-2064486)
chr1 (23-79)||(16024072-16024128)
chr1 (16-79)||(3089517-3089580)
chr1 (16-79)||(27400636-27400699)
chr1 (24-79)||(38127884-38127939)
chr1 (18-79)||(27547883-27547944)
chr1 (16-52)||(37585905-37585941)
[»] chr7 (24 HSPs)
chr7 (16-79)||(41453217-41453280)
chr7 (16-79)||(17359356-17359419)
chr7 (16-79)||(21391402-21391465)
chr7 (16-79)||(44332731-44332794)
chr7 (16-79)||(48626275-48626338)
chr7 (16-70)||(35146910-35146964)
chr7 (24-79)||(7579092-7579147)
chr7 (16-79)||(8542674-8542737)
chr7 (16-79)||(31638155-31638218)
chr7 (24-79)||(6356940-6356995)
chr7 (16-79)||(28286329-28286392)
chr7 (16-79)||(33716763-33716826)
chr7 (16-79)||(41191897-41191960)
chr7 (16-79)||(43247590-43247653)
chr7 (16-70)||(34037123-34037177)
chr7 (18-79)||(36423544-36423605)
chr7 (16-79)||(6356460-6356523)
chr7 (92-171)||(11800186-11800265)
chr7 (16-51)||(17363437-17363472)
chr7 (16-79)||(28297994-28298057)
chr7 (16-67)||(41751837-41751888)
chr7 (24-70)||(8937069-8937115)
chr7 (93-179)||(46579927-46580013)
chr7 (16-53)||(17750147-17750184)
[»] chr6 (25 HSPs)
chr6 (16-79)||(31247291-31247354)
chr6 (16-79)||(5639385-5639448)
chr6 (16-79)||(24744503-24744566)
chr6 (16-79)||(25176869-25176932)
chr6 (16-72)||(2517184-2517240)
chr6 (16-79)||(5311001-5311064)
chr6 (16-79)||(5938025-5938088)
chr6 (16-79)||(7270804-7270867)
chr6 (24-79)||(21540197-21540252)
chr6 (16-79)||(21856767-21856830)
chr6 (16-79)||(26600532-26600595)
chr6 (16-79)||(26957137-26957200)
chr6 (16-67)||(31237933-31237984)
chr6 (16-79)||(34994592-34994655)
chr6 (16-60)||(32753367-32753411)
chr6 (16-79)||(3423382-3423445)
chr6 (16-79)||(6236133-6236196)
chr6 (16-79)||(7270128-7270191)
chr6 (16-79)||(9046261-9046324)
chr6 (16-79)||(18053131-18053194)
chr6 (93-179)||(20733450-20733536)
chr6 (16-79)||(32993227-32993290)
chr6 (16-79)||(34890819-34890882)
chr6 (16-79)||(35167702-35167767)
chr6 (142-179)||(27851966-27852003)
[»] chr3 (37 HSPs)
chr3 (16-79)||(5900635-5900698)
chr3 (16-79)||(11256278-11256341)
chr3 (16-79)||(22152020-22152083)
chr3 (16-79)||(42591959-42592022)
chr3 (16-79)||(46152788-46152851)
chr3 (16-79)||(51509331-51509394)
chr3 (16-79)||(8474058-8474121)
chr3 (16-79)||(10506160-10506223)
chr3 (92-171)||(22161555-22161634)
chr3 (16-79)||(24428742-24428805)
chr3 (16-79)||(47669434-47669497)
chr3 (16-79)||(53716468-53716531)
chr3 (16-79)||(54752338-54752401)
chr3 (16-70)||(47303231-47303285)
chr3 (23-79)||(22201791-22201847)
chr3 (23-79)||(26318401-26318457)
chr3 (16-79)||(15986410-15986472)
chr3 (16-79)||(21969804-21969867)
chr3 (92-171)||(21976929-21977008)
chr3 (16-79)||(21992240-21992303)
chr3 (92-171)||(21999360-21999439)
chr3 (16-79)||(32633277-32633340)
chr3 (16-79)||(39241533-39241596)
chr3 (16-79)||(39664396-39664459)
chr3 (16-79)||(39951532-39951595)
chr3 (16-79)||(41835138-41835201)
chr3 (16-79)||(54108114-54108177)
chr3 (92-170)||(16358033-16358111)
chr3 (16-70)||(27801673-27801727)
chr3 (92-165)||(19186613-19186686)
chr3 (16-52)||(19883441-19883477)
chr3 (23-79)||(21568920-21568976)
chr3 (24-79)||(1994389-1994443)
chr3 (16-79)||(4773417-4773480)
chr3 (16-79)||(18464631-18464694)
chr3 (142-179)||(14966940-14966977)
chr3 (16-48)||(29818383-29818415)
[»] scaffold0364 (1 HSPs)
scaffold0364 (92-178)||(14374-14460)
[»] chr2 (21 HSPs)
chr2 (23-79)||(12860586-12860642)
chr2 (16-79)||(15744632-15744695)
chr2 (16-79)||(19815916-19815979)
chr2 (17-79)||(34735556-34735618)
chr2 (18-79)||(41474257-41474318)
chr2 (26-70)||(7469350-7469394)
chr2 (16-79)||(8174097-8174160)
chr2 (16-79)||(24138718-24138781)
chr2 (16-79)||(26181912-26181975)
chr2 (16-79)||(29472417-29472480)
chr2 (16-79)||(38332879-38332942)
chr2 (92-178)||(22497416-22497502)
chr2 (16-79)||(2148098-2148161)
chr2 (16-79)||(24372179-24372242)
chr2 (23-79)||(13193163-13193219)
chr2 (16-79)||(7496192-7496254)
chr2 (16-79)||(10992026-10992089)
chr2 (16-79)||(19847531-19847593)
chr2 (93-179)||(27473216-27473302)
chr2 (16-69)||(36713771-36713823)
chr2 (16-52)||(15405968-15406004)
[»] scaffold0221 (1 HSPs)
scaffold0221 (16-79)||(8603-8666)
[»] scaffold0118 (1 HSPs)
scaffold0118 (92-171)||(11779-11858)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-79)||(50688-50751)
[»] chr5 (14 HSPs)
chr5 (99-178)||(24564710-24564789)
chr5 (99-178)||(24605745-24605824)
chr5 (92-178)||(25581555-25581641)
chr5 (92-166)||(32948617-32948691)
chr5 (16-79)||(36440412-36440475)
chr5 (16-67)||(24040297-24040348)
chr5 (16-79)||(35569992-35570055)
chr5 (24-70)||(27186057-27186103)
chr5 (16-70)||(34264560-34264614)
chr5 (16-70)||(37424474-37424528)
chr5 (23-79)||(29199171-29199227)
chr5 (23-79)||(2183118-2183174)
chr5 (23-79)||(9989498-9989554)
chr5 (16-52)||(16860515-16860551)
[»] scaffold0037 (1 HSPs)
scaffold0037 (16-69)||(45941-45994)
[»] scaffold0182 (1 HSPs)
scaffold0182 (16-79)||(19883-19946)
[»] scaffold0134 (1 HSPs)
scaffold0134 (16-79)||(14347-14410)
[»] scaffold0003 (2 HSPs)
scaffold0003 (16-79)||(113541-113604)
scaffold0003 (16-79)||(349248-349311)
[»] scaffold0246 (1 HSPs)
scaffold0246 (16-70)||(6179-6233)
[»] scaffold0186 (1 HSPs)
scaffold0186 (16-70)||(24346-24400)
[»] scaffold0032 (2 HSPs)
scaffold0032 (16-70)||(82070-82124)
scaffold0032 (142-179)||(68057-68094)
[»] scaffold0340 (1 HSPs)
scaffold0340 (16-79)||(18448-18511)
[»] scaffold0220 (1 HSPs)
scaffold0220 (16-79)||(20926-20988)
[»] scaffold0072 (1 HSPs)
scaffold0072 (16-79)||(15623-15686)
[»] scaffold0385 (1 HSPs)
scaffold0385 (92-147)||(15980-16035)
[»] scaffold0381 (1 HSPs)
scaffold0381 (92-178)||(11727-11813)
[»] scaffold0153 (1 HSPs)
scaffold0153 (142-179)||(12080-12117)
[»] scaffold0029 (1 HSPs)
scaffold0029 (23-79)||(72937-72992)


Alignment Details
Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 22201321 - 22201226
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaagagtccccta 187  Q
    |||||||||||| ||||||| |||||||||| ||||||| ||||| || |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  22201321 gaattagtgtttaaatgatagggtagtcatgagatgaattttagggtcaagtttggagagtatataatcgaaaacggagtcgaaaagggtccccta 22201226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 20872437 - 20872524
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatggga-tgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    |||||||||||||||||||| |||| |||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20872437 gaattagtgtttgaatgatagggtaatcatggaagtgaatattagggtcgagtttggagagtacatgatcgaaaacggagtcgaaaag 20872524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 8592207 - 8592144
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  8592207 aatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaa 8592144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 19088553 - 19088616
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  19088553 aatatcagtcactatttaatcataataccttaacaaggaataagatcaaaatgatactaataaa 19088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 53995146 - 53995200
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  53995146 aatatcagtcactatttaatcataataccttaacaaggaataggaccaaaatgat 53995200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 623891 - 623954
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||| |||||||||||||| || ||||||||| | ||||||    
T  623891 aatatctgtcactatttaatcataatatcttaacaaggaataagaccaaaatgatgctaataaa 623954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 6505748 - 6505811
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  6505748 aatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 6505811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 16038006 - 16038069
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  16038006 aatatccgtcactacttaatcataataccttaacaaggaataggaccaaaatgatgctaataaa 16038069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 25182024 - 25182078
