View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19628_low_5 (Length: 660)

Name: NF19628_low_5
Description: NF19628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19628_low_5
NF19628_low_5
[»] chr2 (50 HSPs)
chr2 (1-644)||(35397488-35398129)
chr2 (12-391)||(2869424-2869802)
chr2 (1-328)||(14698801-14699127)
chr2 (12-350)||(31056031-31056371)
chr2 (27-333)||(2837814-2838124)
chr2 (1-328)||(21629921-21630250)
chr2 (1-318)||(13569305-13569624)
chr2 (1-328)||(33118113-33118440)
chr2 (1-328)||(33528416-33528741)
chr2 (1-357)||(20522197-20522554)
chr2 (12-327)||(39482919-39483237)
chr2 (83-328)||(40014983-40015229)
chr2 (2-328)||(34388836-34389156)
chr2 (83-312)||(15903698-15903928)
chr2 (224-348)||(36757536-36757658)
chr2 (1-328)||(17865180-17865510)
chr2 (12-368)||(34682086-34682443)
chr2 (27-350)||(8040063-8040392)
chr2 (224-328)||(10445259-10445363)
chr2 (12-328)||(8389941-8390259)
chr2 (224-328)||(28258969-28259073)
chr2 (15-328)||(10707044-10707358)
chr2 (224-328)||(23078263-23078367)
chr2 (122-213)||(28770682-28770774)
chr2 (224-328)||(40739035-40739139)
chr2 (67-208)||(27149207-27149349)
chr2 (122-282)||(18674238-18674401)
chr2 (12-170)||(10445394-10445553)
chr2 (10-213)||(1345449-1345654)
chr2 (226-314)||(3491955-3492045)
chr2 (231-333)||(1344331-1344435)
chr2 (234-314)||(25409842-25409924)
chr2 (226-313)||(9296202-9296292)
chr2 (122-170)||(11690515-11690565)
chr2 (122-170)||(42362366-42362416)
chr2 (122-172)||(723848-723900)
chr2 (122-208)||(41586464-41586549)
chr2 (122-170)||(11151695-11151745)
chr2 (122-170)||(14202509-14202559)
chr2 (122-170)||(14633930-14633980)
chr2 (122-170)||(24885675-24885725)
chr2 (122-170)||(34139875-34139925)
chr2 (134-172)||(1631850-1631888)
chr2 (246-313)||(11098727-11098796)
chr2 (405-491)||(26352269-26352352)
chr2 (134-172)||(36318127-36318165)
chr2 (267-350)||(42269613-42269697)
chr2 (120-174)||(17450601-17450657)
chr2 (242-318)||(41586352-41586429)
chr2 (134-170)||(33162568-33162604)
[»] chr7 (49 HSPs)
chr7 (12-378)||(5817015-5817379)
chr7 (1-352)||(20284066-20284416)
chr7 (83-328)||(3047313-3047559)
chr7 (1-352)||(23402783-23403133)
chr7 (12-328)||(2580378-2580694)
chr7 (1-328)||(2647489-2647816)
chr7 (12-328)||(9189798-9190117)
chr7 (1-328)||(33332242-33332570)
chr7 (19-328)||(9184966-9185267)
chr7 (12-350)||(29159791-29160133)
chr7 (1-328)||(46516097-46516430)
chr7 (6-174)||(28617172-28617340)
chr7 (12-328)||(4796461-4796776)
chr7 (152-304)||(9235398-9235551)
chr7 (12-282)||(35960804-35961076)
chr7 (224-328)||(47263867-47263971)
chr7 (12-261)||(55936-56187)
chr7 (224-328)||(2479537-2479641)
chr7 (225-328)||(21989110-21989213)
chr7 (230-328)||(44847917-44848015)
chr7 (1-282)||(49091638-49091922)
chr7 (226-328)||(18413843-18413947)
chr7 (226-328)||(21640013-21640117)
chr7 (226-328)||(21646211-21646315)
chr7 (226-328)||(18408967-18409071)
chr7 (225-281)||(21983488-21983544)
chr7 (226-313)||(1533244-1533334)
chr7 (1-113)||(44848693-44848805)
chr7 (142-208)||(45685658-45685725)
chr7 (122-178)||(761271-761328)
chr7 (1-167)||(2479313-2479479)
chr7 (122-170)||(38671326-38671376)
chr7 (122-172)||(41649115-41649166)
chr7 (246-313)||(2058196-2058265)
chr7 (134-172)||(2390294-2390332)
chr7 (138-172)||(4538662-4538696)
chr7 (172-213)||(27984632-27984673)
chr7 (134-170)||(2361090-2361126)
chr7 (134-170)||(6431985-6432021)
chr7 (12-91)||(21988896-21988972)
chr7 (134-170)||(22269987-22270023)
chr7 (134-170)||(26417330-26417366)
chr7 (134-170)||(29608751-29608787)
chr7 (1-45)||(30814587-30814631)
chr7 (134-170)||(31518809-31518845)
chr7 (134-170)||(31733087-31733123)
chr7 (299-351)||(48491453-48491504)
chr7 (134-170)||(48599452-48599488)
chr7 (252-328)||(49091918-49091994)
[»] chr5 (35 HSPs)
chr5 (1-328)||(28832236-28832562)
chr5 (83-328)||(11181624-11181871)
chr5 (75-324)||(7160700-7160950)
chr5 (2-377)||(10281728-10282105)
chr5 (12-328)||(31300387-31300705)
chr5 (1-357)||(17003724-17004080)
chr5 (1-328)||(19588723-19589050)
chr5 (61-374)||(33030687-33031001)
chr5 (12-328)||(11916764-11917081)
chr5 (152-328)||(24553319-24553496)
chr5 (11-252)||(2630218-2630460)
chr5 (1-261)||(42127269-42127530)
chr5 (1-328)||(14520205-14520535)
chr5 (12-208)||(6741839-6742036)
chr5 (1-328)||(12083969-12084297)
chr5 (224-328)||(9353124-9353228)
chr5 (224-318)||(15464735-15464829)
chr5 (224-328)||(36932140-36932244)
chr5 (224-328)||(42127162-42127266)
chr5 (226-328)||(38219603-38219707)
chr5 (217-328)||(35387858-35387971)
chr5 (16-333)||(3880291-3880612)
chr5 (122-172)||(33831692-33831744)
chr5 (226-313)||(24136053-24136143)
chr5 (134-170)||(27637731-27637767)
chr5 (122-170)||(8566050-8566100)
chr5 (142-179)||(3651617-3651655)
chr5 (134-172)||(16452092-16452130)
chr5 (100-268)||(30899942-30900111)
chr5 (134-170)||(213479-213515)
chr5 (134-170)||(3075776-3075812)
chr5 (28-92)||(4410238-4410301)
chr5 (138-170)||(28750777-28750809)
chr5 (134-174)||(30802839-30802878)
chr5 (134-170)||(38747019-38747055)
[»] chr6 (36 HSPs)
chr6 (12-328)||(31979501-31979817)
chr6 (12-328)||(31936575-31936880)
chr6 (12-325)||(5572038-5572350)
chr6 (29-333)||(14521679-14521986)
chr6 (1-318)||(22963677-22963994)
chr6 (1-318)||(23824399-23824716)
chr6 (1-328)||(31086266-31086593)
chr6 (2-333)||(31076723-31077060)
chr6 (1-262)||(10077026-10077285)
chr6 (151-328)||(24435764-24435940)
chr6 (1-328)||(5757270-5757599)
chr6 (60-350)||(21801113-21801406)
chr6 (217-328)||(22709204-22709315)
chr6 (12-278)||(18232833-18233101)
chr6 (1-281)||(4629930-4630211)
chr6 (226-318)||(5017298-5017390)
chr6 (67-208)||(1115017-1115159)
chr6 (100-251)||(30517998-30518150)
chr6 (1-103)||(21356012-21356114)
chr6 (224-304)||(21356238-21356318)
chr6 (226-313)||(5674570-5674660)
chr6 (122-211)||(99253-99342)
chr6 (227-310)||(5385799-5385881)
chr6 (108-213)||(33721466-33721573)
chr6 (267-328)||(21272781-21272842)
chr6 (122-172)||(22424931-22424983)
chr6 (134-170)||(2973057-2973093)
chr6 (122-170)||(28137512-28137562)
chr6 (290-328)||(10076983-10077021)
chr6 (1-45)||(5017545-5017589)
chr6 (134-170)||(5043641-5043677)
chr6 (122-170)||(16569047-16569098)
chr6 (134-170)||(17758037-17758073)
chr6 (134-170)||(17763004-17763040)
chr6 (134-170)||(21588945-21588981)
chr6 (134-170)||(21593678-21593714)
[»] chr3 (68 HSPs)
chr3 (1-328)||(21711200-21711527)
chr3 (12-328)||(3328138-3328455)
chr3 (1-352)||(1736063-1736415)
chr3 (1-328)||(8370270-8370598)
chr3 (12-328)||(1417272-1417589)
chr3 (12-377)||(25795768-25796133)
chr3 (1-278)||(18552716-18552993)
chr3 (12-328)||(26298976-26299293)
chr3 (12-328)||(40592563-40592881)
chr3 (1-328)||(36029070-36029398)
chr3 (83-328)||(3323472-3323719)
chr3 (12-328)||(47923685-47924005)
chr3 (12-328)||(48438202-48438520)
chr3 (1-328)||(6794496-6794823)
chr3 (142-328)||(24694947-24695133)
chr3 (12-350)||(3715760-3716101)
chr3 (240-387)||(4386702-4386846)
chr3 (149-318)||(35925605-35925773)
chr3 (1-195)||(4386843-4387038)
chr3 (122-310)||(8126727-8126917)
chr3 (1-328)||(16264325-16264654)
chr3 (12-328)||(37466279-37466600)
chr3 (61-333)||(21353598-21353877)
chr3 (1-328)||(27974733-27975063)
chr3 (16-328)||(40844644-40844960)
chr3 (224-328)||(27986237-27986341)
chr3 (224-328)||(39032336-39032439)
chr3 (142-328)||(25929177-25929365)
chr3 (224-318)||(33386466-33386560)
chr3 (16-213)||(29100151-29100350)
chr3 (224-328)||(37725876-37725980)
chr3 (143-333)||(47649688-47649882)
chr3 (224-314)||(26928394-26928484)
chr3 (1-287)||(30709611-30709902)
chr3 (224-328)||(27453161-27453263)
chr3 (224-328)||(32143524-32143628)
chr3 (226-328)||(1306153-1306257)
chr3 (112-201)||(25517069-25517159)
chr3 (242-328)||(27026925-27027011)
chr3 (252-316)||(23392106-23392170)
chr3 (85-213)||(5366221-5366351)
chr3 (242-328)||(27038270-27038356)
chr3 (122-170)||(22835106-22835156)
chr3 (255-318)||(23410529-23410592)
chr3 (122-169)||(9581297-9581346)
chr3 (134-170)||(26386599-26386635)
chr3 (134-170)||(46860488-46860524)
chr3 (122-170)||(760861-760911)
chr3 (461-528)||(28074099-28074166)
chr3 (122-170)||(29682373-29682423)
chr3 (122-170)||(39153465-39153515)
chr3 (337-391)||(2075349-2075403)
chr3 (246-313)||(2671386-2671455)
chr3 (246-313)||(8477592-8477661)
chr3 (246-313)||(9091101-9091170)
chr3 (246-313)||(40372596-40372665)
chr3 (134-172)||(53921621-53921659)
chr3 (246-312)||(8738864-8738932)
chr3 (100-179)||(41163177-41163258)
chr3 (299-351)||(5373097-5373148)
chr3 (28-92)||(22764325-22764389)
chr3 (134-170)||(30236139-30236175)
chr3 (122-171)||(32744540-32744590)
chr3 (134-170)||(34491226-34491262)
chr3 (134-170)||(40734512-40734548)
chr3 (134-170)||(40735397-40735433)
chr3 (134-170)||(43401920-43401956)
chr3 (134-170)||(43403863-43403899)
[»] chr1 (50 HSPs)
chr1 (3-328)||(47098617-47098942)
chr1 (12-328)||(32889427-32889743)
chr1 (1-377)||(47703679-47704056)
chr1 (1-328)||(29651788-29652118)
chr1 (1-350)||(19072904-19073256)
chr1 (1-350)||(19120794-19121146)
chr1 (1-328)||(13598375-13598705)
chr1 (122-377)||(40816560-40816814)
chr1 (3-328)||(47102631-47102959)
chr1 (83-328)||(22819487-22819736)
chr1 (1-328)||(9476238-9476567)
chr1 (12-282)||(16124352-16124625)
chr1 (95-208)||(32736909-32737023)
chr1 (34-324)||(3281718-3282008)
chr1 (1-316)||(26644702-26645019)
chr1 (224-357)||(13604387-13604518)
chr1 (224-328)||(27104194-27104297)
chr1 (122-213)||(35109445-35109537)
chr1 (224-328)||(37069968-37070072)
chr1 (226-328)||(19358632-19358735)
chr1 (1-328)||(21536362-21536691)
chr1 (226-328)||(19361221-19361324)
chr1 (226-328)||(24202557-24202661)
chr1 (168-311)||(9022715-9022857)
chr1 (226-328)||(19366096-19366200)
chr1 (122-208)||(17345432-17345519)
chr1 (12-103)||(27104391-27104481)
chr1 (71-175)||(9023785-9023890)
chr1 (16-208)||(10996952-10997140)
chr1 (226-273)||(19379917-19379964)
chr1 (1-103)||(775649-775750)
chr1 (100-173)||(11032268-11032342)
chr1 (485-546)||(8871522-8871583)
chr1 (122-170)||(8550891-8550941)
chr1 (122-258)||(918342-918480)
chr1 (122-171)||(34603589-34603640)
chr1 (134-170)||(41360928-41360964)
chr1 (122-170)||(37168311-37168361)
chr1 (122-169)||(7482335-7482384)
chr1 (134-172)||(19754507-19754545)
chr1 (134-172)||(47255458-47255496)
chr1 (134-172)||(50169328-50169366)
chr1 (122-172)||(40122302-40122354)
chr1 (134-170)||(193625-193661)
chr1 (134-170)||(4552755-4552791)
chr1 (299-351)||(10925097-10925148)
chr1 (134-170)||(13547207-13547243)
chr1 (134-170)||(13549118-13549154)
chr1 (134-170)||(29136261-29136297)
chr1 (134-170)||(37033191-37033227)
[»] chr4 (53 HSPs)
chr4 (11-351)||(5112225-5112564)
chr4 (12-328)||(16623085-16623402)
chr4 (1-328)||(10047356-10047686)
chr4 (37-328)||(39774097-39774389)
chr4 (1-377)||(24333786-24334164)
chr4 (1-324)||(38152234-38152559)
chr4 (1-328)||(3777526-3777854)
chr4 (11-328)||(1983092-1983409)
chr4 (1-328)||(36315022-36315349)
chr4 (1-328)||(36329231-36329558)
chr4 (11-309)||(18377347-18377645)
chr4 (1-328)||(5268992-5269311)
chr4 (122-328)||(42599367-42599573)
chr4 (12-328)||(6743207-6743523)
chr4 (122-328)||(25861825-25862033)
chr4 (16-282)||(37781854-37782123)
chr4 (191-328)||(16628664-16628801)
chr4 (1-328)||(5396463-5396793)
chr4 (1-328)||(54867161-54867484)
chr4 (224-328)||(8689288-8689392)
chr4 (225-326)||(5143462-5143563)
chr4 (252-387)||(6542378-6542510)
chr4 (224-387)||(3793814-3793976)
chr4 (108-213)||(34670573-34670679)
chr4 (224-328)||(31985425-31985529)
chr4 (225-326)||(5147880-5147981)
chr4 (226-328)||(28468326-28468430)
chr4 (252-378)||(51336912-51337035)
chr4 (1-103)||(39245971-39246072)
chr4 (76-210)||(18912274-18912409)
chr4 (73-198)||(4956227-4956358)
chr4 (134-172)||(5871832-5871870)
chr4 (122-207)||(39593825-39593910)
chr4 (12-81)||(48053071-48053140)
chr4 (134-170)||(379394-379430)
chr4 (134-170)||(12073406-12073442)
chr4 (122-208)||(36175205-36175290)
chr4 (134-170)||(52467472-52467508)
chr4 (252-318)||(4587862-4587929)
chr4 (12-103)||(16630699-16630789)
chr4 (122-170)||(41964429-41964479)
chr4 (1-103)||(5143236-5143337)
chr4 (134-172)||(21688261-21688299)
chr4 (246-313)||(24742168-24742237)
chr4 (134-172)||(24969124-24969162)
chr4 (137-171)||(35662454-35662488)
chr4 (142-171)||(5349923-5349952)
chr4 (133-170)||(13009548-13009585)
chr4 (299-351)||(12739793-12739844)
chr4 (299-351)||(12747999-12748050)
chr4 (246-313)||(29760868-29760938)
chr4 (134-170)||(47038528-47038564)
chr4 (252-333)||(48893839-48893922)
[»] chr8 (45 HSPs)
chr8 (1-208)||(9054750-9054957)
chr8 (12-328)||(19752186-19752503)
chr8 (61-318)||(3051156-3051415)
chr8 (83-317)||(7492976-7493212)
chr8 (89-351)||(5990333-5990594)
chr8 (1-328)||(23799368-23799697)
chr8 (12-333)||(26403013-26403339)
chr8 (12-328)||(5702272-5702592)
chr8 (143-328)||(4696400-4696585)
chr8 (4-328)||(28307541-28307867)
chr8 (224-377)||(9054166-9054316)
chr8 (12-318)||(6127208-6127520)
chr8 (1-328)||(7412316-7412645)
chr8 (224-328)||(4456229-4456333)
chr8 (224-328)||(19175546-19175650)
chr8 (1-184)||(6813659-6813844)
chr8 (153-391)||(13204524-13204751)
chr8 (226-328)||(1261742-1261846)
chr8 (16-184)||(8863563-8863730)
chr8 (226-310)||(31071035-31071121)
chr8 (1-92)||(9765849-9765940)
chr8 (226-314)||(26288095-26288185)
chr8 (226-314)||(26301352-26301442)
chr8 (226-314)||(26313346-26313436)
chr8 (108-213)||(31513240-31513340)
chr8 (100-208)||(34477135-34477241)
chr8 (252-351)||(4731532-4731629)
chr8 (246-313)||(33037608-33037677)
chr8 (12-101)||(4696617-4696705)
chr8 (246-313)||(4759874-4759944)
chr8 (134-170)||(19491817-19491853)
chr8 (134-170)||(40328793-40328829)
chr8 (461-528)||(40320784-40320851)
chr8 (252-374)||(9765600-9765720)
chr8 (246-313)||(10688940-10689009)
chr8 (67-179)||(33503783-33503897)
chr8 (134-172)||(42435109-42435147)
chr8 (134-170)||(1292581-1292617)
chr8 (134-170)||(3303788-3303824)
chr8 (134-170)||(9765759-9765795)
chr8 (134-170)||(10929813-10929849)
chr8 (134-170)||(27811292-27811328)
chr8 (134-170)||(30143354-30143390)
chr8 (246-313)||(36979605-36979673)
chr8 (134-170)||(40221759-40221795)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-328)||(5660-5990)
scaffold0006 (1-323)||(2469-2794)
scaffold0006 (224-357)||(133044-133175)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-328)||(43753-44082)
scaffold0087 (224-328)||(36624-36728)
[»] scaffold0036 (1 HSPs)
scaffold0036 (12-328)||(85671-85988)
[»] scaffold0148 (1 HSPs)
scaffold0148 (12-377)||(10717-11084)
[»] scaffold0140 (1 HSPs)
scaffold0140 (227-328)||(8209-8310)
[»] scaffold0078 (1 HSPs)
scaffold0078 (129-351)||(23636-23859)
[»] scaffold0098 (1 HSPs)
scaffold0098 (224-328)||(45399-45504)
[»] scaffold0002 (1 HSPs)
scaffold0002 (100-282)||(14757-14942)
[»] scaffold0188 (2 HSPs)
scaffold0188 (226-328)||(17740-17844)
scaffold0188 (226-328)||(23833-23937)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-326)||(17240-17554)
[»] scaffold0016 (2 HSPs)
scaffold0016 (100-213)||(102402-102516)
scaffold0016 (299-351)||(114464-114515)
[»] scaffold0477 (1 HSPs)
scaffold0477 (285-333)||(5743-5791)
[»] scaffold0014 (1 HSPs)
scaffold0014 (134-170)||(80401-80437)


Alignment Details
Target: chr2 (Bit Score: 506; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 1 - 644
Target Start/End: Original strand, 35397488 - 35398129
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35397488 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaagatgaaa 35397587  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacctaatttctacccatttttcaagtcacccacaatctcaatgaatccta 200  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35397588 gtgatataaagaggttacgaaaa-ttagcttaaaaggtcataaagaacaaacctaatttctatccatttttcaagtcacccacaatctcaatgaatccta 35397686  T
Q  201 agagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaa 300  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||| ||    
T  35397687 agagaaaatacaatttgaagttattgatccttccaatggtgaaatctcactacccaaggtaattacaatgttttccaacccagaagaacctcactacaaa 35397786  T
Q  301 gacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaataaaaccttatatattgacctgg 400  Q
    |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  35397787 gacaatcaaccctaaagtgacctcctttgtatttttcaagtt--tctctctctaaaccacacacaaaacatgaagaataaaaccttatatagtgacctgg 35397884  T
Q  401 cgctgaggcatcatgccacgttgccacctatcgtgccactaaggagttggtacgtaacaatacaatacttgaacttatctcctgcatcgtgttatgttgc 500  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  35397885 cagcgaggcatcatgccacgttgccacctatcgtgccactaaggagttggtacgtaagaatacaatacttgaacttatctcctgcatcgtgctatgttgc 35397984  T
Q  501 ctctgcattgtgccacgatttttccagttacaacctcccagaaacatccaaaatcgtaccgcgattttttcaatacttcaatcatc-aaattttgagtca 599  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| | || |||||||| |||||||||||||||| ||||||| |||||    
T  35397985 ctctgcatcatgccacgatttttccagttacaacctcccagaagcatccaaaatcttgccacgatttttccaatacttcaatcatcaaaatttttagtca 35398084  T
Q  600 attttcaacacaaatatttatgcgatcaacaaatccagctagaat 644  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  35398085 attttcaacacaaatatttatgctatcaacaaatccagctagaat 35398129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 12 - 391
Target Start/End: Complemental strand, 2869802 - 2869424
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||| ||| | ||||| || |||||| ||||||||||| |||||||||||| ||||    
T  2869802 aacaaacacaccaatattgtttacccagttcggtccaatatgacctac-tctaggggagagagtagctctccaatccactaagatgaaagtgatacaaag 2869704  T
Q  112 aggttatgaaaaattagcttaaaagctcataaagaacaaa--cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
      ||||  | ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  2869703 gagttacaagaaattagcttaaaagctcacaaagaacaaaaacctaatttctacccatttttcaagtcacccacactctcaatgaatcctaagagaaaac 2869604  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    ||||   |||| || ||||| |||||||||| ||||||||||||||||| ||| ||| ||||||| ||||| ||  |||| |||||||| ||||||||||    
T  2869603 actaacggaagctttttgattcttccaatggcgaaatctcactacccaatgtgtttacaatgttttccaactcaagagaacctcactacaaagacactca 2869504  T
Q  309 accctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaataaaaccttatata 391  Q
    ||| |||||| | ||||||| || ||||||||||  ||| ||| ||||||||||| || ||||||||||| ||||||| ||||    
T  2869503 accgtaaagttatctcctttgta-ttttcaagtt--tctttctttaagccacacataacacatgaagaatgaaaccttgtata 2869424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 14699127 - 14698801
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  14699127 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaa 14699029  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    | | || |||   ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| |||||||||||||    
T  14699028 g-gttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcc 14698932  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |   |||| || |||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||   |||  ||||||||    
T  14698931 taagagaaaacacaaaaggaagctttttgatccttccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaacccgagagatcctcactac 14698832  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     |||||||||||||||||||| |||||||||    
T  14698831 aaagacactcaaccctaaagttacctccttt 14698801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 12 - 350
Target Start/End: Original strand, 31056031 - 31056371
Alignment:
Q  12 aacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    ||||||||||||||  |||||| ||| ||||||||||||| | ||||| |||| | ||||| ||||||||| ||||||||||| ||||||||| || |||    
T  31056031 aacaaacacaccaaagattgttgacctagttcggttcaatatgaccta-atctaggggagagagcagctctccaatccactaagatgaaagtgttacaaa 31056129  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
       ||||  | ||||||||||| ||||| | ||| |||||| ||||||||||||||||||||    |||||||||| |||||||||||||||||||||||    
T  31056130 agagttacaataaattagcttataagcttacaaaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcctaagagaaaa 31056227  T
Q  209 tactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagacac 305  Q
     || |   |||| || ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||  ||  |||| |||||||| |||||||    
T  31056228 cacaaaaggaagctttttgatcctttcaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacac 31056327  T
Q  306 tcaaccctaaagtgacctcctttttatttttcaagtttctctctc 350  Q
    |||||||| |||| ||||||||| || ||  ||||||||||||||    
T  31056328 tcaaccctcaagttacctcctttgta-ttcccaagtttctctctc 31056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 27 - 333
Target Start/End: Complemental strand, 2838124 - 2837814
Alignment:
Q  27 attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaatt 126  Q
    |||||| |||||||||||| |||| | |||||| ||||| ||||| ||||  ||| ||||||||||| |||||||||||| |||   ||||  | |||||    
T  2838124 attgttgacccagttcggtccaatatgacctac-tctgggggagagagcacatctccaatccactaaaatgaaagtgatacaaatgagttacaagaaatt 2838026  T
Q  127 agcttaaaagctcataaagaaca-aacctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttat 224  Q
    ||   || |||||| |||||||| |||||||||| | ||||||||||| |||||||||  ||||||||||||||||||||||| ||||   |||  || |    
T  2838025 agtacaagagctcacaaagaacacaacctaatttttgcccatttttcatgtcacccaccttctcaatgaatcctaagagaaaacactaaaggaatatttt 2837926  T
Q  225 tgatccttccaatggtgaaat-ctcactacccaaggtgattataatgtttcccaacccagaaga--atctcactacgaagacactcaaccctaaagtgac 321  Q
    | ||||||||||||||||||| ||||||| |||||||| ||| |||||||||||||||  ||||  | |||||||| |||||||||||||||||||| ||    
T  2837925 ttatccttccaatggtgaaattctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 2837826  T
Q  322 ctcctttttatt 333  Q
    ||||||| ||||    
T  2837825 ctcctttgtatt 2837814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 21629921 - 21630250
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| ||||||||| || |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||    
T  21629921 tgaaagaaaggaacaaacacaccaagattgttgacccagttcagtccaatatgaccta-atctgg-ggagagagcagctctccaatccactatgatgaaa 21630018  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||   ||||  | ||||||| ||| ||||| | | |||||||| || |||||||||||||||||    |||||||||| |||||||   |||    
T  21630019 gtgttacaaaagagttacaagaaattagtttataagcttacacaagaacaagacttaatttctacccattttgt--gtcacccacactctcaataatgaa 21630116  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||    
T  21630117 tcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcac 21630216  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| |||||||||||| ||||||| |||||||||    
T  21630217 tacaaagacactcaacactaaagttacctccttt 21630250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 13569305 - 13569624
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | || ||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||    
T  13569305 tgaaagaaaggaataaacacaccaaaattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatgaaa 13569403  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaat 196  Q
    ||| || |||   ||||  | ||||||||||| ||| | | | |||||||| ||||||||||||||| || ||   |||||||||  || ||||  ||||    
T  13569404 gtgttacaaaagagttacaagaaattagcttataagtttacacaagaacaagacctaatttctaccctttgttt--gtcacccactctcacaatatgaat 13569501  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    |||||||||||| || |   |||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||  ||||||    
T  13569502 cctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttataatgtttcccaacccaagagatcctcact 13569601  T
Q  296 acgaagacactcaaccctaaagt 318  Q
    || |||||||| |||||||||||    
T  13569602 acaaagacacttaaccctaaagt 13569624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 33118113 - 33118440
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| ||||||  | ||||||||| |||| | ||||| || ||| ||||| |||||| || ||||||||||  ||||||    
T  33118113 tgaaagaaaggaacaaacacaccaagattgttggctcagttcggtccaatatgaccta-atttgggggagagagcagccctccaatccactatgatgaaa 33118211  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    | | || |||   ||||  | ||||||||||| ||||| | | |||||||| || |||||||||||||||||    ||||||| || ||||||||||||     
T  33118212 gagttacaaaatagttacaagaaattagcttataagcttacacaagaacaagacttaatttctacccattttgt--gtcaccctcactctcaatgaatct 33118309  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |   |||| || |||||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||  |||  ||||||||    
T  33118310 taagagaaaacacaaaaggaagctttttgatccttccaatggcgaaatctcactacccaaggtgtttacaatgttccccaacccaagagatcctcactac 33118409  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     |||||||||||||||||||| |||||||||    
T  33118410 aaagacactcaaccctaaagttacctccttt 33118440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 33528741 - 33528416
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| || |||   ||| |||| | || ||||||||||  ||||||    
T  33528741 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atatgggaaagagagcaaccctccaatccactatgatgaaa 33528643  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaat 196  Q
    ||| || |||   ||||  | ||||||||||| |||||    |||||||| ||||||||||||||||||||    |||||||| | |||||||   ||||    
T  33528642 gtgttacaaaagagttacaagaaattagcttataagct----aagaacaagacctaatttctacccattttgt--gtcacccaaactctcaataatgaat 33528549  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    |||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||  |||  ||||||    
T  33528548 cctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctcact 33528449  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||||||||||||||||| |||||||||    
T  33528448 acaaagacactcaaccctaaagttacctccttt 33528416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 357
Target Start/End: Original strand, 20522197 - 20522554
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||| | || ||||||||||  ||||||    
T  20522197 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcaaccctccaatccactatgatgaaa 20522295  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||  |||||  | ||||||| ||| ||||| | ||| |||||| || |||||||||||||||||    |||||||||| |||||||   ||     
T  20522296 gtgttacaaaagggttacaagaaattagattataagcttacaaaagaacaagacttaatttctacccattttgt--gtcacccacactctcaataatgag 20522393  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    |||||||| |||| || |   |||| || |||||| ||| |||||||||||||||||||||||| || ||| |||| |||||||||||  |||  |||||    
T  20522394 tcctaagaaaaaacacaaaaggaagctttttgatcattcaaatggtgaaatctcactacccaagttgtttacaatgcttcccaacccaagagatactcac 20522493  T
Q  295 tacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagc 357  Q
    ||| |||||||||||||||||||| ||||||||| || | |  ||||||||||||||| ||||    
T  20522494 tacaaagacactcaaccctaaagttacctcctttgtaatct--aagtttctctctctccaagc 20522554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 12 - 327
Target Start/End: Original strand, 39482919 - 39483237
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||| |||||||| |||| | ||||| || ||| ||||| |||||  || ||||||||||  |||||| || || |||     
T  39482919 aacaaacacaccaagattgttgacctagttcggtccaatatgaccta-atatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaa 39483017  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctc---aatgaatcctaagagaa 206  Q
      ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||  | |||||||||| ||||   |||||||||||||||||    
T  39483018 gagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--atgtcacccacactctcaataatgaatcctaagagaa 39483115  T
Q  207 aatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacac 305  Q
    || || |   |||| || |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||  |||  ||||| || |||||||    
T  39483116 aacacaaaaggaagttttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagagatcctcacaacaaagacac 39483215  T
Q  306 tcaaccctaaagtgacctcctt 327  Q
    ||||||||||||| | ||||||    
T  39483216 tcaaccctaaagttatctcctt 39483237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 83 - 328
Target Start/End: Original strand, 40014983 - 40015229
Alignment:
Q  83 caatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacc 180  Q
    ||||||||||| |||||||||||| |||   |||  || |||||||||||||| |||| ||| |||||| ||||||||||||| |||||| || ||||||    
T  40014983 caatccactaagatgaaagtgatacaaatgagttgcgagaaattagcttaaaaactcacaaaagaacaagacctaatttctactcatttt-catgtcacc 40015081  T
Q  181 cacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaac 279  Q
    |||| ||||||| |||||||||| |||  || |   |||| || ||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  40015082 cacactctcaataaatcctaagaaaaatcacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaatgtgtttacaatgtttcccaac 40015181  T
Q  280 ccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||  |||| |||| ||| || ||||||||||||||||| |||||||||    
T  40015182 ccaagagaacctcaatac-aaaacactcaaccctaaagttacctccttt 40015229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 2 - 328
Target Start/End: Original strand, 34388836 - 34389156
Alignment:
Q  2 gaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaag 101  Q
    ||||||| | |||||||||||| | |||||| ||||| |||||| |||| | ||||| |||||| ||||| || |||||| ||||||||||  |||||||    
T  34388836 gaaagaaaggaacaaacacaccgagattgttgacccaattcggtccaatatgaccta-atctgggggagagagtagctctccaatccactatgatgaaag 34388934  T
Q  102 tgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcc 198  Q
    || || |||   ||||  | ||||||||||| |        |||||||| ||||||||||||||||||||    |||||||||  || ||||  ||||||    
T  34388935 tgttacaaaagagttacaagaaattagcttacac-------aagaacaagacctaatttctacccattttgt--gtcacccactctcacaatatgaatcc 34389025  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  ||||||||    
T  34389026 taagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactac 34389125  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     ||||||| |||||||||||| |||||||||    
T  34389126 aaagacacacaaccctaaagttacctccttt 34389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 83 - 312
Target Start/End: Complemental strand, 15903928 - 15903698
Alignment:
Q  83 caatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaac-ctaatttctacccatttttcaagtcaccc 181  Q
    ||||||||||| || ||||||||| |||| |||||  | |||| |||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  15903928 caatccactaagataaaagtgatacaaaggggttacaagaaat-agcttacaagctcacaaagaacaaattctaatttctacccatttttcaagtcaccc 15903830  T
Q  182 acaatctcaatgaatcctaagagaaaatactatttgaa-gttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc 280  Q
    ||| ||||||||||||||| ||||||| || |    ||  || || ||| ||||||||||||||||||| || |||| ||| ||| ||||||||| ||||    
T  15903829 acactctcaatgaatcctatgagaaaacacaaaagaaatcttttttatcattccaatggtgaaatctcattatccaatgtgtttacaatgtttcctaacc 15903730  T
Q  281 cagaagaatctcactacgaagacactcaaccc 312  Q
    ||  |||| |||||||| |||||| |||||||    
T  15903729 caagagaacctcactacaaagacattcaaccc 15903698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 224 - 348
Target Start/End: Complemental strand, 36757658 - 36757536
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||| ||||    
T  36757658 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 36757559  T
Q  324 cctttttatttttcaagtttctctc 348  Q
    ||||| ||   ||||||||||||||    
T  36757558 cctttgta--attcaagtttctctc 36757536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 17865180 - 17865510
