View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19628_low_31 (Length: 367)

Name: NF19628_low_31
Description: NF19628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19628_low_31
NF19628_low_31
[»] chr8 (35 HSPs)
chr8 (10-267)||(22907218-22907476)
chr8 (106-267)||(5238184-5238346)
chr8 (106-267)||(24661252-24661414)
chr8 (106-267)||(43685643-43685805)
chr8 (9-264)||(16193723-16193980)
chr8 (14-299)||(24548986-24549272)
chr8 (14-299)||(6774219-6774505)
chr8 (10-273)||(16404973-16405235)
chr8 (10-259)||(43373480-43373731)
chr8 (21-267)||(24928795-24929043)
chr8 (21-267)||(17345581-17345828)
chr8 (139-290)||(21844541-21844692)
chr8 (139-290)||(21851934-21852085)
chr8 (139-290)||(30120854-30121005)
chr8 (139-290)||(16674361-16674512)
chr8 (146-299)||(22006223-22006377)
chr8 (244-299)||(13720893-13720947)
chr8 (209-299)||(16195433-16195522)
chr8 (244-299)||(13662230-13662284)
chr8 (244-299)||(16873016-16873070)
chr8 (244-299)||(271325-271379)
chr8 (244-299)||(644541-644595)
chr8 (244-299)||(830276-830330)
chr8 (244-299)||(15319124-15319178)
chr8 (244-299)||(15499493-15499547)
chr8 (27-121)||(23837214-23837308)
chr8 (244-299)||(22088759-22088813)
chr8 (10-196)||(222754-222943)
chr8 (10-196)||(736377-736566)
chr8 (10-196)||(860272-860461)
chr8 (315-349)||(41506706-41506740)
chr8 (214-255)||(23149985-23150026)
chr8 (214-255)||(23226076-23226117)
chr8 (315-347)||(16038785-16038817)
chr8 (315-347)||(31194216-31194248)
[»] chr4 (33 HSPs)
chr4 (10-267)||(26680201-26680459)
chr4 (10-267)||(15675093-15675352)
chr4 (106-267)||(10488659-10488821)
chr4 (106-267)||(16327930-16328092)
chr4 (10-267)||(54118248-54118507)
chr4 (10-244)||(31115629-31115865)
chr4 (10-267)||(13246430-13246689)
chr4 (74-267)||(10104254-10104449)
chr4 (139-267)||(122020-122148)
chr4 (10-290)||(10644219-10644502)
chr4 (139-267)||(13048225-13048353)
chr4 (10-290)||(47357654-47357937)
chr4 (209-267)||(33240901-33240959)
chr4 (10-108)||(111395-111493)
chr4 (146-299)||(18169107-18169261)
chr4 (247-354)||(22738509-22738616)
chr4 (244-299)||(8378388-8378442)
chr4 (74-255)||(40885570-40885753)
chr4 (244-299)||(7132030-7132084)
chr4 (146-290)||(19020623-19020769)
chr4 (244-299)||(20000960-20001014)
chr4 (244-299)||(18248455-18248509)
chr4 (262-348)||(22351979-22352065)
chr4 (27-121)||(41166083-41166177)
chr4 (10-55)||(10104449-10104494)
chr4 (34-121)||(15044851-15044938)
chr4 (244-299)||(15287210-15287264)
chr4 (244-299)||(15294319-15294373)
chr4 (244-299)||(17145622-17145676)
chr4 (9-121)||(52265645-52265758)
chr4 (214-254)||(13809511-13809551)
chr4 (57-121)||(13809647-13809711)
chr4 (239-267)||(31132545-31132573)
[»] scaffold0078 (1 HSPs)
scaffold0078 (10-267)||(37070-37328)
[»] chr7 (36 HSPs)
chr7 (10-267)||(7293017-7293275)
chr7 (106-267)||(11516324-11516486)
chr7 (106-267)||(15441568-15441730)
chr7 (106-267)||(30262133-30262295)
chr7 (10-299)||(18253808-18254098)
chr7 (10-267)||(47481035-47481294)
chr7 (15-267)||(11580743-11580997)
chr7 (10-267)||(13037018-13037277)
chr7 (12-265)||(16211768-16212023)
chr7 (10-299)||(16478923-16479213)
chr7 (10-267)||(36052667-36052923)
chr7 (10-267)||(13321014-13321275)
chr7 (10-267)||(3059966-3060225)
chr7 (139-267)||(25292342-25292470)
chr7 (139-290)||(13572808-13572959)
chr7 (209-354)||(48622575-48622720)
chr7 (139-290)||(10989541-10989692)
chr7 (140-299)||(2437590-2437748)
chr7 (147-290)||(13910993-13911136)
chr7 (244-354)||(16418734-16418844)
chr7 (143-271)||(295966-296094)
chr7 (244-354)||(10000279-10000389)
chr7 (146-299)||(15950756-15950910)
chr7 (146-299)||(18979986-18980140)
chr7 (244-348)||(15760029-15760133)
chr7 (244-299)||(13758607-13758661)
chr7 (244-299)||(14250863-14250917)
chr7 (229-267)||(14113993-14114031)
chr7 (229-267)||(14423643-14423681)
chr7 (244-299)||(7822965-7823019)
chr7 (244-299)||(7830276-7830330)
chr7 (244-299)||(15927805-15927859)
chr7 (244-299)||(27101602-27101656)
chr7 (244-299)||(27108950-27109004)
chr7 (244-299)||(27176670-27176724)
chr7 (244-299)||(38783694-38783748)
[»] chr3 (41 HSPs)
chr3 (10-264)||(16744122-16744377)
chr3 (10-267)||(17912487-17912744)
chr3 (10-267)||(15859028-15859287)
chr3 (106-267)||(2449242-2449404)
chr3 (10-299)||(15936600-15936890)
chr3 (9-267)||(51158022-51158282)
chr3 (21-271)||(13838905-13839157)
chr3 (13-299)||(15938442-15938729)
chr3 (10-267)||(14842565-14842824)
chr3 (10-267)||(2049810-2050069)
chr3 (10-267)||(12030151-12030410)
chr3 (244-354)||(44229222-44229332)
chr3 (14-299)||(15614838-15615124)
chr3 (139-267)||(13975726-13975853)
chr3 (139-267)||(45860937-45861064)
chr3 (139-267)||(13954894-13955021)
chr3 (139-290)||(55316351-55316502)
chr3 (192-353)||(54651642-54651803)
chr3 (139-290)||(41270207-41270358)
chr3 (10-290)||(16821139-16821422)
chr3 (10-299)||(12264757-12265049)
chr3 (209-267)||(19231982-19232040)
chr3 (146-347)||(12902006-12902209)
chr3 (10-119)||(47984650-47984759)
chr3 (10-119)||(48003224-48003333)
chr3 (146-299)||(25058876-25059030)
chr3 (146-299)||(49232573-49232727)
chr3 (244-299)||(18911230-18911284)
chr3 (244-299)||(22275446-22275500)
chr3 (10-119)||(47993937-47994046)
chr3 (10-119)||(48012510-48012619)
chr3 (244-299)||(15468305-15468359)
chr3 (244-299)||(18897009-18897063)
chr3 (214-255)||(14080715-14080756)
chr3 (244-299)||(1467704-1467758)
chr3 (244-289)||(12812078-12812123)
chr3 (192-267)||(11986170-11986245)
chr3 (244-286)||(5228550-5228591)
chr3 (225-267)||(19260827-19260869)
chr3 (315-351)||(13839201-13839237)
chr3 (315-351)||(30153266-30153302)
[»] scaffold0141 (2 HSPs)
scaffold0141 (106-271)||(22637-22803)
scaffold0141 (106-267)||(26892-27054)
[»] chr5 (38 HSPs)
chr5 (106-267)||(20623066-20623228)
chr5 (106-267)||(21233532-21233694)
chr5 (109-267)||(37052844-37053003)
chr5 (10-267)||(18531071-18531330)
chr5 (106-267)||(16536294-16536456)
chr5 (10-267)||(22053837-22054096)
chr5 (106-267)||(25900410-25900571)
chr5 (10-267)||(23506965-23507224)
chr5 (10-267)||(27182551-27182810)
chr5 (21-267)||(34939289-34939536)
chr5 (139-299)||(29188245-29188404)
chr5 (10-299)||(25426628-25426919)
chr5 (141-290)||(27009975-27010124)
chr5 (10-290)||(4199954-4200237)
chr5 (10-299)||(12374-12665)
chr5 (10-299)||(18777953-18778244)
chr5 (10-299)||(22366442-22366733)
chr5 (139-299)||(19500031-19500190)
chr5 (10-299)||(21073556-21073847)
chr5 (139-286)||(43443368-43443515)
chr5 (146-348)||(23514698-23514902)
chr5 (146-299)||(10777935-10778089)
chr5 (244-299)||(1219485-1219539)
chr5 (244-299)||(35791063-35791117)
chr5 (244-299)||(7425561-7425615)
chr5 (244-299)||(11212030-11212084)
chr5 (244-299)||(17471553-17471607)
chr5 (244-300)||(36989734-36989789)
chr5 (244-299)||(21932346-21932400)
chr5 (244-299)||(21938516-21938570)
chr5 (244-299)||(35582273-35582327)
chr5 (10-121)||(23493917-23494029)
chr5 (244-299)||(22883049-22883103)
chr5 (192-267)||(32950879-32950954)
chr5 (316-349)||(2032135-2032168)
chr5 (214-255)||(21310709-21310750)
chr5 (214-255)||(23981516-23981557)
chr5 (57-121)||(7728466-7728530)
[»] chr2 (33 HSPs)
chr2 (106-267)||(19689405-19689567)
chr2 (106-267)||(23820168-23820330)
chr2 (10-267)||(36982445-36982704)
chr2 (106-267)||(14906444-14906606)
chr2 (10-267)||(19794708-19794967)
chr2 (106-267)||(20015108-20015270)
chr2 (10-267)||(24341393-24341652)
chr2 (10-267)||(25265394-25265653)
chr2 (15-267)||(462743-462997)
chr2 (10-267)||(8891242-8891501)
chr2 (10-267)||(43642961-43643220)
chr2 (244-354)||(21142132-21142242)
chr2 (10-267)||(20627317-20627576)
chr2 (139-267)||(17396657-17396784)
chr2 (10-271)||(7507844-7508107)
chr2 (10-299)||(19886622-19886913)
chr2 (244-354)||(5888539-5888649)
chr2 (146-299)||(12728529-12728683)
chr2 (146-299)||(34824612-34824766)
chr2 (244-299)||(8944083-8944137)
chr2 (244-299)||(42177934-42177988)
chr2 (209-299)||(23778010-23778099)
chr2 (244-351)||(12641554-12641661)
chr2 (244-299)||(3798568-3798622)
chr2 (244-290)||(12635841-12635887)
chr2 (244-299)||(11231303-11231357)
chr2 (244-299)||(16935830-16935884)
chr2 (244-299)||(17006490-17006544)
chr2 (244-299)||(22513150-22513204)
chr2 (244-299)||(24685746-24685800)
chr2 (244-299)||(28775772-28775826)
chr2 (27-87)||(9636761-9636821)
chr2 (43-87)||(24884718-24884762)
[»] scaffold0195 (2 HSPs)
scaffold0195 (10-267)||(19206-19465)
scaffold0195 (10-267)||(21290-21549)
[»] scaffold0124 (1 HSPs)
scaffold0124 (106-267)||(1586-1748)
[»] chr1 (22 HSPs)
chr1 (106-267)||(51452589-51452751)
chr1 (10-267)||(20445679-20445938)
chr1 (10-267)||(20931345-20931604)
chr1 (10-267)||(20531444-20531703)
chr1 (10-267)||(20893630-20893889)
chr1 (10-264)||(41394222-41394478)
chr1 (10-267)||(20913037-20913289)
chr1 (10-299)||(22227809-22228099)
chr1 (10-299)||(22232506-22232796)
chr1 (10-267)||(37844454-37844714)
chr1 (14-299)||(2116258-2116545)
chr1 (139-299)||(45051554-45051713)
chr1 (139-290)||(5072357-5072508)
chr1 (139-290)||(18601087-18601238)
chr1 (244-299)||(46523626-46523680)
chr1 (244-299)||(17148804-17148858)
chr1 (244-299)||(18059723-18059777)
chr1 (244-348)||(22035684-22035788)
chr1 (244-299)||(17004875-17004929)
chr1 (244-299)||(19962464-19962518)
chr1 (245-290)||(38055064-38055109)
chr1 (214-255)||(22143361-22143402)
[»] scaffold0026 (3 HSPs)
scaffold0026 (10-299)||(107747-108037)
scaffold0026 (139-290)||(64492-64648)
scaffold0026 (214-256)||(89863-89905)
[»] scaffold0025 (2 HSPs)
scaffold0025 (10-267)||(8849-9108)
scaffold0025 (10-267)||(148721-148980)
[»] scaffold0266 (2 HSPs)
scaffold0266 (10-267)||(1124-1383)
scaffold0266 (12-267)||(3586-3843)
[»] scaffold0077 (1 HSPs)
scaffold0077 (10-267)||(36917-37176)
[»] scaffold0049 (1 HSPs)
scaffold0049 (10-267)||(48187-48446)
[»] scaffold0175 (1 HSPs)
scaffold0175 (10-267)||(960-1218)
[»] scaffold0132 (1 HSPs)
scaffold0132 (10-267)||(13506-13765)
[»] scaffold0023 (4 HSPs)
scaffold0023 (10-267)||(48598-48857)
scaffold0023 (139-290)||(36225-36376)
scaffold0023 (244-299)||(153972-154026)
scaffold0023 (220-299)||(169873-169951)
[»] scaffold0302 (1 HSPs)
scaffold0302 (10-267)||(12115-12372)
[»] chr6 (33 HSPs)
chr6 (21-267)||(23153458-23153706)
chr6 (10-267)||(35009443-35009702)
chr6 (14-267)||(14626122-14626377)
chr6 (21-267)||(1657752-1657999)
chr6 (14-299)||(1650066-1650352)
chr6 (21-267)||(15862484-15862730)
chr6 (10-299)||(25175563-25175854)
chr6 (139-299)||(16825713-16825874)
chr6 (74-300)||(29665937-29666166)
chr6 (10-299)||(27653944-27654235)
chr6 (146-348)||(1556142-1556346)
chr6 (146-299)||(16232029-16232183)
chr6 (244-299)||(13620759-13620813)
chr6 (244-299)||(18086788-18086842)
chr6 (10-113)||(27740838-27740941)
chr6 (188-267)||(27751605-27751684)
chr6 (244-348)||(29869691-29869795)
chr6 (244-299)||(22225703-22225757)
chr6 (244-299)||(22251531-22251585)
chr6 (244-299)||(23978006-23978060)
chr6 (244-290)||(19610255-19610301)
chr6 (243-299)||(16556104-16556159)
chr6 (243-299)||(16632660-16632715)
chr6 (244-299)||(10488936-10488990)
chr6 (244-299)||(16376338-16376392)
chr6 (244-299)||(16383662-16383716)
chr6 (244-299)||(19299474-19299528)
chr6 (27-120)||(18381821-18381914)
chr6 (214-255)||(16887792-16887833)
chr6 (214-255)||(33324898-33324939)
chr6 (214-255)||(35136013-35136054)
chr6 (10-97)||(22361926-22362014)
chr6 (57-121)||(25367374-25367438)
[»] scaffold0011 (1 HSPs)
scaffold0011 (10-267)||(123168-123427)
[»] scaffold0529 (1 HSPs)
scaffold0529 (14-299)||(2966-3253)
[»] scaffold0001 (2 HSPs)
scaffold0001 (21-267)||(171916-172164)
scaffold0001 (21-267)||(177619-177867)
[»] scaffold0413 (1 HSPs)
scaffold0413 (10-267)||(6068-6326)
[»] scaffold0125 (1 HSPs)
scaffold0125 (10-267)||(41648-41907)
[»] scaffold0772 (1 HSPs)
scaffold0772 (139-271)||(5660-5792)
[»] scaffold0218 (1 HSPs)
scaffold0218 (10-267)||(5065-5324)
[»] scaffold0162 (2 HSPs)
scaffold0162 (10-267)||(26419-26678)
scaffold0162 (10-267)||(8184-8440)
[»] scaffold0106 (1 HSPs)
scaffold0106 (14-267)||(41733-41988)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-267)||(247446-247694)
scaffold0012 (244-351)||(34070-34177)
[»] scaffold0008 (2 HSPs)
scaffold0008 (10-267)||(128173-128431)
scaffold0008 (147-290)||(31644-31787)
[»] scaffold1542 (1 HSPs)
scaffold1542 (10-267)||(538-797)
[»] scaffold0215 (2 HSPs)
scaffold0215 (14-290)||(9318-9596)
scaffold0215 (14-290)||(16216-16494)
[»] scaffold0498 (1 HSPs)
scaffold0498 (10-265)||(8878-9135)
[»] scaffold0075 (1 HSPs)
scaffold0075 (10-267)||(34464-34724)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-260)||(272031-272277)
[»] scaffold0420 (1 HSPs)
scaffold0420 (139-299)||(13286-13445)
[»] scaffold0022 (2 HSPs)
scaffold0022 (10-290)||(5185-5466)
scaffold0022 (214-254)||(102923-102963)
[»] scaffold0018 (1 HSPs)
scaffold0018 (139-267)||(51186-51314)
[»] scaffold0066 (2 HSPs)
scaffold0066 (10-349)||(54416-54759)
scaffold0066 (74-349)||(45094-45373)
[»] scaffold0369 (1 HSPs)
scaffold0369 (10-299)||(3722-4013)
[»] scaffold0028 (3 HSPs)
scaffold0028 (139-267)||(89458-89586)
scaffold0028 (220-267)||(107788-107835)
scaffold0028 (214-255)||(79745-79786)
[»] scaffold0516 (1 HSPs)
scaffold0516 (244-354)||(12036-12146)
[»] scaffold1711 (1 HSPs)
scaffold1711 (139-290)||(1273-1424)
[»] scaffold0116 (1 HSPs)
scaffold0116 (139-286)||(167-314)
[»] scaffold0017 (1 HSPs)
scaffold0017 (244-354)||(54111-54221)
[»] scaffold0139 (2 HSPs)
scaffold0139 (142-299)||(21077-21233)
scaffold0139 (139-299)||(14023-14181)
[»] scaffold0076 (2 HSPs)
scaffold0076 (10-299)||(42997-43288)
scaffold0076 (244-299)||(39340-39394)
[»] scaffold0467 (1 HSPs)
scaffold0467 (146-353)||(10249-10458)
[»] scaffold0003 (1 HSPs)
scaffold0003 (244-354)||(7446-7556)
[»] scaffold0622 (1 HSPs)
scaffold0622 (10-108)||(9382-9480)
[»] scaffold0892 (1 HSPs)
scaffold0892 (244-354)||(3650-3765)
[»] scaffold1500 (1 HSPs)
scaffold1500 (244-299)||(1479-1533)
[»] scaffold0092 (1 HSPs)
scaffold0092 (244-299)||(10713-10767)
[»] scaffold0107 (2 HSPs)
scaffold0107 (244-290)||(39883-39929)
scaffold0107 (244-299)||(31546-31600)
[»] scaffold0383 (1 HSPs)
scaffold0383 (244-299)||(2629-2683)
[»] scaffold0361 (2 HSPs)
scaffold0361 (188-267)||(3370-3449)
scaffold0361 (12-64)||(3210-3262)
[»] scaffold0213 (1 HSPs)
scaffold0213 (244-299)||(29399-29453)
[»] scaffold0761 (1 HSPs)
scaffold0761 (246-299)||(1540-1592)
[»] scaffold0183 (1 HSPs)
scaffold0183 (244-348)||(6834-6938)
[»] scaffold0084 (1 HSPs)
scaffold0084 (146-267)||(56103-56226)
[»] scaffold0191 (1 HSPs)
scaffold0191 (244-299)||(7421-7475)
[»] scaffold0456 (2 HSPs)
scaffold0456 (214-255)||(1546-1587)
scaffold0456 (214-255)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (214-255)||(8216-8257)
[»] scaffold0104 (1 HSPs)
scaffold0104 (10-99)||(48514-48603)
[»] scaffold0058 (1 HSPs)
scaffold0058 (214-255)||(70307-70348)
[»] scaffold0006 (1 HSPs)
scaffold0006 (34-121)||(197390-197477)
[»] scaffold0409 (2 HSPs)
scaffold0409 (217-255)||(1348-1386)
scaffold0409 (217-255)||(9603-9641)
[»] scaffold0032 (2 HSPs)
scaffold0032 (10-87)||(104793-104871)
scaffold0032 (214-255)||(93773-93814)
[»] scaffold0970 (1 HSPs)
scaffold0970 (27-88)||(2471-2532)
[»] scaffold0151 (1 HSPs)
scaffold0151 (214-255)||(22422-22463)
[»] scaffold0700 (1 HSPs)
scaffold0700 (34-98)||(2548-2612)
[»] scaffold0389 (1 HSPs)
scaffold0389 (214-254)||(10868-10908)


Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 22907476 - 22907218
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907476 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 22907377  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||    
T  22907376 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 22907277  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907276 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 22907218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 5238184 - 5238346
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 5238346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 24661414 - 24661252
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 24661252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 43685643 - 43685805
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 43685805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 9 - 264
Target Start/End: Complemental strand, 16193980 - 16193723
Alignment:
Q  9 acatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | |||||     
T  16193980 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 16193881  T
Q  109 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    | ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| |||    
T  16193880 ttaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaatta 16193781  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16193780 tcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaat 16193723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 24548986 - 24549272
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  24548986 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 24549085  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  24549086 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 24549185  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||| ||||| |||  |||||||||| |||||  |||| ||||||||||||||||||||||| |||||||||    
T  24549186 aattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaa-catgagaaa 24549272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 6774505 - 6774219