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  25182024 aatatccgtcactatttaatcataatatcttaacaaggaataggaccaaaatgat 25182078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 13267909 - 13267830
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagt 171  Q
    |||||||| ||||||||||| |||||||||||  |||| |||||| |||||||||| |||| || | |||||||||||||    
T  13267909 gaattagtttttgaatgatagggtagtcatggagtgaagattagggtcgagtttggtgagtttagggtcgaaaacggagt 13267830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 14985569 - 14985506
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||| | ||||||    
T  14985569 aatatcagtcactatttaatcataatactttaacaaggcataggaccaaaatgatactaataaa 14985506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 15871160 - 15871239
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagt 171  Q
    |||||||||||| ||||||| |||||||||||  |||| |||||| |||||||||| |||| || | |||||||||||||    
T  15871160 gaattagtgtttcaatgatagggtagtcatggagtgaagattagggtcgagtttggcgagtttagggtcgaaaacggagt 15871239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 33091665 - 33091728
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| | |||||| ||||||||| | ||||||    
T  33091665 aatatcagtcactatttaatcataataccttaacaaagcataggaccaaaatgatactaataaa 33091728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 38339730 - 38339667
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||| |||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  38339730 aatatgtgtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 38339667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 39448700 - 39448763
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||| |||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  39448700 aatatttgtcactatttaatcataataccttaacaaggcataagaccaaaatgatgctaataaa 39448763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 42855551 - 42855614
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| |||||||||||||||||||||| |||||||||| ||||||||| | ||||||    
T  42855551 aatatcagtcattatttaatcataataccttaacgaggaataggaccaaaatgatactaataaa 42855614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 44991490 - 44991553
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  44991490 aatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaa 44991553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 46849881 - 46849944
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||||||| || ||||||||| | ||||||    
T  46849881 aatatcggtcactatttaatcataatatcttaacaaggaataagaccaaaatgatactaataaa 46849944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 50769059 - 50768996
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  50769059 aatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaa 50768996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 12818044 - 12817990
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || |||||||||    
T  12818044 aatatccgtcactatttaatcataataccttaacaaggcatatgaccaaaatgat 12817990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 15888736 - 15888814
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggag 170  Q
    |||||||||||| ||||||| |||||||||||  |||| |||||| |||||||||| |||| || | ||||||||||||    
T  15888736 gaattagtgtttcaatgatagggtagtcatggagtgaagattagggtcgagtttggcgagtttagggtcgaaaacggag 15888814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 41752028 - 41752082
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  41752028 aatatcagtcactatttaatcataataccttagcaaggcatatgatcaaaatgat 41752082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 15477864 - 15477920
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  15477864 gtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 15477920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 30683747 - 30683803
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  30683747 gtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 30683803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 1433483 - 1433546
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||| |||||||| ||| || ||||||||| | ||||||    
T  1433483 aatatcagtcactatttaatcataataccataacaaggcataagaccaaaatgatactaataaa 1433546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21763393 - 21763456
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||| ||||  | ||||||||| | ||||||    
T  21763393 aatatcagtcactatttaatcataataccttaacaagaaataaaaacaaaatgatactaataaa 21763456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 37206639 - 37206702
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| | ||||||||||||||||||||||||||| ||||| || ||||||||| | ||||||    
T  37206639 aatatcagccactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaa 37206702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 43566598 - 43566653
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||| | ||||||    
T  43566598 tcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaa 43566653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 50508676 - 50508720
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaat 67  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||    
T  50508676 gtcactatttaatcataataccttaacaaggcatatgaccaaaat 50508720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 53751121 - 53751165
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaat 67  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||    
T  53751121 gtcactatttaatcataataccttaacaaggcataagaccaaaat 53751165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 6712201 - 6712138
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| ||||| |||| | |||| ||||||||| | ||||||    
T  6712201 aatatcagtcactatttaatcataatatcttaataaggcacaggaccaaaatgatactaataaa 6712138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 19508625 - 19508676
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaat 67  Q
    |||||| |||||| |||||||||||||||||||||||| ||| || ||||||    
T  19508625 aatatcagtcactgtttaatcataataccttaacaaggcatatgaccaaaat 19508676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 23755630 - 23755693
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||||||| | ||| || ||||||||| | ||||||    
T  23755630 aatatcagtcactatttaatcataatacattaacaaagcatatgaccaaaatgatactaataaa 23755693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 23756012 - 23756047
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaa 51  Q
    |||||| |||||||||||||||||||||||||||||    
T  23756012 aatatcagtcactatttaatcataataccttaacaa 23756047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 36122653 - 36122708
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||| ||||||||||||||||||| ||| || ||||||||| | ||||||    
T  36122653 tcactatttagtcataataccttaacaaggcatatgaccaaaatgatactaataaa 36122708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 41878071 - 41878134
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| ||||||||||||||||||||||||  |||| || ||||||||| | ||||||    
T  41878071 aatatcagtcaatatttaatcataataccttaacaaataatatgaccaaaatgatactaataaa 41878134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 43734498 - 43734561
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||  ||||||||| ||| || ||||||||| | ||||||    
T  43734498 aatatcagtcactatttaatcataatattttaacaaggcataagaccaaaatgatactaataaa 43734561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 44957627 - 44957564
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||| ||||| ||| || ||||||||| | ||||||    
T  44957627 aatatcagtcactatttaatcataatacattatcaaggcatatgaccaaaatgatactaataaa 44957564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 52557299 - 52557362
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| || |||||||||||||||||||||||||||  ||| || ||||||||| | ||||||    
T  52557299 aatatcagttactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaa 52557362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 9886817 - 9886731
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    |||||||||||| || |||||| || ||||| | |||| |||| |  |||||||||||| |||| |||||||||||| ||| |||||    