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | ||||| |||||||| |||||| ||||||||| ||  ||| | ||||| |||||| ||||| |||| | || ||||||||||  ||||||    
T  17865180 tgaaagaaaggaacaatcacaccaagattgttgacccagttcagtcgaatatgaccta-atctgggggagagagcaaccctccaatccactatgatgaaa 17865278  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||   ||||  | ||||||||||| ||||| | | |||||||| || ||||||||||| |||||  | |||| ||||| |||||||   |||    
T  17865279 gtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacataatttctacctatttt--atgtcatccacactctcaataatgaa 17865376  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||| || |||||||||| | | ||||||||||||||||||||||| ||| ||||||||||||||||  |||   ||||    
T  17865377 tcctaagagaaaacacaaaaggaagctttttgatccttctatttgtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcttcac 17865476  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| |||||||||||||||||||| |||||||||    
T  17865477 tacaaagacactcaaccctaaagttacctccttt 17865510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 12 - 368
Target Start/End: Complemental strand, 34682443 - 34682086
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | || || |||||| ||||| ||||||||| ||||||||||  ||||||||| || |||     
T  34682443 aacaaacacaccaagattgttgacccagttcggtccaatatgacata-atctgggggagagagcagctctccaatccactataatgaaagtgttacaaaa 34682345  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaa--tgaatcctaagagaaa 207  Q
      ||||  | ||||||||||| | ||| | | |||||||| || |||||||||||||||||    |||||||||  || |||  ||||||||||||||||    
T  34682344 gagttacaagaaattagcttacaggcttacacaagaacaagacttaatttctacccattttgt--gtcacccactctcacaaggtgaatcctaagagaaa 34682247  T
Q  208 atactatttgaagt-tattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaa--cccagaagaatctcactacgaagaca 304  Q
    | || |   |||   | |||||||||| | ||||||||||||||||||||||||| ||| ||||||| ||||  | ||  |||| |||||||| ||||||    
T  34682246 acacaaaaggaaacattttgatccttcaagtggtgaaatctcactacccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagaca 34682147  T
Q  305 ctcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaa 368  Q
    |||||||||||||| ||||||||| || ||  ||||||  |||||||| |||||||||||||||    
T  34682146 ctcaaccctaaagttacctcctttgta-ttcccaagtt--tctctctcaaagccacacacaaaa 34682086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 27 - 350
Target Start/End: Original strand, 8040063 - 8040392
Alignment:
Q  27 attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa-gag-gttatgaaaaa 124  Q
    |||||| ||||||||| || |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||||| || ||| ||| ||||  | |||    
T  8040063 attgttgacccagttcagtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaa 8040161  T
Q  125 ttagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaaatactatttg-aa 219  Q
    |||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||  || ||||  ||||||||||||||||   ||   | ||    
T  8040162 ttagcttacaagcttacacaagaacaagacctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaagagaaaaacataaaaggaa 8040259  T
Q  220 g-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaaga--atctcactacgaagacactcaaccctaaa 316  Q
    | || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||  |  ||||||| ||||||||||||| ||||    
T  8040260 gctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacttcactacaaagacactcaaccataaa 8040359  T
Q  317 gtgacctcctttttatttttcaagtttctctctc 350  Q
    || ||||||||| || ||  ||||||||||||||    
T  8040360 gttacctcctttgta-ttaccaagtttctctctc 8040392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 10445363 - 10445259
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||   |||| |||||||| |||||| ||||||||||||| ||||    
T  10445363 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccgagagaacctcactacaaagacattcaaccctaaagttacct 10445264  T
Q  324 ccttt 328  Q
    |||||    
T  10445263 ccttt 10445259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 8390259 - 8389941
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||  | ||||| || ||| ||||| ||||||||| ||||||||||  ||||||||| || |||     
T  8390259 aacaaacacaccaaaattgttgacccagttcggtccaaaatgaccta-atttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaa 8390161  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaa 207  Q
      ||||  | ||||||||||| |||||   | |||||||| ||||||||||||||||||||    |||||||||  || ||||  |||||||||||||||    
T  8390160 gagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaagagaaa 8390063  T
Q  208 atactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacact 306  Q
    | || |   |||| || ||||| ||||||||||| ||||||||||| |||||||| ||| ||||||||| ||||||  |||   ||||||| ||||| ||    
T  8390062 acacaagaggaagctttttgattcttccaatggtaaaatctcactatccaaggtgtttacaatgtttcctaacccaagagatcatcactacaaagaccct 8389963  T
Q  307 caaccctaaagtgacctccttt 328  Q
    |||||||||||| | |||||||    
T  8389962 caaccctaaagttatctccttt 8389941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 28259073 - 28258969
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||  |||  |||||||  |||||||||||||||||||| ||||    
T  28259073 ttgatccttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttacct 28258974  T
Q  324 ccttt 328  Q
    |||||    
T  28258973 ccttt 28258969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 328
Target Start/End: Complemental strand, 10707358 - 10707044
Alignment:
Q  15 aaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagagg 114  Q
    ||||||||| | |||||| |||||||||||| |||| | ||||| || ||| ||||| | || |||| ||||||||||  ||||||||| || |||   |    
T  10707358 aaacacaccgagattgttgacccagttcggtccaatatgaccta-atatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagag 10707260  T
Q  115 ttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaaata 210  Q
    |||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||| | |   |||||||||  || ||||  |||||||||||||||| |    
T  10707259 ttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatctgt---gtcacccactctcacaatatgaatcctaagagaaaaca 10707163  T
Q  211 ctatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaa 309  Q
    | |   |||| || |||||||||| ||||||||||||| ||||||||||||| ||| |||||||| |||||||  |||  |||||||| |||| | | ||    
T  10707162 caaaaggaagctttttgatccttctaatggtgaaatctaactacccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagataataaa 10707063  T
Q  310 ccctaaagtgacctccttt 328  Q
    ||||||||| |||||||||    
T  10707062 ccctaaagttacctccttt 10707044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 23078367 - 23078263
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||  ||| |||||  || |||||||||||||| ||||| ||||    
T  23078367 ttgatccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagattctcatcacaaagacactcaacccaaaagttacct 23078268  T
Q  324 ccttt 328  Q
    |||||    
T  23078267 ccttt 23078263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 28770774 - 28770682
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaac-ctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatacta 213  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  |||| || |||||||||||||||||||| ||||    
T  28770774 aaattagcttaaaagctcacaaagaacaaactctaatttctacccatttttcaagtcatacacactcgcaatgaatcctaagagaaaacacta 28770682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 40739035 - 40739139
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||| |||  |||    
T  40739035 ttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 40739134  T
Q  324 ccttt 328  Q
    |||||    
T  40739135 ccttt 40739139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 27149349 - 27149207
Alignment:
Q  67 ggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctaccc 165  Q
    ||||| ||||||||| ||||||||||  |||||||||||| |||| ||| |  | |||||| |||||||||||| ||||||||| || ||| |||||||     
T  27149349 ggagagagcagctctccaatccactataatgaaagtgatacaaaggggtaacaagaaattaccttaaaagctcacaaagaacaagacttaacttctacct 27149250  T
Q  166 atttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
     ||||| |||||||||||| || ||||||||||||||||||||    
T  27149249 gttttttaagtcacccacactcacaatgaatcctaagagaaaa 27149207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 122 - 282
Target Start/End: Complemental strand, 18674401 - 18674238
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagtcacccacaatc-tcaatgaatcctaagagaaaatactatttgaa 219  Q
    ||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| || | |||||||| |||||||||| | ||   |||    
T  18674401 aaattagtttaaaagctcacaaagaacaaaccataatttctatccatttttcaagtcacccacactcataaatgaatcataagagaaaacattaaaggaa 18674302  T
Q  220 g-ttattgatccttccaatggtgaaatctcactacccaaggtgatta-taatgtttcccaaccca 282  Q
    | || ||||||||| ||||  |||||||||||| | ||||||| |||  ||||||||||||||||    
T  18674301 gctttttgatcctt-caataatgaaatctcactgctcaaggtgtttacgaatgtttcccaaccca 18674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 10445553 - 10445394
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| | |||||||||| |||| | ||||| |||||| ||||| ||||||||| |||||||||| |||||||||| || |||     
T  10445553 aacaaacacaccaagattgttgatccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactattatgaaagtgttacaaaa 10445455  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttt 170  Q
      ||||  | ||||||||||| || || | | |||||||| ||||||||||||||||||||    
T  10445454 gagttacaagaaattagcttacaatcttacacaagaacaagacctaatttctacccatttt 10445394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 1345654 - 1345449
Alignment:
Q  10 gaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccact-aatatgaaagtgata 106  Q
    |||||||||||||||| |  ||||| |||||||||||| |||| | |||||| ||||| ||||| |||| |||| | ||||||| || ||||||||||||    
T  1345654 gaaacaaacacaccaagaaattgttgacccagttcggtccaatatgacctac-tctgggggagagagcacctctccgatccacttaagatgaaagtgata 1345556  T
Q  107 taaagaggttatgaaaaattagcttaaaagctcataaagaaca-aacctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagaga 205  Q
     |||   |||   | ||||||||  |  |||||| ||| |||| |||||||||||||||||||||||| ||||||| || |||||||||||| ||| |||    
T  1345555 caaatgagttgcaagaaattagcacatgagctcacaaa-aacacaacctaatttctacccatttttcatgtcacccccactctcaatgaatcataaaaga 1345457  T
Q  206 aaatacta 213  Q
    ||| ||||    
T  1345456 aaacacta 1345449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 3491955 - 3492045
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaacccta 314  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||  ||| ||||||||  |||  |||||||| ||||||||||||||||    
T  3491955 gatccttccaatggtggaatctcactacccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaacccta 3492045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 1344435 - 1344331
Alignment:
Q  231 ttccaatggtgaaat-ctcactacccaaggtgattataatgtttcccaacc-cagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||||||| ||||||||| ||| || ||| |||||||||||||| ||  |||| |||||||| |||||||||||||||||| | ||||| |||    
T  1344435 ttccaatggtgaaattctcactaccgaagatgtttacaatgtttcccaacctcaagagaacctcactacaaagacactcaaccctaaaattacctcattt 1344336  T
Q  329 ttatt 333  Q
     ||||    
T  1344335 gtatt 1344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 25409842 - 25409924
Alignment:
Q  234 caatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaacccta 314  Q
    |||||||||||||||||||||||||||| ||| ||||  ||||||||||||  |||  ||| |||| ||||||||||||||||    
T  25409842 caatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaacccta 25409924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 9296292 - 9296202
Alignment:
Q  226 gatccttccaatggtgaaatc-tcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||  ||||||||||||  |||  ||  |||| |||||||||||||||    
T  9296292 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaatagacactttctacaaagacactcaaccct 9296202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 11690565 - 11690515
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  11690565 aaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttt 11690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 42362416 - 42362366
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  42362416 aaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttt 42362366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 723848 - 723900
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttttc 172  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||| |||||    
T  723848 aaattagcttaaacaagctcacaaagaacaaacctaatttctacccagttttc 723900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 41586549 - 41586464
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaacct-aatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    ||||||| |||||||| || ||||||||||| | |||||||||| |||||||||||||| |||  ||  |||| ||||||||||||||    
T  41586549 aaattagtttaaaagcacacaaagaacaaactttaatttctacctatttttcaagtcactcac--tcagaatggatcctaagagaaaa 41586464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 11151695 - 11151745
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||||| ||||||||||||||||||    
T  11151695 aaattagcttaaacaagctcacaaagaacaaatctaatttctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 14202509 - 14202559
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||||||||    
T  14202509 aaattagcttaaacaagctcacaaagaacaaacataatttctacccatttt 14202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 14633930 - 14633980
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  14633930 aaattagcttaaacaagctcacaaagaacaatcctaatttctacccatttt 14633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 24885725 - 24885675
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||||||||||||||||| ||||||    
T  24885725 aaattagcttaaacaagctcacaaagaacaaacctaatttctactcatttt 24885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 34139875 - 34139925
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  34139875 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttt 34139925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 1631850 - 1631888
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  1631850 aagctcacaaagaacaatcctaatttctacccatttttc 1631888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 11098796 - 11098727
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  11098796 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 11098727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 491
Target Start/End: Complemental strand, 26352352 - 26352269
Alignment:
Q  405 gaggcatcatgccacgttgcca-cctatcgtgccactaaggagttggtacgtaacaatacaatacttgaacttatctcctgcatcgtg 491  Q
    |||||| | ||||||||||||| || ||||||||||   ||||||||||    ||| |||||||||||| ||||||||||||||||||    
T  26352352 gaggcaccgtgccacgttgccaacccatcgtgccacattggagttggta----acagtacaatacttgatcttatctcctgcatcgtg 26352269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 36318127 - 36318165
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  36318127 aagctcacaaagaacaaccctaatttctacccatttttc 36318165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 42269613 - 42269697
Alignment:
Q  267 aatgtttcccaacccagaaga--atctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctc 350  Q
    |||||||||||||||  ||||  | |||||||| ||||||||||||| |||||| ||||||||| || ||  ||||||||||||||    
T  42269613 aatgtttcccaaccctcaagagaacctcactacaaagacactcaaccttaaagttacctcctttgta-ttcccaagtttctctctc 42269697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 17450657 - 17450601
Alignment:
Q  120 aaaaattagcttaaa--agctcataaagaacaaacctaatttctacccatttttcaa 174  Q
    |||||||||||| ||  |||||| ||||||||| |||||| ||||||||||||||||    
T  17450657 aaaaattagcttcaacaagctcacaaagaacaagcctaatctctacccatttttcaa 17450601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 41586429 - 41586352
Alignment:
Q  242 aaatctcactacccaaggtgattataa-tgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
    |||||||||||||||||||| ||| || ||||| ||||||||  |||| ||| |  | ||||||||||||||||||||    
T  41586429 aaatctcactacccaaggtgtttacaactgttttccaacccaagagaagctctcaccaaagacactcaaccctaaagt 41586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 33162568 - 33162604
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  33162568 aagctcacaaagaacaaccctaatttctacccatttt 33162604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 2e-72; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 12 - 378
Target Start/End: Complemental strand, 5817379 - 5817015
Alignment:
Q  12 aacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    ||||||||||||||  |||||| || ||||||||| |||| | |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||| |||    
T  5817379 aacaaacacaccaaagattgttaactcagttcggtccaatatgacctac-tctgg-ggagagagcagctctccaatccactaatatgaaagtgatacaaa 5817282  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
    | |||||  | ||||| || ||| |||||| |||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||     
T  5817281 ggggttacaagaaatttgcataagagctcacaaagaacaaaacctaatttctatccatttttcaagtcactcacactctcaatgaatcctaagaaaaaac 5817182  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    || |   |||| || |||||||||||||||||||||||||||| ||||||||  ||| |||||||||||||| |  |||| |||||||| ||||||||||    
T  5817181 acaaaaggaagctttttgatccttccaatggtgaaatctcactccccaaggtatttacaatgtttcccaaccaaatagaacctcactacaaagacactca 5817082  T
Q  309 accctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaat 378  Q
    ||| |||||| ||||||||| || ||  ||||||  ||||||||||||||||||| ||||| ||||||||    
T  5817081 accataaagttacctcctttgta-ttcccaagtt--tctctctctaagccacacataaaacttgaagaat 5817015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 20284066 - 20284416
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||| ||||||    
T  20284066 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactaagatgaaa 20284164  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || || | | |||  | ||||||||||| ||||| | ||| ||||||  |||||||||||||| |||||||  ||||||||| |||||||||||||    
T  20284165 gtgttacaatgcg-ttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccttttttcatatcacccacactctcaatgaatcc 20284263  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||| ||||||||    
T  20284264 taagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactac 20284363  T
Q  298 gaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctc 352  Q
     |||||||||||||||||||| ||||||  |||||  | ||||||||||||||||    
T  20284364 aaagacactcaaccctaaagttacctcc--tttataatccaagtttctctctctc 20284416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 83 - 328
Target Start/End: Original strand, 3047313 - 3047559
Alignment:
Q  83 caatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcaccc 181  Q
    ||||||||||||||||||||| || |||   ||||  | |||| | |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  3047313 caatccactaatatgaaagtggtacaaatgagttacaagaaatcaacttaaaagctcacaaagaacaagacctaatttctacccattttt-aagtcaccc 3047411  T
Q  182 acaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc 280  Q
    ||| |||||||||||| ||||| |||| || |   |||| || ||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  3047412 acactctcaatgaatcttaagataaaacacaaaaggaagctttttgatccttccaatgatgaaatctcactacccaagatgattatagtgtttcccaacc 3047511  T
Q  281 cagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||  |||| |||||||| |||||||||||||||||||| |||||||||    
T  3047512 caagagaacctcactacaaagacactcaaccctaaagttacctccttt 3047559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 23403133 - 23402783
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | ||||||||||| || |||||| ||||| ||||||  ||| | ||||| |||||  ||||  |||||| || ||||| ||||| ||||||    
T  23403133 tgaaagaaaggaacaaacacactaagattgttgacccaattcggtctaatatgaccta-atctgagggagtgagcagccctccaatctactaagatgaaa 23403035  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || || ||| |||  | ||||||||||| ||||| | ||| ||||||  ||||||||||||||||||||||  |||| |||| |||||||||||||    
T  23403034 gtgttacaatgag-ttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcacatcactcacactctcaatgaatcc 23402936  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |   |||| || |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||| ||||||||    
T  23402935 taagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactac 23402836  T
Q  298 gaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctc 352  Q
     |||||||||||||||||||| ||||||||| ||   | ||||||||||||||||    
T  23402835 aaagacactcaaccctaaagttacctcctttgta--atccaagtttctctctctc 23402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 2580378 - 2580694
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||||| |||||| |||| | |||||  ||||| ||||| ||||||||| ||||||||||| ||||||||| || || |    
T  2580378 aacaaacacaccaagattgttgacccaattcggtccaatatgacctag-tctgggggagagagcagctctccaatccactaagatgaaagtgttacaatg 2580476  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
    || |||  | ||| ||||||  ||||| | | ||||||||  |||| |||||||||||||||||  ||||||||| |||||||||||||||||||||||     
T  2580477 ag-ttacaagaaaatagcttgcaagcttacacaagaacaagtcctagtttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaac 2580575  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    || |   |||| || ||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||  |||| ||||| || ||||||||||    
T  2580576 acaaaaggaagctttttgatcctttcaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagaacctcac-acaaagacactca 2580674  T
Q  309 accctaaagtgacctccttt 328  Q
    |||||||||| |||||||||    
T  2580675 accctaaagttacctccttt 2580694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 2647816 - 2647489
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||| ||| |||||| ||||| |||||  |||| | |||||  ||||| ||||| |||||| || ||||||||||  ||||||    
T  2647816 tgaaagaaaggaacaaacacatcaagattgttgacccaattcggcccaatatgacctat-tctgggggagagagcagccctccaatccactatgatgaaa 2647718  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || |||   ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| |||||||||||||    
T  2647717 gtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcc 2647620  T
Q  199 taagagaaaatactatttgaagttatt-gatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |  ||||||| || |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||  |||  ||||||||    
T  2647619 taagagaaaacacaaaatgaagttttttgatccttccaatggtgaaatctcactacccaaggtgcttaccatgtttcccaacccaagagatcctcactac 2647520  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     |||||||||||||||||||| | |||||||    
T  2647519 aaagacactcaaccctaaagttatctccttt 2647489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 9190117 - 9189798
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | |||||  ||||| ||||| ||||||||| ||||||||||| ||||||||| || || |    
T  9190117 aacaaacacaccaagattgttgacccagttcggtccaatatgacctag-tctgggggagagagcagctctccaatccactaagatgaaagtgttacaatg 9190019  T
Q  112 aggtt-atgaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    || |  | ||||||| |||||  ||||| | | ||||||||  ||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  9190018 agttacaagaaaaat-agcttgcaagcttacacaagaacaagtcctaatttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaa 9189920  T
Q  209 tactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaag-acact 306  Q
     ||     |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||| || ||||| ||| |||||    
T  9189919 cacacaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagaacact 9189820  T
Q  307 caaccctaaagtgacctccttt 328  Q
    |||||||||||| | |||||||    
T  9189819 caaccctaaagttatctccttt 9189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 33332570 - 33332242
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||| |  ||| | ||||| |||||| ||||| |||||| || ||||||||||| ||||||    
T  33332570 tgaaagaaaggaacaaacacaccaagattgttgacccagttcgatctaatatgaccta-atctgggggagagagcagccctccaatccactaagatgaaa 33332472  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || |||   ||||  | ||||||||||| ||||| | ||| |||||| ||||||||||||| |||||||  | |||| |||| ||||||||| |||    
T  33332471 gtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcatttttgta-tcacgcacactctcaatgattcc 33332373  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |   |||| || ||||||||||||||||||||||||||||||||||| || ||| |||||||| |||||||  |||| || |||||    
T  33332372 taagagaaaacacaaagggaagctttttgatccttccaatggtgaaatctcactacccaagatgtttacaatgtttctcaacccaagagaaccttactac 33332273  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     || ||||||||||||||||| |||||||||    
T  33332272 aaaaacactcaaccctaaagttacctccttt 33332242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 19 - 328
Target Start/End: Complemental strand, 9185267 - 9184966
Alignment:
Q  19 acaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttat 118  Q
    ||||||| |||||| |||||||||||| |||| |||||||  ||||| ||||| || |||||| ||||||||||| ||||||||| || ||             
T  9185267 acaccaagattgttgacccagttcggtccaatataacctag-tctgggggagagagaagctctccaatccactaagatgaaagtgttacaa--------- 9185178  T
Q  119 gaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactattt 216  Q
    ||||||| |||||  ||||| | | ||||||||  ||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||| ||         
T  9185177 gaaaaat-agcttgcaagcttacacaagaacaagtcctaatttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaacacacaag 9185079  T
Q  217 gaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaa 315  Q
    |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||| || ||||| |||| ||||||||||||    
T  9185078 gaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagatactcaaccctaa 9184979  T
Q  316 agtgacctccttt 328  Q
    ||| |||||||||    
T  9184978 agttacctccttt 9184966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 350
Target Start/End: Original strand, 29159791 - 29160133
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | ||||| |||| | ||||| ||||||||| ||||||||||  ||||||||| || |||     
T  29159791 aacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 29159889  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaa 207  Q
      ||||  | ||||||||||| ||||| | | |||||||| |||||||||||||||||||||   |||||||||  || ||||  |||||||||||||||    
T  29159890 gagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatttttgt-gtcacccactctcacaatatgaatcctaagagaaa 29159988  T
Q  208 atactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagaca 304  Q
    | || |   |||| || ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||  ||  |||| |||||||  ||||||    
T  29159989 acacaaaaggaagctttttgatccttccaatgttgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactataaagaca 29160088  T
Q  305 ctcaaccctaaagtgacctcctttttatttttcaagtttctctctc 350  Q
    |||||||| ||||| ||||||||| || ||  ||||||||||||||    
T  29160089 ctcaacccaaaagttacctcctttgta-ttcccaagtttctctctc 29160133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 46516430 - 46516097
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||| | ||||| |||||| || ||||||||||  ||||||    
T  46516430 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctaggggagagagcagccctccaatccactatgatgaaa 46516332  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctc------aat 192  Q
    ||| || |||   ||||  | ||||||||||||||||| | | |||||||| || |||||||||||||||||    ||||||||||  | |      |||    
T  46516331 gtgttacaaaagagttacaagaaattagcttaaaagcttacacaagaacaagacataatttctacccattttgt--gtcacccacacacactccaccaat 46516234  T
Q  193 gaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatct 291  Q
    ||||| |||||||||| || |  ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||  |||  ||    
T  46516233 gaatcttaagagaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagatcct 46516134  T
Q  292 cactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||||| |||||||||||||||||||| |||||||||    
T  46516133 cactacaaagacactcaaccctaaagttacctccttt 46516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 6 - 174
Target Start/End: Complemental strand, 28617340 - 28617172
Alignment:
Q  6 gaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgat 105  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| | |||||| ||||| ||||| ||||||||| ||||||||||| |||||||||||    
T  28617340 gaagaaaacaaacacaccaatattgtttacccagttcggtccaatatgacctac-tctgggggagagagcagctctccaatccactaagatgaaagtgat 28617242  T
Q  106 ataaagaggttatgaaaaattagcttaaaagctcataaagaac-aaacctaatttctacccatttttcaa 174  Q
    | || | |||||  | ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  28617241 acaatggggttacaagaaattagcttaaaagctcacaaagaacaaaacctaatttctacctatttttcaa 28617172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 4796776 - 4796461
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||  | ||||| |||||| ||||| |||||| ||  |||||||||  |||||| || || |||     
T  4796776 aacaaacacaccaagattgttaacccagttcggtccaaaatgaccta-atctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaa 4796678  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
      ||||  | ||||||||||| ||||| | | |||||||| |||| |||| ||||||||||    |||||| ||| |||||||||||||||||||||||     
T  4796677 gagttacaagaaattagcttataagcttacacaagaacaagacctcatttatacccattttgt--gtcacctacattctcaatgaatcctaagagaaaac 4796580  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  |||  |||||||| ||||||||||    
T  4796579 acaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactca 4796480  T
Q  309 accctaaagtgacctccttt 328  Q
    | |||||||| |||||||||    
T  4796479 a-cctaaagttacctccttt 4796461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 152 - 304
Target Start/End: Complemental strand, 9235551 - 9235398
Alignment:
Q  152 cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcac 250  Q
    ||||||||||||||||||||||  |||||| || |||||| |||||||||||||||| || |   |||| || ||||||||| |||||||||||| ||||    
T  9235551 cctaatttctacccatttttcatatcacccgcactctcaacgaatcctaagagaaaacacaaaaggaagctttttgatccttgcaatggtgaaatatcac 9235452  T
Q  251 tacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagaca 304  Q
    || |||||||| ||| ||||||||||||||||  ||||||||||||||||||||    
T  9235451 tatccaaggtgtttacaatgtttcccaacccaagagaatctcactacgaagaca 9235398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 12 - 282
Target Start/End: Original strand, 35960804 - 35961076
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||| ||||||||||||| | ||||| |||||| ||||| |||||| || ||| ||||||  ||||||||| || |||     
T  35960804 aacaaacacaccaagattgttgaccgagttcggttcaatatgaccta-atctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaat 35960902  T
Q  112 aggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctca-atgaatcctaagagaaaa 208  Q
      ||||  | ||||||||||| ||||| | ||| |||||| |||||||||||||||||||| ||  ||||||||| ||  | ||||||| ||||||||||    
T  35960903 gagttagaagaaattagcttataagcttacaaaagaacaatacctaatttctacccatttt-catatcacccacactcaaagatgaatcttaagagaaaa 35961001  T
Q  209 tactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaaccca 282  Q
      | |   |||| || ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  35961002 cgcaaaaggaagctttttgatccttccaatggtgaaatctcactacctaaggtgtttacaatgtttcccaaccca 35961076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 47263867 - 47263971
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |  ||| ||||||||| |||||||||||||||||||| ||||    