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  6774505 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 6774406  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  6774405 aataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 6774306  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||| ||||| |||  |||||||||| |||||  |||| |||||||||||||||||||| || |||||||||    
T  6774305 aattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatataa-catgagaaa 6774219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 273
Target Start/End: Complemental strand, 16405235 - 16404973
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||| || |||||||| |  |||||||||||||| |||||| |||| || ||| ||||||||||| ||||||||||||  ||||||    
T  16405235 catcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatt 16405136  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  16405135 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 16405039  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatca 273  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||    
T  16405038 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatca 16404973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 43373731 - 43373480
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | | ||||||||| |||||||||| | ||||| |    
T  43373731 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaat 43373632  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | ||||    
T  43373631 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattat 43373532  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
     |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  43373531 catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagca 43373480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 21 - 267
Target Start/End: Complemental strand, 24929043 - 24928795
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||     
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  121 tgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  | ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  24928943 tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 24928844  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  24928843 gcatacaaacatataatcacagttggagcacgaatttagcaacaattat 24928795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 17345581 - 17345828
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| || ||||| || |||||||||||| ||||||||| | | |||     
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  17345680 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 17345779  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||| ||||||| ||||| |||| |||||||||||| |||||||||||    
T  17345780 gcatataaacataacatcacagttagagcacgaatttcgcaacaattat 17345828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 21844692 - 21844541
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||  ||  |||| |||||||||||| |||||||||||    
T  21844592 agcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaac 21844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 21852085 - 21851934
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||  ||  |||| |||||||||||| |||||||||||    
T  21851985 agcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaac 21851934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 30120854 - 30121005
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||||||  |||| ||||||||| ||||||||||||||    
T  30120954 agcaagagcacgaatttagcatgaattgttcatcaactcattttcatacaac 30121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 16674512 - 16674361
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||||||  |||| |||| |||||||||||||||||||    
T  16674412 agaaagagcacgaatttagcatgaattgttcaacaacccattttcatacaac 16674361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 22006377 - 22006223
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  22006377 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 22006278  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22006277 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 22006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 13720947 - 13720893
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13720947 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 13720893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 16195433 - 16195522
Alignment:
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |  |||||| ||||| ||   ||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  16195433 atcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 16195522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 13662284 - 13662230
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  13662284 gagcacgaatttagcaacaattgtttatcaacccattttcatacaa-catgagaaa 13662230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 16873070 - 16873016
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  16873070 gagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaa 16873016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 271379 - 271325
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  271379 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 271325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 644541 - 644595
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  644541 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 644595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 830276 - 830330
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  830276 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 830330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 15319178 - 15319124
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  15319178 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 15319124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 15499547 - 15499493
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  15499547 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 15499493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 23837214 - 23837308
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837214 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 22088813 - 22088759
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||| ||||||||||||| |||||||||    
T  22088813 gagcacgaatttaacaacaattgttcaccaacacattttcatacaa-catgagaaa 22088759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 222943 - 222754
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  222943 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 222844  T
Q  110 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 196  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  222843 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 736566 - 736377
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  736566 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 736467  T
Q  110 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 196  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  736466 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 860461 - 860272
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  860461 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 860362  T
Q  110 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 196  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  860361 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 349
Target Start/End: Complemental strand, 41506740 - 41506706
Alignment:
Q  315 tgattatgatgaaaacaaacccccttaccttagat 349  Q
    |||||||||||||||| ||||||||||||||||||    
T  41506740 tgattatgatgaaaactaacccccttaccttagat 41506706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 16038817 - 16038785
Alignment:
Q  315 tgattatgatgaaaacaaacccccttaccttag 347  Q
    ||||||||||||| |||||||||||||||||||    
T  16038817 tgattatgatgaagacaaacccccttaccttag 16038785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 31194248 - 31194216
Alignment:
Q  315 tgattatgatgaaaacaaacccccttaccttag 347  Q
    |||||||||||||||| ||||||||||||||||    
T  31194248 tgattatgatgaaaactaacccccttaccttag 31194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 26680201 - 26680459
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680201 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 26680300  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| |||||    
T  26680301 caactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattatt 26680400  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680401 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 26680459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 15675352 - 15675093
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  15675352 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 15675253  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  15675252 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 15675153  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15675152 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 15675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 10488659 - 10488821
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 10488821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 16328092 - 16327930
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 16327930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 54118507 - 54118248
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||     
T  54118507 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataactaaatc 54118408  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  54118407 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattat 54118308  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  54118307 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattat 54118248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 31115629 - 31115865
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  31115629 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 31115728  T
Q  110 caactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| ||||    
T  31115729 caacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattat 31115828  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttgg 244  Q
     ||||||||||||||||||||||||||||| ||||||    
T  31115829 catcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 13246430 - 13246689
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  13246430 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 13246529  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  13246530 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 13246629  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  13246630 cattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattat 13246689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 267
Target Start/End: Complemental strand, 10104449 - 10104254
Alignment:
Q  74 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 171  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| ||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  172 ttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattat 10104254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 122020 - 122148
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    ||||||||||| |||||||||||||||||    
T  122120 agttggagcacaaatttagcaacaattat 122148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 290
Target Start/End: Original strand, 10644219 - 10644502
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  10644219 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 10644318  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  10644319 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaatta 10644418  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    | ||||||||||||||||||||||| ||||| ||   ||||||||||||  ||  |||| ||||||||||||||||||||||||    
T  10644419 tcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 10644502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 13048353 - 13048225
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |    
T  13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga 13048254  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||| ||||||||||||||||||    
T  13048253 agttggagcatgaatttagcaacaattat 13048225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 290
Target Start/End: Original strand, 47357654 - 47357937
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||  |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  47357654 catcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 47357753  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  47357754 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 47357853  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
      |||||| |||||||||||||||| ||||| ||   ||||||||||||||||  |||| ||||||||||||||||||||||||    
T  47357854 acatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 47357937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 33240901 - 33240959
Alignment:
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 33240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 111395 - 111493
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  111395 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 18169107 - 18169261
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  18169107 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 18169206  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  18169207 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 18169261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 354
Target Start/End: Original strand, 22738509 - 22738616
Alignment:
Q  247 cacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa-tgaaattttttgaattgattatgatgaaaacaaacccccttacctt 345  Q
    |||||||||| || ||||| ||| ||| |||||||||||||||| |||||||| || ||   ||  |||||||||||||||| |||||||||||||||||    
T  22738509 cacgaatttaacatcaattgttcctcagcccattttcatacaac-atgagaaaatgcaaaaattgaaattgattatgatgaagacaaacccccttacctt 22738607  T
Q  346 agatgatgt 354  Q
    |||||||||    
T  22738608 agatgatgt 22738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 8378388 - 8378442
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  8378388 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 8378442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 255
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  74 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- 170  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  171 tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 7132084 - 7132030
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  7132084 gagcacgaatttagcaacaattgttcatcaacccattttcatataa-catgagaaa 7132030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 290
Target Start/End: Original strand, 19020623 - 19020769
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  19020623 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 19020722  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  19020723 gagcacgaatttagcaagaattgttcatcaacccattttcatacaac 19020769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 20000960 - 20001014
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  20000960 gagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaa 20001014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 18248455 - 18248509
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||    
T  18248455 gagcacgaatttaacatcaattgttcatcaacccattttcatacaa-catgagaaa 18248509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 22352065 - 22351979
Alignment:
Q  262 aattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttaccttaga 348  Q
    |||| |||||||||||||||||||||||| ||||||| ||| ||  |||  ||||||||||||| | ||| |||||||||||||||||    
T  22352065 aattgttcatcaacccattttcatacaac-atgagaagatgtaaaatttgaaattgattatgataataactaacccccttaccttaga 22351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||| |||||||| | ||||||||||||| ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166177 tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 10104494 - 10104449
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaac 55  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||    
T  10104494 catcatcaattcatgaatatgtatacccaagcaatgattcatcaac 10104449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
Q  34 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 15287264 - 15287210
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| | |||| ||||||| ||||||||||||||| |||||||||    
T  15287264 gagcacgaatttagctataattgttcatcatcccattttcatacaa-catgagaaa 15287210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 15294373 - 15294319
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| | |||| ||||||| ||||||||||||||| |||||||||    
T  15294373 gagcacgaatttagctataattgttcatcatcccattttcatacaa-catgagaaa 15294319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 17145676 - 17145622
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| || ||||| ||||||||| ||||||||||||| |||||||||    
T  17145676 gagcacgaatttaacatcaattgttcatcaactcattttcatacaa-catgagaaa 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 52265758 - 52265645
Alignment:
Q  9 acatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 107  Q