T  9886817 gaattagtgtttcaacgataagataatcatgaggtgaagattacggccgagtttggagaatataggatcgaaaacggtgtcaaaaag 9886731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 10057472 - 10057435
Alignment:
Q  142 gtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    |||||||||||||  |||||||||||||||||||||||    
T  10057472 gtttggagagtatcggatcgaaaacggagtcgaaaaga 10057435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 53259364 - 53259413
Alignment:
Q  30 tttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  53259364 tttaatcataataccttaacaaggcataagaccaaaatgatactaataaa 53259413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 34470782 - 34470719
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  34470782 aatatctgtcactatttaatcataataccttaacaaggaatatgatcaaaatgatactaataaa 34470719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 33295896 - 33295959
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  33295896 aatatcagtcactatttaatcataataccttaacaaggaatatgatcaaaatgatactaataaa 33295959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 27473283 - 27473346
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  27473283 aatatcagtcactatttaatcataataccttaacaaggaataagaccaaaatgatactaataaa 27473346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 38588825 - 38588762
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  38588825 aatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 38588762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 7949650 - 7949587
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  7949650 aatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaa 7949587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 15871833 - 15871896
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| | ||||||    
T  15871833 aatatcagtcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaa 15871896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 40048293 - 40048230
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||| | ||||||    
T  40048293 aatatcagtcactatttaatcataataccttaacaatgaatatgaccaaaatgatactaataaa 40048230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 45077415 - 45077478
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  45077415 aatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaa 45077478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 45276808 - 45276871
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||||||||||||| || ||||||||| | ||||||    
T  45276808 aatatcagtcactatttaatcataatactttaacaaggaatatgaccaaaatgatactaataaa 45276871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 1432369 - 1432315
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||| |||||||| ||||||||| ||| ||||||||||||    
T  1432369 aatatcagtcactatttaaacataatacattaacaaggcatatgatcaaaatgat 1432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 5152746 - 5152800
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    ||||| ||||||||||||||||||||||||||| |||| ||| || |||||||||    
T  5152746 aatatttgtcactatttaatcataataccttaagaaggcatatgaccaaaatgat 5152800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 44594813 - 44594849
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaag 52  Q
    |||||| ||||||||||||||||||||||||||||||    
T  44594813 aatatcagtcactatttaatcataataccttaacaag 44594849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 7535045 - 7535108
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| |||||||||||||||| ||||| ||||||| || ||||||||| | ||||||    
T  7535045 aatatcagtcattatttaatcataatacgttaacgaggaataagaccaaaatgatactaataaa 7535108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 11707962 - 11708025
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| ||||||||||||||||||||||||   ||| |||||||||||| | ||||||    
T  11707962 aatatcagtcattatttaatcataataccttaacaaaacataagatcaaaatgatactaataaa 11708025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 24659408 - 24659471
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||| |||||||||| |||| | |||| ||||||||| | ||||||    
T  24659408 aatatcagtcactatttaatcagaataccttaataaggcagaggaccaaaatgatactaataaa 24659471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 19807649 - 19807686
Alignment:
Q  142 gtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    |||||||||||||  |||||||||||||||||||||||    
T  19807649 gtttggagagtattggatcgaaaacggagtcgaaaaga 19807686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 27669647 - 27669591
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||  ||||||||| ||| || ||||||||| | ||||||    
T  27669647 gtcactatttaatcataataatttaacaaggtatatgaccaaaatgatactaataaa 27669591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 15544185 - 15544099
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    |||||||||||||| ||||| |||| ||||||| |||| |||| |  |||||||||||||||||||||| |||||||||||||||||    
T  15544185 gaattagtgtttgattgatagggtaatcatggggtgaagattatggccgagtttggagagtatatgatctaaaacggagtcgaaaag 15544099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 12481271 - 12481334
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  12481271 aatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaa 12481334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 4697094 - 4697157
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||    
T  4697094 aatatcagtcactatttaatcataataccttaacaagacataggatcaaaatgatactaataaa 4697157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 31703852 - 31703789
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||||||||| | ||||||||| | ||||||    
T  31703852 aatatccgtcactatttaatcataataccttaacaaggaatagaaccaaaatgatgctaataaa 31703789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 45052901 - 45052964
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  45052901 aatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 45052964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 49643891 - 49643946
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  49643891 tcactatttaatcataataccttaacaaggcataggatcaaaatgatactaataaa 49643946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 37576419 - 37576365
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  37576419 aatatcggtcactatttaatcctaataccttaacaaggaataggaccaaaatgat 37576365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 9006403 - 9006466
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||| | ||||||    
T  9006403 aatatcagtcactatttaatcataatacattaacaaggcataggaccaaaatgatactaataaa 9006466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 12127273 - 12127328
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  12127273 tcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaa 12127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 20306240 - 20306177
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  20306240 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 20306177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 26707408 - 26707471
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  26707408 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 26707471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 37284940 - 37285003
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  37284940 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 37285003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 44322898 - 44322835
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  44322898 aatatcagtcacaatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 44322835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 49140355 - 49140418
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||||||||  | ||||||||| | ||||||    
T  49140355 aatatcagtcactatttaatcataataccttaacaaggaatataaccaaaatgatactaataaa 49140418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 6798026 - 6798082