T  47263867 ttgatccttccaatggtgaaatctcactacccaaggtatttacaatgtttcccaaccgaagagattctcactacaaagacactcaaccctaaagttacct 47263966  T
Q  324 ccttt 328  Q
    |||||    
T  47263967 ccttt 47263971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 261
Target Start/End: Original strand, 55936 - 56187
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| ||| || |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||||| || |||     
T  55936 aacaaacacaccaagattattgacccagttcggtccaatatgaccta-atctgg-ggagagagcagccctccaatccactatgatgaaagtgttacaaaa 56033  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctc---aatgaatcctaagagaa 206  Q
      ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| ||||   |||||||||||||||||    
T  56034 gagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaataatgaatcctaagagaa 56131  T
Q  207 aatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtg 261  Q
    || || |   |||| || ||||||||||||||||||||||||||||||||||||||    
T  56132 aacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtg 56187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 2479537 - 2479641
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||  ||||||||||||||||||||  |||    
T  2479537 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttccct 2479636  T
Q  324 ccttt 328  Q
    |||||    
T  2479637 ccttt 2479641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 225 - 328
Target Start/End: Original strand, 21989110 - 21989213
Alignment:
Q  225 tgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctc 324  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||| |||||||| |||||    
T  21989110 tgatccttccaatggtaaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaacctaaagttacctc 21989209  T
Q  325 cttt 328  Q
    ||||    
T  21989210 cttt 21989213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 44848015 - 44847917
Alignment:
Q  230 cttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||| |||||||||    
T  44848015 cttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctccttt 44847917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 49091638 - 49091922
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | ||||||| |||||| |||||| ||||||||  || |||| | ||||| |||||| | ||| |||| |||| ||||||||||  ||||||    
T  49091638 tgaaagaaaggaacaaacgcaccaagattgttgacccagtttagtccaatatgaccta-atctggggaagagagcaactctccaatccactatgatgaaa 49091736  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctc---aatgaa 195  Q
    ||| || |||   ||||  | |||||| |||| ||||| | | |||||||| |||||||||||||||||| |    |||||||||| ||||   ||||||    
T  49091737 gtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctacccattctgt--gtcacccacactctccataatgaa 49091834  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaaccca 282  Q
    ||||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  49091835 tcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgttttcaatgtttcccaaccca 49091922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 18413843 - 18413947
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||  ||||||||||||  |||  |||||||| |||||||||||||||| |||  |||    
T  18413843 gatccttccaatggtgaaatctcactacccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 18413942  T
Q  324 ccttt 328  Q
    |||||    
T  18413943 ccttt 18413947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 21640013 - 21640117
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||| |||  |||    
T  21640013 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccct 21640112  T
Q  324 ccttt 328  Q
    |||||    
T  21640113 ccttt 21640117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 21646211 - 21646315
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||| |||  |||    
T  21646211 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtttcct 21646310  T
Q  324 ccttt 328  Q
    |||||    
T  21646311 ccttt 21646315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 18408967 - 18409071
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||  ||||||||||||||||||||||||||| ||| ||||  ||||||||||||  |||  |||||||| |||||||||||||||| |||  |||    
T  18408967 gatccttttaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 18409066  T
Q  324 ccttt 328  Q
    |||||    
T  18409067 ccttt 18409071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 21983488 - 21983544
Alignment:
Q  225 tgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaaccc 281  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  21983488 tgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttccccaccc 21983544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 1533334 - 1533244
Alignment:
Q  226 gatccttccaatggtgaaatc-tcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  1533334 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 1533244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44848805 - 44848693
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||||||| || ||||||||| |  ||||| ||||||||||||||||| | ||||| | |||| ||||| ||||||||| ||||||||||  ||||    
T  44848805 tgaaagaaggaa-catacacaccaaaagattgttgacccagttcggttcaatatgaccta-acctgggggagagagcagctctccaatccactatgatga 44848708  T
Q  99 aagtgatataaagag 113  Q
    ||||| || ||||||    
T  44848707 aagtgttacaaagag 44848693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 45685725 - 45685658
Alignment:
Q  142 aaagaacaaacct-aatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    ||||||||||||| |||||||| |||||||| ||||||| || | || ||||||||||||||||||||    
T  45685725 aaagaacaaaccttaatttctatccattttttaagtcactcaaagtcgcaatgaatcctaagagaaaa 45685658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 761271 - 761328
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaac-ctaatttctacccatttttcaagtca 178  Q
    |||| |||| ||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  761271 aaatgagctcaaaagctcacaaagaaaaaacactaatttctacccatttttcaagtca 761328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 2479313 - 2479479
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    ||||||||| ||||||||||||||| |  ||||| ||||||||||||||||| | ||||| |||| | || || |||||||||  |||||||||  ||||    
T  2479313 tgaaagaag-aaacaaacacaccaaaagattgttgacccagttcggttcaatatgaccta-atctag-ggggagagcagctctcaaatccactatgatga 2479409  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccat 167  Q
    ||||| || ||||| ||||| | ||| ||||||  ||||| | | |||||||| |||||||||||||||||    
T  2479410 aagtgttacaaaga-gttataagaaaatagcttgcaagcttacacaagaacaagacctaatttctacccat 2479479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 38671326 - 38671376
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  38671326 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttt 38671376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 41649115 - 41649166
Alignment:
Q  122 aaattagcttaa-aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||||| || ||||||| ||||||||||||||||||||||| |||||||    
T  41649115 aaattagctaaacaagctcacaaagaacaaacctaatttctaccaatttttc 41649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 2058196 - 2058265
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  2058196 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 2058265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 2390332 - 2390294
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  2390332 aagctcacaaagaacaaccctaatttctacccatttttc 2390294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 4538662 - 4538696
Alignment:
Q  138 tcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||||||||| |||||||||||||||||||||    
T  4538662 tcataaagaacaaccctaatttctacccatttttc 4538696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 27984632 - 27984673
Alignment:
Q  172 caagtcacccacaatctcaatgaatcctaagagaaaatacta 213  Q
    ||||||||||||| || ||||||||||| |||||||||||||    
T  27984632 caagtcacccacactcacaatgaatccttagagaaaatacta 27984673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 2361090 - 2361126
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  2361090 aagctcacaaagaacaaccctaatttctacccatttt 2361126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 6432021 - 6431985
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  6432021 aagctcacaaagaacaatcctaatttctacccatttt 6431985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 21988896 - 21988972
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccact 91  Q
    |||||||||||| | |||||| |||||||||||| |||| | ||||| |||||||||||  |||| |||| |||||||||    
T  21988896 aacaaacacaccgagattgttgacccagttcggtccaatatgaccta-atctggaggag--agcaactctccaatccact 21988972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 22270023 - 22269987
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  22270023 aagctcacaaagaacaaccctaatttctacccatttt 22269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 26417366 - 26417330
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  26417366 aagctcacaaagaacaaccctaatttctacccatttt 26417330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 29608787 - 29608751
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  29608787 aagctcacaaagaacaaccctaatttctacccatttt 29608751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30814631 - 30814587
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggt 45  Q
    |||||||| | |||||||||||||| |||||| ||||||||||||    
T  30814631 tgaaagaaaggaacaaacacaccaaaattgttgacccagttcggt 30814587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 31518845 - 31518809
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  31518845 aagctcacaaagaacaaacctaatttctacctatttt 31518809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 31733087 - 31733123
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  31733087 aagctcacaaagaacaaccctaatttctacccatttt 31733123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 48491504 - 48491453
Alignment:
Q  299 aagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    ||||| |||||||||||||| |||||| ||| |||| ||||||||||||||||    
T  48491504 aagaccctcaaccctaaagttacctcc-tttgatttatcaagtttctctctct 48491453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 48599452 - 48599488
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  48599452 aagctcacaaagaacaaccctaatttctacccatttt 48599488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 49091918 - 49091994
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||||||||| ||  ||||||||||||||||  | |  |||| ||| ||||||||||||| |||||| |||||||||    
T  49091918 acccaaggtgttttcaatgtttcccaacccaagatatcctcagtacaaagacactcaaccttaaagttacctccttt 49091994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 28832236 - 28832562
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    ||||||||  ||||||||||||||| |||||| |||| ||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||| ||||||    
T  28832236 tgaaagaaacaaacaaacacaccaagattgttgacccggttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactaagatgaaa 28832334  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaac-ctaatttctacccatttttcaagtcacccacaatctcaatgaatcct 199  Q
    ||| || || ||| |||  | ||||||||||| |||  || |||||||||   |||||||||||||||||||||  ||||||||| ||||||||||||||    
T  28832335 gtgttacaatgag-ttacaagaaattagcttataagtaca-aaagaacaagttctaatttctacccatttttcatatcacccacactctcaatgaatcct 28832432  T
Q  200 aagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacg 298  Q
    ||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||| ||||||||     
T  28832433 aagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactaca 28832532  T
Q  299 aagacactcaaccctaaagtgacctccttt 328  Q
    |||||||||||| ||||||| |||||||||    
T  28832533 aagacactcaactctaaagttacctccttt 28832562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 83 - 328
Target Start/End: Complemental strand, 11181871 - 11181624
Alignment:
Q  83 caatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacc 180  Q
    ||||||||||| |||||||||||| |||   ||||  | |||||||| |||||||||  ||| |||||| |||||||||||||||||||| || ||||||    
T  11181871 caatccactaagatgaaagtgatacaaatgagttacaagaaattagcctaaaagctctcaaatgaacaagacctaatttctacccatttt-catgtcacc 11181773  T
Q  181 cacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaac 279  Q
    |||| || |||||||||||||||||||| || |   |||| || |||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  11181772 cacactcacaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatttcactacccaaggtgtttacaatgtttcccaac 11181673  T
Q  280 ccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||  |||| |||||||| ||||||||||||| |||||| |||||||||    
T  11181672 ccaagagaacctcactacaaagacactcaaccataaagttacctccttt 11181624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 75 - 324
Target Start/End: Complemental strand, 7160950 - 7160700
Alignment:
Q  75 cagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatttttca 173  Q
    ||||||| ||||||||| | |||||||||||| |||| |||||  ||||||||| || |||||||| ||||||||| || ||||||||||  |||||| |    
T  7160950 cagctctccaatccactcagatgaaagtgatacaaaggggttacaaaaaattagatttaaagctcacaaagaacaagacttaatttctacatatttttta 7160851  T
Q  174 agtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtt 272  Q
    ||||||  ||| ||||||||||||||||||||||| |  |  ||||| || ||||||||||||||| ||||||||||||  |||||||||||| ||||||    
T  7160850 agtcact-acactctcaatgaatcctaagagaaaacataaaatgaagctttttgatccttccaatgatgaaatctcactgtccaaggtgattacaatgtt 7160752  T
Q  273 tcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctc 324  Q
    |||||| |||  |||| |||||||| |||||||||||||||||||| |||||    
T  7160751 tcccaatccaagagaacctcactacaaagacactcaaccctaaagttacctc 7160700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 2 - 377
Target Start/End: Original strand, 10281728 - 10282105
Alignment:
Q  2 gaaagaaggaaacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    ||||||| | ||||||||||||||  |||||| |||||||||||| |||| | ||||  |||||| ||||| ||||||||| ||||||||||  ||||||    
T  10281728 gaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatatgacctg-atctgggggagagagcagctctccaatccactatgatgaaa 10281826  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaat 196  Q
    ||| || |||   ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| || ||||  ||||    
T  10281827 gtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactcacaatatgaat 10281924  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctca 293  Q
    |||||||||||| || |    ||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||  ||  |||| ||||    
T  10281925 cctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcacaaccctcaagagaacctca 10282024  T
Q  294 ctacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaa 377  Q
    |||| |||||||||||||||||||| ||||||||| || || |||||||  |||||||| ||||||||| ||||| ||||||||    
T  10282025 ctacaaagacactcaaccctaaagttacctcctttgta-ttctcaagtt--tctctctcaaagccacactcaaaagatgaagaa 10282105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 31300705 - 31300387
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | |||||  ||||  ||||| || | |||| ||||||||||| ||||||||| ||||| |    
T  31300705 aacaaacacaccaagattgttgacccagttcggtccaatatgacctag-tctgagggagagagaaactctccaatccactaagatgaaagtgttataatg 31300607  T
Q  112 aggtt-atgaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    || |  | ||||||| || ||  ||||| | | ||||||||  |||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||    
T  31300606 agttgcaagaaaaat-agtttgcaagcttacacaagaacaagtcctaatttctacccatttctcatatcacccacactctcaatgaatcctaagagaaaa 31300508  T
Q  209 tactatttgaagt-tattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactc 307  Q
     || |   ||||  | |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||  |||| |||||||| |||||||||    
T  31300507 cacaaaaggaagccttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaagagaacctcactacaaagacactc 31300408  T
Q  308 aaccctaaagtgacctccttt 328  Q
    |||| |||||| |||||||||    
T  31300407 aaccttaaagttacctccttt 31300387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 357
Target Start/End: Complemental strand, 17004080 - 17003724
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||||||||||||||  ||||||    
T  17004080 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctcttcaatccactatgatgaaa 17003982  T
Q  101 gtgatataaagag-gttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaa 195  Q
    || || | || || ||||  |||||||| |||| ||||| | | |||||||| |||||||||||||||||||   |  |||| |||  || ||||  |||    
T  17003981 gt-atttcaaaagagttacaaaaaattaacttacaagcttacacaagaacaagacctaatttctacccattta--atttcactcactctcacaatatgaa 17003885  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||  |||| |||||    
T  17003884 tcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttccaaacccaagagaacctcac 17003785  T
Q  295 tacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagc 357  Q
    ||| |||||| ||||||||||||| | ||||||| ||   | |||||||||||||||| ||||    
T  17003784 tacaaagacattcaaccctaaagttatctcctttgta--atccaagtttctctctctcaaagc 17003724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 19588723 - 19589050
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | ||||||||| | || |||||| |||||||||||| |||| | | ||| ||||   ||||| |||||| || ||||||||||  ||||||    
T  19588723 tgaaagaaaggaacaaacactcaaagattgttgacccagttcggtccaatatgaacta-atcttagggagagagcagccctccaatccactatgatgaaa 19588821  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || |||   ||||  | |||||| |||| ||||| | | |||||||| ||||||||||||||| ||||    ||||||||||||||||||||||||    
T  19588822 gtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctaccctttttgt--gtcacccacaatctcaatgaatcc 19588919  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    |||||||||| || |   |||| || |||||||||||||||||||||||||||| |||||| || ||| ||||||||||||||||  |||  ||||||||    
T  19588920 taagagaaaacacaaaaggaagatttttgatccttccaatggtgaaatctcactgcccaagatgtttacaatgtttcccaacccaagagatcctcactac 19589019  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     |||||||||||||||||| | |||||||||    
T  19589020 aaagacactcaaccctaaaattacctccttt 19589050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 61 - 374
Target Start/End: Complemental strand, 33031001 - 33030687
Alignment:
Q  61 tctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taattt 159  Q
    ||||| ||||| ||||||||| |||| |||||| |||||||||||  || | |||||  | ||||||||||||||||||| |||||||||| | ||||||    
T  33031001 tctgggggagagagcagctctccaattcactaagatgaaagtgatgcaatggggttacaagaaattagcttaaaagctcacaaagaacaaaacataattt 33030902  T
Q  160 ctacccatttttcaagtcacccacaatctcaatgaatcctaagag-----aaaatactatttgaagttattgatccttccaatggtgaaatctcactacc 254  Q
    |||||||||||||||||||| |||| |||||||||||||||||||     |||| ||||   |||| | ||  | ||  |||||||||||||||||||||    
T  33030901 ctacccatttttcaagtcactcacactctcaatgaatcctaagagaaattaaaacactaaaggaagctttttgttct--caatggtgaaatctcactacc 33030804  T
Q  255 caaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctcta 354  Q
    |||| |||||| ||| |||| |||||||  |||| |||  ||| || | ||||||||||||||| ||||| ||| ||||| | | |||||||| |||  |    
T  33030803 caagatgattacaatatttctcaacccaagagaacctcgttac-aaaatactcaaccctaaagttacctcttttgtatttct-aggtttctctttct-aa 33030707  T
Q  355 agccacacacaaaacatgaa 374  Q
    ||||||||||||||||||||    
T  33030706 agccacacacaaaacatgaa 33030687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 11917081 - 11916764
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||| | |||||| |||||||||||| |||| | ||||| || ||| ||||| ||||||||| ||||||||||  ||||||||| || |||     
T  11917081 aacaaacacaccgagattgttgacccagttcggtccaatatgaccta-atatgggggagagagcagctctccaatccactataatgaaagtgttacaaaa 11916983  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaa----tgaatcctaagaga 205  Q
      ||||  | ||| ||| ||  ||||| | | |||||||| ||||||||||||||||||||    |||||||||  ||||||    |||| |||||||||    
T  11916982 gagttacaagaaaatagtttgcaagcttacacaagaacaagacctaatttctacccattttgt--gtcacccac--tctcaaacgatgaaccctaagaga 11916887  T
Q  206 aaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacac 305  Q
    ||| || |   |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||| ||    
T  11916886 aaacacaaaaggaagtttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaac 11916787  T
Q  306 tcaaccctaaagtgacctccttt 328  Q
    ||||||||||||| |||||||||    
T  11916786 tcaaccctaaagttacctccttt 11916764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 152 - 328
Target Start/End: Complemental strand, 24553496 - 24553319
Alignment:
Q  152 cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcac 250  Q
    |||||||||||||||||||| |  | ||||||| ||| ||||||| ||||||||||| || |   |||| || |||||||||| ||||||||||||||||    
T  24553496 cctaatttctacccattttttatatgacccacactcttaatgaattctaagagaaaacacaaaaggaagctttttgatccttctaatggtgaaatctcac 24553397  T
Q  251 tacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||| ||| ||||||||||||||||  |||| |||||||| ||||||||||||||| |||| |||||||||    
T  24553396 tacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaacccttaagttacctccttt 24553319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 2630218 - 2630460
Alignment:
Q  11 aaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    |||||||| || |||||||||| ||| |||||||| |||| | |||| | | ||  ||||||||||||||||||||||||||  |||||||||||| |||    
T  2630218 aaacaaacgcatcaatattgttaacctagttcggtccaatatgacctgctt-tgagggagatagcagctcttcaatccactatgatgaaagtgatacaaa 2630316  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaagaac-aaacctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
      |||||  | |||||||||||||| | || ||||||| ||||||||||| ||  ||||||||||||||||| || || ||||||||||||||||||||     
T  2630317 agggttacaataaattagcttaaaaacacacaaagaacaaaacctaatttttatacatttttcaagtcaccctcactcacaatgaatcctaagagaaaac 2630416  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcacta 252  Q
    ||||   |||| || ||||||||| |||||||||||| ||||||    
T  2630417 actaaaggaagctttttgatcctttcaatggtgaaatttcacta 2630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 42127530 - 42127269
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||| |  ||| | ||||| |||||| ||||| |||||| |  ||||||||||| ||||||    
T  42127530 tgaaagaaaggaacaaacacaccaagattgttgacccagttcgatctaatatgaccta-atctgggggagagagcagccccccaatccactaagatgaaa 42127432  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || || ||| |||  | ||||||||||| ||||| | ||| ||||||  |||| |||||||||||||||||  ||||||||| |||||||||||||    
T  42127431 gtgttacaatgag-ttacaagaaattagcttataagcttacaaaagaacaagtcctactttctacccatttttcatatcacccacactctcaatgaatcc 42127333  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtg 261  Q
    |||||||||| || |    ||| || ||||||||||||||||||||||||||||||||||||||    
T  42127332 taagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtg 42127269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 14520205 - 14520535
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | |||||||||||||| |  ||||| |||||||||||| |||| | ||||| |||| | || || ||||||||||||||||||||  ||||    
T  14520205 tgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctaggggggagagcagctcttcaatccactatgatga 14520303  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---g 193  Q
    ||||| || |||||| |||  | ||| ||||||  ||||| | | |||||||| ||||||||||||||||||| |   || ||||||  |||||||   |    
T  14520304 aagtgttacaaagag-ttacaagaaaatagcttgcaagcttacacaagaacaagacctaatttctacccatttgt---gttacccactctctcaattatg 14520399  T
Q  194 aatcctaa-gagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctc 292  Q
    || ||||| ||||| | || |   |||| | ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||  |||  |||    
T  14520400 aaccctaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctc 14520499  T
Q  293 actacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||| |||||||||||||||||||| |||||||||    
T  14520500 actacaaagacactcaaccctaaagttacctccttt 14520535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 6741839 - 6742036
Alignment:
Q  12 aacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    ||||||||||||||  ||| || || |||||||||||||| | || ||| ||||| ||| | ||||||||| ||||||| ||| ||| |||||||| |||    
T  6741839 aacaaacacaccaaagattattaacacagttcggttcaatatgacatac-tctgggggatagagcagctctccaatccattaagatggaagtgatacaaa 6741937  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    || ||||  | ||||||||||  || |||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  6741938 gaagttacaagaaattagcttgcaaactcacaaagaacaaaacctaatttctactcatttttcaagtcacccacactctcaatgaatcctaagaaaaaa 6742036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 12084297 - 12083969
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaa--tattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | ||||||||||||||  ||||||| |||||||||||| || | | ||||| || ||| | ||| ||||||||| ||||||||||  ||||    
T  12084297 tgaaagaaaggaacaaacacaccaaaatattgttgacccagttcggtccactatgaccta-atatggggcagagagcagctctccaatccactatgatga 12084199  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--ga 194  Q
    ||||| || |||||| |||  | |||||| |||||||||| | | |||||||| ||||||||||||||||||| |   |||||||||  || ||||  ||    
T  12084198 aagtgttacaaagag-ttacaagaaattaacttaaaagcttacacaagaacaagacctaatttctacccatttgt---gtcacccactctcacaatatga 12084103  T
Q  195 atcctaagagaaaatactatttgaagttattgatccttccaa-tggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctca 293  Q
    ||||||||| |||| || |   |||| | || |||||||||| ||||||| ||||||||||||||||| ||| ||||||| ||||||||  |||  ||||    
T  12084102 atcctaagaaaaaacacaaaaggaagctttt-atccttccaaatggtgaattctcactacccaaggtgtttaaaatgtttaccaacccaagagatcctca 12084004  T
Q  294 ctacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||  |||||||||||||||||||| |||||||||    
T  12084003 ctataaagacactcaaccctaaagttacctccttt 12083969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 9353228 - 9353124
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||| ||||||||||| ||||    
T  9353228 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacttaaccctaaagttacct 9353129  T
Q  324 ccttt 328  Q
    |||||    
T  9353128 ccttt 9353124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 224 - 318
Target Start/End: Original strand, 15464735 - 15464829
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||  |||  |||||||| ||||||||||||||||||||    
T  15464735 ttgatccttccaatggtgaaatctcactacccaaggtgtttacgatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagt 15464829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 36932244 - 36932140
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||   ||||||  ||||||||||||||||||||  |||    
T  36932244 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcatcactataaagacactcaaccctaaagttccct 36932145  T
Q  324 ccttt 328  Q
    |||||    
T  36932144 ccttt 36932140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 42127266 - 42127162
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||  |||| |||||||| |||| |||||||| |||||| ||||    
T  42127266 ttgatccttccaatggtgaaatctcactacccaaggtgtatacaatgtttctcaacccaagagaacctcactacaaagatactcaaccttaaagttacct 42127167  T
Q  324 ccttt 328  Q
    |||||    
T  42127166 ccttt 42127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 38219603 - 38219707
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||  |||  |||||||| |||||||||||||||| |||  |||    
T  38219603 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 38219702  T
Q  324 ccttt 328  Q
    |||||    
T  38219703 ccttt 38219707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 35387858 - 35387971
Alignment:
Q  217 gaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaacccta 314  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||  |||  ||| |||| ||||||||||||||||    
T  35387858 gaagttttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaacccta 35387957  T
Q  315 aagtgacctccttt 328  Q
     |||  ||||||||    
T  35387958 gagttccctccttt 35387971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 333
Target Start/End: Original strand, 3880291 - 3880612
Alignment:
Q  16 aacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggt 115  Q
    |||||||||| |||||| |  |||||| || |||| | ||||| |||||  | ||| ||||||||| ||||||||||  ||||||||| || |||   ||    
T  3880291 aacacaccaagattgttgattcagttctgtccaatatgaccta-atctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagt 3880389  T
Q  116 tatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaaatac 211  Q
    ||  | ||||||| ||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||  || ||||  |||||||| ||||||| ||    
T  3880390 tacaagaaattagtttacaagcttacacaagaacaagacctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaggagaaaaaac 3880487  T
Q  212 tatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagacactca 308  Q
     |   |||| || ||||||||||||||||||||||||||| |||||| ||| ||| |||||||| |||||  ||  |||| |||||||| | ||||||||    
T  3880488 aaaaggaagctttttgatccttccaatggtgaaatctcacaacccaatgtgtttacaatgtttctcaaccctcaagagaacctcactacaaggacactca 3880587  T
Q  309 accctaaagtgacctcctttttatt 333  Q
    || || |||| ||||||||| ||||    
T  3880588 actctcaagttacctcctttgtatt 3880612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 33831744 - 33831692
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttttc 172  Q
    |||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  33831744 aaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttttc 33831692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 313
Target Start/End: Original strand, 24136053 - 24136143
Alignment:
Q  226 gatccttccaatggtgaaatc-tcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||  ||||||||||||  |||  ||  |||| |||||||||||||||    
T  24136053 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaaccct 24136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 27637731 - 27637767
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||||||||||||| |||||||||||||||||||    
T  27637731 aagctcataaagaacaaccctaatttctacccatttt 27637767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 8566050 - 8566100
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||||||||| |||||||||||||    
T  8566050 aaattagcttaaacaagctcacaaagaacaaacctaagttctacccatttt 8566100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 3651617 - 3651655
Alignment:
Q  142 aaagaacaaacc-taatttctacccatttttcaagtcac 179  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  3651617 aaagaacaaaccctaatttctacccatttttcaagtcac 3651655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 16452130 - 16452092
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  16452130 aagctcagaaagaacaaacttaatttctacccatttttc 16452092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 268
Target Start/End: Original strand, 30899942 - 30900111
Alignment:
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaac-ctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||||||| ||||||||||  | |||||||| || ||||||| ||||||||||| ||| |||||||  |||||||||| ||| || |  | ||| ||||||    
T  30899942 agtgatacaaagaggttacaagaaattagcctacaagctcacaaagaacaaactctattttctactgatttttcaagccactcaaacccacaaagaatcc 30900041  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataa 268  Q