    ||||||||||  ||||||| ||| | |||||| | |||| ||||||||  ||| |||  |||||| ||||||||||||||| ||| ||||| || | |||    
T  52265758 acatcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 52265659  T
Q  108 ttcaactacaacat 121  Q
    |||||| |||||||    
T  52265658 ttcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 254  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
Q  57 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13809711 acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 267
Target Start/End: Original strand, 31132545 - 31132573
Alignment:
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||    
T  31132545 agttggagcacgaatttagcaacaattat 31132573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 37328 - 37070
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37328 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatc 37229  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||    
T  37228 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 37129  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 37070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 7293017 - 7293275
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293017 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 7293116  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||    
T  7293117 caacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 7293216  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293217 attaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 7293275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 11516324 - 11516486
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 11516486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 15441730 - 15441568
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 15441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 30262295 - 30262133
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 30262133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 18254098 - 18253808
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  18254098 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 18253999  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  18253998 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 18253899  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  18253898 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaa-catgagaaa 18253808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 47481294 - 47481035
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| |||||||    
T  47481294 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaatt 47481195  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  47481194 caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 47481096  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  47481095 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattat 47481035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 11580997 - 11580743
Alignment:
Q  15 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 114  Q
    ||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  11580997 tcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 11580898  T
Q  115 acaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatca 212  Q
    ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||    
T  11580897 acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatca 11580798  T
Q  213 attcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  11580797 attcatgcatacaaacatattatcacagttggagcacgaatttagcaataattat 11580743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 13037277 - 13037018
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  ||  | ||||| ||||| |||||||||||| ||||||     
T  13037277 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatc 13037178  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  13037177 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattat 13037078  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13037077 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 13037018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 16211768 - 16212023
Alignment:
Q  12 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 111  Q
    |||| ||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||  |||||||||| | ||||| | |    
T  16211768 tcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaatta 16211867  T
Q  112 actacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 209  Q
    || ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| |    
T  16211868 acaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatca 16211967  T
Q  210 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 265  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16211968 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt 16212023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 16479213 - 16478923
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| |    
T  16479213 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaat 16479114  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  16479113 taaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 16479014  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
     ||||||||||||||||||||||| ||||  |||  |||||||||| || ||  |||| ||||||||||||||||||||||| |||||||||    
T  16479013 catcaattcatgcatacaaacataacatcgcagtaagagcacgaatctaacatgaattgttcatcaacccattttcatacaa-catgagaaa 16478923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 36052667 - 36052923
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | ||||||||||||| |||||||||| | ||||| |    
T  36052667 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaat 36052766  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | ||||    
T  36052767 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattat 36052863  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||||||||||||||| |||||||| |||||||| |  |||||||||||||||||    
T  36052864 catcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattat 36052923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 13321014 - 13321275
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||| || | ||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  13321014 catcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 13321113  T
Q  110 caacta-caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacact 204  Q
    |||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  ||||||| ||| | ||||||||||||||| |    
T  13321114 caacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaat 13321212  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  13321213 tatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattat 13321275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 3059966 - 3060225
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||     
T  3059966 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatc 3060065  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |||| |||| |||||||  || |||||||| || || |||||| ||||||||| |||||| ||| | ||||||| |  |||| |||    
T  3060066 taacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatta 3060164  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    | ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  3060165 tcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattat 3060225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 25292470 - 25292342
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    ||||||||||| |||||||||||||||||    
T  25292370 agttggagcacaaatttagcaacaattat 25292342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 13572808 - 13572959
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||  ||  |||| ||||||||||||||||||||||||    
T  13572908 agcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 13572959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 209 - 354
Target Start/End: Complemental strand, 48622720 - 48622575
Alignment:
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa-tgaaattt 307  Q
    ||||||||||||| |  || ||||||||| |||  |||||||||||||||| ||||| ||||||||||||||||| || ||| |||||||| || ||       
T  48622720 atcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcgtaaaac-atgagaaaatgcaaaaa 48622622  T
Q  308 tttgaattgattatgatgaaaacaaacccccttaccttagatgatgt 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48622621 tttgaattgattatgatgaaaacaaacccccttaccttagatgatgt 48622575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 10989541 - 10989692
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||||||  | || ||||||||||||||||||||||||    
T  10989641 agcaagagcacgaatttagcatgatttgttcatcaacccattttcatacaac 10989692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 299
Target Start/End: Original strand, 2437590 - 2437748
Alignment:
Q  140 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 239  Q
    |||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  240 gttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
        ||||||||||||||||| |||| ||||| | ||||||||||||||| |||||||||    
T  2437690 acaagagcacgaatttagcaagaattgttcattatcccattttcatacaa-catgagaaa 2437748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 290
Target Start/End: Complemental strand, 13911136 - 13910993
Alignment:
Q  147 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 246  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  247 cacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||||||||||||  |||| ||||||||| ||||||||||||||    
T  13911036 cacgaatttagcatgaattgttcatcaactcattttcatacaac 13910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 16418734 - 16418844
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||  ||  |||| |||||||||||||||||||||||| ||||||| ||| ||  |||  |||||||||||||||||||||||||||||||    
T  16418734 gagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgagaagatgtaaaatttgaaattgattatgatgaaaacaaacccccttac 16418832  T
Q  343 cttagatgatgt 354  Q
    ||||||||||||    
T  16418833 cttagatgatgt 16418844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 271
Target Start/End: Complemental strand, 296094 - 295966
Alignment:
Q  143 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 242  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  243 ggagcacgaatttagcaacaattattcat 271  Q
     || |||||||||||||||||||||||||    
T  295994 agaacacgaatttagcaacaattattcat 295966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 10000389 - 10000279
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||  ||  |||| |||||||||||||||| ||||||| ||||||| ||| ||  |||  |||||||||||||||| ||||||||||||||    
T  10000389 gagcacgaatttgacataaattgttcatcaacccatttttatacaac-atgagaagatgcaaaatttgaaattgattatgatgaagacaaacccccttac 10000291  T
Q  343 cttagatgatgt 354  Q
    ||||||||||||    
T  10000290 cttagatgatgt 10000279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 15950910 - 15950756
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  15950910 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 15950811  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  15950810 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 15950756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 18980140 - 18979986
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  18980140 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 18980041  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  18980040 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 18979986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 15760133 - 15760029
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||||| ||   ||  |  |||||||||||| ||| |||||||||||    
T  15760133 gagcacgaatttagcaataattgttcatcaacccattttcatacaa-catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttac 15760035  T
Q  343 cttaga 348  Q
    ||||||    
T  15760034 cttaga 15760029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 13758607 - 13758661
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  13758607 gagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaa 13758661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 14250917 - 14250863
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  14250917 gagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 14250863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 14114031 - 14113993
Alignment:
Q  229 atatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattat 14113993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 14423681 - 14423643
Alignment:
Q  229 atatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattat 14423643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 7822965 - 7823019
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  7822965 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 7823019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 7830276 - 7830330
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  7830276 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 7830330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 15927805 - 15927859
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||    
T  15927805 gagcacgaatttagcaacaattgatcatcaatccattttcatacaa-catgagaaa 15927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 27101656 - 27101602
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  27101656 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 27101602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 27109004 - 27108950
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  27109004 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 27108950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 27176670 - 27176724
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  27176670 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 27176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 38783748 - 38783694
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  38783748 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 38783694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 16744377 - 16744122
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16744377 catcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 16744278  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||||||||||||||    
T  16744277 caactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttatt 16744178  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  16744177 atcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaat 16744122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 17912744 - 17912487
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||| |||| ||| ||||||||||||||||    
T  17912744 catcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaatt 17912645  T
Q  110 caactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| ||||     
T  17912644 caactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatc 17912545  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17912544 atcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattat 17912487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 15859287 - 15859028
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||||    
T  15859287 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatt 15859188  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| ||||    
T  15859187 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattat 15859088  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15859087 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 15859028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 2449404 - 2449242
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 2449242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 15936890 - 15936600
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  15936890 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 15936791  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  15936790 taacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 15936691  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  15936690 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaa-catgagaaa 15936600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 9 - 267
Target Start/End: Complemental strand, 51158282 - 51158022
Alignment:
Q  9 acatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  51158282 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 51158183  T
Q  109 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  51158182 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 51158083  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51158082 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 51158022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 13838905 - 13839157
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||||| ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| |||||     
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  13839005 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 13839104  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcat 271  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13839105 gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcat 13839157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 15938729 - 15938442
Alignment:
Q  13 catcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaa 112  Q