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  6798026 gtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 6798082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 37304259 - 37304203
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  37304259 gtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 37304203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 23476561 - 23476616
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||| | ||||||    
T  23476561 tcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaa 23476616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 25996022 - 25995959
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| | ||||||||||||||| ||||||||||||| |||||| ||||||||| | ||||||    
T  25996022 aatatcagccactatttaatcatattaccttaacaaggcataggaccaaaatgatactaataaa 25995959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 35612294 - 35612357
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  ||| || ||||||||| | ||||||    
T  35612294 aatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaa 35612357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 4330058 - 4330112
Alignment:
Q  25 cactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| | ||||||    
T  4330058 cactatttaaccataataccttaacaaggaatatgattaaaatgatactaataaa 4330112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 2064430 - 2064486
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||||  ||| || ||||||||| | ||||||    
T  2064430 gtcactatttaatcataataccttaacaagacataagaccaaaatgatactaataaa 2064486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 16024128 - 16024072
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||| ||||||| ||| || ||||||||| | ||||||    
T  16024128 gtcactatttaatcataatacctcaacaaggcatatgaccaaaatgatactaataaa 16024072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 3089580 - 3089517
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||||||||  ||| || ||||||||| | ||||||    
T  3089580 aatatcagtcactatttaatcataatactttaacaagacatatgaccaaaatgatactaataaa 3089517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 27400636 - 27400699
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||||||||| ||| ||  |||||||| | ||||||    
T  27400636 aatatcagtcactatttaatcataatacattaacaaggcataagactaaaatgatactaataaa 27400699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 38127939 - 38127884
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||| |||| ||| || ||||||||| | ||||||    
T  38127939 tcactatttaatcataataccttaataaggcataagaccaaaatgatactaataaa 38127884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 27547883 - 27547944
Alignment:
Q  18 tatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||| ||||||||||||||||||||| ||||||| | |||| | ||||||||| | ||||||    
T  27547883 tatcagtcactatttaatcataatactttaacaaagcatagtaccaaaatgatactaataaa 27547944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 37585905 - 37585941
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaag 52  Q
    |||||| |||||||||||||||||||| |||||||||    
T  37585905 aatatcagtcactatttaatcataatatcttaacaag 37585941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 41453217 - 41453280
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  41453217 aatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaa 41453280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 17359419 - 17359356
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| | ||||||    
T  17359419 aatatcagtcactatttaatcataataccttaacaagaaataggaccaaaatgatactaataaa 17359356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21391402 - 21391465
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||    
T  21391402 aatatcagtcactatttaatcataataccttaacaaggcataagatcaaaatgatactaataaa 21391465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 44332731 - 44332794
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  44332731 aatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 44332794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 48626275 - 48626338
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  48626275 aatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaa 48626338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 35146910 - 35146964
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| ||||||||||||||||||||||||||||||||||| || |||||||||    
T  35146910 aatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgat 35146964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 7579092 - 7579147
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  7579092 tcactatttaatcataataccttaacaaggaataagaccaaaatgatactaataaa 7579147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 8542737 - 8542674
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| |||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  8542737 aatatccgtcaatatttaatcataataccttaacaaggaatatgaccaaaatgatgctaataaa 8542674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 31638155 - 31638218
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  31638155 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 31638218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 6356995 - 6356940
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||| | ||||||    
T  6356995 tcactgtttaatcataataccttaacaaggaatagaaccaaaatgatactaataaa 6356940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 28286329 - 28286392
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||| |||||||||   ||||||||| | ||||||    
T  28286329 aatatcggtcactatttaatcataataccttaagaaggaatagttccaaaatgatactaataaa 28286392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 33716826 - 33716763
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| |||||||||||||||||||||||||  |||||| ||||||||| | ||||||    
T  33716826 aatatcagtcattatttaatcataataccttaacaagacataggaccaaaatgatactaataaa 33716763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 41191897 - 41191960
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||| ||| |||| || ||||||||| | ||||||    
T  41191897 aatatcagtcactatttaatcataataccttaataagaaatatgaccaaaatgatactaataaa 41191960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 43247653 - 43247590
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| | ||| || ||||||||| | ||||||    
T  43247653 aatatcagtcactatttaatcataataccttaacaatgcataagaccaaaatgatactaataaa 43247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 34037123 - 34037177
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||||||||||||  |||| || |||||||||    
T  34037123 aatatcagtcactatttaatcataataccttaacaaaaaatatgaccaaaatgat 34037177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 36423605 - 36423544
Alignment:
Q  18 tatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||| |||||||||| |||||||||||||||| ||| |||||| ||||||||| | ||||||    
T  36423605 tatcagtcactatttgatcataataccttaaccaggtataggaccaaaatgatactaataaa 36423544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 6356523 - 6356460
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||| ||  |||||| ||||||||| | ||||||    
T  6356523 aatatcagtcactatttaatcataatatcttaacgagatataggaccaaaatgatactaataaa 6356460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 11800186 - 11800265
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagt 171  Q
    |||||||||||| ||||||| |||| ||||||  |||| |||||| | |||||||| |||| || | |||||||||||||    
T  11800186 gaattagtgtttcaatgatagggtaatcatggagtgaagattagggttgagtttggcgagtttagggtcgaaaacggagt 11800265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 17363472 - 17363437
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaa 51  Q
    |||||| |||||||||||||||||||||||||||||    
T  17363472 aatatcagtcactatttaatcataataccttaacaa 17363437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 28298057 - 28297994
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||| ||  ||| || ||||||||| | ||||||    