    | |||||||| ||||    ||| || || ||||||||  |  |||||||||||||||||||||| ||||||    
T  30900042 t-agagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttataa 30900111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 213515 - 213479
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  213515 aagctcacaaagaacaaccctaatttctacccatttt 213479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 3075776 - 3075812
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  3075776 aagctcacaaagaacaaacctaatttctacctatttt 3075812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 4410301 - 4410238
Alignment:
Q  28 ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccacta 92  Q
    ||||| |||||||||||| |||||| |||||  ||||| ||||| ||||||||| ||||||||||    
T  4410301 ttgttgacccagttcggtccaatctgaccta-gtctgggggagagagcagctctccaatccacta 4410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 170
Target Start/End: Original strand, 28750777 - 28750809
Alignment:
Q  138 tcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||||||||| |||||||||||||||||||    
T  28750777 tcataaagaacaaccctaatttctacccatttt 28750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 30802878 - 30802839
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttcaa 174  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  30802878 aagctcacaaagaacaaacctaa-ttctacccatttttcaa 30802839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 38747055 - 38747019
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  38747055 aagctcacaaagaacaaccctaatttctacccatttt 38747019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 7e-63; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 31979501 - 31979817
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | || || |||||| ||||| |||||| || ||||||||||| ||||||||| |  |||     
T  31979501 aacaaacacaccaagattgttgacccagttcggtccaatatgacata-atctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaa 31979599  T
Q  112 aggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
      ||||  | |||||| |||| ||||| | ||| |||||| |||||||||||||||||||||   |||||||||| |||||||||||||||||||||||     
T  31979600 gagttacaagaaattaacttataagcttacaaaagaacaagacctaatttctacccatttttgt-gtcacccacactctcaatgaatcctaagagaaaac 31979698  T
Q  210 actatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaa 309  Q
    || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||| |||||||| |||||||||||    
T  31979699 acaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaaaagaacctcactacaaagacactcaa 31979798  T
Q  310 ccctaaagtgacctccttt 328  Q
    ||||||||| |||||||||    
T  31979799 ccctaaagttacctccttt 31979817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 31936575 - 31936880
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||| |||||||| |||| | |||||  |||||  |||| ||||||||| ||||||||||||||||||||| || ||      
T  31936575 aacaaacacaccaagattgttgacctagttcggtccaatatgacctag-tctgggagagagagcagctctccaatccactaatatgaaagtgttacaa-- 31936671  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
           |||||  ||||||  ||||| | | ||||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||     
T  31936672 -------gaaaa--tagcttgcaagcttacacaagaacaaatcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaac 31936762  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||    
T  31936763 acaaa--gaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactca 31936860  T
Q  309 accctaaagtgacctccttt 328  Q
    |||||||||| |||||||||    
T  31936861 accctaaagttacctccttt 31936880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 12 - 325
Target Start/End: Complemental strand, 5572350 - 5572038
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||||| |||||| |||| | ||||| |||| | ||||| |||||| || ||||||||||  ||||||||| || |||     
T  5572350 aacaaacacaccaagattgttgacccaattcggtccaatatgaccta-atctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 5572252  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
      ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||| ||||||    |||||||||| |||||||||||||||||||||||     
T  5572251 gagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacgcattttgt--gtcacccacactctcaatgaatcctaagagaaaac 5572154  T
Q  210 actatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaa 309  Q
    || |   |||| | |||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||||||  |||  | |||||| ||||||| |||    
T  5572153 acaaaaggaagcttttgatcattccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatccccactacaaagacacccaa 5572054  T
Q  310 ccctaaagtgacctcc 325  Q
    ||||||||| ||||||    
T  5572053 ccctaaagttacctcc 5572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 29 - 333
Target Start/End: Original strand, 14521679 - 14521986
Alignment:
Q  29 tgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattag 128  Q
    |||| ||| |||||||| |||| | |||||| ||| ||||||| |||| |||| |||| || ||| |||||||||||| |||   ||||  |||||||||    
T  14521679 tgttgacctagttcggtccaatatgacctac-tctcgaggagagagcacctctccaattcaataagatgaaagtgatacaaatgagttac-aaaaattag 14521776  T
Q  129 cttaaaagctcataaagaaca-aacctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattg 226  Q
    |  || |||||| |||||||| |||||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||| | ||   |||| || ||     
T  14521777 cacaagagctcacaaagaacacaacctaatttctacacatttttcatgtcacccacactctcaataaatcctaagagaaaacattaaaggaagatttttt 14521876  T
Q  227 atccttccaatggtgaaa-tctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||  ||  |||| || ||||| |||||| | ||||||||||| ||||    
T  14521877 atccttccaatggtgaaattctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctaactacaaagacattaaaccctaaagttacct 14521976  T
Q  324 cctttttatt 333  Q
    | ||| ||||    
T  14521977 catttgtatt 14521986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 22963677 - 22963994
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||| | |||||| ||||| |||||| || ||||||||||  ||||||    
T  22963677 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtgcaatatgaccaa-atctgg-ggagagagcagccctccaatccactatgatgaaa 22963774  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagtcacccacaatctc---aatgaat 196  Q
    ||| || |||   ||||  | ||||||||||| || || | | | ||||| || ||||||||||||||||||   ||||| |||| ||||   |||||||    
T  22963775 gtgttacaaaagagttacaagaaattagcttataaccttacacaaaacaagccgtaatttctacccattttt--tgtcactcacactctcaataatgaat 22963872  T
Q  197 cctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcacta 296  Q
    ||||| |||||| || |   ||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||  |||   ||||||    
T  22963873 cctaaaagaaaacacaaagggaaatttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatcttcacta 22963972  T
Q  297 cgaagacactcaaccctaaagt 318  Q
    | ||||||||||||||||||||    
T  22963973 caaagacactcaaccctaaagt 22963994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 23824716 - 23824399
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||| | |||||| ||||| |||||| || ||||||||||  ||||||    
T  23824716 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtgcaatatgaccaa-atctgg-ggagagagcagccctccaatccactatgatgaaa 23824619  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagtcacccacaatctc---aatgaat 196  Q
    ||| || |||   ||||  | ||||||||||| || || | | | ||||| || ||||||||||||||||||   ||||| |||| ||||   |||||||    
T  23824618 gtgttacaaaagagttacaagaaattagcttataaccttacacaaaacaagccgtaatttctacccattttt--tgtcactcacactctcaataatgaat 23824521  T
Q  197 cctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcacta 296  Q
    ||||| |||||| || |   ||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||  |||   ||||||    
T  23824520 cctaaaagaaaacacaaagggaaatttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatcttcacta 23824421  T
Q  297 cgaagacactcaaccctaaagt 318  Q
    | ||||||||||||||||||||    
T  23824420 caaagacactcaaccctaaagt 23824399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 31086593 - 31086266
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| ||||||||| || |||| | | ||| |||| | ||||| |||| |||| ||||||||||  ||||||    
T  31086593 tgaaagaaaggaacaaacacaccaagattgttgacccagttcagtccaatatgatcta-atctaggggagagagcaactctccaatccactatgatgaaa 31086495  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctc-aatgaatc 197  Q
    ||| || ||||  ||||  | ||||||||||| ||||| | | |||| ||| ||||||||||||||||||||    |||||||||| ||   ||||||||    
T  31086494 gtgttacaaaggagttacaagaaattagcttataagcttacacaagagcaagacctaatttctacccattttgt--gtcacccacactcaataatgaatc 31086397  T
Q  198 ctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    ||||||||||| |  |   |||| | ||||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| |  |||  ||||||||    
T  31086396 ctaagagaaaacataaaaagaagcttttgatccttccaatggtgaaatctcacaacccaaggtgtttacaatgtttctcaacctaagagatcctcactac 31086297  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     |||||||||||||||||||| ||| |||||    
T  31086296 aaagacactcaaccctaaagttacccccttt 31086266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 2 - 333
Target Start/End: Complemental strand, 31077060 - 31076723
Alignment:
Q  2 gaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaag 101  Q
    ||||||| |||||||||| ||||| |||| | ||| ||||  || |||| | |||||| |||  |||||||||||||||| ||||||||||| || ||||    
T  31077060 gaaagaatgaaacaaacataccaagattggtaacctagtttagtccaatatgacctac-tctctaggagatagcagctctccaatccactaagataaaag 31076962  T
Q  102 tgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatt-----tttcaagtcacccacaatctcaatgaa 195  Q
    ||||| |||  |||||  | |||||||||||| || ||| ||||||||| ||||||||| || |||||     ||||||||||||||||||| | |||||    
T  31076961 tgatacaaatgggttacaataaattagcttaagagttcacaaagaacaagacctaatttttatccatttttaatttcaagtcacccacaatcactatgaa 31076862  T
Q  196 tcctaagagaaaatactatttgaa-gttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| ||||    ||  || |||||| ||||||||||||||||||| |||| |||||| ||| || ||||| |||||||    ||  ||||    
T  31076861 tcctaagagaaaacactaaagaaatttttttgatcattccaatggtgaaatctcaatacctaaggtgtttacaaagtttctcaacccaaggcaacgtcac 31076762  T
Q  295 tacgaagacactcaaccctaaagtgacctcctttttatt 333  Q
    ||| |||||||||||||||| ||| | ||||||| ||||    
T  31076761 tacaaagacactcaaccctatagttatctcctttgtatt 31076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 10077285 - 10077026
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| ||||| |||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  10077285 tgaaagaaaggaacaaacacaccaagattgttgacccaattcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaa 10077187  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctca-taaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || ||| | ||||  | ||||||||||| ||||| |  ||||||||| ||||||||||||||||||||    ||||||||||  ||||||||||||    
T  10077186 gtgttacaaaaaagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcacccaca--ctcaatgaatcc 10077091  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtga 262  Q
    ||||| |||| || |   |||| || ||||||||||||||||| |||||||||||||||||||||    
T  10077090 taagataaaacacaaaaggaagctttttgatccttccaatggtcaaatctcactacccaaggtga 10077026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 151 - 328
Target Start/End: Complemental strand, 24435940 - 24435764
Alignment:
Q  151 acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctca 249  Q
    |||||||||||||||||||||  | ||||||||| ||  ||||||||||||||||||| || |   |||| || ||||||||||||||||||||||||||    
T  24435940 acctaatttctacccatttttata-tcacccacattcataatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctca 24435842  T
Q  250 ctacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||||||||||| ||| ||||||||||||| ||  |||| ||||| || |||||||||||||||||||| | |||||||    
T  24435841 ctacccaaggtgtttacaatgtttcccaactcaagagaacctcac-acaaagacactcaaccctaaagttatctccttt 24435764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 5757599 - 5757270
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||||||| |||||||||||| |  ||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||    
T  5757599 tgaaagaaggaa-caaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatga 5757502  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccattt---ttcaagtcacccacaatctcaatg 193  Q
    ||||| || |||||| |||  | ||| ||||||  ||||| ||| |||||||| |||||||||||||||||||   ||| | || | | ||||   ||||    
T  5757501 aagtgttacaaagag-ttacaagaaaatagcttgcaagcttatacaagaacaagacctaatttctacccatttgtgttccactctctctcaat---aatg 5757406  T
Q  194 aatcctaa-gagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctc 292  Q
    || ||||| ||||| | ||     |||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  ||     
T  5757405 aaccctaaagagaagacacggaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatccta 5757306  T
Q  293 actacgaagacactcaaccctaaagtgacctccttt 328  Q
    | ||| |||||||||||||||||||| |||||||||    
T  5757305 aatacaaagacactcaaccctaaagttacctccttt 5757270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 60 - 350
Target Start/End: Complemental strand, 21801406 - 21801113
Alignment:
Q  60 atctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaat 157  Q
    |||||| ||||  ||||||||| ||||||||||| || |||||| || |||   ||||  | |||||| |||| ||||| | ||| |||||| || ||||    
T  21801406 atctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaattatcttataagcttacaaaagaacaagacttaat 21801307  T
Q  158 ttctacccatttttcaagtcacccacaatctcaa-tgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactaccc 255  Q
    |||||||||||||    |||||||||| |||||| |||| |||||||||||| || |   |||| || ||||||||||||||| ||||||||||||||||    
T  21801306 ttctacccattttgt--gtcacccacactctcaaatgaaccctaagagaaaacacaaaaggaagctttttgatccttccaatgttgaaatctcactaccc 21801209  T
Q  256 aaggtgattataatgtttcccaacc--cagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctc 350  Q
    |||||| ||| ||||||||||||||  ||  |||| |||||||| ||||||||||||||| |||| |||| |||| || || |||||||||||||||    
T  21801208 aaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctgctttgta-ttctcaagtttctctctc 21801113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 22709204 - 22709315
Alignment:
Q  217 gaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaa 316  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||| |    
T  22709204 gaagtttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaga 22709303  T
Q  317 gtgacctccttt 328  Q
    ||  ||||||||    
T  22709304 gttccctccttt 22709315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 278
Target Start/End: Original strand, 18232833 - 18233101
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| || ||  ||||| |||| | ||||| |||||| ||||| |||| | || |||| |||||  ||||||||| || |||     
T  18232833 aacaaacacaccaagattgttgactcaaatcggtccaatatgaccta-atctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaa 18232931  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaatcctaagagaa 206  Q
      ||||  | |||| |||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| |||||||   ||||||||||||||    
T  18232932 gagttacaagaaatcagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagagaa 18233029  T
Q  207 aatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaa 278  Q
    || || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  18233030 aacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaa 18233101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 4629930 - 4630211
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaa 99  Q
    |||||||| | |||||||||| |||  |||||| || |||||| || |||| | ||||| |||| | | ||| ||||||||| ||||||||||| |||||    
T  4629930 tgaaagaaaggaacaaacacatcaaagattgttgactcagttcagtccaatatgaccta-atctagggaagagagcagctctccaatccactaagatgaa 4630028  T
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctca-taaagaacaa-acctaatttctacccatttttcaagtcacccacaatctc-aatgaat 196  Q
    |||| || |||   ||||  | |||||| |||| ||||| |  ||||||||| |||||||||||||| |||||    |||||||| | |||| |||||||    
T  4630029 agtgttacaaaatagttacaagaaattaacttataagcttacaaaagaacaagacctaatttctacctatttt--gtgtcacccaaactctcaaatgaat 4630126  T
Q  197 cctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaaccc 281  Q
    |||||||||||| || |   |||| | |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  4630127 cctaagagaaaacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaatgtgtttaaaatgtttcccaaccc 4630211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 5017390 - 5017298
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||||||||||||    
T  5017390 gatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagt 5017298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 1115159 - 1115017
Alignment:
Q  67 ggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctaccc 165  Q
    ||||| ||||| ||| ||||||||||  || | | ||||| ||| ||||||  | |||| | |||||||||||| ||| |||||||| ||||||||| ||    
T  1115159 ggagagagcagatctccaatccactatgataagaatgatacaaataggttacaagaaatcaacttaaaagctcaaaaataacaaaccctaatttctatcc 1115060  T
Q  166 atttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    ||||||||||||||||||| || ||||||||  ||||||||||    
T  1115059 atttttcaagtcacccacactcacaatgaatattaagagaaaa 1115017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 30518150 - 30517998
Alignment:
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacct-aatttctacccatttttcaagtcacccacaatctcaa-tgaatc 197  Q
    ||||||| ||||||||||    ||| || |||||||| ||| ||||||||||||| |||||||||| ||||||||||| ||||||| || ||| ||||||    
T  30518150 agtgatacaaagaggttacatgaaactaacttaaaagttcacaaagaacaaaccttaatttctacctatttttcaagttacccacactcacaaatgaatc 30518051  T
Q  198 ctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcact 251  Q
     || ||||||| ||||   |||||| ||||||||||||||  ||||||||||||    
T  30518050 tta-gagaaaacactaaaggaagtttttgatccttccaataatgaaatctcact 30517998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21356012 - 21356114
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    ||||||||| ||||||||||||||| |  ||||| |||||||||||| |||| | ||||| |||||||||||| ||||||||| ||||||||||  ||||    
T  21356012 tgaaagaag-aaacaaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctggaggagagagcagctctccaatccactatgatga 21356109  T
Q  99 aagtg 103  Q
    |||||    
T  21356110 aagtg 21356114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 21356238 - 21356318
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagaca 304  Q
    ||||| ||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||  |||  |||||||| ||||||    
T  21356238 ttgattcttccaatgatgaaatctcactacccaaggtgtttacaatgtttcctaacccaagagatcctcactacaaagaca 21356318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 5674660 - 5674570
Alignment:
Q  226 gatccttccaatggtgaaatc-tcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  5674660 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 5674570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 99253 - 99342
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaacct-aatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatac 211  Q
    ||||||||||| ||||||| | ||||||||| | ||||||||||||||||| |||| || |||| || |||||||||||| ||||||||||    
T  99253 aaattagcttagaagctcacagagaacaaactttaatttctacccattttt-aagttactcacactcacaatgaatcctatgagaaaatac 99342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 5385799 - 5385881
Alignment:
Q  227 atccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaac 310  Q
    ||||||| |||||||||||||||||||  |||||||||  ||||||||  |||||| | ||| |||||||| ||||||||||||    
T  5385799 atccttctaatggtgaaatctcactacttaaggtgattgcaatgtttcttaaccca-atgaacctcactacaaagacactcaac 5385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 33721573 - 33721466
Alignment:
Q  108 aaagaggttatgaaaaattagcttaaaagctcataaagaac-aaacctaatttctacccatttttcaagtcacccacaat-ctcaatgaatcctaagaga 205  Q
    ||||||||||  | ||||||| |||||| |||||||||||| |||||||||||   ||||||||| | ||||| |||| | || ||||||||||||||||    
T  33721573 aaagaggttacaagaaattagtttaaaaactcataaagaacaaaacctaattttcccccattttttaggtcacacacactcctaaatgaatcctaagaga 33721474  T
Q  206 aaatacta 213  Q
    ||| ||||    
T  33721473 aaacacta 33721466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 21272842 - 21272781
Alignment:
Q  267 aatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||||||| |||||||  |||| |||||||| |||||||||||||||||||| ||| |||||    
T  21272842 aatgtttcgcaacccaagagaacctcactacaaagacactcaaccctaaagttacccccttt 21272781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 22424931 - 22424983
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttttc 172  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||||    
T  22424931 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttttc 22424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 2973057 - 2973093
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  2973057 aagctcacaaagaacaaacctaatttctacccatttt 2973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 28137512 - 28137562
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  28137512 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttt 28137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 10077021 - 10076983
Alignment:
Q  290 ctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  10077021 ctcactacaaagacactcaaccctaaagttacctccttt 10076983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5017589 - 5017545
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggt 45  Q
    |||||||| | |||||||||||||| |||||| ||||||||||||    
T  5017589 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggt 5017545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 5043677 - 5043641
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  5043677 aagctcacaaagaacaaacctaatttctactcatttt 5043641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 16569098 - 16569047
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaa-cctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||||| |||||||||||||||||||    
T  16569098 aaattagcttaaacaagctcacaaagaacaaaacctaatttctacccatttt 16569047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 17758073 - 17758037
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  17758073 aagctcacaaagaacaaccctaatttctacccatttt 17758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 17763040 - 17763004
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  17763040 aagctcacaaagaacaaccctaatttctacccatttt 17763004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 21588981 - 21588945
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  21588981 aagctcacaaagaacaaccctaatttctacccatttt 21588945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 21593714 - 21593678
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  21593714 aagctcacaaagaacaaccctaatttctacccatttt 21593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 7e-57; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 21711200 - 21711527
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||||||  |||||||||  ||||||    
T  21711200 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctcaaatccactatgatgaaa 21711298  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctc---aatgaa 195  Q
    ||| || ||||| ||||  | ||||||||||||||||| | | |||| ||| ||||||||||||||||||| |   || ||||||| ||||   ||||||    
T  21711299 gtgttacaaaga-gttacaagaaattagcttaaaagcttacacaagagcaagacctaatttctacccatttgt---gttacccacactctcaataatgaa 21711394  T
Q  196 tcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    ||||||||||||| || |   |||| | |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||  |||  ||||||    
T  21711395 tcctaagagaaaacacaaaaggaagcttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaagagatcctcact 21711494  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||||||||||||||||| |||||||||    
T  21711495 acaaagacactcaaccctaaagttacctccttt 21711527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 3328455 - 3328138
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||  | |||| | ||||| |||| ||||||| |||||| |||||||||||||| ||||||||| || || |    
T  3328455 aacaaacacaccaagattgttgacccagttcattccaatatgaccta-atctagaggagagagcagcccttcaatccactaagatgaaagtgttacaatg 3328357  T
Q  112 aggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
    || |||  | ||||||||||| ||||| | ||| ||||||  ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||     
T  3328356 ag-ttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgtatcctaagagaaaac 3328258  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    || |   |||| || ||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||  |||| |||||||| |||||| |||    
T  3328257 acaaaaggaagttttttgatccttccaatgctgaaatctcactacccaaggtgtttacaatgttttccaacccaagagaagctcactacaaagacattca 3328158  T
Q  309 accctaaagtgacctccttt 328  Q
    |||||||||| | |||||||    
T  3328157 accctaaagttatctccttt 3328138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 1736415 - 1736063
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | ||||||||||||||||||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  1736415 tgaaagaaaggaacaaacacaccaatattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaa 1736317  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||   ||||  | |||||| |||| ||||| | | |||||||| ||||||||||||||||||||    |||||| ||| |||||||   |||    
T  1736316 gtgttacaaaagagttacaagaaattaacttataagcttacacaagaacaagacctaatttctacccattttgt--gtcaccaacactctcaataatgaa 1736219  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||    
T  1736218 tcctaagagaaaacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaatagatcctcac 1736119  T
Q  295 tacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctc 352  Q
    ||| |||||||||||||||||||| ||||||||| ||   | ||||||||||||||||    
T  1736118 tacaaagacactcaaccctaaagttacctcctttgta--atccaagtttctctctctc 1736063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 8370598 - 8370270
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | |||||||||||||| |  ||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||    
T  8370598 tgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatga 8370500  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--ga 194  Q
    ||||| || |||||| |||  | ||||||||||||||||| | | |||||||| || |||||||||||||||| |   |||||||||  || ||||  ||    
T  8370499 aagtgttacaaagag-ttacaagaaattagcttaaaagcttacacaagaacaagacataatttctacccatttgt---gtcacccactctcacaatatga 8370404  T
Q  195 atcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    |||||||||||||| || |   |||  | ||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||  |||  |||||    
T  8370403 atcctaagagaaaacacaaaaggaaacttttgatccttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatcctcac 8370304  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| |||||||||||||||||||| |||||||||    
T  8370303 tacaaagacactcaaccctaaagttacctccttt 8370270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 1417589 - 1417272
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||| | || ||||||||||| | ||||||| || || |    
T  1417589 aacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcatccctccaatccactaagaagaaagtgttacaatg 1417491  T
Q  112 aggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
    || |||| | ||||||||||| || || | ||| ||||||  ||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||     
T  1417490 ag-ttataagaaattagcttataaacttacaaaagaacaagtcctaatttctacccatttttcatatcacccacactcccaatgaatcctaagagaaaac 1417392  T
Q  210 ac-tatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    ||  |    || || ||||||||| ||||||||||||||||||||| || ||| ||| ||||||||||||||||  | || |||||||| ||||||||||    
T  1417391 acaaaagaaaactttttgatcctttcaatggtgaaatctcactacctaaagtgtttacaatgtttcccaacccaagataacctcactacaaagacactca 1417292  T
Q  309 accctaaagtgacctccttt 328  Q
    |||||||||| |||||||||    
T  1417291 accctaaagttacctccttt 1417272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 12 - 377
Target Start/End: Original strand, 25795768 - 25796133
Alignment:
Q  12 aacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatat-aa 109  Q
    ||||||||||||||  |||||| ||| |||||||| |||| | ||||| |||||| ||||| ||||||||| ||||| ||||| ||||||||| ||  ||    
T  25795768 aacaaacacaccaaagattgttgacctagttcggtccaatatgaccta-atctgggggagagagcagctctccaatctactaagatgaaagtgttacgaa 25795866  T
Q  110 agaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaa 207  Q
    |||| |||  | ||||||||||| ||||| | ||| |||||| ||||||||||||||||||||    |||||||||| ||||||||||||||||||||||    
T  25795867 agag-ttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcctaagagaaa 25795963  T
Q  208 atactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagaca 304  Q
    | |  |   |||| || |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||  ||  |||  |||||||| ||||||    
T  25795964 acataaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacattgtttcccaaccctcaagagagcctcactacaaagaca 25796063  T
Q  305 ctcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaa 377  Q
    ||||||||| |||| ||||||||| || ||  ||||||  |||||||| ||||||||||||||| ||||||||    
T  25796064 ctcaaccctcaagttacctcctttgta-ttcccaagtt--tctctctcaaagccacacacaaaaaatgaagaa 25796133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 18552993 - 18552716
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||| ||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  18552993 tgaaagaaaggaacaaatacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaa 18552895  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || |||   ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| |||||||||||||    
T  18552894 gtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcc 18552797  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaa 278  Q
    |||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  18552796 taagagaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaa 18552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 26298976 - 26299293
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||||||||||||||||| | || || |||||| ||||| |||||| || ||||| ||||  ||||||||| || |||     
T  26298976 aacaaacacaccaagattgttgacccagttcggttcaatatgacata-atctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaa 26299074  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
      ||||  | ||||||||||| || || | | |||||||| ||||||||||||||||||||    |||||||||||||||||| |||||||||||||||     
T  26299075 gagttacaagaaattagcttataaacttagacaagaacaagacctaatttctacccattttgt--gtcacccacaatctcaattaatcctaagagaaaac 26299172  T
Q  210 actatttg-aag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactc 307  Q
    || |   | ||| || |||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||||| ||    
T  26299173 acaaaaaggaagctttttgataattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacattc 26299272  T
Q  308 aaccctaaagtgacctccttt 328  Q
    ||||||||||| |||||||||    
T  26299273 aaccctaaagttacctccttt 26299293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 40592881 - 40592563
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||  ||||| || |||||| ||||| ||||  ||||||||| || |||     