    |||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||    
T  15938729 catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa 15938630  T
Q  113 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
    | ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||    
T  15938629 caacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcat 15938530  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||  |||||||||||||| | |||||||||||| |||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  15938529 caattcatgattacaaacatatcattacagttggagcacgtatttagtaacaattgttcatcaacccattttcatacaa-catgagaaa 15938442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 14842824 - 14842565
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  14842824 catcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 14842725  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  14842724 taacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattat 14842625  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14842624 cttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 14842565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 2049810 - 2050069
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | | ||||||||| |||| ||||| | ||||| |    
T  2049810 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaat 2049909  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  2049910 taacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattat 2050009  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  2050010 catcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattat 2050069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 12030410 - 12030151
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| || | | | ||||||||| |||||||||| |  |||| |    
T  12030410 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaat 12030311  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  12030310 taacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattat 12030211  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12030210 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 12030151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 44229222 - 44229332
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaatgaaattttttgaattgattatgatgaaaacaaacccccttacc 343  Q
    ||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  44229222 gagcacggatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaaaaatttgaattgattatgatgaaaacaaacccccttacc 44229321  T
Q  344 ttagatgatgt 354  Q
    |||||||||||    
T  44229322 ttagatgatgt 44229332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 15614838 - 15615124
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  15614838 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 15614937  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||| || |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||    
T  15614938 aataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatc 15615037  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||| ||| || || |||  |||||| ||| |||||  |||| ||||||||||||||||||||||| |||||||||    
T  15615038 aattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaa-catgagaaa 15615124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 13975853 - 13975726
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||    
T  13975754 agttggagcacgaatttagcaacaattat 13975726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 45860937 - 45861064
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||    
T  45861036 agttggagcacgaatttagcaacaattat 45861064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 13955021 - 13954894
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13954923  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||    
T  13954922 agttggagcacgaatttagcaacaattat 13954894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 55316351 - 55316502
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||||||  |||| ||||||||||||||||||||||||    
T  55316451 agcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 55316502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 353
Target Start/End: Original strand, 54651642 - 54651803
Alignment:
Q  192 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaacc 291  Q
    ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||||||||||||||||||||||||||| |    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaa-c 54651740  T
Q  292 atgagaaa-tgaaattttttgaattgattatgatgaaaacaaacccccttaccttagatgatg 353  Q
    |||||||| || ||   ||  |  ||||||||||||| |||||||||||||||||||||||||    
T  54651741 atgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttaccttagatgatg 54651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 41270207 - 41270358
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||||||  |||| ||||||||||||||||||||||||    
T  41270307 agcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 41270358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 290
Target Start/End: Original strand, 16821139 - 16821422
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||| |||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  16821139 catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 16821238  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  16821239 caacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16821338  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    | ||||||| ||||||||||||||| ||||| ||   ||||||| ||||  ||  |||| ||||||||||||||||||||||||    
T  16821339 tcatcaatttatgcatacaaacataacatcacagcaagagcacggatttgacataaattgttcatcaacccattttcatacaac 16821422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 12265049 - 12264757
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||| | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| ||    
T  12265049 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 12264950  T
Q  110 caactacaacatgtcaaa--ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacact 204  Q
    |||| ||||||| |||||  |||||| |||  | | ||| | ||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  |    
T  12264949 caacaacaacatatcaaaatttcatcaattaagtataatct-cataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccat 12264851  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
     || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  12264850 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 12264757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 19231982 - 19232040
Alignment:
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattat 19232040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 347
Target Start/End: Complemental strand, 12902209 - 12902006
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  12902209 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaa 12902110  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||   ||  |  |||||||||||| ||| |||||||||||    
T  12902109 gagcacgaatttagcaaaaattattcatcaacccattttcatacaa-catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttac 12902011  T
Q  343 cttag 347  Q
    |||||    
T  12902010 cttag 12902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 47984650 - 47984759
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47984650 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47984749  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  47984750 caacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 48003224 - 48003333
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48003224 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48003323  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  48003324 caacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 25058876 - 25059030
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  25058876 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 25058975  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  25058976 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 25059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 49232573 - 49232727
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  49232573 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 49232672  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  49232673 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 49232727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 18911230 - 18911284
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  18911230 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 18911284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 22275446 - 22275500
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22275446 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 22275500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 47993937 - 47994046
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47993937 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47994036  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  47994037 caacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 48012510 - 48012619
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48012510 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48012609  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  48012610 caacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 15468359 - 15468305
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  15468359 gagcacgaatttagcaacaattgttcctcaacccattttcatacaa-catgagaaa 15468305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 18897063 - 18897009
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  18897063 gagcacgaatttatcaacaattgttcatcaacccattttcatacaa-catgagaaa 18897009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 1467758 - 1467704
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  1467758 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 1467704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 12812078 - 12812123
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaa 289  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||    
T  12812078 gagcacgaatttaacaacaattgtccatcaacccattttcatacaa 12812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 11986245 - 11986170
Alignment:
Q  192 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| ||||||||||    
T  11986245 acaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattat 11986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 5228550 - 5228591
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcata 286  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  5228550 gagcacgaatttagcaacaa-tgttcatcaacccattttcata 5228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 19260869 - 19260827
Alignment:
Q  225 aaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||| | || ||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattat 19260827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 13839201 - 13839237
Alignment:
Q  315 tgattatgatgaaaacaaacccccttaccttagatga 351  Q
    ||||||||||||| || ||||||||||||||||||||    
T  13839201 tgattatgatgaagactaacccccttaccttagatga 13839237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 30153266 - 30153302
Alignment:
Q  315 tgattatgatgaaaacaaacccccttaccttagatga 351  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  30153266 tgattatgataaaaactaacccccttaccttagatga 30153302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 22637 - 22803
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcat 22803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 26892 - 27054
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 27054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 20623066 - 20623228
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 20623228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 21233694 - 21233532
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 21233532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 109 - 267
Target Start/End: Original strand, 37052844 - 37053003
Alignment:
Q  109 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 37053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 18531330 - 18531071
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||| | | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  18531330 catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 18531231  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  18531230 caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 18531132  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18531131 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 18531071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 16536294 - 16536456
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 16536456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 22054096 - 22053837
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  22054096 catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 22053997  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  |||    
T  22053996 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactat 22053897  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  22053896 catcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattat 22053837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 25900571 - 25900410
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 25900410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 23506965 - 23507224
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  23506965 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 23507064  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  23507065 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 23507164  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23507165 catcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattat 23507224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 27182810 - 27182551
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||| ||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  27182810 catcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 27182711  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  27182710 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattat 27182611  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  27182610 catcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattat 27182551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 34939289 - 34939536
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | |  ||     
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  34939388 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 34939487  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| ||||    
T  34939488 gcatacaaacataacatcacagttagagcacgaatttagcaacagttat 34939536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 299
Target Start/End: Complemental strand, 29188404 - 29188245
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||  |||||||||| |||||  |||| |||||| |||||||||||||||| |||||||||    
T  29188304 agtaagagcacgaatctagcatgaattgttcatcgacccattttcatacaa-catgagaaa 29188245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 25426628 - 25426919
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25426628 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25426727  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  25426728 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25426827  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||    
T  25426828 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 25426919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 290
Target Start/End: Original strand, 27009975 - 27010124
Alignment:
Q  141 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 240  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  241 ttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
       ||||||||||||  ||  |||| ||||||||||||||||||||||||    
T  27010075 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 27010124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 290
Target Start/End: Complemental strand, 4200237 - 4199954
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||| ||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  4200237 catcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 4200138  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||    
T  4200137 caacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 4200038  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
      ||||||||||||||||||||||| ||||| |    ||||||||||||||||  |||||||||||||| ||||||||||||||    
T  4200037 acatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattattcatcaactcattttcatacaac 4199954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 12374 - 12665
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  12374 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 12473  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  12474 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 12573  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||    
T  12574 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 12665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 18778244 - 18777953
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | ||  ||  | ||||||| ||| |||||||||| | ||||| |    