T  28298057 aatatcagtcactatttaatcataataccttaactagtcatatgaccaaaatgatactaataaa 28297994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 41751888 - 41751837
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaat 67  Q
    |||||| |||||||||||||||||||| |||||||||  |||||| ||||||    
T  41751888 aatatcagtcactatttaatcataataacttaacaagacataggaccaaaat 41751837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 8937069 - 8937115
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||||||||||| ||||||||||||||||||| || ||| |||||    
T  8937069 tcactatttaatcacaataccttaacaaggaatatgaccaacatgat 8937115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 46579927 - 46580013
Alignment:
Q  93 aattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    ||||||||||  ||||||| |||  |||| || | | ||||||| ||  |||||||||||||  |||||||||||||||||||||||    
T  46579927 aattagtgttataatgatagggtgatcatagggtaattattagggtcatgtttggagagtattggatcgaaaacggagtcgaaaaga 46580013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 17750147 - 17750184
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaagg 53  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  17750147 aatatcagtcattatttaatcataataccttaacaagg 17750184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 31247354 - 31247291
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  31247354 aatatctgtcattatttaatcataataccttaacaaggaatatgatcaaaatgatactaataaa 31247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 5639385 - 5639448
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  5639385 aatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaa 5639448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 24744566 - 24744503
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| | ||||||    
T  24744566 aatatcagtcactatttaatcataataccttaacaagaaataggaccaaaatgatactaataaa 24744503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 25176869 - 25176932
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||    
T  25176869 aatatttgtcactatttaatcataatatcttaacaaggaataggaccaaaatgatgctaataaa 25176932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 2517240 - 2517184
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattc 72  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  2517240 aatatcagtcactatttaatcataataccttaacaaagaatatgaccaaaatgattc 2517184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 5311064 - 5311001
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||| | ||||||    
T  5311064 aatatcagtcactatttaatcataataccttaacaatgaatatgaccaaaatgatactaataaa 5311001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 5938025 - 5938088
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||| | ||||||||| | ||||||    
T  5938025 aatatcagtcactatttaatcataataccttaacaaggcatagaaccaaaatgatactaataaa 5938088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 7270867 - 7270804
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  7270867 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 7270804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 21540197 - 21540252
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||    
T  21540197 tcactatttaatcataatatcttaacaaggcataggatcaaaatgatactaataaa 21540252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21856767 - 21856830
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||| |||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  21856767 aatatccgtcactgtttaatcataataccttaacaaggaataagaccaaaatgatgctaataaa 21856830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 26600595 - 26600532
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||| |||||||| || ||||||||| | ||||||    
T  26600595 aatatcggtcactatttaatcataataccttaataaggaatatgaccaaaatgatactaataaa 26600532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 26957200 - 26957137
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| | ||||||    
T  26957200 aatatcagtcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaa 26957137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 31237984 - 31237933
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaat 67  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  31237984 aatatctgtcattatttaatcataataccttaacaaggaacatgatcaaaat 31237933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 34994592 - 34994655
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  34994592 aatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaa 34994655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 32753411 - 32753367
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaatagga 60  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||    
T  32753411 aatatcagtcactatttaatcataataccttaacaaggcatagga 32753367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 3423382 - 3423445
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||| |||||||||||||||| ||| || ||||||||| | ||||||    
T  3423382 aatatcggtcactatttaatcgtaataccttaacaaggcataagaccaaaatgatactaataaa 3423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 6236133 - 6236196
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||| |||||| ||| ||||| | ||||||    
T  6236133 aatatcggtcactatttaatcataatatcttaacaaggcataggaccaagatgatactaataaa 6236196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 7270191 - 7270128
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||| ||||||||| ||| || ||||||||| | ||||||    
T  7270191 aatatcagtcactatttaatcataatactttaacaaggcatatgaccaaaatgatactaataaa 7270128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 9046324 - 9046261
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||| ||| || ||||||||| | ||||||    
T  9046324 aatatcagtcactatttaatcataatagcttaacaaggcataagaccaaaatgatactaataaa 9046261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 18053194 - 18053131
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| | |||| | ||||||||| | ||||||    
T  18053194 aatatcagtcactatttaatcataataccttaacaaagcatagaaccaaaatgatactaataaa 18053131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 20733450 - 20733536
Alignment:
Q  93 aattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    ||||||||||  |||||||||||| |||| |||| |  |||||| ||  |||||||||||||  ||||||||||||||| |||||||    
T  20733450 aattagtgttataatgataaggtaatcataggataatgattagggtcatgtttggagagtattggatcgaaaacggagttgaaaaga 20733536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 32993227 - 32993290
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| ||||||||||||| |||||||||||| ||| || ||||||||| | ||||||    
T  32993227 aatatcagtcattatttaatcataacaccttaacaaggcataagaccaaaatgatactaataaa 32993290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 34890882 - 34890819
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| |||||||||||||||| ||||||||| ||| || ||||||||| | ||||||    
T  34890882 aatatcagtcattatttaatcataatactttaacaaggcatatgaccaaaatgatactaataaa 34890819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 35167702 - 35167767
Alignment:
Q  16 aatatctgtcactatttaatcata--ataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||  ||||||||||||||| |||||  |||||||| | ||||||    
T  35167702 aatatcagtcactatttaatcatataataccttaacaaggattaggactaaaatgatactaataaa 35167767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 27852003 - 27851966
Alignment:
Q  142 gtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    |||||||||||||  |||||||||||||||||||||||    
T  27852003 gtttggagagtattggatcgaaaacggagtcgaaaaga 27851966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 5900635 - 5900698
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  5900635 aatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaa 5900698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 11256341 - 11256278
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  11256341 aatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 11256278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 22152083 - 22152020