T  40592881 aacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaa 40592783  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaaac-ctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaa 207  Q
      ||||  | ||||||||||| ||||| | | |||||||||  ||||||||||||||||||    |||||||||  || ||||  |||||||||||||||    
T  40592782 gagttacaagaaattagcttacaagcttacacaagaacaaaatctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaagagaaa 40592685  T
Q  208 atactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacact 306  Q
    | || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||    
T  40592684 acacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 40592585  T
Q  307 caaccctaaagtgacctccttt 328  Q
    |||||||||||| |||||||||    
T  40592584 caaccctaaagttacctccttt 40592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 36029070 - 36029398
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||| | |||||| ||||||||| || |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||    
T  36029070 tgaaagaaaggaacaaacacaccgagattgttgacccagttctgtccaatatgaccta-atctgggggagaaagcagctctccaatccactatgatgaaa 36029168  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaa----tga 194  Q
    ||| || |||   ||||  | ||||||||||| || || | | |||||||| ||||||||||||||||||||    ||||| |||  ||||||    |||    
T  36029169 gtgttacaaaagagttacaagaaattagcttacaaacttacacaagaacaagacctaatttctacccattttgt--gtcactcac--tctcaaaatatga 36029264  T
Q  195 atcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    |||||||||||||| || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||    
T  36029265 atcctaagagaaaacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcac 36029364  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| |||||||||||||||||| | |||||||||    
T  36029365 tacaaagacactcaaccctaaatttacctccttt 36029398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 83 - 328
Target Start/End: Complemental strand, 3323719 - 3323472
Alignment:
Q  83 caatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaaacc-taatttctacccatttttcaagtcacc 180  Q
    ||||||||||| ||||||||| || || ||| |||  | ||||||||||| ||||| | ||| ||||||  | ||||||||||||||| ||||  |||||    
T  3323719 caatccactaagatgaaagtgttacaatgag-ttacaagaaattagcttataagcttacaaaagaacaagtcataatttctacccattgttcatatcacc 3323621  T
Q  181 cacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaac 279  Q
    |||| ||||||||||| ||||||||||| || |   |||| || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3323620 cacactctcaatgaattctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaac 3323521  T
Q  280 ccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||  |||| |||||||  |||||||||||||||||||| |||||||||    
T  3323520 ccaagagaacctcactataaagacactcaaccctaaagttacctccttt 3323472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 47924005 - 47923685
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||| | |||| | ||||| |||| | ||||| |||||| |||||||| ||||  ||||||||| || |||     
T  47924005 aacaaacacaccaagattgttgacccagttcgatccaatatgaccta-atctaggggagagagcagcccttcaatctactatgatgaaagtgctacaaaa 47923907  T
Q  112 aggttatgaaaaattagcttaaaagct--cataaagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaat---gaatcctaagaga 205  Q
      ||||  | ||||||||||||||| |  || ||||| |||| |||||||| ||||||||||    |||| ||||| |||||||   |||||||| ||||    
T  47923906 gagttacaagaaattagcttaaaagtttacacaaagagcaaaacctaatttatacccattttgt--gtcatccacactctcaataatgaatcctacgaga 47923809  T
Q  206 aaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagaca 304  Q
    ||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  ||| ||||||||| ||||||    
T  47923808 aaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagattctcactacaaagaca 47923709  T
Q  305 ctcaaccctaaagtgacctccttt 328  Q
    ||||| |||||||| |||||||||    
T  47923708 ctcaatcctaaagttacctccttt 47923685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 48438202 - 48438520
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| ||| || ||| |||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||||| || |||     
T  48438202 aacaaacacaccaagattattgacctagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 48438300  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaatcctaagagaa 206  Q
      ||||  | |||||||| || ||||| | | |||||||| ||||||||||||||||||||    |||||||||| |||||||   ||||||||||||||    
T  48438301 gagttacaagaaattagcatataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagagaa 48438398  T
Q  207 aatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacac 305  Q
    || || |   |||| || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||| || |||  || ||||| |||||||    
T  48438399 aacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccaag-agatccttactacaaagacac 48438497  T
Q  306 tcaaccctaaagtgacctccttt 328  Q
    ||||||||||||| |||||||||    
T  48438498 tcaaccctaaagttacctccttt 48438520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 6794823 - 6794496
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||| ||| ||| |||| | ||||| || ||| ||||| ||||||||| ||||||||||  ||||||    
T  6794823 tgaaagaaaggaacaaacacaccaagattgttgacccggttaggtccaatatgaccta-atatgggggagagagcagctctccaatccactatgatgaaa 6794725  T
Q  101 gtgatataaagaggttatga-aaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaat--gaa 195  Q
    ||| || |||||| |||  | |||||||||||  ||||| | | ||||||||  |||||||||||||||||| |   |||||||||  || ||||  |||    
T  6794724 gtgttacaaagag-ttacaagaaaattagcttgcaagcttacacaagaacaagtcctaatttctacccatttgt---gtcacccactctcacaatatgaa 6794629  T
Q  196 tcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
     ||||||||||||||| |   |||| | ||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||  |||| ||||||    
T  6794628 ccctaagagaaaatacaaaaggaagcttttgttcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagaacctcact 6794529  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || | |||||||||||||||||| |||||||||    
T  6794528 acaatgacactcaaccctaaagttacctccttt 6794496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 142 - 328
Target Start/End: Complemental strand, 24695133 - 24694947
Alignment:
Q  142 aaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatgg 239  Q
    ||||||||| ||||||||||||||||||||    |||||||||| |||||||||||||||| |||||| || |   |||| || |||||| |||||||||    
T  24695133 aaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcctaaaagaaaacacaaaaggaagctttttgatcattccaatgg 24695036  T
Q  240 tgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||| |||||||||    
T  24695035 tgaaatctcaccacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctccttt 24694947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 12 - 350
Target Start/End: Complemental strand, 3716101 - 3715760
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | ||||| |||| |  |||| ||||||||| ||||| ||||  ||||||||| || |||     
T  3716101 aacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaa 3716003  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaa 207  Q
      ||||  | ||||||||||| || || | | |||||||| || |||||||||||||||||    |||||||||  || ||||  |||||||||||||||    
T  3716002 gagttacaagaaattagcttacaaacttacacaagaacaagacttaatttctacccattttgt--gtcacccactttcacaatatgaatcctaagagaaa 3715905  T
Q  208 atactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagaca 304  Q
    | || |    ||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||  |||| |||||||| ||||||    
T  3715904 acacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagaca 3715805  T
Q  305 ctcaaccctaaagtgacctcctttttatttttcaagtttctctctc 350  Q
     ||||||||||||| ||||||||| || || |||||||||||||||    
T  3715804 ttcaaccctaaagttacctcctttgta-ttctcaagtttctctctc 3715760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 240 - 387
Target Start/End: Complemental strand, 4386846 - 4386702
Alignment:
Q  240 tgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaa 339  Q
    |||||||||||||| ||||||||||| ||||||||||||||||  |||| |||||||| |||||||||||||||||||| ||||||||| || |||||||    
T  4386846 tgaaatctcactactcaaggtgattacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgta-ttttcaa 4386748  T
Q  340 gtttctctctctctaagccacacacaaaacatgaagaataaaacctta 387  Q
    |||  |||||||||||| |||||||||| |||||||||| || |||||    
T  4386747 gtt--tctctctctaagacacacacaaatcatgaagaatgaagcctta 4386702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 149 - 318
Target Start/End: Original strand, 35925605 - 35925773
Alignment:
Q  149 aaacctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatc 246  Q
    ||||||||||||||||||||| |   |||||||||  || ||||  |||||||||||||||| || |   |||| | |||||||||||||||||||||||    
T  35925605 aaacctaatttctacccatttgt---gtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagcttttgatccttccaatggtgaaatc 35925701  T
Q  247 tcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
    ||||||||||||||| ||| |||||||||||||||| ||||  |||||||| |||||| |||||||||||||    
T  35925702 tcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacattcaaccctaaagt 35925773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 4387038 - 4386843
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaa 99  Q
    |||||||| | |||||||||| |||  |||||||||||||||  ||||| | | |||||| ||||| ||||| ||||||||| ||||||| ||| || ||    
T  4387038 tgaaagaaaggaacaaacacatcaaagattgtttacccagtttagttcagtatgacctac-tctgggggagagagcagctctccaatccaataagataaa 4386940  T
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaac-aaacctaatttctacccatttttcaagtcacccacaatctcaatgaa 195  Q
    ||||||| |||  |||||  | ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||    
T  4386939 agtgatacaaatgggttacaagaaattagcttaaaagctcacaaagaacaaaacctaatttctactcatttttcaagtcacccacactctcgatgaa 4386843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 122 - 310
Target Start/End: Original strand, 8126727 - 8126917
Alignment:
Q  122 aaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaa 219  Q
    ||||||||||| ||||| | ||| |||||| || ||||||||||||||||||   |||||||||| |||||||||||| |||||||||| || |   |||    
T  8126727 aaattagcttataagcttacaaaagaacaatacttaatttctacccatttttgt-gtcacccacactctcaatgaatcttaagagaaaacacaaaaagaa 8126825  T
Q  220 g-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaac 310  Q
    | || ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||  | || |||||||| ||||||||||||    
T  8126826 gctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagaaaacctcactacaaagacactcaac 8126917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 16264325 - 16264654
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | ||||||||||| || |  ||||| ||| |||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||    
T  16264325 tgaaagaaaggaacaaacacacaaaaagattgttgacctagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatga 16264423  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatga-- 194  Q
    ||||| || |||||| |||  | ||| ||||||  |||||   | |||||||| ||||||||||||| ||||| |   || ||||||  |||||||||      
T  16264424 aagtgttacaaagag-ttacaagaaaatagcttgcaagcttccacaagaacaagacctaatttctacacatttgt---gttacccactctctcaatgatg 16264519  T
Q  195 -atcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctca 293  Q
     | |||||||||| | || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  ||||    
T  16264520 aaccctaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctca 16264619  T
Q  294 ctacgaagacactcaaccctaaagtgacctccttt 328  Q
     ||| |||||||||||||||||||| |||||||||    
T  16264620 ttacaaagacactcaaccctaaagttacctccttt 16264654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 37466279 - 37466600
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| || ||||||||| |||| | ||||| |||||| ||||| || ||| || ||||||||||| ||||||||| || || |    
T  37466279 aacaaacacaccaagattgttgacacagttcggtccaatatgaccta-atctgggggagagagtagccctccaatccactaagatgaaagtgttacaatg 37466377  T
Q  112 aggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttctacccatttttca----agtcacccacaatctcaatgaatcctaagaga 205  Q
    || |||  | ||||||  ||| ||||| | ||| ||||||  ||||||||||||||||||||||    | |||||| || |||||||||||||||| | |    
T  37466378 ag-ttacaagaaattaatttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcactcacccgcactctcaatgaatcctaaaata 37466476  T
Q  206 aaatactatttgaagttatt-gatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagaca 304  Q
    ||| || |   |||| | || |||| |||||||||||||||||||| |||||| ||| ||| |||||||||||||| |  |||| |||||||| ||||||    
T  37466477 aaacacaaaaggaagcttttcgatctttccaatggtgaaatctcacaacccaaagtgtttacaatgtttcccaacctaagagaacctcactacaaagaca 37466576  T
Q  305 ctcaaccctaaagtgacctccttt 328  Q
    |||| | ||||||| |||||||||    
T  37466577 ctcagctctaaagttacctccttt 37466600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 61 - 333
Target Start/End: Original strand, 21353598 - 21353877
Alignment:
Q  61 tctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaaca-aacctaattt 159  Q
    |||| |||||| |||| |||| ||||||||||| |||||||||||| |||   ||||  | ||||||||  || |||||| |||||||| ||||||||||    
T  21353598 tctgaaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcacaagagctcacaaagaacacaacctaattt 21353697  T
Q  160 ctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttg-aagttattgatccttccaatggtga-aatctcactacccaa 257  Q
    |||||||||||||| | ||| |||| |  ||||||||| |||||||||| ||||   | || || | ||||||||||||||||| | |||||||||||||    
T  21353698 ctacccatttttcatgccactcacacttacaatgaatcttaagagaaaacactaaaggaaacttttggatccttccaatggtgacattctcactacccaa 21353797  T
Q  258 ggtgattataatgtttcccaacc--cagaagaatctcactacgaagacactc--aaccctaaagtgacctcctttttatt 333  Q
     ||| |||  |||||||||||||  ||  |||| |||||||| |||||||||  ||||||||||| ||||||||| ||||    
T  21353798 agtgtttacgatgtttcccaaccctcaagagaacctcactacaaagacactcaaaaccctaaagttacctcctttgtatt 21353877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 27975063 - 27974733
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||||||| |||||||||||| |  ||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||    
T  27975063 tgaaagaaggaa-caaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatga 27974966  T
Q  99 aagtgatataaagaggtt-atgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--- 192  Q
    ||||| || |||||| |  | ||||||| |||||  ||||| | | |||||||| ||||||||||||||||||| |   ||  ||||   |||||||       
T  27974965 aagtgttacaaagagttacaagaaaaat-agcttgcaagcttacacaagaacaagacctaatttctacccatttgt---gtttcccattctctcaataat 27974870  T
Q  193 gaatcctaa-gagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatct 291  Q
    ||| ||||| ||||| | || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||  |||  ||    
T  27974869 gaaccctaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccgacccaagagatcct 27974770  T
Q  292 cactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||||| |||||||||||||||||||| |||||||||    
T  27974769 cactacaaagacactcaaccctaaagttacctccttt 27974733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 16 - 328
Target Start/End: Original strand, 40844644 - 40844960
Alignment:
Q  16 aacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggt 115  Q
    |||||||||| |||||| |  ||||||||| |||| | ||||| |||||| ||||| |||||| ||  |||||||||  ||||||||| || |||   ||    
T  40844644 aacacaccaagattgttgattcagttcggtccaatatgaccta-atctgg-ggagagagcagccctcaaatccactatgatgaaagtgttacaaaagagt 40844741  T
Q  116 tatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatacta 213  Q
    ||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| ||||||||||||||||||||||| || |    
T  40844742 tacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcctaagagaaaacacaa 40844839  T
Q  214 tttgaag-ttattgatccttccaat-----ggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactc 307  Q
       |||| || ||||||||||||||     ||| |||||||| ||| ||||||| ||| |||||||| |||||||  |||  |||||||| |||||||||    
T  40844840 aaggaagctttttgatccttccaatggtcaggtcaaatctcattactcaaggtgtttacaatgtttctcaacccaatagatcctcactacaaagacactc 40844939  T
Q  308 aaccctaaagtgacctccttt 328  Q
    ||||||||||| |||||||||    
T  40844940 aaccctaaagttacctccttt 40844960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 27986341 - 27986237
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||||||||||||  |||    
T  27986341 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccct 27986242  T
Q  324 ccttt 328  Q
    |||||    
T  27986241 ccttt 27986237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 39032439 - 39032336
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  || |||||||||| |||||||||||||||||||| ||||    
T  39032439 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttaccaacccaagag-atctcactacaaagacactcaaccctaaagttacct 39032341  T
Q  324 ccttt 328  Q
    |||||    
T  39032340 ccttt 39032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 142 - 328
Target Start/End: Complemental strand, 25929365 - 25929177
Alignment:
Q  142 aaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactattt--gaag-ttattgatccttccaat 237  Q
    ||||||||| ||||| ||||||| |||||| || |||||||||| || |||||||||||||||||||| || |     |||| || ||||||||||| ||    
T  25929365 aaagaacaagacctagtttctactcatttt-catgtcacccacactcacaatgaatcctaagagaaaacacaaaaaaagaagctttttgatccttccgat 25929267  T
Q  238 ggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||||||||||||| || ||| ||||||| ||||| ||  |||| |||||||| |||||||||||||||||||| |||||||||    
T  25929266 ggtgaaatctcactacccaag-tgtttacaatgttttccaactcaagagaacctcactacaaagacactcaaccctaaagttacctccttt 25929177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 33386560 - 33386466
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||  |||  |||||||| ||||||||||||||||||||    
T  33386560 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagacactcaaccctaaagt 33386466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 29100151 - 29100350
Alignment:
Q  16 aacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaa-agtgatataaagagg 114  Q
    |||||||||||||||||||||||||||||| |||  | ||| || | | | | ||| ||||||||| || |||||||  || || ||||||| |||||||    
T  29100151 aacacaccaatattgtttacccagttcggtccaaaattacccac-tatagggaagagagcagctctccattccactatgataaagagtgatacaaagagg 29100249  T
Q  115 ttatgaaaaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcacccacaatc-tcaatgaatcctaagagaaaatact 212  Q
    |||| | |||||||||||||| |||| |||||||||| |||||||||||| | |||||||||||||| ||| || | |||||||| ||||||| ||||||    
T  29100250 ttataagaaattagcttaaaaactcacaaagaacaaaccctaatttctactcgtttttcaagtcacctacactcataaatgaatcataagagataatact 29100349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 37725876 - 37725980
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||  |||  |||||||| ||||||||||||||||||||  |||    
T  37725876 ttgatcctttcaatggtgaaatctcactatccaaggtgtttataatgtttccccacccaagagatcctcactacaaagacactcaaccctaaagtttcct 37725975  T
Q  324 ccttt 328  Q
    |||||    
T  37725976 ccttt 37725980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 47649688 - 47649882
Alignment:
Q  143 aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaaatactatttgaag-ttattgatccttccaatg 238  Q
    |||||||| ||||||||||||||||||||    |||||||||  || ||||  |||||||||||||||| || |   |||| || |||||||||| ||||    
T  47649688 aagaacaagacctaatttctacccattttgt--gtcacccactctcgcaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttcaaatg 47649785  T
Q  239 gtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatt 333  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| |||||||| |||||||||||||||||||| | ||||||| ||||    
T  47649786 gtgaaatctaactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttatctcctttgtatt 47649882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 26928484 - 26928394
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaacccta 314  Q
    |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||||||||    
T  26928484 ttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaacccta 26928394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 30709902 - 30709611
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | |||||||||||||| |  ||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||    
T  30709902 tgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatga 30709804  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---g 193  Q
    || || || |||   ||||  | ||||||||||| ||||| | | |||| ||| ||||||||||||||||| ||    |||||||||| |||||||   |    
T  30709803 aattgttacaaaagagttacaagaaattagcttataagcttacacaagagcaagacctaatttctacccatcttgt--gtcacccacactctcaataatg 30709706  T
Q  194 aatcctaagagaaaatactatttgaagtta-ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaaga 287  Q
    ||||||||||||||| || |   |||| || |||||| |||||||| |||||||||||| ||||||||| ||| |||||||||||||||| ||||    
T  30709705 aatcctaagagaaaacacaaaaggaagctatttgatcattccaatgatgaaatctcactccccaaggtgtttacaatgtttcccaacccaaaaga 30709611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 27453161 - 27453263
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  |||  ||||||||  |||||||||||||||||||  |||    
T  27453161 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactac--agacactcaaccctaaagttccct 27453258  T
Q  324 ccttt 328  Q
    |||||    
T  27453259 ccttt 27453263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 32143524 - 32143628
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  |||   ||||||| |||||||||||||||| |||  |||    
T  32143524 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcatcactacaaagacactcaaccctagagttccct 32143623  T
Q  324 ccttt 328  Q
    |||||    
T  32143624 ccttt 32143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 1306153 - 1306257
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||  |||  |||||||| |||||||||||| ||| |||  |||    
T  1306153 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaactctagagttccct 1306252  T
Q  324 ccttt 328  Q
    |||||    
T  1306253 ccttt 1306257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 25517069 - 25517159
Alignment:
Q  112 aggttatgaaaaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaa 201  Q
    ||||||| | ||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| || || |||| |||||    
T  25517069 aggttataagaaattagcttaaaagctcacaaagaacaaaccctaatttctacttatttttcaagtcacccacactcacagtgaaccctaa 25517159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 27026925 - 27027011
Alignment:
Q  242 aaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||||||||||||||||||| ||| |||||||||| | |||  |||  |||| ||| |||||||||||||||||||| |||||||||    
T  27026925 aaatctcactacccaaggtgtttacaatgtttccctatccaagagatcctcagtacaaagacactcaaccctaaagttacctccttt 27027011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 23392106 - 23392170
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaa 316  Q
    |||||||||| ||| ||||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  23392106 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaa 23392170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 5366351 - 5366221
Alignment:
Q  85 atccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcacccac 183  Q
    ||||||||  |||||||||||| ||||||||||  | |||||| ||||||| |||| || ||| ||| | |||||||||||| |||||| ||||||||||    
T  5366351 atccactatgatgaaagtgatacaaagaggttacaagaaattatcttaaaatctcacaatgaaaaaatcttaatttctacccttttttctagtcacccac 5366252  T
Q  184 aat-ctcaatgaatcctaagagaaaatacta 213  Q
    | |  | ||||||||||||| ||||| ||||    
T  5366251 actaataaatgaatcctaagcgaaaacacta 5366221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 27038270 - 27038356
Alignment:
Q  242 aaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||| |||||||||| ||| |||||||||| |||||  |||  |||||||| ||| |||||||||||||||| | |||||||    
T  27038270 aaatctcaccacccaaggtgtttacaatgtttccctacccaagagatcctcactacaaaggcactcaaccctaaagttatctccttt 27038356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 22835106 - 22835156
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  22835106 aaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttt 22835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 23410529 - 23410592
Alignment:
Q  255 caaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
    ||||||| ||| ||||||| ||||||||  |||| |||||||| ||||||||||||||||||||    
T  23410529 caaggtgtttacaatgttttccaacccaagagaacctcactacaaagacactcaaccctaaagt 23410592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 9581346 - 9581297
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccattt 169  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  9581346 aaattagcttaaacaagctcacaaagaacaaacctaatttctacccattt 9581297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 26386599 - 26386635
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  26386599 aagctcacaaagaacaaacctaatttctacccatttt 26386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 46860524 - 46860488
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  46860524 aagctcacaaagaacaaacctaatttctacccatttt 46860488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 760911 - 760861
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||| ||||||||||||||||||||    
T  760911 aaattagcttaaacaagctcacaaagaacagacctaatttctacccatttt 760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 528
Target Start/End: Complemental strand, 28074166 - 28074099
Alignment:
Q  461 tacaatacttgaacttatctcctgcatcgtgttatgttgcctctgcattgtgccacgatttttccagt 528  Q
    |||||||||||| ||||||||||||||||||  | ||| |  ||| || |||||||||||||||||||    
T  28074166 tacaatacttgatcttatctcctgcatcgtgccacgttcctcctggatcgtgccacgatttttccagt 28074099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 29682423 - 29682373
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||||||||    
T  29682423 aaattagcttaaacaagctcacaaagaacaaacataatttctacccatttt 29682373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 39153465 - 39153515
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| || ||||||||||||||||||||||||||    
T  39153465 aaattagcttaaacaagctcacaatgaacaaacctaatttctacccatttt 39153515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 391
Target Start/End: Original strand, 2075349 - 2075403
Alignment:
Q  337 caagtttctctctctctaagccacacacaaaacatgaagaataaaaccttatata 391  Q
    |||||||||||||||  ||||| ||| ||||||||||||||| || |||||||||    
T  2075349 caagtttctctctcttgaagcctcactcaaaacatgaagaatgaagccttatata 2075403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 2671455 - 2671386
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  2671455 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 2671386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 8477592 - 8477661
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  8477592 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 8477661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 9091170 - 9091101
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  9091170 ctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccct 9091101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 40372665 - 40372596
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  40372665 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 40372596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 53921621 - 53921659
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  53921621 aagctcacaaacaacaaacctaatttctacccatttttc 53921659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 8738932 - 8738864
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccc 312  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| ||||||||||||||    
T  8738932 ctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccc 8738864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 41163258 - 41163177
Alignment:
Q  100 agtgatataaagaggttatgaaaaattagctt-aaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcac 179  Q
    ||||||| |||||||||   ||||||||| |  |||||||||||||||||||| ||||||||| ||||| || |||||||||    
T  41163258 agtgatacaaagaggttccaaaaaattagatccaaaagctcataaagaacaaaccctaatttcgacccagttatcaagtcac 41163177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 5373148 - 5373097
Alignment:
Q  299 aagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    ||||| ||||||| |||||| |||||||||  |||||||||||||||||||||    
T  5373148 aagactctcaaccttaaagttacctcctttg-atttttcaagtttctctctct 5373097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 22764325 - 22764389
Alignment:
Q  28 ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccacta 92  Q
    ||||| ||||||||||| ||||| |||||||||||| | ||||| || || ||| ||||||||||    
T  22764325 ttgttaacccagttcggctcaatataacctacatctaggggagacagtagttctccaatccacta 22764389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 30236175 - 30236139
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  30236175 aagctcacaaagaacaaccctaatttctacccatttt 30236139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 32744540 - 32744590
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccattttt 171  Q
    |||||||||||||  |||||| ||||||||||| ||||||||||||||||||    
T  32744540 aaattagcttaaacaagctcacaaagaacaaac-taatttctacccattttt 32744590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 34491262 - 34491226
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  34491262 aagctcacaaagaacaaccctaatttctacccatttt 34491226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 40734548 - 40734512
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  40734548 aagctcacaaagaacaaccctaatttctacccatttt 40734512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 40735433 - 40735397
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  40735433 aagctcacaaagaacaaccctaatttctacccatttt 40735397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 43401920 - 43401956
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  43401920 aagctcacaaagaacaaccctaatttctacccatttt 43401956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 43403863 - 43403899
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  43403863 aagctcacaaagaacaagcctaatttctacccatttt 43403899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 7e-57; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 3 - 328
Target Start/End: Complemental strand, 47098942 - 47098617
Alignment:
Q  3 aaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagt 102  Q
    |||||| | |||||||||||||| |||||| |||||||||||| |||| | ||| | |||||| ||||| |||||| || ||||||||||| ||||||||    
T  47098942 aaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccga-atctgggggagagagcagccctccaatccactaagatgaaagt 47098844  T
Q  103 gatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatccta 200  Q
    | || || ||| |||  | ||||||||||| ||||| | ||| ||||||  ||||||||||||||||||| ||  ||||||||| |||||||||| ||||    
T  47098843 gttacaatgag-ttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttt-cacatcacccacactctcaatgaaaccta 47098746  T
Q  201 agagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacga 299  Q
    ||| |||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||| ||| |||| |    
T  47098745 agaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcgctacaa 47098646  T
Q  300 agacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||||||||||| |||||||||    