T  18778244 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaat 18778145  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  18778144 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 18778045  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||| ||  |||| ||||||||||||||||||||||| |||||||||    
T  18778044 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaacccattttcatacaa-catgagaaa 18777953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 22366733 - 22366442
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  22366733 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaat 22366634  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  22366633 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 22366534  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||  ||||  |||||||||||||||||||||| |||||||||    
T  22366533 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgctcatcaacccattttcatacaa-catgagaaa 22366442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 299
Target Start/End: Original strand, 19500031 - 19500190
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||   ||||||||||||||||  || | ||||||||||||||||||||||| |||||||||    
T  19500131 agcaagagcacgaatttagcatgaagtgttcatcaacccattttcatacaa-catgagaaa 19500190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 21073847 - 21073556
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  21073847 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaat 21073748  T
Q  110 caactacaacatgtca--aattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |   |  |||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  21073747 taacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 21073648  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||| ||||||||||||||||||| ||||| ||   ||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||    
T  21073647 acatccattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcattaacccattttcatacaa-catgagaaa 21073556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 286
Target Start/End: Complemental strand, 43443515 - 43443368
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcata 286  Q
    ||   ||||||||||||| ||  |||| |||||||| |||||||||||    
T  43443415 agcaagagcacgaatttaacatgaattgttcatcaatccattttcata 43443368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 23514698 - 23514902
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  23514698 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 23514797  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||   ||  |  |||||||||||| ||| |||||||||||    
T  23514798 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttac 23514896  T
Q  343 cttaga 348  Q
    ||||||    
T  23514897 cttaga 23514902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 10778089 - 10777935
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  10778089 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 10777990  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  10777989 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 10777935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 1219539 - 1219485
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1219539 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 1219485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 35791117 - 35791063
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  35791117 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 35791063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 7425561 - 7425615
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  7425561 gagcacgaatttagcaataattgttcatcaacccattttcatacaa-catgagaaa 7425615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 11212084 - 11212030
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  11212084 gagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 11212030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 17471607 - 17471553
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  17471607 gagcacgaatttatcaacaattgttcatcaacccattttcatacaa-catgagaaa 17471553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 36989789 - 36989734
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaat 300  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| ||||||||||    
T  36989789 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaat 36989734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 21932400 - 21932346
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  21932400 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 21932346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 21938570 - 21938516
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  21938570 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 21938516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 35582273 - 35582327
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  35582273 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 35582327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 23493917 - 23494029
Alignment:
Q  10 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    |||||||||  ||||||| ||| | |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||    
T  23493917 catcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 23494016  T
Q  109 tcaactacaacat 121  Q
    ||||| |||||||    
T  23494017 tcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 22883103 - 22883049
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||| |||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  22883103 gagcacaaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 22883049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 32950879 - 32950954
Alignment:
Q  192 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| ||||||||||    
T  32950879 acaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaattat 32950954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Original strand, 2032135 - 2032168
Alignment:
Q  316 gattatgatgaaaacaaacccccttaccttagat 349  Q
    ||||||||||||||| ||||||||||||||||||    
T  2032135 gattatgatgaaaactaacccccttaccttagat 2032168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
Q  57 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 2e-65; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 19689567 - 19689405
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 19689405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 23820168 - 23820330
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 23820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 36982704 - 36982445
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  36982704 catcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaatt 36982605  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| ||||    
T  36982604 caacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattat 36982505  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  36982504 catcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattat 36982445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 14906606 - 14906444
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 14906444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 19794967 - 19794708
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| |||| |   || ||||||||||| |||||||||||| |||||||    
T  19794967 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaatt 19794868  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  19794867 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 19794768  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  19794767 tatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattat 19794708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 20015108 - 20015270
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattat 20015270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 24341652 - 24341393
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||   |||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  24341652 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 24341553  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| ||||    
T  24341552 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattat 24341453  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  24341452 catcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattat 24341393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 25265653 - 25265394
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  25265653 catcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 25265554  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  25265553 caacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 25265454  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  25265453 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattat 25265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 462743 - 462997
Alignment:
Q  15 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 114  Q
    ||||| |||||||||| |||||||| | ||||||||||||  || ||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  462743 tcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 462842  T
Q  115 acaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
    ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||    
T  462843 acaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatc 462941  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  462942 aattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattat 462997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 8891242 - 8891501
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||     
T  8891242 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 8891341  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  |||||||||||||| ||||    
T  8891342 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattat 8891441  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  8891442 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattat 8891501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 43643220 - 43642961
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| |  ||||||||||||||||||||| |||| || ||| | ||||||||| |||||||||||| ||||| |    
T  43643220 catcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaat 43643121  T
Q  110 caactacaac-atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  43643120 taataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 43643021  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  43643020 catcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattat 43642961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 21142132 - 21142242
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaatgaaattttttgaattgattatgatgaaaacaaacccccttacc 343  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21142132 gagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaaatttttgaattgattatgatgaaaacaaacccccttacc 21142231  T
Q  344 ttagatgatgt 354  Q
    |||||||||||    
T  21142232 ttagatgatgt 21142242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 20627576 - 20627317
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||  |||||||| | ||||||||||||| |||||| | |||| || | | || |||||||| |||||||| | | ||||| |    
T  20627576 catcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaat 20627477  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||  ||||| ||| | ||||||||||||||| ||||    
T  20627476 taacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattat 20627377  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  20627376 catcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattat 20627317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 17396784 - 17396657
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||    
T  17396685 agttggagcacgaatttagcaacaattat 17396657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 7508107 - 7507844
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat 108  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||    
T  7508107 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 7508008  T
Q  109 tcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 205  Q
    | ||| ||||| | | |||||||| ||| |||  ||||||||||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  7508007 t-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 7507910  T
Q  206 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcat 271  Q
    || ||||||||||||| |  || ||| ||||| |    ||||||||||||||||| ||||||||||    
T  7507909 atcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaataattattcat 7507844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 19886913 - 19886622
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  19886913 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 19886814  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  19886813 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 19886714  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||    
T  19886713 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 19886622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 5888649 - 5888539
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||  ||  |||| |||||||||||||||||||||||| ||||||| ||| ||  |||  |||||||||||||||||||||||||||||||    
T  5888649 gagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgagaagatgtaaaatttgaaattgattatgatgaaaacaaacccccttac 5888551  T
Q  343 cttagatgatgt 354  Q
    ||||||||||||    
T  5888550 cttagatgatgt 5888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 12728529 - 12728683
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  12728529 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 12728628  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  12728629 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 12728683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 34824612 - 34824766
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  34824612 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 34824711  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  34824712 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 34824766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 8944083 - 8944137
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  8944083 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 8944137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 42177988 - 42177934
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  42177988 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 42177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 23778099 - 23778010
Alignment:
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||  || ||| ||||| ||   ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  23778099 atcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 23778010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 12641661 - 12641554
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||| ||||| ||   ||  |  |||||||||| | ||| |||||||||||    
T  12641661 gagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttac 12641563  T
Q  343 cttagatga 351  Q
    |||||||||    
T  12641562 cttagatga 12641554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 3798622 - 3798568
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  3798622 gagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaa 3798568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 12635887 - 12635841
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  12635887 gagcacgaatttagcaacaattgttcatcaacctattttcatacaac 12635841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 11231357 - 11231303
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  11231357 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 11231303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 16935830 - 16935884
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  16935830 gagcatgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 16935884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 17006490 - 17006544
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  17006490 gagcatgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 17006544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 22513204 - 22513150
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  22513204 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 22513150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 24685800 - 24685746
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  24685800 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 24685746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 28775826 - 28775772
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  28775826 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 28775772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 9636761 - 9636821
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 87  Q
    |||| |||||||||| |||| |||||||| |||| |||| ||| || ||||||||||||||    
T  9636761 tatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt 9636821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
Q  43 atgattcatcaactacaacatctattagcatcaacaacatcaatt 87  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||    
T  24884718 atgaatcatcaacaacaatatctattagcaacaacaacatcaatt 24884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 19206 - 19465