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||    
T  22152083 aatatcagtcactatttaatcataataccttaacaatgaataggaccaaaatgatactaataaa 22152020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 42592022 - 42591959
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  42592022 aatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaa 42591959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 46152851 - 46152788
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  46152851 aatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaa 46152788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 51509331 - 51509394
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  51509331 aatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaa 51509394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 8474058 - 8474121
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||| | ||||||    
T  8474058 aatatcagtcactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaa 8474121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 10506160 - 10506223
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  10506160 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 10506223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 22161634 - 22161555
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagt 171  Q
    |||||||||||||||||||| |||||||||||  | | ||||||| |||||||||| |||| || | |||||||||||||    
T  22161634 gaattagtgtttgaatgatagggtagtcatggagtaactattagggtcgagtttggcgagtttagggtcgaaaacggagt 22161555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 24428805 - 24428742
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||| |||| |||||| ||||||||| | ||||||    
T  24428805 aatatcagtcactatttaatcataataccttaagaaggcataggagcaaaatgatactaataaa 24428742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 47669497 - 47669434
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||| ||||||||||||||||||| |||||||||||||| || ||||||||| | ||||||    
T  47669497 aatatctatcactatttaatcataatatcttaacaaggaatatgaccaaaatgatactaataaa 47669434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 53716531 - 53716468
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| | ||||||    
T  53716531 aatatcagtcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaa 53716468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 54752401 - 54752338
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||| | ||||||    
T  54752401 aatatcagtcactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaa 54752338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 47303231 - 47303285
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  47303231 aatatcagtcactatttaatcataataccttaataaggcatatgatcaaaatgat 47303285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 22201847 - 22201791
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  22201847 gtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 22201791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 26318401 - 26318457
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||| | ||||||    
T  26318401 gtcactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaa 26318457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 15986472 - 15986410
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||| | |||||||| ||||||||| | ||||||    
T  15986472 aatatcagtcactatttaatcataataccttaac-acgaataggaccaaaatgatactaataaa 15986410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 21969867 - 21969804
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||| |||||||||||||||||||||| || ||||| ||| | ||||||    
T  21969867 aatatcagtcactatttaaacataataccttaacaaggaataagaccaaaacgatactaataaa 21969804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 21977008 - 21976929
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagt 171  Q
    |||||||||||||||||| | |||||||||||  | ||||||||| |||||||||| |||| || | | |||||||||||    
T  21977008 gaattagtgtttgaatgacagggtagtcatggagtaaatattagggtcgagtttggcgagtttagggttgaaaacggagt 21976929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 21992303 - 21992240
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||| |||||||||||||||||||||| || ||||| ||| | ||||||    
T  21992303 aatatcagtcactatttaaacataataccttaacaaggaataagaccaaaacgatactaataaa 21992240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 21999439 - 21999360
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagt 171  Q
    |||||||||||||||||| | |||||||||||  | ||||||||| |||||||||| |||| || | | |||||||||||    
T  21999439 gaattagtgtttgaatgacagggtagtcatggagtaaatattagggtcgagtttggcgagtttagggttgaaaacggagt 21999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 32633277 - 32633340
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| ||||||||| |||| || ||||||||| | ||||||    
T  32633277 aatatcagtcactatttaatcataatatcttaacaagaaatatgaccaaaatgatactaataaa 32633340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 39241596 - 39241533
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  ||| || ||||||||| | ||||||    
T  39241596 aatatcagtcactatttaatcataataccttaacaagacataagaccaaaatgatactaataaa 39241533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 39664396 - 39664459
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| |||||||||||||||||||||||||| |||| | ||||||||| | ||||||    
T  39664396 aatatcagtcattatttaatcataataccttaacaaggcatagaaccaaaatgatactaataaa 39664459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 39951595 - 39951532
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||| ||| || ||||||||| | ||||||    
T  39951595 aatatcagtcactatttaatcataatatcttaacaaggcatatgaccaaaatgatactaataaa 39951532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 41835138 - 41835201
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||| ||||| ||||||||||||| || ||||||||| | ||||||    
T  41835138 aatatcagtcactatttaatcaaaatacattaacaaggaatatgaccaaaatgatactaataaa 41835201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 54108114 - 54108177
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  ||| || ||||||||| | ||||||    
T  54108114 aatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaa 54108177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 16358033 - 16358111
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggag 170  Q
    |||||||||||| ||||||| |||||||||||  |||| |||||| |||| ||||| |||| || | ||||||||||||    
T  16358033 gaattagtgtttcaatgatagggtagtcatggagtgaagattagggtcgaatttggcgagtttagggtcgaaaacggag 16358111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 27801727 - 27801673
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| ||||||||||||||||||||| ||||||||| |||| | |||||||||    
T  27801727 aatatcagtcactatttaatcataatactttaacaaggcatagaaccaaaatgat 27801673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 19186686 - 19186613
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaa 165  Q
    |||||||||||||||||||| |||||||||||  |||| |||| | |||||||||| |||| || | |||||||    
T  19186686 gaattagtgtttgaatgatagggtagtcatggagtgaagattacggtcgagtttggcgagtttagggtcgaaaa 19186613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 19883477 - 19883441
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaag 52  Q
    |||||| ||||||||||||||||||||||||||||||    
T  19883477 aatatcagtcactatttaatcataataccttaacaag 19883441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 21568976 - 21568920
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||| |||||||||| ||| || ||||||||| | ||||||    
T  21568976 gtcactatttaatcataatatcttaacaaggcatatgaccaaaatgatactaataaa 21568920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 1994389 - 1994443
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||| | ||||||    
T  1994389 tcactatttaatcataattc-ttaacaaggaataggaccaaaatgatgctaataaa 1994443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 4773480 - 4773417