T  47098645 agacactcaaccctaaagttacctccttt 47098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 32889427 - 32889743
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| | | |||||||| |||| | |||||  ||||| ||| | ||||||||| ||||||||||| ||||||||| || || |    
T  32889427 aacaaacacaccaagattgttgatctagttcggtccaatatgacctag-tctgggggatagagcagctctccaatccactaagatgaaagtgttacaatg 32889525  T
Q  112 aggtt-atgaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    || |  | ||||||| |||||  ||||| | | ||||||||  ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  32889526 agttacaagaaaaat-agcttgcaagcttacacaagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaa 32889624  T
Q  209 tactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
     || |   |||| | |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || || |||||||| ||||||||||    
T  32889625 cacaaaa-gaagcttttgaaccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaaaaacctcactacaaagacactca 32889723  T
Q  309 accctaaagtgacctccttt 328  Q
    |||||||||| |||||||||    
T  32889724 accctaaagttacctccttt 32889743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 377
Target Start/End: Complemental strand, 47704056 - 47703679
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | || ||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||    
T  47704056 tgaaagaaaggaaaaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatgaaa 47703958  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaat 196  Q
    ||| || |||    |||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||  || ||||  ||||    
T  47703957 gtgttacaaaagaattacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccattttgt--gtcacccactctcacaatatgaat 47703860  T
Q  197 cctaagagaaaatactatttgaagttattg-atccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctca 293  Q
    |||||||||||| || |   |||||| ||  ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||  |||| ||||    
T  47703859 cctaagagaaaacacaaaaggaagtttttttatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctca 47703760  T
Q  294 ctacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaa 377  Q
    |||| |||||||||||||||||||| ||||||||| || || |||||||  |||||||| ||||||||||||||| ||||||||    
T  47703759 ctacaaagacactcaaccctaaagttacctcctttgta-ttctcaagtt--tctctctcaaagccacacacaaaagatgaagaa 47703679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 29651788 - 29652118
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| ||| || |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  29651788 tgaaagaaaggaacaaacacaccaagatttttgacccagttcggtccaatatgaccta-atctgggggagagagcagcactccaatccactatgatgaaa 29651886  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||    |||  | |||||| |||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| |||||||   |||    
T  29651887 gtgttacaaaagaattacaagaaattaacttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaa 29651984  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||  || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||  |||||    
T  29651985 tcctaagagaaaacacaaaaggaaactttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcac 29652084  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| |||||||||||||||||||| |||||||||    
T  29652085 tacaaagacactcaaccctaaagttacctccttt 29652118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 19072904 - 19073256
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaa 99  Q
    |||||||| | ||||||||||||||  |||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||| |||||    
T  19072904 tgaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactaagatgaa 19073002  T
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaa-tgaat 196  Q
    |||| || |||   ||||  | ||||||||||| ||||| | ||| |||||| ||||||||||||||||||||    ||||| |||| |||||| ||||     
T  19073003 agtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaatacctaatttctacccattttgt--gtcactcacactctcaaatgaac 19073100  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctca 293  Q
    |||||||||||| || |   |||| || ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||  ||  |||| ||||    
T  19073101 cctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctca 19073200  T
Q  294 ctacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctc 350  Q
    |||| ||||||||||||||| |||| ||||||||| || ||  ||||||||||||||    
T  19073201 ctacaaagacactcaaccctcaagttacctcctttgta-ttcccaagtttctctctc 19073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 19120794 - 19121146
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaa 99  Q
    |||||||| | ||||||||||||||  |||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||| |||||    
T  19120794 tgaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactaagatgaa 19120892  T
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaa-tgaat 196  Q
    |||| || |||   ||||  | ||||||||||| ||||| | ||| |||||| ||||||||||||||||||||    ||||| |||| |||||| ||||     
T  19120893 agtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaatacctaatttctacccattttgt--gtcactcacactctcaaatgaac 19120990  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctca 293  Q
    |||||||||||| || |   |||| || ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||  ||  |||| ||||    
T  19120991 cctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctca 19121090  T
Q  294 ctacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctc 350  Q
    |||| ||||||||||||||| |||| ||||||||| || ||  ||||||||||||||    
T  19121091 ctacaaagacactcaaccctcaagttacctcctttgta-ttcccaagtttctctctc 19121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 13598375 - 13598705
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| |||||||||||||  ||||||    
T  13598375 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagcccttcaatccactatgatgaaa 13598473  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatga---a 195  Q
    ||| || |||   | ||  | ||||||||||| ||||| | | |||||||| || |||||||||| ||||||    |||||||||| |||||||||   |    
T  13598474 gtgttacaaaagagatacaagaaattagcttataagcttacacaagaacaagacttaatttctactcattttgt--gtcacccacactctcaatgatgaa 13598571  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  |||  |||||    
T  13598572 tcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcac 13598671  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| ||||||||||||| |||||| |||||||||    
T  13598672 tacaaagacactcaaccataaagttacctccttt 13598705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 122 - 377
Target Start/End: Complemental strand, 40816814 - 40816560
Alignment:
Q  122 aaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaa 219  Q
    ||||||||||| ||||| | ||| |||||| ||||||||||||| ||||| |   |||||||||| ||||||||||||||||||||||| || |   |||    
T  40816814 aaattagcttataagcttacaaaagaacaagacctaatttctactcatttgt---gtcacccacactctcaatgaatcctaagagaaaacacaaaaggaa 40816718  T
Q  220 g-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagacactcaaccctaaa 316  Q
    | || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||  |||| |||||||| ||||||||||||||| ||    
T  40816717 gctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaa 40816618  T
Q  317 gtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaa 377  Q
    || ||||||||| || ||  ||||||  |||||||| ||||||||||||||| ||||||||    
T  40816617 gttacctcctttgta-ttcccaagtt--tctctctcaaagccacacacaaaagatgaagaa 40816560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 3 - 328
Target Start/End: Complemental strand, 47102959 - 47102631
Alignment:
Q  3 aaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagt 102  Q
    |||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||| | ||||| ||||||  | ||||||||||| |||||| |    
T  47102959 aaagaaaggaacaaacacaccaaaattgttgacccagttcggtccaatatgaccta-atctaggggagagagcagccatccaatccactaagatgaaaat 47102861  T
Q  103 gatataaagaggttatgaaaaattagcttaaaagctcataaa-gaacaaa-cctaatttcta--cccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    | || || ||| |||  | |||||| |||| ||||  | ||| ||||||  |||||||||||  |||||||||||  |||| |||| |||||||||||||    
T  47102860 gttacaatgag-ttacaagaaattaacttataagcatacaaaagaacaagtcctaatttctatacccatttttcatatcactcacactctcaatgaatcc 47102762  T
Q  199 taagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac 297  Q
    ||||| |||| || |    ||| || ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||  |||| ||||||||    
T  47102761 taagaaaaaacacaaaagaaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactac 47102662  T
Q  298 gaagacactcaaccctaaagtgacctccttt 328  Q
     |||||||||||||||||||| |||||||||    
T  47102661 aaagacactcaaccctaaagttacctccttt 47102631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 328
Target Start/End: Original strand, 22819487 - 22819736
Alignment:
Q  83 caatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcaccc 181  Q
    |||||||| || |||||||||||| |||   ||||  | ||||||||||   |||||| |||||| || || ||||||||| ||||||||||||||||||    
T  22819487 caatccaccaagatgaaagtgatacaaatgagttacaagaaattagctttttagctcacaaagaataagacataatttctaaccatttttcaagtcaccc 22819586  T
Q  182 acaatctcaatgaatcctaagagaaaatact--atttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaa 278  Q
    ||| ||||||||||||||||||||||| ||   |   |||| || |||||||||||||||||||||| | ||||||||||||| ||| ||||||||||||    
T  22819587 acactctcaatgaatcctaagagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatgtaactacccaaggtgtttacaatgtttcccaa 22819686  T
Q  279 cccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||  |||| |||||||| |||||||| || |||||||| |||||||||    
T  22819687 cccaagagaacctcactacaaagacactaaatcctaaagttacctccttt 22819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 9476238 - 9476567
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||| | ||||| ||||||||| ||||||||||  ||||||    
T  9476238 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctaggggagagagcagctctccaatccactatgatgaaa 9476336  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatg--aat 196  Q
    ||  || |||   ||||| | ||||||||||| ||||| | | |||||||| |||||||||||| |||||||    ||||| |||  || |||||  |||    
T  9476337 gtattacaaaagagttataagaaattagcttacaagcttacacaagaacaagacctaatttctatccattttgt--gtcactcactctcacaatgtgaat 9476434  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    | |||||||||| || |   |||| || |||||||||| |||||||||||||||||||||||| || ||| |||||||||||||| |  |||| ||||||    
T  9476435 cttaagagaaaacacaaaaggaagctttttgatccttcaaatggtgaaatctcactacccaagatgtttacaatgtttcccaaccaaagagaacctcact 9476534  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||| ||||||| ||||| |||||||||    
T  9476535 acaaagacattcaacccaaaagttacctccttt 9476567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 12 - 282
Target Start/End: Complemental strand, 16124625 - 16124352
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| || ||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||||| || |||     
T  16124625 aacaaacacaccaagattgttgactcagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 16124527  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaatcctaagagaa 206  Q
      ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    || ||||||| | |||||   ||||||||||||||    
T  16124526 gagttacaagaaattagcttataagcttacataagaacaagacctaatttctacccattttgt--gttacccacactttcaataatgaatcctaagagaa 16124429  T
Q  207 aatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaaccca 282  Q
    || || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  16124428 aacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccca 16124352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 32737023 - 32736909
Alignment:
Q  95 atgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagtcacccacaatctcaatg 193  Q
    ||||| |||||| ||||||||||  ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||| || |||||    
T  32737023 atgaaggtgatacaaagaggttacaaaaaattagcttaaaagttcataaagaacaaaccctaatttctacccatttttcaagtcatcgacactcacaatg 32736924  T
Q  194 aatcctaagagaaaa 208  Q
    |||||||||||||||    
T  32736923 aatcctaagagaaaa 32736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 34 - 324
Target Start/End: Original strand, 3281718 - 3282008
Alignment:
Q  34 acccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaa 133  Q
    |||||||||||| |||| | ||||| |||||| ||||| ||||||||| |||||||| |  ||||||||| || |||||| |||  | ||| ||||||      
T  3281718 acccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaagag-ttacaagaaaatagcttgc 3281815  T
Q  134 aagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatga---atcctaagagaaaatactatttgaagttattgat 228  Q
    ||||| | | |||||||| ||||||||||||||||||| |   ||  |||||  |||||||||   | |||||||||| | || |   |||| | |||||    
T  3281816 aagcttacacaagaacaagacctaatttctacccatttgt---gtttcccactctctcaatgatgaaccctaagagaagacacaaaaggaagcttttgat 3281912  T
Q  229 ccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctc 324  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||||| |||||| |||||    
T  3281913 ccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacctc 3282008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 26645019 - 26644702
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | |||||||||||||| |  ||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||| ||  ||||    
T  26645019 tgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccattatgatga 26644921  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatga-- 194  Q
    ||||| || |||||| |||  | ||| ||||||  ||||| | | |||||||| ||||||||||||||||||| |   ||  | |||  |||||||||      
T  26644920 aagtgttacaaagag-ttacaagaaaatagcttgcaagcttacacaagaacaagacctaatttctacccatttgt---gtttctcactctctcaatgatg 26644825  T
Q  195 -atcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctca 293  Q
     | |||||||||| | || |   |||| | |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| ||||   |||    
T  26644824 aaccctaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaaaagatcttca 26644725  T
Q  294 ctacgaagacactcaaccctaaa 316  Q
    |||| ||||||||||||||||||    
T  26644724 ctacaaagacactcaaccctaaa 26644702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 224 - 357
Target Start/End: Complemental strand, 13604518 - 13604387
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||| |||||||||||||||  |||    
T  13604518 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagatactcaaccctaaagttccct 13604419  T
Q  324 cctttttatttttcaagtttctctctctctaagc 357  Q
    ||||| ||   | ||||||||||||||| |||||    
T  13604418 cctttgta--atccaagtttctctctctttaagc 13604387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 27104297 - 27104194
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  || | |||||||| ||||||||||||| |||||| ||||    
T  27104297 ttgattcttccaatggtgaaatctcactacccaaggtgcttataatgtttcccaacccaagag-acctcactacaaagacactcaaccttaaagttacct 27104199  T
Q  324 ccttt 328  Q
    |||||    
T  27104198 ccttt 27104194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 35109537 - 35109445
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaacct-aatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatacta 213  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||| || |||||||||||| ||||||||||||    
T  35109537 aaattagcttaaaagctcacaaagaacaaaccttaatttctacccaattttcaagtcacacacactcacaatgaatcctacgagaaaatacta 35109445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 37069968 - 37070072
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||||| |||||| ||||    
T  37069968 ttgatccttccaatggtgaaatctcattatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacct 37070067  T
Q  324 ccttt 328  Q
    |||||    
T  37070068 ccttt 37070072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 19358735 - 19358632
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg-tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctc 324  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||  |||||||| |||||||||||||||| |||  ||||    
T  19358735 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaaaagatcctcactacaaagacactcaaccctagagttccctc 19358636  T
Q  325 cttt 328  Q
    ||||    
T  19358635 cttt 19358632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 21536691 - 21536362
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | |||||||||||||| |  ||||| ||||||||||||  ||  | ||||| |||||| ||||| ||||||||| ||||||||||  ||||    
T  21536691 tgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtaaaaaatgaccta-atctgggggagagagcagctctccaatccactataatga 21536593  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatga-- 194  Q
    ||||| || |||||| |||  | ||| ||||||  ||||| | | |||||||| || |||||||||||| ||| |   || ||||||  |||||||||      
T  21536592 aagtgttacaaagag-ttacaagaaaatagcttgcaagcttacacaagaacaatacttaatttctacccgtttgt---gttacccactctctcaatgatg 21536497  T
Q  195 -atcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctca 293  Q
     | |||||||||| | || |   |||| | | |||||||||||||||||||||| ||||||||||||| ||| ||||||| |||||| |  |||  ||||    
T  21536496 aaccctaagagaagacacaaaaggaagctttcgatccttccaatggtgaaatcttactacccaaggtgtttacaatgttttccaacctaagagatcctca 21536397  T
Q  294 ctacgaagacactcaaccctaaagtgacctccttt 328  Q
    |||| |||||||||||||||||||| |||||||||    
T  21536396 ctacaaagacactcaaccctaaagttacctccttt 21536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 19361324 - 19361221
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg-tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctc 324  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||  |||  |||||||| |||||||||||||||| |||  ||||    
T  19361324 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctc 19361225  T
Q  325 cttt 328  Q
    ||||    
T  19361224 cttt 19361221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 24202661 - 24202557
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| ||||||||||||||||||||  |||    
T  24202661 gatccttccaatggtgagatctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccct 24202562  T
Q  324 ccttt 328  Q
    |||||    
T  24202561 ccttt 24202557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 9022857 - 9022715
Alignment:
Q  168 ttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattat 266  Q
    ||||||||||| ||||| || ||||||||||||||||||||  | |   |||| || || |||||||||||||||||||||||||||  |||||| |||     
T  9022857 ttttcaagtcaaccacactcacaatgaatcctaagagaaaactcaag--gaagcttttttatccttccaatggtgaaatctcactacgaaaggtgtttac 9022760  T
Q  267 aatgtttcccaacccagaagaatctcactacgaagacactcaacc 311  Q
    |||||||| |||||||  |||| |||||||| |||||| ||||||    
T  9022759 aatgtttctcaacccaagagaacctcactacaaagacattcaacc 9022715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 19366200 - 19366096
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattata--atgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||| ||| |  || ||||||||||||  |||  |||||||| |||||||||||||||| |||  |||    
T  19366200 gatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 19366101  T
Q  324 ccttt 328  Q
    |||||    
T  19366100 ccttt 19366096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 17345519 - 17345432
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    |||||||| ||| ||| || |||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||| ||||||||||    
T  17345519 aaattagcataagagcccacaaagaacaaaacctaatttctacccattttttaagtcacccacactcttaatgaatcttaagagaaaa 17345432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 27104481 - 27104391
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtg 103  Q
    |||||||||||||| |||||| || ||||||||| |||| ||||||| |||||| ||||| ||||||||| ||||||||||  |||||||||    
T  27104481 aacaaacacaccaagattgttgacacagttcggtccaatataaccta-atctgggggagagagcagctctccaatccactatgatgaaagtg 27104391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 9023890 - 9023785
Alignment:
Q  71 atagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccattt 169  Q
    |||| |||||| ||||||||||| |||||||||||| |||  || ||  | |||||||| |||||||||| |||||| || |||||||||||||||| ||    
T  9023890 atagtagctctccaatccactaagatgaaagtgatacaaatgggatacaataaattagcataaaagctcacaaagaataagacctaatttctacccactt 9023791  T
Q  170 ttcaag 175  Q
    ||||||    
T  9023790 ttcaag 9023785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 10996952 - 10997140
Alignment:
Q  16 aacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggt 115  Q
    ||||||||||||||||||||||||||||||| |   | |||||| ||| |  | || |||| |||||  ||||||||||| ||  |||||| ||| | ||    
T  10996952 aacacaccaatattgtttacccagttcggtttagaatgacctac-tcttg--gtgaaagcaactctttgatccactaataaga--gtgatacaaatatgt 10997046  T
Q  116 tatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    ||  | |||||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| || || |  |||||||||| ||||||    
T  10997047 tacaagaaattaacttaaaagataacaaataacaaaccctaatttctacccatttttcaagtcaccctcactcacgttgaatcctaaaagaaaa 10997140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 19379964 - 19379917
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatgttt 273  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  19379964 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 19379917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 775649 - 775750
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||| ||| |||||| ||||| |||||| |||| | ||||| |||||| ||||| || |||||| ||||||||||| ||||||    
T  775649 tgaaagaaaggaacaaacacatcaagattgttgacccaattcggtccaatatgaccta-atctgggggagagagtagctctccaatccactaagatgaaa 775747  T
Q  101 gtg 103  Q
    |||    
T  775748 gtg 775750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 11032342 - 11032268
Alignment:
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaac-aaacctaatttctacccatttttca 173  Q
    ||||||||||||||||||  | ||||||| |||||| |||| ||||||| |||| ||||||||||||||||||||    
T  11032342 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacataatttctacccatttttca 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 546
Target Start/End: Original strand, 8871522 - 8871583
Alignment:
Q  485 catcgtgttatgttgcctctgcattgtgccacgatttttccagttacaacctcccagaaaca 546  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| ||| ||| ||| |||||    
T  8871522 catcgtgtcatgttgcctctgcatcgtgccacgatttttccagtgacagcctaccataaaca 8871583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 8550891 - 8550941
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  8550891 aaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttt 8550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 918480 - 918342
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagt-cacccacaatctcaatgaatcctaagagaaaatactatttgaa 219  Q
    |||||| |||| || |||| |||||||||||| ||||||||||||||||||||| | ||| || |  | |||||||||||||||||||| | || | |||    
T  918480 aaattatcttacaaactcacaaagaacaaaccataatttctacccatttttcaattccactcaaacccacaatgaatcctaagagaaaacaataatggaa 918381  T
Q  220 gttattgatccttccaatggtgaaatctcactacccaag 258  Q
    | | ||||| |||||  |  ||| |||||||||||||||    
T  918380 gcttttgatgcttcctctaatgagatctcactacccaag 918342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 34603640 - 34603589
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccattttt 171  Q
    |||||||||||||  |||||| ||||||||| ||||||||||||||||||||    
T  34603640 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccattttt 34603589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 41360964 - 41360928
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  41360964 aagctcacaaagaacaaacctaatttctacccatttt 41360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 37168361 - 37168311
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  37168361 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttt 37168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 7482335 - 7482384
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccattt 169  Q
    |||||||||||||  |||||| ||||||||| ||||||||||||||||||    
T  7482335 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccattt 7482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 19754545 - 19754507
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  19754545 aagctcacaaagaacaaccctaatttctacccatttttc 19754507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 47255458 - 47255496
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  47255458 aagctcacaaagaacaaccctaatttctacccatttttc 47255496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 50169328 - 50169366
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  50169328 aagctcacaaagaacaaccctaatttctacccatttttc 50169366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 40122302 - 40122354
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttttc 172  Q
    |||||||||||||  |||||| |||||||||| |||||||| |||||||||||    
T  40122302 aaattagcttaaacaagctcacaaagaacaaatctaatttcgacccatttttc 40122354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 193661 - 193625
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  193661 aagctaataaagaacaaccctaatttctacccatttt 193625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 4552755 - 4552791
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  4552755 aagctcacaaaggacaaacctaatttctacccatttt 4552791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 10925148 - 10925097
Alignment:
Q  299 aagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    ||||| |||||||||||||| |||||| ||| ||||| |||||||||||||||    
T  10925148 aagaccctcaaccctaaagttacctcc-tttgattttccaagtttctctctct 10925097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 13547207 - 13547243
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  13547207 aagctcacaaagaacaaccctaatttctacccatttt 13547243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 13549118 - 13549154
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  13549118 aagctcacaaagaacaaccctaatttctacccatttt 13549154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 29136297 - 29136261
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  29136297 aagctcacaaagaacaaccctaatttctacccatttt 29136261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 37033191 - 37033227
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  37033191 aagctcacaaagaacaaccctaatttctacccatttt 37033227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 5112225 - 5112564
Alignment:
Q  11 aaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    ||||||||||||||| || ||  |||||||||||| |||| | | |||| | ||| || || ||||||||| ||||||||||||||||||||| || |||    
T  5112225 aaacaaacacaccaagatggta-acccagttcggtccaatatgatctactt-tgggggtgagagcagctctccaatccactaatatgaaagtgttacaaa 5112322  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
      |||||  | |||||||||||||| |||||||| ||| | ||||||||| |||| |||||| ||||||| |||| || ||||||||||||||||||||     
T  5112323 tgggttacaagaaattagcttaaaaactcataaaaaacgagacctaatttgtacctattttttaagtcactcacactcacaatgaatcctaagagaaaac 5112422  T
Q  210 actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactca 308  Q
    |  |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||| ||||| || ||||||||||    
T  5112423 ataaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcacaacaaagacactca 5112522  T
Q  309 accctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    | |||||| | ||||||||| ||  | ||||||||||||||||    
T  5112523 aacctaaaattacctcctttgta-atctcaagtttctctctct 5112564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 16623402 - 16623085
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||||| |||||||||||| ||||||||| ||||||||||  ||||||||| || |||     
T  16623402 aacaaacacaccaagattgttgacccagttcggttcaatatgaccta-atctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaa 16623304  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaa 207  Q
      ||||  | ||||||||| | ||||| | | |||||||| ||||||||||||||||||||    |||||||||  || ||||  ||||||||| |||||    
T  16623303 gagttacaagaaattagctaataagcttacagaagaacaagacctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaaaagaaa 16623206  T
Q  208 atactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactc 307  Q
    | || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||    
T  16623205 acacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactc 16623106  T
Q  308 aaccctaaagtgacctccttt 328  Q
    ||||||||||| |||||||||    
T  16623105 aaccctaaagttacctccttt 16623085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 10047356 - 10047686
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  10047356 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaa 10047454  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctc---aatgaa 195  Q
    ||| || |||   ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||| ||||   ||||||    
T  10047455 gtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaataatgaa 10047552  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    |||||||| |||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  ||||     
T  10047553 tcctaagacaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcat 10047652  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| |||||||||||||||||||| |||||||||    
T  10047653 tacaaagacactcaaccctaaagttacctccttt 10047686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 37 - 328
Target Start/End: Complemental strand, 39774389 - 39774097
Alignment:
Q  37 cagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaag 136  Q
    ||||||||| |||| | |||||| ||||| ||| | ||||||||| ||||||||||| |||||||||||| ||| ||||||  | |||||||||||||||    
T  39774389 cagttcggtccaatatgacctac-tctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaataggttacaagaaattagcttaaaag 39774291  T
Q  137 ctcataaag-aacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttc 233  Q
    |||| |||| ||||| |||||||||||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||| |   |||| || |||||| |||    
T  39774290 ctcacaaagaaacaagacctaatttcta-ccaattttcatgtcactcacactctcaatgaatcccaagagaaaatacaaaaggaagctttttgatcattc 39774192  T
Q  234 caatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||| ||  |||| |||  ||| || |  |||||||||||||| |||||||||    
T  39774191 caatggtgaaaactcactacccaaggtgtttacaatgtttcccaactcaagagaacctcgttacaaataatctcaaccctaaagttacctccttt 39774097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 24333786 - 24334164
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| |||||||||||||||| |||||| || ||||||||| |||| | ||||| || ||| ||||| ||||||||| ||||||||||  |||||     
T  24333786 tgaaagaaagaaacaaacacaccaagattgttaactcagttcggtccaatatgaccta-atttgggggagagagcagctctccaatccactatgatgaac 24333884  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaaa--cctaatttctacccatttttcaagtcacccacaatctcaat--gaa 195  Q
    ||| || |||   ||||| ||||||||||||| ||||| | | ||||| |||  |||||||||||||||||||    |||| ||||  || ||||  |||    
T  24333885 gtgttacaaaagagttataaaaaattagcttacaagcttacacaagaaaaaaaacctaatttctacccattttgt--gtcagccactctcacaatatgaa 24333982  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctc 292  Q
    ||||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||  |||| |||    
T  24333983 tcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctc 24334082  T