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  19206 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 19305  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  19306 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 19405  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19406 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 19465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 21290 - 21549
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  21290 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 21389  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  21390 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 21489  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21490 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 21549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 1748 - 1586
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 1586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 4e-63; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 51452589 - 51452751
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattat 51452751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 20445679 - 20445938
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | |||||    
T  20445679 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20445778  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| ||||    
T  20445779 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20445878  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  20445879 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattat 20445938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 20931345 - 20931604
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||| ||| |||||||||| ||||||||   || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  20931345 catcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 20931444  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| ||||    
T  20931445 taacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20931544  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20931545 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 20931604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 20531444 - 20531703
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | |||||    
T  20531444 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20531543  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| ||||    
T  20531544 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20531643  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  20531644 catcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattat 20531703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 20893889 - 20893630
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||  ||||||||| |||||||||| ||||||||||||| |||||||| |||| ||   | ||||||||||| ||||||||||||  |||||     
T  20893889 catcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatc 20893790  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  20893789 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattat 20893690  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  20893689 catcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattat 20893630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 41394222 - 41394478
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | |||||      
T  41394222 catcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaca 41394321  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| ||||    
T  41394322 taacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattat 41394421  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
     ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41394422 catcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaat 41394478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 20913037 - 20913289
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| ||||||||||      ||||    
T  20913037 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca------aatt 20913130  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| ||||    
T  20913131 -aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20913229  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20913230 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 20913289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 22227809 - 22228099
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22227809 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22227908  T
Q  110 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||||    
T  22227909 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22228008  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
     ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  22228009 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 22228099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 22232506 - 22232796
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22232506 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22232605  T
Q  110 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||||    
T  22232606 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22232705  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
     ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  22232706 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 22232796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 37844714 - 37844454
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  37844714 catcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatc 37844615  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttca-taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |||| |||||  |||  |||||||||||| ||  || |||||| | | || || |||||| ||| | ||||||||||||||| |||    
T  37844614 taacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatta 37844515  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  37844514 tcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattat 37844454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 2116258 - 2116545
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagc-tcaattcaa 112  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| |   |||| | ||    
T  2116258 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaaattaa 2116357  T
Q  113 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
    | | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||    
T  2116358 caataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 2116457  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||||||||| ||||| |||   ||||||||| |||||  |||| |||||||||||||||| |||||| |||||||||    
T  2116458 caattcatgcatacaaacataacatcacagtaaaagcacgaatctagcatgaattgttcatcaacccatttttatacaa-catgagaaa 2116545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 299
Target Start/End: Original strand, 45051554 - 45051713
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||  || ||||||| |||||  |||| ||||||||||||||||||||||| |||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaa-catgagaaa 45051713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 5072508 - 5072357
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||||||  |||| ||||||||||||||||||||||||    
T  5072408 agcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 5072357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 18601238 - 18601087
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||| ||||||||||  |||| ||||||||||||||||||||||||    
T  18601138 agcaagagcatgaatttagcatgaattgttcatcaacccattttcatacaac 18601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 46523626 - 46523680
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  46523626 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 46523680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 17148804 - 17148858
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  17148804 gagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaa 17148858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 18059777 - 18059723
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  18059777 gagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 18059723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 22035684 - 22035788
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||  ||  |||| ||||||||||||||||||||||| |||||||| ||| ||  |||  ||||||||||||| | ||| |||||||||||    
T  22035684 gagcacgaatttgacatgaattgttcatcaacccattttcatacaa-catgagaagatgtaaaatttgaaattgattatgataataactaacccccttac 22035782  T
Q  343 cttaga 348  Q
    ||||||    
T  22035783 cttaga 22035788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 17004875 - 17004929
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  17004875 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 17004929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 19962518 - 19962464
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||| |||||||||    
T  19962518 gagcacgaatttaacaacaattgtccatcaacccattttcatacaa-catgagaaa 19962464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 38055109 - 38055064
Alignment:
Q  245 agcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||    
T  38055109 agcacgaatttaacaacaattgttcaccaacccattttcatacaac 38055064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 116; Significance: 6e-59; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 107747 - 108037
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  107747 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 107846  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| ||||    
T  107847 taacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattat 107946  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  107947 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaa-catgagaaa 108037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 64648 - 64492
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc 233  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  234 atcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||| ||   ||||||||||||  ||  |||| ||||||||||||||||||||||||    
T  64548 atcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 64492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 256  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 116; Significance: 6e-59; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 8849 - 9108
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| ||||  | ||| ||||||||||| |||  ||||||| |||||||    
T  8849 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt 8948  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  8949 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 9048  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  9049 catcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattat 9108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 148721 - 148980
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||  |||||||| | ||||||||||||| ||||| || |||| || | | ||||||||||| |||||||||| | ||||| |    
T  148721 catcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 148820  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  148821 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 148920  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  148921 catcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattat 148980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 1124 - 1383
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| | |||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  1124 catcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 1223  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  1224 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1323  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1324 tatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattat 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 267
Target Start/End: Complemental strand, 3843 - 3586
Alignment:
Q  12 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 111  Q
    |||||||||||| |||||| |||||||| | || |||| ||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |    
T  3843 tcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaatta 3744  T
Q  112 actacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 209  Q
    || ||||| |  |||| |   ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |    
T  3743 acaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatca 3644  T
Q  210 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3643 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 3586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 37176 - 36917
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||| ||||||| |||||| ||||| ||||||     
T  37176 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatc 37077  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| ||||    
T  37076 caaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattat 36977  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  36976 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattat 36917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 48187 - 48446
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  48187 catcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaat 48286  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  48287 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 48386  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  48387 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattat 48446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 1218 - 960
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | |||||  |||| |||| | ||||||| ||| |||||||| | | |||||||    
T  1218 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaatt 1119  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||||| |||  |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  1118 -aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1020  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1019 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 13506 - 13765
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  13506 catcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 13605  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| |||||||  |||| |||||| |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  13606 caacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 13705  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13706 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattat 13765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 48598 - 48857
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||     
T  48598 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 48697  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  48698 tagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattat 48797  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48798 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 48857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 36225 - 36376
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||| |||||||||||| |||||     
T  36225 gcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatcac 36324  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
         ||||||||||||||||  |||| |||||||||||| |||||||||||    
T  36325 tacaagagcacgaatttagcatgaattgttcatcaacccagtttcatacaac 36376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 154026 - 153972
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  154026 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 153972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 169951 - 169873
Alignment:
Q  220 catacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||| ||||| ||   ||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||    
T  169951 catacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 169873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 12115 - 12372
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||| ||  | |||||| |||| |||  | ||||||||||| |||||||||| | |||||||    
T  12115 catcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaatt 12214  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
      || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| ||||    
T  12215 --acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattat 12312  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12313 catcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattat 12372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 23153458 - 23153706
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||||||||||||   ||||||||||||| |||||||| |||| || | | || |||||||| |||||||||||| ||||||  ||| |||||     
T  23153458 catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact 23153557  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  23153558 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 23153657  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  23153658 gcatacaaacatatcatcacagttggagcacgaatttagaaacaattat 23153706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 35009702 - 35009443