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||| ||  |||||| ||||||||| | ||||||    
T  4773480 aatatcagtcactatttaatcataatatcttaacgagatataggaccaaaatgatactaataaa 4773417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 18464694 - 18464631
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||| |||||||||||||||| | ||| || ||||||||| | ||||||    
T  18464694 aatatcagtcactatttaaccataataccttaacaatgcatatgaccaaaatgatactaataaa 18464631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 14966977 - 14966940
Alignment:
Q  142 gtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    |||||||||||||  |||||||||||||||||||||||    
T  14966977 gtttggagagtattggatcgaaaacggagtcgaaaaga 14966940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 29818415 - 29818383
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaa 48  Q
    |||||| ||||||||||||||||||||||||||    
T  29818415 aatatcagtcactatttaatcataataccttaa 29818383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 14460 - 14374
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    ||||||||||||||||||||  ||| ||||||| |||| || ||| | ||||||||||||||||||||| |||||| ||||||||||    
T  14460 gaattagtgtttgaatgatagtgtaatcatggggtgaagataagggttgagtttggagagtatatgatcaaaaacgaagtcgaaaag 14374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 12860586 - 12860642
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  12860586 gtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaa 12860642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 15744695 - 15744632
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  15744695 aatatccgtcactatttaatcataataccttaacaaggaatatgaccaaaatgatgctaataaa 15744632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 19815916 - 19815979
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  19815916 aatatcagtcactatttaatcataataccttaacaaggaatatgagcaaaatgatactaataaa 19815979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 34735556 - 34735618
Alignment:
Q  17 atatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  34735556 atatcagtcactatttaatcctaataccttaacaaggaataggaccaaaatgatactaataaa 34735618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 41474318 - 41474257
Alignment:
Q  18 tatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||    
T  41474318 tatcagtcactatttaattataataccttaacaaggcataggatcaaaatgatactaataaa 41474257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 7469394 - 7469350
Alignment:
Q  26 actatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  7469394 actatttaatcataataccttaacaaggaataggaccaaaatgat 7469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 8174097 - 8174160
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||||||||||||||||||  | ||||||||| | ||||||    
T  8174097 aatatcagtcactatttaatcataataccttaacaaggaataaaaacaaaatgatactaataaa 8174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 24138718 - 24138781
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||| |||||| ||||||||| | ||||||    
T  24138718 aatatcagtcactatttaatcataatatcttaacaaggcataggaccaaaatgatactaataaa 24138781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 26181912 - 26181975
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  26181912 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 26181975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 29472480 - 29472417
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  29472480 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 29472417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 38332942 - 38332879
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||| |||||| ||||||||| | ||||||    
T  38332942 aatatcagtcactatttaatcataatatcttaacaaggcataggaccaaaatgatactaataaa 38332879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 22497416 - 22497502
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    |||||||||||||||| ||| |||| ||| ||| |||| |||||| |||| ||||||||||||| |||| ||||| ||||| |||||    
T  22497416 gaattagtgtttgaataatagggtaatcacggggtgaagattagggtcgattttggagagtataggatcaaaaacagagtcaaaaag 22497502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 2148098 - 2148161
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  ||| || ||||||||| | ||||||    
T  2148098 aatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaa 2148161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 24372179 - 24372242
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||| ||||||||| | ||||||    
T  24372179 aatatcagtcacaatttaatcataatactttaaaaaggaataggaccaaaatgatactaataaa 24372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 13193219 - 13193163
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||| |||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  13193219 gtcattatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaa 13193163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 7496192 - 7496254
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||| ||||||| | |||||||||||||||| ||||||||| | ||||||    
T  7496192 aatatcggtcactatttactcataattc-ttaacaaggaataggaccaaaatgatgctaataaa 7496254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 10992089 - 10992026
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||| ||||||||||||||||||||| |||| ||||  |||||| ||||||||| | ||||||    
T  10992089 aatatttgtcactatttaatcataatatcttagcaagacataggaccaaaatgatgctaataaa 10992026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 19847531 - 19847593
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||  |||||||||||||| || ||||||||| | ||||||    
T  19847531 aatatcggtcactatttaatcataat-tcttaacaaggaatatgaccaaaatgatgctaataaa 19847593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 27473302 - 27473216
Alignment:
Q  93 aattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    ||||||||||  ||||||| ||| ||||| || | |  |||||| ||  |||||||||||||  |||||||||||||||||||||||    
T  27473302 aattagtgttataatgatagggtggtcatagggtaatgattagggtcatgtttggagagtattggatcgaaaacggagtcgaaaaga 27473216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 36713823 - 36713771
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatga 69  Q
    |||||| ||||||||| ||||||||||||||||||||| |||| | ||||||||    
T  36713823 aatatcagtcactatt-aatcataataccttaacaaggcatagaaccaaaatga 36713771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 15405968 - 15406004
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaag 52  Q
    |||||| |||||| |||||||||||||||||||||||    
T  15405968 aatatcagtcactgtttaatcataataccttaacaag 15406004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 8666 - 8603
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  8666 aatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 8603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 11858 - 11779
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagt 171  Q
    |||||||||||||||||||| |||||||||||  |||| |||||| |||||||||| |||| || | |||||||||||||    
T  11858 gaattagtgtttgaatgatagggtagtcatggagtgaagattagggtcgagtttggtgagtttagggtcgaaaacggagt 11779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 50688 - 50751
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  50688 aatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaa 50751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 24564789 - 24564710
Alignment:
Q  99 tgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||| ||| |||||||||||||||||||||||||| |||||    
T  24564789 tgtttgaatgatagggtaatcatgggataaagattagggccgattttagagagtatatgatcgaaaacggagtcaaaaag 24564710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 24605824 - 24605745
Alignment:
Q  99 tgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||| ||| |||||||||||||||||||||||||| |||||    
T  24605824 tgtttgaatgatagggtaatcatgggataaagattagggccgattttagagagtatatgatcgaaaacggagtcaaaaag 24605745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 25581555 - 25581641