Q  293 actacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaa 377  Q
    ||||| ||||| |||||||||||||| |||| |||| || ||  ||||||  |||||||| ||||||||||||||| ||||||||    
T  24334083 actacaaagactctcaaccctaaagttaccttctttgta-ttcccaagtt--tctctctcaaagccacacacaaaagatgaagaa 24334164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 38152559 - 38152234
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | || || |||||| ||||| ||||||||| ||||||||||   |||||    
T  38152559 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacata-atctgggggagagagcagctctccaatccactatggtgaaa 38152461  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||   ||||| | ||||||||||| ||||| | | |||||||| |||||||||||||| |||||    |||||||||| |||||||   |||    
T  38152460 gtgttacaaaagagttataagaaattagcttataagcttacacaagaacaagacctaatttctaccaattttgt--gtcacccacactctcaataatgaa 38152363  T
Q  196 tcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    ||||||||||||| || | | |||| | |||||||||||||||||||| | ||||||||||||||| ||| ||| ||||||| ||||  |||  ||||||    
T  38152362 tcctaagagaaaacacaaatggaagcttttgatccttccaatggtgaattgtcactacccaaggtgtttacaatatttcccatcccaagagatcctcact 38152263  T
Q  296 acgaagacactcaaccctaaagtgacctc 324  Q
    || |||||||||||||||||||| |||||    
T  38152262 acaaagacactcaaccctaaagttacctc 38152234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 3777526 - 3777854
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||| | |||||| |||||||||||| |||| ||||||| |||| ||||||| || |||||| ||||||||||  ||||||    
T  3777526 tgaaagaaaggaacaaacacaccgagattgttgacccagttcggtccaatataaccta-atctagaggagagagtagctctccaatccactatgatgaaa 3777624  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaat 196  Q
    ||| || |||||| |||  | ||| ||||||  || || | | |||||||| | ||||||||||||||||||    |||||||||  || ||||  ||||    
T  3777625 gtgttacaaagag-ttacaagaaaatagcttgcaaacttacacaagaacaagatctaatttctacccattttgt--gtcacccactctcacaatatgaat 3777721  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    ||||||||||||||| |   |||| || |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  ||||||    
T  3777722 cctaagagaaaatacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcact 3777821  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||||||||||||||||| |||||||||    
T  3777822 acaaagacactcaaccctaaagttacctccttt 3777854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 11 - 328
Target Start/End: Complemental strand, 1983409 - 1983092
Alignment:
Q  11 aaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    |||||||||||||||||| ||  |||||||||||| |||| | |||||| | ||| ||||||||||||||| ||||||||||  || ||||||||| |||    
T  1983409 aaacaaacacaccaatatggta-acccagttcggtccaatatgacctac-tatgggggagatagcagctctccaatccactaggatcaaagtgatacaaa 1983312  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaagaac-aaacctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat 209  Q
    | |||||  | ||||||||||  ||||||| ||||||| |||| ||||||||| || |||||||||||||| ||| |||||||||||||||||||||||     
T  1983311 ggggttacaagaaattagcttgcaagctcacaaagaacaaaacataatttctatcc-tttttcaagtcacctacactctcaatgaatcctaagagaaaac 1983213  T
Q  210 actatttgaag-ttattgatccttccaatggtg-aaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactc 307  Q
     | |   |||| || || ||||||||||||||| |||||| |||| ||| |||| ||| |||||| | |||||||  | || |||||||| |||||||||    
T  1983212 ccaaaaggaagcttttttatccttccaatggtgaaaatcttactaaccagggtgtttacaatgttacacaacccaagataacctcactacaaagacactc 1983113  T
Q  308 aaccctaaagtgacctccttt 328  Q
    ||||||||||| |||| ||||    
T  1983112 aaccctaaagttaccttcttt 1983092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 36315349 - 36315022
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| | |||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||    
T  36315349 tgaaagaaaggaacaaacacaccaagaatgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatgaaa 36315251  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||||| |||  | ||||||||||| ||||| | | |||| ||| ||||||||||||||||||| |   || ||||||| |||||||   |||    
T  36315250 gtgttacaaagag-ttacaagaaattagcttagaagcttacacaagagcaagacctaatttctacccatttgt---gttacccacactctcaataatgaa 36315155  T
Q  196 tcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    ||||| || |||| || |   |||| | ||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||  |||  ||| ||    
T  36315154 tcctacgaaaaaacacaaaaggaagcttttgatccttccaatggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctctct 36315055  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||||| ||||||||||| |||||||||    
T  36315054 acaaagacactaaaccctaaagttacctccttt 36315022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 36329558 - 36329231
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| | |||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||    
T  36329558 tgaaagaaaggaacaaacacaccaagaatgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatgaaa 36329460  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || |||||| |||  | ||||||||||| ||||| | | |||| ||| ||||||||||||||||||| |   || ||||||| |||||||   |||    
T  36329459 gtgttacaaagag-ttacaagaaattagcttagaagcttacacaagagcaagacctaatttctacccatttgt---gttacccacactctcaataatgaa 36329364  T
Q  196 tcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    ||||| || |||| || |   |||| | ||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||  |||  ||| ||    
T  36329363 tcctacgaaaaaacacaaaaggaagcttttgatccttccaatggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctctct 36329264  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||||| ||||||||||| |||||||||    
T  36329263 acaaagacactaaaccctaaagttacctccttt 36329231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 309
Target Start/End: Original strand, 18377347 - 18377645
Alignment:
Q  11 aaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    ||||||||||||||| || ||  ||||||||| |||| || | |||||| ||||||||||| |||||| || || |||||||| |||||||||||| |||    
T  18377347 aaacaaacacaccaagatggta-acccagttcagttctatatgacctac-tctggaggagagagcagccctccattccactaagatgaaagtgatacaaa 18377444  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaagaacaaa--cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
      |||||| | |||| |||||||||||||| ||||||  ||  ||||||||||||||| |||||| |||||||||| |  ||||||||||||||| ||||    
T  18377445 tgggttataagaaatcagcttaaaagctcacaaagaaacaagccctaatttctaccca-ttttcatgtcacccacacttacaatgaatcctaagaaaaaa 18377543  T
Q  209 tactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactc 307  Q
     || |  ||||| || ||||||||||||||||| |||||||| ||||||||| | ||| ||||||| ||| ||||  |||| |||||||| || ||||||    
T  18377544 cacaaaatgaagctttttgatccttccaatggtaaaatctcattacccaaggggtttacaatgttttccatcccaagagaacctcactacaaatacactc 18377643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 5269311 - 5268992
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||| ||| |||||| ||| |||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  5269311 tgaaagaaaggaacaaacacaacaagattgttgacctagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaa 5269213  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaa 195  Q
    ||| || ||            ||||||||||| ||||| | | |||||||| |||||||||||||||||| |    |||||||||| |||||||   |||    
T  5269212 gtgttacaag-----------aaattagcttataagcttacacaagaacaagacctaatttctacccattgtgt--gtcacccacactctcaataatgaa 5269126  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||| || ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||  |||  |||||    
T  5269125 tcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcac 5269026  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| |||||||||||||||||||| |||||||||    
T  5269025 tacaaagacactcaaccctaaagttacctccttt 5268992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 122 - 328
Target Start/End: Complemental strand, 42599573 - 42599367
Alignment:
Q  122 aaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaa 219  Q
    ||||||||||| ||||| | ||| |||||| ||||||||||||||||||||    ||||||| || ||||||||||||||||||||||| || |   |||    
T  42599573 aaattagcttataagcttacaaaagaacaagacctaatttctacccattttgt--gtcacccgcactctcaatgaatcctaagagaaaacacaaaaggaa 42599476  T
Q  220 gttattg-atccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
    ||| ||  ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |  |||| |||||||| ||||||||||| ||||||||    
T  42599475 gtttttttatccttccaatggtgaaatctcactacccaaggtgtttagaatgtttcccaaccgaagagaacctcactacaaagacactcaa-cctaaagt 42599377  T
Q  319 gacctccttt 328  Q
     |||||||||    
T  42599376 tacctccttt 42599367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 6743523 - 6743207
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| || ||| |||||||||||| |||| | ||||| ||||   ||||| |||||| || ||||||||||  ||||||||| || |||     
T  6743523 aacaaacacaccaagat-gttgacccagttcggtccaatatgaccta-atctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaa 6743426  T
Q  112 aggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaatcctaagagaa 206  Q
      | ||  ||||||||||||| | ||| | ||| |||||| ||||||||||||||||||||    |||||||||| |||||||   ||||||||||||||    
T  6743425 gagctacaaaaaattagcttata-gcttacaaaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagagaa 6743329  T
Q  207 aatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacact 306  Q
    || || |   |||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||  |||  ||| |||| ||||||||    
T  6743328 aacacaaaaggaagtttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcgctacaaagacact 6743229  T
Q  307 caaccctaaagtgacctccttt 328  Q
    ||| ||| |||| |||||||||    
T  6743228 caaacctcaagttacctccttt 6743207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 122 - 328
Target Start/End: Complemental strand, 25862033 - 25861825
Alignment:
Q  122 aaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaat-actatttga 218  Q
    ||||||||||| ||||| | | |||||||| |||||||| |||||||||||    |||||||||| |||||||||||||||||||||||  || |   ||    
T  25862033 aaattagcttataagcttacacaagaacaagacctaattcctacccattttgt--gtcacccacactctcaatgaatcctaagagaaaaacacaaaagga 25861936  T
Q  219 agttatt-gatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaag 317  Q
    |||| || |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||    
T  25861935 agttttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaag 25861836  T
Q  318 tgacctccttt 328  Q
    | |||| ||||    
T  25861835 ttaccttcttt 25861825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 16 - 282
Target Start/End: Original strand, 37781854 - 37782123
Alignment:
Q  16 aacacaccaatattgtttacccagttcggttcaa-tctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagagg 114  Q
    |||| |||||||||||||||||||||||||| || | | |||||| || |||| ||| || | |||| ||||||||||  || ||||||||| |||||||    
T  37781854 aacaaaccaatattgtttacccagttcggtttaaatatgacctacttc-ggag-agagagtaactctccaatccactataataaaagtgatacaaagagg 37781951  T
Q  115 ttatgaaaaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcacccacaatc-tcaatgaatcctaagagaaaatact 212  Q
    |||  | |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||||||| ||| || | |||||||| |||||||||| |||    
T  37781952 ttacaagaaattagcttaaaaactcacaaagaacaaatcttaatttctacccatttttcaagtcacctacactcgtaaatgaatcttaagagaaaacact 37782051  T
Q  213 atttga-agttattgatccttccaatggtgaaatctcactacccaaggtgatta-taatgtttcccaaccca 282  Q
    |   || | || ||||| ||||||||  |||||||||||||||||||||| |||  ||||||| ||||||||    
T  37782052 aaaagagactttttgattcttccaataatgaaatctcactacccaaggtgtttacaaatgttttccaaccca 37782123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 328
Target Start/End: Complemental strand, 16628801 - 16628664
Alignment:
Q  191 atgaatcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatc 290  Q
    ||||||||||| |||||| || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |    
T  16628801 atgaatcctaaaagaaaacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcc 16628702  T
Q  291 tcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  16628701 tcactacaaagacactcaaccctaaagttacctccttt 16628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 5396793 - 5396463
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||| | || ||||||||||| |  ||||| |||||||||||| |||| | ||||| |||||||||||| ||||||||| ||||||||||  ||||    
T  5396793 tgaaagaaaggaagaaacacaccaaaagattgttgacccagttcggtccaatatgaccta-atctggaggagagagcagctctccaatccactatgatga 5396695  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctca---atg 193  Q
    ||||| |  ||||| ||||  | ||| ||||||  ||||| | | |||||||| ||||||||||||||||||| |   || || |||  |||||   |||    
T  5396694 aagtgttgcaaaga-gttacaagaaaatagcttgcaagcttacacaagaacaagacctaatttctacccatttgt---gttactcactctctcaatgatg 5396599  T
Q  194 aatcct-aagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctc 292  Q
    || ||| ||||||| | || |    ||| | ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||    
T  5396598 aaccctaaagagaagacacaaaagaaagcttttgattcttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctc 5396499  T
Q  293 actacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||| |||||||||||||||||||| |||||||||    
T  5396498 actacaaagacactcaaccctaaagtaacctccttt 5396463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 54867161 - 54867484
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | |||||  ||||| ||||| |||||| |||||||| ||||  ||||||    
T  54867161 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-gtctgg-ggagagagcagcccttcaatcaactatgatgaaa 54867258  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
     || || |||   ||||| | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||| |||||  ||||||||||||    
T  54867259 atgttacaaaatagttataagaaattagcttataagcttacacaagaacaatacctaatttctacccatttt--gtgtcatccaca--ctcaatgaatcc 54867354  T
Q  199 taagagaaaatac-tatttgaa--gttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    |||||||||| ||  |   |||   || |||||||||||||||||||||||||||||||||  ||| ||| ||    | ||||||||  ||| |||||||    
T  54867355 taagagaaaacacaaaaaagaaagctttttgatccttccaatggtgaaatctcactacccatagtgtttacaa---cttccaacccaagagattctcact 54867451  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||||||||||||||||| |||||||||    
T  54867452 acaaagacactcaaccctaaagttacctccttt 54867484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 8689392 - 8689288
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||  |||  |||||||| |||||||| ||||||||||| ||||    
T  8689392 ttgatccttccaatggtgaaatctcactatccaaggtgtttaaaatgtttcccaacccaagagatcctcactacaaagacactaaaccctaaagttacct 8689293  T
Q  324 ccttt 328  Q
    |||||    
T  8689292 ccttt 8689288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 5143462 - 5143563
Alignment:
Q  225 tgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctc 324  Q
    |||||||||||||||||||||||||||||| |||||| ||| || ||||||||| |||  |||  |||||||| |||||||||||||||||||| |||||    
T  5143462 tgatccttccaatggtgaaatctcactacctaaggtgtttacaaagtttcccaatccaagagatcctcactacaaagacactcaaccctaaagttacctc 5143561  T
Q  325 ct 326  Q
    ||    
T  5143562 ct 5143563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 252 - 387
Target Start/End: Original strand, 6542378 - 6542510
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    |||||||||| ||| ||||||||||||||||  |||| |||| ||| |||||||||||||||||||| ||||||||| ||||  | | |||  |||||||    
T  6542378 acccaaggtgtttacaatgtttcccaacccaagagaacctcattacaaagacactcaaccctaaagttacctcctttgtattcct-aggtt--tctctct 6542474  T
Q  352 ctaagccacacacaaaacatgaagaataaaacctta 387  Q
    | ||||||||||||||||||||||||| || |||||    
T  6542475 caaagccacacacaaaacatgaagaatgaagcctta 6542510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 224 - 387
Target Start/End: Complemental strand, 3793976 - 3793814
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagacactcaaccctaaagtgac 321  Q
    ||||||||| | |||||||||||||||||||||||||| ||| ||||||| ||||||  ||  |||| |||||||  |||||||||||||||||||| ||    
T  3793976 ttgatcctttctatggtgaaatctcactacccaaggtgtttacaatgttttccaaccctcaagagaacctcactataaagacactcaaccctaaagttac 3793877  T
Q  322 ctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaataaaacctta 387  Q
    ||||||| || ||  ||||||  |||||||| |||| | |||||||| ||||||||  ||||||||    
T  3793876 ctcctttata-ttcccaagtt--tctctctcaaagctaaacacaaaagatgaagaaagaaacctta 3793814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 34670679 - 34670573
Alignment:
Q  108 aaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaa 206  Q
    ||||||||||  | |||||||||||| |||||| |||||||||| | ||||||||| |||||||||||||||| |||| || ||||||||||||||||||    
T  34670679 aaagaggttacaagaaattagcttaatagctcacaaagaacaaatcataatttctatccatttttcaagtcactcacactcacaatgaatcctaagagaa 34670580  T
Q  207 aatacta 213  Q
    || ||||    
T  34670579 aacacta 34670573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 31985529 - 31985425
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    ||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||  |||  |||| ||| || |||||||||||||||||  |||    
T  31985529 ttgatccttcccatggtgaaatttcactacccaaggtgtttacaatgtttcccaacccaagagatcctcaatacaaaaacactcaaccctaaagttccct 31985430  T
Q  324 ccttt 328  Q
    |||||    
T  31985429 ccttt 31985425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 5147880 - 5147981
Alignment:
Q  225 tgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctc 324  Q
    ||||||||||||||||||||||||| || |||| ||| ||| ||||||||||||| ||  |||  || ||||| |||||||| ||||||||||| |||||    
T  5147880 tgatccttccaatggtgaaatctcattatccaatgtgtttacaatgtttcccaactcaagagatccttactacaaagacactaaaccctaaagttacctc 5147979  T
Q  325 ct 326  Q
    ||    
T  5147980 ct 5147981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 28468430 - 28468326
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattata--atgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||| ||| |  || ||||||||||||  |||  |||||||| |||||||| ||||||| |||  |||    
T  28468430 gatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagttccct 28468331  T
Q  324 ccttt 328  Q
    |||||    
T  28468330 ccttt 28468326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 252 - 378
Target Start/End: Complemental strand, 51337035 - 51336912
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    |||||||||| ||| ||||||| ||||||||  |||| |||||||| |||||| ||||||||||||| || |||||| ||||  | |||||  |||||||    
T  51337035 acccaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgtattcct-aagtt--tctctct 51336939  T
Q  352 ctaagccacacacaaaacatgaagaat 378  Q
    | ||||||| | |||||||||||||||    
T  51336938 caaagccacccgcaaaacatgaagaat 51336912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39245971 - 39246072
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  39245971 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaa 39246069  T
Q  101 gtg 103  Q
    |||    
T  39246070 gtg 39246072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 18912409 - 18912274
Alignment:
Q  76 agctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaa 174  Q
    |||||| ||||||||||  || | ||||||| ||| ||| ||  | ||||||| ||| || |||| |||||||||||| ||| || || |||||||||||    
T  18912409 agctctccaatccactatgataagagtgatacaaaaaggatacaagaaattagtttacaaactcacaaagaacaaaccctaaattatatccatttttcaa 18912310  T
Q  175 gtcacccacaatctcaatgaatcctaagagaaaata 210  Q
    ||||| || |  | ||||||||||||||||||||||    
T  18912309 gtcactcaaacccacaatgaatcctaagagaaaata 18912274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 198
Target Start/End: Original strand, 4956227 - 4956358
Alignment:
Q  73 agcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-------taatttctaccc 165  Q
    |||| |||| ||||||||||  || | | ||||| ||||||||||  | ||||||||| |||| |||||||||||||||||       ||||||||||||    
T  4956227 agcaactctccaatccactatgataagaatgataaaaagaggttacaagaaattagctaaaaaactcataaagaacaaaccctaattataatttctaccc 4956326  T
Q  166 atttttcaagtcacccacaatctcaatgaatcc 198  Q
    |  |||||||||||||||| || ||||||||||    
T  4956327 a-atttcaagtcacccacactcacaatgaatcc 4956358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 5871870 - 5871832
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  5871870 aagctcacaaagaacaaacctaatttctacccatttttc 5871832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 39593825 - 39593910
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaacctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaa 207  Q
    ||||||| ||| || |||| ||||||  |||||||||||||||| ||| ||||||||| || |  | |||||||||||||||||||    
T  39593825 aaattagtttacaaactcacaaagaatcaacctaatttctacccctttgtcaagtcactcaaacccacaatgaatcctaagagaaa 39593910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 48053071 - 48053140
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctct 81  Q
    |||||||| ||||| |||||||||||||||| || |||  | |||||| ||||||||||| |||||||||    
T  48053071 aacaaacagaccaagattgtttacccagttctgtccaaattgacctacgtctggaggagagagcagctct 48053140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 379430 - 379394
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  379430 aagctcacaaagaacaaacctaatttctacccatttt 379394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 12073442 - 12073406
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12073442 aagctcacaaagaacaaacctaatttctacccatttt 12073406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 36175205 - 36175290
Alignment:
Q  122 aaattagcttaaaagctcataaagaacaaac-ctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    ||||||||||||||||||||| |  || ||| ||||||||||||||||||  ||||||  |||| || |||||||||||| |||||||    
T  36175205 aaattagcttaaaagctcatacatgacgaactctaatttctacccattttctaagtca--cacactcacaatgaatcctatgagaaaa 36175290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 52467472 - 52467508
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  52467472 aagctcacaaagaacaaacctaatttctacccatttt 52467508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 4587929 - 4587862
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaagaatctcactac-gaagacactcaaccctaaagt 318  Q
    |||||||||| ||| ||||||||||||||||  |||| ||||||||  |||||||| |||||||||||    
T  4587929 acccaaggtgtttacaatgtttcccaacccatgagaacctcactacaaaagacacttaaccctaaagt 4587862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 16630789 - 16630699
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtg 103  Q
    ||||||||||||||  ||||| ||| |||||||| |||| | || || |||||||||||| | ||||||| ||||||||||  |||||||||    
T  16630789 aacaaacacaccaaggttgttgacctagttcggtccaatatgacata-atctggaggagagaacagctctccaatccactatgatgaaagtg 16630699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 41964479 - 41964429
Alignment:
Q  122 aaattagcttaaa--agctcataaagaacaaacctaatttctacccatttt 170  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  41964479 aaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttt 41964429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5143236 - 5143337
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||  | |||||| ||| |||||||| |||| | ||||| |||||| ||||| ||||||||| ||| ||||||  ||||||    
T  5143236 tgaaagaaaggaacaaacacactgagattgttgacctagttcggtccaatatgaccta-atctgggggagagagcagctctccaacccactatgatgaaa 5143334  T
Q  101 gtg 103  Q
    |||    
T  5143335 gtg 5143337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 21688299 - 21688261
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  21688299 aagctcacaaagaacaaccctaatttctacccatttttc 21688261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 24742168 - 24742237
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  24742168 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 24742237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 24969162 - 24969124
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  24969162 aagctcacaaagaacaaatctaatttctacccatttttc 24969124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 35662488 - 35662454
Alignment:
Q  137 ctcataaagaacaaacctaatttctacccattttt 171  Q
    |||||||||||||| ||||||||||||||||||||    
T  35662488 ctcataaagaacaaccctaatttctacccattttt 35662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 171
Target Start/End: Complemental strand, 5349952 - 5349923
Alignment:
Q  142 aaagaacaaacctaatttctacccattttt 171  Q
    ||||||||||||||||||||||||||||||    
T  5349952 aaagaacaaacctaatttctacccattttt 5349923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 13009548 - 13009585
Alignment:
Q  133 aaagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  13009548 aaagctcacgaagaacaaacctaatttctacccatttt 13009585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 12739793 - 12739844
Alignment:
Q  299 aagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    ||||| |||||||||||||| |||||| ||| |||| ||||||||||||||||    
T  12739793 aagaccctcaaccctaaagttacctcc-tttgatttctcaagtttctctctct 12739844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 12747999 - 12748050
Alignment:
Q  299 aagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    ||||| |||||||||||||| |||||| ||| |||| ||||||||||||||||    
T  12747999 aagaccctcaaccctaaagttacctcc-tttgatttctcaagtttctctctct 12748050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 29760868 - 29760938
Alignment:
Q  246 ctcactacccaaggtgattataatg---tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||   ||||||||||||  |||  ||| |||| |||||||||||||||    
T  29760868 ctcactacccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccct 29760938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 47038528 - 47038564
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  47038528 aagctcacaaagaacaaccctaatttctacccatttt 47038564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 48893839 - 48893922
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaaga--atctcactacgaagacactcaaccctaaagtgacctcctttttatt 333  Q
    |||||||||| ||| ||||||||| |||||  ||||  | |||||||| ||||||||||||||| || | ||||||||| ||||    
T  48893839 acccaaggtgtttacaatgtttccaaaccctaaagagaacctcactacaaagacactcaaccctcaaattacctcctttgtatt 48893922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 9054957 - 9054750
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    ||||||||| || |||||||||||||||| ||||| | |||| || |||| | |||||| ||||||||||| |||||||||  |||||||||| ||||||    
T  9054957 tgaaagaagcaatcaaacacaccaatattatttactctgttcagtccaatatgacctac-tctggaggagagagcagctctctaatccactaagatgaaa 9054859  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaac-ctaatttctacccatttttcaagtcacccacaatctcaatgaatcct 199  Q
    |||||| |||| |||||  | |||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  9054858 gtgatacaaagtggttacaagaaattagcttaaaagcgcacaaagaacaaaatctaatttctacccatttttcaagtcactcacactctcaatgaatcct 9054759  T
Q  200 aagagaaaa 208  Q
    |||||||||    
T  9054758 aagagaaaa 9054750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 19752503 - 19752186
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| ||| |||||||| |||| | |||||  ||| | ||||| ||||||||| ||||||||||| ||||||||| || || |    
T  19752503 aacaaacacaccaagattgttgacctagttcggtccaatatgacctag-tctaggggagagagcagctctccaatccactaagatgaaagtgttacaatg 19752405  T
Q  112 aggtt-atgaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaa 208  Q
    || |  | ||||||| |||||  ||||| | | ||||||||  ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  19752404 agttacaagaaaaat-agcttgcaagcttacacaagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaa 19752306  T
Q  209 tactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactc 307  Q
     || |   |||| || ||||||||||||||| |||||||||||||||||||||| ||| ||| |||| |||||||  |||| |||||||| |||||||||    
T  19752305 cacaaag-gaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatatttcacaacccaagagaacctcactacaaagacactc 19752207  T
Q  308 aaccctaaagtgacctccttt 328  Q
    ||||||||||| |||||||||    
T  19752206 aaccctaaagttacctccttt 19752186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 61 - 318
Target Start/End: Original strand, 3051156 - 3051415
Alignment:
Q  61 tctggaggagatagcagctcttcaatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacct-aattt 159  Q
    ||||||||||| |||| |||| ||||||||||| |||||||||||| |||   ||||  | |||||||| ||| |||||| |||||||||| || |||||    
T  3051156 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaattt 3051255  T
Q  160 ctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaag 258  Q
    |||||||||||||| |||||  ||| ||||||||||||||||||||||  || |   |||| || |||||| ||||||||||||||||||||||||||||    
T  3051256 ctacccatttttcatgtcacttacactctcaatgaatcctaagagaaagcacaaaaggaagctttttgatctttccaatggtgaaatctcactacccaag 3051355  T
Q  259 gtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagt 318  Q
     || ||| ||||||||||||| ||  |||| | |||||| ||||||||||||||||||||    
T  3051356 atgtttacaatgtttcccaactcaagagaaccccactacaaagacactcaaccctaaagt 3051415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 83 - 317
Target Start/End: Complemental strand, 7493212 - 7492976
Alignment:
Q  83 caatccactaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaa-cctaatttctacccatttttcaagtcaccc 181  Q
    ||||||||||| |||||||||||| ||||| ||||| | |||||| | |||||||||| | |||||||| |||||||||||||  |||||||||||||||    
T  7493212 caatccactaagatgaaagtgatacaaagaagttataagaaattaacataaaagctcacacagaacaaaacctaatttctacctgtttttcaagtcaccc 7493113  T
Q  182 acaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc 280  Q
    ||| ||||||| |||||||||| |||| ||||   |||| || |||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||| |    
T  7493112 acactctcaataaatcctaagaaaaaacactaaaggaagctttttgatccttctaattgtgaaatctcactacccaaggtgtttacaatgtttcccaatc 7493013  T
Q  281 cagaagaatctcactacgaagacactcaaccctaaag 317  Q
    ||  |||| |||||||| ||  | |||||||||||||    
T  7493012 caagagaacctcactacaaatgctctcaaccctaaag 7492976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 89 - 351
Target Start/End: Complemental strand, 5990594 - 5990333
Alignment:
Q  89 actaatatgaaagtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcacccacaatc 187  Q
    ||||| |||||||||||| ||||| ||||  | ||||||||||||||||||| ||||||||  |||| ||||  ||||||||||||||||||||||| |     
T  5990594 actaagatgaaagtgatacaaagatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcacccatttttcaagtcacccacactt 5990495  T
Q  188 tcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaag 286  Q
    ||||||||||||||||||||| ||||    ||| || |||| | ||| |||||||||||||||| | ||||| |||||| ||||||||||||||||  ||    
T  5990494 tcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttcccaacccaagag 5990395  T
Q  287 aatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    || |||||||  |||||||||||||||||||| |||  |||| || ||| |||||||||||||||    
T  5990394 aacctcacta--aagacactcaaccctaaagttaccgtctttgta-tttccaagtttctctctct 5990333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 23799697 - 23799368
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| || ||||||||| |||||| || ||||||||||  ||||||    
T  23799697 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atttggaggagagagcagccctccaatccactatgatgaaa 23799599  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaat 196  Q