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  35009702 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 35009603  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  35009602 caacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 35009503  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||    
T  35009502 catcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattat 35009443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 14626377 - 14626122
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | ||||| | |||    
T  14626377 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaac 14626278  T
Q  114 tacaacatgtca-aattcatccatttgcaca--attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
     ||||| |  || |||||| ||| |||||||  ||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||    
T  14626277 aacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 14626179  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||||||    
T  14626178 caattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattat 14626122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 21 - 267
Target Start/End: Complemental strand, 1657999 - 1657752
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | |||     
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  1657900 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 1657801  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||| |||||||| ||||| |||| ||||||||||||||||||||||||    
T  1657800 gcatccaaacataacatcacagttagagcacgaatttagcaacaattat 1657752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 1650352 - 1650066
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  1650352 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 1650253  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  1650252 cataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 1650153  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||||| || ||||| |||  |||||||||| |||||  |||| ||||||||||||||||||||||| |||||||||    
T  1650152 aattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaa-catgagaaa 1650066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 15862484 - 15862730
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | |||     
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  15862582 tagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 15862681  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||||||    
T  15862682 gcatacaaacataacatcacagttagagcacgaatttagtaacaattat 15862730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 25175563 - 25175854
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25175563 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25175662  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  25175663 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25175762  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||||||||||||||||||||||| || || ||   ||||||||||||||||  |||| |||||||| |||||||||||||| |||||||||    
T  25175763 acatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaa-catgagaaa 25175854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 299
Target Start/End: Complemental strand, 16825874 - 16825713
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatc 236  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||    
T  16825874 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatc 16825775  T
Q  237 aaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    | ||   ||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||    
T  16825774 acagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 16825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 74 - 300
Target Start/End: Original strand, 29665937 - 29666166
Alignment:
Q  74 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 171  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  172 tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattc 269  Q
    ||  ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| |||||||||| |    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  270 atcaacccattttcatacaaccatgagaaat 300  Q
    |||| |||||||||||||||| |||||||||    
T  29666136 atcaccccattttcatacaacaatgagaaat 29666166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 27654235 - 27653944
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||| |||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| | | |||||||||| | ||||| |    
T  27654235 catcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaat 27654136  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  27654135 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 27654036  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      |||||||||||||||||| |||| ||||| ||   ||||||||||||||||  | || |||||||| |||||||||||||| |||||||||    
T  27654035 acatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagcatgatttgttcatcaatccattttcatacaa-catgagaaa 27653944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 1556142 - 1556346
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  1556142 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 1556241  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||   ||  |  |||||||||||| ||| |||||||||||    
T  1556242 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttac 1556340  T
Q  343 cttaga 348  Q
    ||||||    
T  1556341 cttaga 1556346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 16232029 - 16232183
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||| ||||| ||       
T  16232029 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaa 16232128  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  16232129 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 16232183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 13620813 - 13620759
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13620813 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 13620759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 18086842 - 18086788
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  18086842 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 18086788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 27740838 - 27740941
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||||| |||||||||| || ||||||||   ||  | |||| |||||||||| ||| |||||||| |||||||    
T  27740838 catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt 27740937  T
Q  110 caac 113  Q
    ||||    
T  27740938 caac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 27751605 - 27751684
Alignment:
Q  188 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| ||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttat 27751684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 29869795 - 29869691
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||  ||  |||| ||||||||||||||||||||||| |||||||| ||| ||  |||| ||||||||||||| | ||| |||||||||||    
T  29869795 gagcacgaatttgacatgaattgttcatcaacccattttcatacaa-catgagaagatgtaaaattttaaattgattatgataataactaacccccttac 29869697  T
Q  343 cttaga 348  Q
    ||||||    
T  29869696 cttaga 29869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 22225757 - 22225703
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  22225757 gagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 22225703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 22251585 - 22251531
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  22251585 gagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 22251531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 23978006 - 23978060
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  23978006 gagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaa 23978060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 19610255 - 19610301
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  19610255 gagcacgaatttagcaataattgttcatcaacccattttcatacaac 19610301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 16556159 - 16556104
Alignment:
Q  243 ggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  16556159 ggagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 16632715 - 16632660
Alignment:
Q  243 ggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  16632715 ggagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16632660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 10488936 - 10488990
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  10488936 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 10488990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 16376392 - 16376338
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  16376392 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16376338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 16383716 - 16383662
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  16383716 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16383662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 19299474 - 19299528
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||| |||||||||    
T  19299474 gagcacgaatttaacaacaattgtccatcaacccattttcatacaa-catgagaaa 19299528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 18381914 - 18381821
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381914 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 22362014 - 22361926
Alignment:
Q  10 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 97  Q
    |||||||||| ||||||| ||| | |||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| ||||    
T  22362014 catcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
Q  57 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 123427 - 123168
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||     
T  123427 catcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatc 123328  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  123327 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 123228  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  123227 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattat 123168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 2966 - 3253
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaattcaa 112  Q
    |||||| |||||||||| |||| ||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||||||    
T  2966 atcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaa 3065  T
Q  113 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
    | ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||    
T  3066 caacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 3165  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||| ||||||||||| ||||| ||   ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  3166 caattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 171916 - 172164
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  172016 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  172116 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttat 172164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 177619 - 177867
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  177719 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     |||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  177819 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttat 177867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 6326 - 6068
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | ||||   |||| |||| | ||||||| ||| |||||||||| | |||||||    
T  6326 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaatt 6227  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  6226 -aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 6128  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6127 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 6068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 41648 - 41907
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||  ||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  41648 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt 41747  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| |||||||  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  41748 caacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 41846  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||    
T  41847 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattat 41907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 5660 - 5792
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  239 agttggagcacgaatttagcaacaattattcat 271  Q
    |||||||||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaattattcat 5792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 5324 - 5065
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |     
T  5324 catcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 5225  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| ||||    
T  5224 taacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattat 5125  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  5124 catcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattat 5065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 26678 - 26419
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| ||| |||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |     
T  26678 catcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 26579  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| ||||    
T  26578 taacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattat 26479  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26478 catcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 26419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 8440 - 8184
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  8440 catcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 8341  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    ||||   |||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| ||||    
T  8340 caac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattat 8244  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  8243 caccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattat 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 41733 - 41988
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | ||||||||||| |||||||| | |||| || | | | ||||||||| |||||||||||| ||||||  |||    
T  41733 atcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaac 41832  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     ||||| |  |||| |||| | |||  |||||||||||| || || |||||| ||||||||| | |||| ||| | |||||||||   ||| |||| |||    
T  41833 aacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatc 41932  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41933 aattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 41988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 21 - 267
Target Start/End: Complemental strand, 247694 - 247446
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||  ||| |||||     
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  121 tgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |   ||| |||  ||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| ||||||||||    
T  247594 tagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcat 247495  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  247494 gcatacaaacatatcattacagttggagcacgaatttagcaacaattat 247446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 34177 - 34070
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||| ||   ||  |  ||||||||||||| || |||||||||||    
T  34177 gagcacgaatttagcaacaatttttcatcaaccca-tttcatacaacaatgagaaaatgcaaaaattgaacatgattatgatgaagactaacccccttac 34079  T
Q  343 cttagatga 351  Q
    |||||||||    
T  34078 cttagatga 34070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 128431 - 128173
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||||    
T  128431 catcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctcaatt 128332  T
Q  110 caactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |   ||| |||  ||||||||||| |||||  ||  | |||| |||| |||||| ||| | |||||||||| |||| ||||    
T  128331 -aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattat 128233  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  128232 catcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattat 128173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 290
Target Start/End: Complemental strand, 31787 - 31644
Alignment:
Q  147 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 246  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||      |||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatcaccacaagag 31688  T
Q  247 cacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||||||||||||  |||| ||||||||| ||||||||||||||    
T  31687 cacgaatttagcatgaattgttcatcaactcattttcatacaac 31644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 797 - 538
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| | |||||||| |||||||| | ||||||||||||| |||||||| ||||||| | | ||||||||||  |||||||||||| || |||     
T  797 catcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatc 698  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  697 taacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 598  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  597 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattat 538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 290