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    |||||||||||  | |||||  ||| ||||||| |||| |||||| |||||||||||||||||| |||| |||||||||||||||||    
T  25581555 gaattagtgttcaattgatagtgtaatcatggggtgaagattagggtcgagtttggagagtatacgatcaaaaacggagtcgaaaag 25581641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 32948691 - 32948617
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaac 166  Q
    ||||||||||||||||||||  ||| ||||||| |||| |||||| |||| |||||||||||||||||| |||||    
T  32948691 gaattagtgtttgaatgatagtgtaatcatggggtgaagattagggtcgaatttggagagtatatgatcaaaaac 32948617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 36440412 - 36440475
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||| | ||||||    
T  36440412 aatatcagtcactatttaatcataataccttaacaatgaatatgaccaaaatgatactaataaa 36440475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 24040297 - 24040348
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaat 67  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || ||||||    
T  24040297 aatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaat 24040348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 35569992 - 35570055
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||||||| || | ||||||| | ||||||    
T  35569992 aatatcagtcactatttaatcataataacttaacaaggaataagaccgaaatgatactaataaa 35570055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 27186103 - 27186057
Alignment:
Q  24 tcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||    
T  27186103 tcactatttaatcataataccttaacaaggcataagaccaaaatgat 27186057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 34264560 - 34264614
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||| |||||||||| |||| | |||||||||    
T  34264560 aatatcagtcactatttaatcataatatcttaacaaggcatagaaccaaaatgat 34264614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 37424474 - 37424528
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||| |||||||||    
T  37424474 aatatcagtcactatttaatcataatatcttaacaaaaaataggaccaaaatgat 37424528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 29199171 - 29199227
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||||||||||| | |||| || |||||||| | ||||||    
T  29199171 gtcactatttaatcataataccttaacaaagcatagaattaaaatgatactaataaa 29199227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 2183174 - 2183118
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||||| ||||||||  ||| || ||||||||| | ||||||    
T  2183174 gtcactatttaatcataatactttaacaagatatatgaccaaaatgatactaataaa 2183118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 9989554 - 9989498
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||| |||  |||||| ||||||||| | ||||||    
T  9989554 gtcactgtttaatcataataccttaataagacataggaccaaaatgatactaataaa 9989498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 16860515 - 16860551
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaag 52  Q
    |||||| |||||||||||||||||||| |||||||||    
T  16860515 aatatcagtcactatttaatcataatatcttaacaag 16860551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 45994 - 45941
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatga 69  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  45994 aatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatga 45941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 19946 - 19883
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||||||| | ||||||    
T  19946 aatatccgtcactatttaatcataaaaccttaacaaggaatatgaccaaaatgatgctaataaa 19883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 14347 - 14410
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||| |||||||||||||||||||||||||||||||| ||| || ||||||||| | ||||||    
T  14347 aatatttgtcactatttaatcataataccttaacaaggcatatgaccaaaatgatgctaataaa 14410  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 113604 - 113541
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||| | ||||||||| | ||||||    
T  113604 aatatcagtcactatttaatcataataccttaacaaggcatagaaccaaaatgatactaataaa 113541  T

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Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 349311 - 349248
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||| |||||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  349311 aatatcagtcaatatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaa 349248  T

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Target: scaffold0246 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 6233 - 6179
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  6233 aatatcagtcactatttaatcataataccttaacaagacatatgatcaaaatgat 6179  T

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Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 24400 - 24346
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||| |||||||||||| |||| |||||||||    
T  24400 aatatccgtcactatttaatcataatatcttaacaaggaacaggaccaaaatgat 24346  T

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Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 82070 - 82124
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgat 70  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  82070 aatatcagtcactatttaatcataatatcttaacaagaaataggaccaaaatgat 82124  T

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Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 68094 - 68057
Alignment:
Q  142 gtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    |||||||||||||  |||||||||||||||||||||||    
T  68094 gtttggagagtattggatcgaaaacggagtcgaaaaga 68057  T

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Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 18511 - 18448
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||||||||||||||  ||| || ||||||||| | ||||||    
T  18511 aatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaa 18448  T

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Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 20988 - 20926
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| ||||||||||||||||||| | |||||||||||||||| ||||||||| | ||||||    
T  20988 aatatcggtcactatttaatcataattc-ttaacaaggaataggaccaaaatgatgctaataaa 20926  T

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Target: scaffold0072 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 15686 - 15623
Alignment:
Q  16 aatatctgtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||  |||||||| | ||||||    
T  15686 aatatcagtcactatttaatcataatatcttaacaaggcataggacaaaaatgatactaataaa 15623  T

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Target: scaffold0385 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 16035 - 15980
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttgg 147  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||  |||||||||    
T  16035 gaattagtgtttgaatcatagggtagtcatggagtgaatattagggccgagtttgg 15980  T

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Target: scaffold0381 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 11727 - 11813
Alignment:
Q  92 gaattagtgtttgaatgataaggtagtcatgggatgaatattaggatcgagtttggagagtatatgatcgaaaacggagtcgaaaag 178  Q
    |||||||||||| || |||||| || ||||| | |||| |||| |  |||||||||||| |||| |||||||||||| ||| |||||    
T  11727 gaattagtgtttcaacgataagataatcatgaggtgaagattacggccgagtttggagaatataggatcgaaaacggtgtcaaaaag 11813  T

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Target: scaffold0153 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 12117 - 12080
Alignment:
Q  142 gtttggagagtatatgatcgaaaacggagtcgaaaaga 179  Q
    |||||||||||||  |||||||||||||||||||||||    
T  12117 gtttggagagtattggatcgaaaacggagtcgaaaaga 12080  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 72992 - 72937
Alignment:
Q  23 gtcactatttaatcataataccttaacaaggaataggatcaaaatgattcaaataaa 79  Q
    ||||||||||||||||||| | ||||||||||||| || ||||||||| | ||||||    
T  72992 gtcactatttaatcataattc-ttaacaaggaataagaccaaaatgatgctaataaa 72937  T

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