    ||| || |||   ||||  | ||||||||||| ||||| | | |||||||| ||||||||||||||||||||    |||||||||  || ||||  ||||    
T  23799598 gtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccattttgt--gtcacccactgtcacaatatgaat 23799501  T
Q  197 cctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcact 295  Q
    |||||| ||||| || |   |||| || ||||||||||||||||||||||||| |||| ||||||| ||| |||||| |||||||||  |||  ||| ||    
T  23799500 cctaagggaaaacacaaaaggaagctttttgatccttccaatggtgaaatctccctactcaaggtgtttacaatgttccccaacccaagagatcctctct 23799401  T
Q  296 acgaagacactcaaccctaaagtgacctccttt 328  Q
    || |||||||||||||||||||| |||||||||    
T  23799400 acaaagacactcaaccctaaagttacctccttt 23799368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 12 - 333
Target Start/End: Complemental strand, 26403339 - 26403013
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||  ||||||||| || |||     
T  26403339 aacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 26403241  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaa 207  Q
      |||||   ||||||||||| |||||   | |||||||| ||||||||||||||||||||    ||||| |||  || ||||  ||||| |||||||||    
T  26403240 gagttataggaaattagcttacaagcttgcacaagaacaagacctaatttctacccattttgt--gtcactcactctcacaatatgaatcataagagaaa 26403143  T
Q  208 atactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaagaca 304  Q
    | || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||  |||| |||||||| ||||||    
T  26403142 acacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagaca 26403043  T
Q  305 ctcaaccct-aaagtgacctcctttttatt 333  Q
    ||||||||| ||||| ||||||||| ||||    
T  26403042 ctcaaccctaaaagttacctcctttgtatt 26403013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 5702592 - 5702272
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| |||||| |||||||||||| |||| | ||||| || ||| ||||| |||| | || |||||| |||  ||||||||| || |||     
T  5702592 aacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaa 5702494  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaaa-cctaatttctacccatttttcaagtcacccacaatctcaat---gaatcctaagagaa 206  Q
      ||||  | ||||||||||| ||||| | | |||| |||| |||||||||||||||||||   ||||||||||| |||||||   ||||||||||||||    
T  5702493 gagttacaagaaattagcttataagcttacacaagagcaaaacctaatttctacccattttg--agtcacccacactctcaataatgaatcctaagagaa 5702396  T
Q  207 aat-actatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagaca 304  Q
    ||  || |   |||| || |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||  |||  |||||||| ||||||    
T  5702395 aaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagagatcctcactacaaagaca 5702296  T
Q  305 ctcaaccctaaagtgacctccttt 328  Q
    |||||||||||||| |||||||||    
T  5702295 ctcaaccctaaagttacctccttt 5702272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 143 - 328
Target Start/End: Complemental strand, 4696585 - 4696400
Alignment:
Q  143 aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggt 240  Q
    |||||||| ||||||||||||||||||||    |||||||||| ||||| ||||||||||||||||| || |   |||| || |||||| ||||||||||    
T  4696585 aagaacaagacctaatttctacccattttgt--gtcacccacactctcattgaatcctaagagaaaacacaaaaggaagctttttgatctttccaatggt 4696488  T
Q  241 gaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||| | |||||||    
T  4696487 gaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctccttt 4696400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 4 - 328
Target Start/End: Original strand, 28307541 - 28307867
Alignment:
Q  4 aagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtg 103  Q
    ||||| |||| |||||| |||| |||| | |||||||||||| |||  | |||||| ||||| |  || ||||||||| ||||||||||| ||| ||||     
T  28307541 aagaatgaaataaacacgccaagattggtaacccagttcggtccaaaatgacctac-tctggggatgagagcagctctccaatccactaagatggaagta 28307639  T
Q  104 atataaagaggttatgaaaaattag-cttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaa 201  Q
    ||| | |  |||||  | |||||||  ||||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||| ||||| ||||||||||    
T  28307640 atacacatgggttacaagaaattagttttaaaagctcataaagaacaagacctactttctacacatttctcaagtcacccacactctcactgaatcctaa 28307739  T
Q  202 gagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaa 300  Q
     |||||| || |    ||| || || ||||||||||| ||||||||||||||||||||||| | | |||||||||||||| |  |||| |   |||| ||    
T  28307740 aagaaaacacaaaagaaagcttttttatccttccaattgtgaaatctcactacccaaggtgttaacaatgtttcccaacctaagagaaccgtgctacaaa 28307839  T
Q  301 gacactcaaccctaaagtgacctccttt 328  Q
    |||||||||| ||||||| |||||||||    
T  28307840 gacactcaactctaaagttacctccttt 28307867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 224 - 377
Target Start/End: Complemental strand, 9054316 - 9054166
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| || |||||||| |||||||| ||||    
T  9054316 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgttttccaacccaagagaatctcactacaaaaacactcaatcctaaagttacct 9054217  T
Q  324 cctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaa 377  Q
      ||| || ||| ||||||  |||||| ||||  ||||||||||||||||||||    
T  9054216 tatttgta-tttccaagtt--tctctccctaaatcacacacaaaacatgaagaa 9054166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 12 - 318
Target Start/End: Original strand, 6127208 - 6127520
Alignment:
Q  12 aacaaacacaccaa-tattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaa 110  Q
    |||||||||| ||| ||||||| || ||||||||| |||| | ||||| || ||| | ||| ||||||||| ||||||||||  ||||||||| || |||    
T  6127208 aacaaacacatcaaatattgttgactcagttcggtccaatatgaccta-atttggggaagagagcagctctccaatccactatgatgaaagtgttacaaa 6127306  T
Q  111 gaggttatgaaaaattagcttaaaagctcataaa-gaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat---gaatcctaagaga 205  Q
       ||||  | ||||||||||| ||||| | ||| |||||| ||||||||||||||||||||    |||||||||| |||||||   |||||||||||||    
T  6127307 agagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagaga 6127404  T
Q  206 aaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaaga 302  Q
    ||| || |    ||| || ||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||  ||  |||| |||||||| ||||    
T  6127405 aaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaaatgtttacaatgtttcccaaccctcaagagaacctcactacaaaga 6127504  T
Q  303 cactcaaccctaaagt 318  Q
    ||||||||||| ||||    
T  6127505 cactcaaccctcaagt 6127520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 7412316 - 7412645
Alignment:
Q  1 tgaaagaaggaaacaaacacacca---atattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatg 97  Q
    |||||||||||| |||||||||||   | |||||| |||||||||||| |||| | ||||| || ||| ||||| ||||||||| ||||||||||  |||    
T  7412316 tgaaagaaggaa-caaacacaccatgaaaattgttgacccagttcggtccaatatgaccta-atatgggggagagagcagctctccaatccactatgatg 7412413  T
Q  98 aaagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--- 192  Q
    |||||| || |||||| |||  | ||| || |||  ||||| | | |||||||| ||||||||||||||||||| |   ||  |||||  |||||||       
T  7412414 aaagtgttacaaagag-ttacaagaaaataacttgcaagcttacacaagaacaagacctaatttctacccatttgt---gtttcccactctctcaataat 7412509  T
Q  193 gaatcctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctc 292  Q
    ||| |||||||||| | |  |   |||| | ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||    
T  7412510 gaaccctaagagaagacataaaaggaagcttttgatcctttcaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctc 7412609  T
Q  293 actacgaagacactcaaccctaaagtgacctccttt 328  Q
     |||| |||||||||||||||||||| |||||||||    
T  7412610 tctacaaagacactcaaccctaaagttacctccttt 7412645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 4456229 - 4456333
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  ||||||||  ||||||||||||||||||| ||||    
T  4456229 ttgatccttctaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacagagacactcaaccctaaagttacct 4456328  T
Q  324 ccttt 328  Q
    |||||    
T  4456329 ccttt 4456333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 19175650 - 19175546
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |||  |||  |||||||| |||||||||||||||||||| ||||    
T  19175650 ttgatccttccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatcctcactacaaagacactcaaccctaaagttacct 19175551  T
Q  324 ccttt 328  Q
    |||||    
T  19175550 ccttt 19175546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 6813659 - 6813844
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaa 99  Q
    |||||||| | |||||||| |||||  |||||| |||||||||||| |||| ||||||||| || | ||||| ||||||||| ||||||| ||| |||||    
T  6813659 tgaaagaaaggaacaaacataccaaagattgttaacccagttcggtccaatataacctaca-ctaggggagagagcagctctccaatccaataagatgaa 6813757  T
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaa-cctaattt-ctacccatttttcaagtcacccaca 184  Q
    ||||| | |||| |||||  | ||||||||||  ||||||| |||||||||| |||||||| |||||||||||||||||||| ||||    
T  6813758 agtgacacaaaggggttacaagaaattagcttgcaagctcacaaagaacaaaacctaattttctacccatttttcaagtcactcaca 6813844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 153 - 391
Target Start/End: Complemental strand, 13204751 - 13204524
Alignment:
Q  153 ctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcact 251  Q
    ||||||| |||||||||||||| ||||| ||| ||||||||||||||| ||||||||| ||  | ||| || ||||| || |||| ||||||||||||||    
T  13204751 ctaatttttacccatttttcaattcacctacactctcaatgaatcctatgagaaaatattaaataaagctttttgattctcccaacggtgaaatctcact 13204652  T
Q  252 acccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    |||||||||| ||| |||         ||||  |||| |||| ||| |||||| | || | |||||| ||||||||| || ||| ||||||  |||||||    
T  13204651 acccaaggtgtttacaat---------cccaagagaacctcattacaaagacatttaaacataaagttacctcctttgta-tttccaagtt--tctctct 13204564  T
Q  352 ctaagccacacacaaaacatgaagaataaaaccttatata 391  Q
    ||||||||||||||||||||||||||| || | |||||||    
T  13204563 ctaagccacacacaaaacatgaagaatgaagcattatata 13204524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 1261846 - 1261742
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||| |||  |||    
T  1261846 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 1261747  T
Q  324 ccttt 328  Q
    |||||    
T  1261746 ccttt 1261742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 8863730 - 8863563
Alignment:
Q  16 aacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaa-agtgatataaagagg 114  Q
    |||||| ||||||||||| |||||||||||||||  |||||||| ||||  ||| |||| | |||||  ||||||||  |  || ||||||| |||||||    
T  8863730 aacacatcaatattgttttcccagttcggttcaaaataacctac-tctgatggaaatagtaactctttgatccactatgagaaagagtgatacaaagagg 8863632  T
Q  115 ttatgaaaaattagcttaaaagctcataaagaacaaacct-aatttctacccatttttcaagtcacccaca 184  Q
    |||  | |||||| |||||||||||| |  |||||||||| ||||||||||||||||||||||||| ||||    
T  8863631 ttacaagaaattaacttaaaagctcaca--gaacaaaccttaatttctacccatttttcaagtcactcaca 8863563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 31071121 - 31071035
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaac 310  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||  |||  |||||||| ||||||||||||    
T  31071121 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9765940 - 9765849
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaat-attgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccacta 92  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| ||||||||| ||||||||||    
T  9765940 tgaaagaagggaacaaacacaccaatgattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagctctccaatccacta 9765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 26288095 - 26288185
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaacccta 314  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||| ||  ||| |||| |||| |||||| |||||||||    
T  26288095 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaacccta 26288185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 26301352 - 26301442
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaacccta 314  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||| ||  ||| |||| |||| |||||| |||||||||    
T  26301352 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaacccta 26301442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 26313346 - 26313436
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaacccta 314  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||| ||  ||| |||| |||| |||||| |||||||||    
T  26313346 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaacccta 26313436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 31513340 - 31513240
Alignment:
Q  108 aaagaggttatgaaaaattagcttaaaagctcataaagaacaaacctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaa 207  Q
    ||||||||||  |||||||||||||     ||| ||||||||||||||||||||||| ||||| | ||||| ||||| || |||||||||||||||||||    
T  31513340 aaagaggttacaaaaaattagcttat----tcacaaagaacaaacctaatttctacctatttt-cgagtcatccacactcacaatgaatcctaagagaaa 31513246  T
Q  208 atacta 213  Q
    | ||||    
T  31513245 acacta 31513240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 34477241 - 34477135
Alignment:
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacctaatttctacccatttttcaagtcacccacaatctcaatgaatcct 199  Q
    ||||||| ||||||||||  | |||||| |||| || |||| |||||||||  |||||||| |||||||||||||||||| || |  | ||||||||||     
T  34477241 agtgatacaaagaggttaaaagaaattaacttacaaactcacaaagaacaa--ctaatttcgacccatttttcaagtcactcaaatccacaatgaatcca 34477144  T
Q  200 aagagaaaa 208  Q
    |||||||||    
T  34477143 aagagaaaa 34477135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 4731629 - 4731532
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    |||||||||| ||| ||||||||||||||||  |||| |||    | ||||| |||||||||||||| |||||| ||| |||||||||||||||||||||    
T  4731629 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcc-tttgatttttcaagtttctctctct 4731532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 33037677 - 33037608
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| ||||||||||||||||||||    
T  33037677 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacgaagacactcaaccct 33037608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 4696705 - 4696617
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaag 101  Q
    |||||||||||||| |||||| |||||||||| | |||| | ||||| |||||| ||||| |||||| || ||||||||||  |||||||    
T  4696705 aacaaacacaccaagattgttgacccagttcgatccaatatgaccta-atctgggggagagagcagccctccaatccactatgatgaaag 4696617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 4759944 - 4759874
Alignment:
Q  246 ctcactacccaaggtgattataatg---tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||   ||||||||||||  ||| |||| |||| |||||||||||||||    
T  4759944 ctcactacccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccct 4759874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 19491817 - 19491853
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  19491817 aagctcacaaagaacaaacctaatttctacccatttt 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 40328829 - 40328793
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| |||||||||||||||||||||||||||||    
T  40328829 aagctcacaaagaacaaacctaatttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 528
Target Start/End: Complemental strand, 40320851 - 40320784
Alignment:
Q  461 tacaatacttgaacttatctcctgcatcgtgttatgttgcctctgcattgtgccacgatttttccagt 528  Q
    |||||||||||  ||||||||||||||||||  | ||| |  || |||||||||||||||||||||||    
T  40320851 tacaatacttgctcttatctcctgcatcgtgccacgttcctcctacattgtgccacgatttttccagt 40320784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 374
Target Start/End: Complemental strand, 9765720 - 9765600
Alignment:
Q  252 acccaaggtgattataatgtttcccaacccagaaga--atctcactacgaagacactcaaccctaaagtgacctcctttttatttttcaagtttctctct 349  Q
    |||||||||| ||| |||||||||||||||  ||||  | |||||| | ||||||||||||||| |||| ||||||||| || ||  ||||||  |||||    
T  9765720 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcact-caaagacactcaaccctcaagttacctcctttgta-ttcccaagtt--tctct 9765625  T
Q  350 ctctaagccacacacaaaacatgaa 374  Q
    ||| ||||||||| ||||| |||||    
T  9765624 ctcaaagccacactcaaaaaatgaa 9765600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 10689009 - 10688940
Alignment:
Q  246 ctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||    
T  10689009 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccct 10688940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 33503897 - 33503783
Alignment:
Q  67 ggagatagcagctcttcaatccactaatatgaaagtgatat-aaagaggttatgaaaaattagcttaaaagctcataaagaacaa-acctaatttctacc 164  Q
    ||||| ||||||||||||||||||||  |    |||||||  ||||||||||  | ||||||||| | |||| |  |||| |||| ||||||||||||||    
T  33503897 ggagagagcagctcttcaatccactatgaaatgagtgataccaaagaggttaaaagaaattagctcacaagccctcaaagcacaatacctaatttctacc 33503798  T
Q  165 catttttcaagtcac 179  Q
    |||||||||||||||    
T  33503797 catttttcaagtcac 33503783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 42435109 - 42435147
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttttc 172  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  42435109 aagctcacaaagaacaaccctaatttctacccatttttc 42435147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 1292581 - 1292617
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  1292581 aagctcacaaagaacaaacttaatttctacccatttt 1292617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 3303788 - 3303824
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  3303788 aagctcacaaagaacaaacttaatttctacccatttt 3303824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 9765795 - 9765759
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  9765795 aagctcacaaagaacaaccctaatttctacccatttt 9765759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 10929849 - 10929813
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  10929849 aagctcacaaagaacaaacataatttctacccatttt 10929813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 27811328 - 27811292
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  27811328 aagctcacaaagaacaaccctaatttctacccatttt 27811292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 30143390 - 30143354
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  30143390 aagctcacaaagaacaaccctaatttctacccatttt 30143354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 36979605 - 36979673
Alignment:
Q  246 ctcactacccaaggtgattataatg-tttcccaacccagaagaatctcactacgaagacactcaaccct 313  Q
    |||||||||||||||||||| |||| |||||||||| |  |||  ||| |||| |||||||||||||||    
T  36979605 ctcactacccaaggtgattacaatgttttcccaacctaagagacactctctacaaagacactcaaccct 36979673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 40221795 - 40221759
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  40221795 aagctcacaaagaacaaccctaatttctacccatttt 40221759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 5660 - 5990
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||||| |||| | ||||| |||||| ||||| |||||| |||||||||||||  ||||||    
T  5660 tgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccta-atctgggggagagagcagcccttcaatccactatgatgaaa 5758  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatga---a 195  Q
    ||| || |||   | ||  | ||||||||||| ||||| | | |||||||| || |||||||||| ||||||    |||||||||| |||||||||   |    
T  5759 gtgttacaaaagagatacaagaaattagcttataagcttacacaagaacaagacttaatttctactcattttgt--gtcacccacactctcaatgatgaa 5856  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    ||||||||||||| || |   |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  |||  |||||    
T  5857 tcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcac 5956  T
Q  295 tacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||| ||||||||||||| |||||| |||||||||    
T  5957 tacaaagacactcaaccataaagttacctccttt 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 2469 - 2794
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | |||||||||||||| |||||| |||||||||| | |||| | ||||| |||||| ||||| |||||| || ||||||||||  ||||||    
T  2469 tgaaagaaaggaacaaacacaccaagattgttgacccagttcgctccaatatgaccta-atctgggggagacagcagccctccaatccactatgatgaaa 2567  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatga---a 195  Q
    ||| || |||    |||| | ||||||||||| ||||| | | |||||||| | ||||||||||||||||||    |||||||||| |||||||||   |    
T  2568 gtgttacaaaagaattataagaaattagcttataagcttacacaagaacaagaactaatttctacccattttgt--gtcacccacactctcaatgatgaa 2665  T
Q  196 tcctaagagaaaatactatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcac 294  Q
    |||||||| |||| || |   |||| || |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||  |||  |||||    
T  2666 tcctaagataaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacgcaaggtgtttacaatgtttcccaacccaagagatcctcac 2765  T
Q  295 tacgaagacactcaaccctaaagtgacct 323  Q
    ||| |||| ||| ||||||||||| ||||    
T  2766 tacaaagaaacttaaccctaaagttacct 2794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 224 - 357
Target Start/End: Complemental strand, 133175 - 133044
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| |||| |||||||||||||||  |||    
T  133175 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttccct 133076  T
Q  324 cctttttatttttcaagtttctctctctctaagc 357  Q
    ||||| ||   | ||||||||||||||| |||||    
T  133075 cctttgta--atccaagtttctctctctttaagc 133044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 81; Significance: 9e-38; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 44082 - 43753
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaata--ttgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatga 98  Q
    |||||||||||| |||||||||||| |  ||||| |||||||||||| |||| | | |||  ||||| ||||| ||||||||| ||||||||||  ||||    
T  44082 tgaaagaaggaa-caaacacaccaaaagattgttgacccagttcggtccaatatgatctat-tctgggggagagagcagctctccaatccactatgatga 43985  T
Q  99 aagtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccattt---ttcaagtcacccacaatctcaatg 193  Q
    ||||| || |||||| |||  | ||| ||||||  ||||| ||| |||||||| |||||||||||||||||||   ||| | || | | ||||   ||||    
T  43984 aagtgttacaaagag-ttacaagaaaatagcttgcaagcttatacaagaacaagacctaatttctacccatttgtgttccactctctctcaat---aatg 43889  T
Q  194 aatcctaa-gagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctc 292  Q
    || ||||| ||||| | || |   |||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||  |||    
T  43888 aaccctaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctc 43789  T
Q  293 actacgaagacactcaaccctaaagtgacctccttt 328  Q
    ||||| |||||||||||||||||||| |||||||||    
T  43788 actacaaagacactcaaccctaaagttacctccttt 43753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 36728 - 36624
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  |||  |||||||| |||||||||||||||||||| ||||    
T  36728 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 36629  T
Q  324 ccttt 328  Q
    |||||    
T  36628 ccttt 36624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 85671 - 85988
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||| | | |||||| ||||||||| || |||| | ||||| |||||| ||||| ||| ||||| |||||||| |  ||||||||| || ||||    
T  85671 aacaaacacatctagattgttgacccagttcagtccaatatgaccta-atctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaag 85769  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaat--gaatcctaagagaaa 207  Q
    || |||  | ||||||||||||||||| | | |||| ||| ||||||||||||||||||||    ||| |||||   | ||||  |||| ||||||||||    
T  85770 ag-ttacaagaaattagcttaaaagcttacacaagagcaagacctaatttctacccattttgt--gtctcccactcccacaatatgaattctaagagaaa 85866  T
Q  208 at-actatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacact 306  Q
    |  || |   |||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||  |||  |||||||| ||||||||    
T  85867 aacacaaaaggaagtttttgatccttccaatggtgaaatctcactacccaaagtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 85966  T
Q  307 caaccctaaagtgacctccttt 328  Q
    |||||||||||| |||||||||    
T  85967 caaccctaaagttacctccttt 85988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 12 - 377
Target Start/End: Original strand, 10717 - 11084
Alignment:
Q  12 aacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaagtgatataaag 111  Q
    |||||||||||||| ||| || |||||||||||| |||| | ||||| || ||| ||||| ||||||||| ||||||||||| ||||||||| || |||     
T  10717 aacaaacacaccaagattattgacccagttcggtccaatatgaccta-atttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaa 10815  T
Q  112 aggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctca----atgaatcctaagaga 205  Q
      ||||  | ||||||| ||| ||||| | | |||||||| |||||||||||| | |||||    |||||||||  |||||    |||||||||||||||    
T  10816 gagttacaagaaattagtttacaagcttacacaagaacaagacctaatttctatctattttgt--gtcacccac--tctcatgatatgaatcctaagaga 10911  T
Q  206 aaatactattt-gaag-ttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacc--cagaagaatctcactacgaag 301  Q
    ||| |  |    |||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||  |||| |||||||| |||    
T  10912 aaacagaaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaag 11011  T
Q  302 acactcaaccctaaagtgacctcctttttatttttcaagtttctctctctctaagccacacacaaaacatgaagaa 377  Q
    |||||||||| |||||| ||||||||| || ||   |||||  |||||||| |||| |||||||||| ||||||||    
T  11012 acactcaaccataaagttacctcctttgta-ttccaaagtt--tctctctcaaagcgacacacaaaagatgaagaa 11084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 227 - 328
Target Start/End: Complemental strand, 8310 - 8209
Alignment:
Q  227 atccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcct 326  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  |||||||| ||||||||||||||||||||  ||||||    
T  8310 atccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcct 8211  T
Q  327 tt 328  Q
    ||    
T  8210 tt 8209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 351
Target Start/End: Original strand, 23636 - 23859
Alignment:
Q  129 cttaaaagctcataaagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcctaagagaaaatactatttgaag--ttatt 225  Q
    |||| ||||||| ||| ||||| | |||||||||||||||||| || ||||  |||| || |||||||||||||||||||| || |  ||| |  || ||    
T  23636 cttagaagctcacaaaaaacaagatctaatttctacccatttt-catgtcagacacactcacaatgaatcctaagagaaaacacaaaatgatgccttttt 23734  T
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacctcc 325  Q
     ||||||| |||||||| |||||||||||||||||||||| ||| ||| ||||||||  |||| |||||||  ||||| ||||||| |||||| ||||||    
T  23735 tatccttctaatggtgacatctcactacccaaggtgattacaattttttccaacccaatagaacctcactataaagacgctcaaccttaaagttacctcc 23834  T
Q  326 tttttatttttcaagtttctctctct 351  Q
     || ||  | ||||||||||||||||    
T  23835 attgta-atctcaagtttctctctct 23859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 45399 - 45504
Alignment:
Q  224 ttgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatctcactac-gaagacactcaaccctaaagtgacc 322  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||  |||  ||||||||  |||||| ||||||||||||| |||    
T  45399 ttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcacaacccaagagatcctcactacaaaagacattcaaccctaaagttacc 45498  T
Q  323 tccttt 328  Q
    ||||||    
T  45499 tccttt 45504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 14757 - 14942
Alignment:
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaac-aaacctaatttctacccatttttcaagtcacccacaatctcaa--tgaat 196  Q
    ||||||| |||||||||| || ||||||||||||||||||| ||||||| || |||| || ||||| ||||||||||||||||||| || |||  |||||    
T  14757 agtgatacaaagaggttacgagaaattagcttaaaagctcacaaagaactaaccctagttcctacctatttttcaagtcacccacactcacaaagtgaat 14856  T
Q  197 cctaagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgatta-taatgtttcccaaccca 282  Q
    |||||||||||| ||||   | |||| ||||| ||||||||  | ||||||||| ||| |||||  |||  ||||||||||||||||    
T  14857 cctaagagaaaacacta-aaggagtttttgatgcttccaataataaaatctcaccaccaaaggtatttacaaatgtttcccaaccca 14942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 17844 - 17740
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||| |||  |||    
T  17844 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccct 17745  T
Q  324 ccttt 328  Q
    |||||    
T  17744 ccttt 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 23937 - 23833
Alignment:
Q  226 gatccttccaatggtgaaatctcactacccaaggtgattataatg--tttcccaacccagaagaatctcactacgaagacactcaaccctaaagtgacct 323  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||  |||  ||| |||| |||||||||||||||| |||  |||    
T  23937 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccct 23838  T
Q  324 ccttt 328  Q
    |||||    
T  23837 ccttt 23833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 17240 - 17554
Alignment:
Q  1 tgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacctacatctggaggagatagcagctcttcaatccactaatatgaaa 100  Q
    |||||||| | | |||||||||||| |||||| ||||||||||||||||| | ||||| || |||   ||| |||| | || ||||||| ||  ||||||    
T  17240 tgaaagaaaggagcaaacacaccaaaattgttgacccagttcggttcaatatgaccta-atatgggaaagagagcaaccctccaatccattatgatgaaa 17338  T
Q  101 gtgatataaagaggttatgaaaaattagcttaaaagctcata-aagaacaa-acctaatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||| || |||   ||||  | ||||||||||| ||||| | | |||||||| |||||||||||||| |||||    ||||| |||| ||| |||||||||    
T  17339 gtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacctattttgt--gtcactcacactcttaatgaatcc 17436  T
Q  199 taagagaaaatactatttgaagttattgatccttccaatggtgaaatctcactacccaaggtgattataatgtttcccaacccagaagaatct-cactac 297  Q
    |||||||||| || |   |||||| ||||          |||||||||||||||||||||||| ||| |||||||||||| |||  || |||| ||||||    
T  17437 taagagaaaacacaaaaggaagtttttga----------ggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagag-atctccactac 17525  T
Q  298 gaagacactcaaccctaaagtgacctcct 326  Q
     ||||||||||||| |||||| |||||||    
T  17526 aaagacactcaaccgtaaagttacctcct 17554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 102516 - 102402
Alignment:
Q  100 agtgatataaagaggttatgaaaaattagcttaaaagctcataaagaacaaacc-taatttctacccatttttcaagtcacccacaatctcaatgaatcc 198  Q
    ||||||| ||||||||||  | |||||| |||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||| ||  ||| ||| |    
T  102516 agtgatacaaagaggttacaagaaattatcttaaaagctcacaaaaaacaaaccctaatttctacccatttttcaagtcacacacactcataataaattc 102417  T
Q  199 taagagaaaatacta 213  Q
     ||||||||| ||||    
T  102416 gaagagaaaacacta 102402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 114515 - 114464
Alignment:
Q  299 aagacactcaaccctaaagtgacctcctttttatttttcaagtttctctctct 351  Q
    ||||| |||||||||||||| |||||| ||| |||| ||||||||||||||||    
T  114515 aagaccctcaaccctaaagttacctcc-tttgatttctcaagtttctctctct 114464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 5791 - 5743
Alignment:
Q  285 agaatctcactacgaagacactcaaccctaaagtgacctcctttttatt 333  Q
    |||| |||||||| ||||||||||||||| |||| ||||||||| ||||    
T  5791 agaacctcactacaaagacactcaaccctcaagttacctcctttgtatt 5743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 80401 - 80437
Alignment:
Q  134 aagctcataaagaacaaacctaatttctacccatttt 170  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  80401 aagctcacaaagaacaaccctaatttctacccatttt 80437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University