Target Start/End: Complemental strand, 9596 - 9318
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  9596 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 9497  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  9496 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 9397  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||||||||||||||||||| ||||| ||    |||||||||||  ||  |||| ||||||||||||||||||||||||    
T  9396 aattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaac 9318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 290
Target Start/End: Complemental strand, 16494 - 16216
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  16494 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 16395  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  16394 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 16295  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||||||||||||||||||| ||||| ||    |||||||||||  ||  |||| ||||||||||||||||||||||||    
T  16294 aattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaac 16216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 265
Target Start/End: Original strand, 8878 - 9135
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  8878 catcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 8977  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||| |||||| || |||||| ||| | |||||||||| |||| ||||    
T  8978 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattat 9077  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 265  Q
     ||| ||||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  9078 catcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaatt 9135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 34724 - 34464
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat 108  Q
    ||||||||||||||||||||| ||||||||    |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||    
T  34724 catcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 34625  T
Q  109 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    ||||| ||||| |  |||| |||| | |||  | |||||||||| ||||||  |||| |||| | || |||||| ||| | ||||||||||||||| |||    
T  34624 tcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaatta 34525  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||    
T  34524 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattat 34464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 260
Target Start/End: Original strand, 272031 - 272277
Alignment:
Q  16 caatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta 115  Q
    |||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| |    
T  272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
Q  116 caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaa 213  Q
    |||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||    
T  272131 caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa 272230  T
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 260  Q
    ||||| |||||||||||||||| | |||||||| ||| |||||||||    
T  272231 ttcattcatacaaacatatcattacagttggagtacgtatttagcaa 272277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 299
Target Start/End: Complemental strand, 13445 - 13286
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    | |  |||||||||| |||||  |||| ||||||||||||||||||||||| |||||||||    
T  13345 actaagagcacgaatctagcatgaattgttcatcaacccattttcatacaa-catgagaaa 13286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 290
Target Start/End: Complemental strand, 5466 - 5185
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||| ||  |||||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  5466 catcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 5368  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| |||||    |||| |||| ||| |||  ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  5367 taacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 5269  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    | ||||||||||||| |  || ||| ||||| ||   ||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  5268 tcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaacccattttcatacaac 5185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 254  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 51314 - 51186
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||    
T  51214 agttggagcacgaatttagcaacaattat 51186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 54416 - 54759
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||| |||||||||||||||   |||||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| ||    
T  54416 catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 54515  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacactt 205  Q
    |||| ||||||| ||||| |||| | |||  | ||||||| ||||||||  ||||| |||||| ||  ||||||| ||| | ||| ||||||||||| ||    
T  54516 caacaacaacatatcaaaattcaccaattgagtacaattt-cataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaatt 54614  T
Q  206 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa-tgaaa 304  Q
    || ||||||||||||| |  || ||| ||||| ||   |  |||||||||| ||||||||||||||||||||||||||||||||| |||||||| || ||    
T  54615 atcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttcatacaacaatgagaaattgcaa 54714  T
Q  305 ttttttgaattgattatgatgaaaacaaacccccttaccttagat 349  Q
    |  ||  |  ||||||||||||| || |||| |||||||||||||    
T  54715 taattgaacatgattatgatgaagactaaccaccttaccttagat 54759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 349
Target Start/End: Original strand, 45094 - 45373
Alignment:
Q  74 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 171  Q
    ||||||||||||| | ||| |||||| | |||| |||||| ||||||| ||||| |||| | |||  | ||||||| || |||||  ||||| ||||||     
T  45094 caacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaattt-caaaacttgacatttatacatac 45192  T
Q  172 tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattc 269  Q
    ||  ||||||| ||| | ||| ||||||||||| |||| ||||||||||||| |  || ||| ||||| |    | ||||||||||| ||||||||||||    
T  45193 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattc 45292  T
Q  270 atcaacccattttcatacaaccatgagaaa-tgaaattttttgaattgattatgatgaaaacaaacccccttaccttagat 349  Q
    ||||||||||||||||||||| |||||||| || |||  ||  |  ||||||||||||| || ||||||||||||||||||    
T  45293 atcaacccattttcatacaacaatgagaaattgcaataattgaacatgattatgatgaagactaacccccttaccttagat 45373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 3722 - 4013
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | ||||||   || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  3722 catcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 3821  T
Q  110 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |||| |||| | ||| | |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| |||    
T  3822 taacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaatta 3921  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    | ||||||||||||| |  || ||| ||||| |    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  3922 tcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 4013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 89586 - 89458
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  239 agttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||||||||||||||||    
T  89486 agttggagcacgaatttagcaacaattat 89458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 107835 - 107788
Alignment:
Q  220 catacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattat 107788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 12146 - 12036
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaatgaaattttttgaattgattatgatgaaaacaaacccccttacc 343  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||| | ||| ||||||||||||    
T  12146 gagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaaaatttgaaattgattatgataataactaacccccttacc 12047  T
Q  344 ttagatgatgt 354  Q
    |||||||||||    
T  12046 ttagatgatgt 12036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 1424 - 1273
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    ||   ||||||||||||||||  |||| ||||||||||||||||||||||||    
T  1324 agcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 1273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 286
Target Start/End: Original strand, 167 - 314
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcata 286  Q
    ||   ||||||||||||  ||  |||| ||||||||||||||||||||    
T  267 agcaagagcacgaatttgacatgaattgttcatcaacccattttcata 314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 54111 - 54221
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa-tgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||| || ||   |||||||||||||||||||||||||||||||||||    
T  54111 gagcacgaatttagcatcaattgttcatcaacccattttcataaaac-atgagaaaatgcaaaaatttgaattgattatgatgaaaacaaacccccttac 54209  T
Q  343 cttagatgatgt 354  Q
    ||||||||||||    
T  54210 cttagatgatgt 54221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 299
Target Start/End: Complemental strand, 21233 - 21077
Alignment:
Q  142 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 241  Q
    |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  242 tggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
      ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  21133 aagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 21077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 299
Target Start/End: Complemental strand, 14181 - 14023
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||     
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatcac 14082  T
Q  239 agttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||   ||||||| ||||||||| |||| | ||||||||||||||||||||| |||||||||    
T  14081 agcaagagcacg-atttagcaagaattgtgcatcaacccattttcatacaa-catgagaaa 14023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 299
Target Start/End: Original strand, 42997 - 43288
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||| |||||| | ||||| |    
T  42997 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaat 43096  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  43097 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 43196  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    | ||||||||||||||| ||||||| ||||  ||   ||||||||||||  ||  ||||  |||||||||||||||||||||| |||||||||    
T  43197 tcatcaattcatgcatagaaacataacatcccagcaagagcacgaatttgacatgaattgctcatcaacccattttcatacaa-catgagaaa 43288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 39340 - 39394
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  39340 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 39394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 353
Target Start/End: Complemental strand, 10458 - 10249
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||| |||| |||||  | || ||||||||||||| |  || ||||||||| ||       
T  10458 tttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaa 10359  T
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||   ||  |  ||||||||| ||| ||||||||||||||    
T  10358 gagcacgaatttagcaacaattattcatcaacccattttcatacaa-catgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttac 10260  T
Q  343 cttagatgatg 353  Q
    |||||||||||    
T  10259 cttagatgatg 10249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 7446 - 7556
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||  ||  |||| |||||||||||||||||||||||| ||||||| ||| ||  |||  |||||||||||||||||||||||||||||||    
T  7446 gagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgagaagatgtaaaatttgaaattgattatgatgaaaacaaacccccttac 7544  T
Q  343 cttagatgatgt 354  Q
    ||||||||||||    
T  7545 cttagatgatgt 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 9382 - 9480
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  9382 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 3650 - 3765
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgag-aaatgaaattttttgaattgattatgatg-----aaaacaaacccc 337  Q
    |||||| ||||||||| ||||| |||||||||||||||||||| || |||||| ||||| ||   ||||||||||||||||||     ||||||||||||    
T  3650 gagcactaatttagcatcaattgttcatcaacccattttcata-aaacatgagaaaatgcaaaaatttgaattgattatgatgaaaacaaaacaaacccc 3748  T
Q  338 cttaccttagatgatgt 354  Q
     ||||||||||||||||    
T  3749 attaccttagatgatgt 3765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 1533 - 1479
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1533 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 1479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 10767 - 10713
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  10767 gagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 10713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 39883 - 39929
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaac 290  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  39883 gagcacgaatttagcaacaattgttcatcaacccattttcatacaac 39929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 31546 - 31600
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  31546 gagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 31600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 2629 - 2683
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||    
T  2629 gagcacgaattgagcaacaattgttcatcaacccattttcatacaa-catgagaaa 2683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 3370 - 3449
Alignment:
Q  188 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 267  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattat 3449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 3210 - 3262
Alignment:
Q  12 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 64  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||  ||||||||    
T  3210 tcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatc 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 29399 - 29453
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  29399 gagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 29453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 1592 - 1540
Alignment:
Q  246 gcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1592 gcacgattttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 1540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 6834 - 6938
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaa-atgaaattttttgaattgattatgatgaaaacaaacccccttac 342  Q
    ||||||||||||  ||  |||| ||||||||||||||||||||||| |||||||| ||| ||  |||  ||||||||||||| | ||| |||||||||||    
T  6834 gagcacgaatttgacatgaattgttcatcaacccattttcatacaa-catgagaagatgtaaaatttgaaattgattatgataataactaacccccttac 6932  T
Q  343 cttaga 348  Q
    ||||||    
T  6933 cttaga 6938  T

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Target: scaffold0084 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 267
Target Start/End: Complemental strand, 56226 - 56103
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  244 gagcacgaatttagcaacaattat 267  Q
    ||||||||||||| ||||||||||    
T  56126 gagcacgaatttaacaacaattat 56103  T

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Target: scaffold0191 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 7475 - 7421
Alignment:
Q  244 gagcacgaatttagcaacaattattcatcaacccattttcatacaaccatgagaaa 299  Q
    |||||||||||||| || |||| ||||||||||||||||||||||| |||||||||    
T  7475 gagcacgaatttagtaataattgttcatcaacccattttcatacaa-catgagaaa 7421  T

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Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

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Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 48514 - 48603
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatca 99  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | |||||||| || ||||||||||    
T  48514 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 197477 - 197390
Alignment:
Q  34 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
T  197477 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacat 197390  T

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Target: scaffold0409 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  217 atgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  217 atgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 104871 - 104793
Alignment:
Q  10 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 87  Q
    |||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||    
T  104871 catcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

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Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

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Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 2471 - 2532
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 88  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| |||||||||||||||    
T  2471 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 2548 - 2612
Alignment:
Q  34 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc 98  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||    
T  2548 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 10868 - 10908
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 254  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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