View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1962_1D_low_17 (Length: 351)
Name: NF1962_1D_low_17
Description: NF1962_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1962_1D_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 2237556 - 2237838
Alignment:
| Q |
17 |
acatcaatggaaggactacttccccaaatggcagctccagcatatgctcctatctttccgttgttatccggtaacatatgggttttccataagatatcgc |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
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| T |
2237556 |
acatcaatggaaggactacttccccaaatggcagctccagcatatgctcctatctttccgttgttatccggtaacatataggttttccataagatgtcgc |
2237655 |
T |
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| Q |
117 |
cggtttgagcatcaagttttacaaggcttccacggaatatgcaacaatctttaatggtcgcaccttcttcaagtgaagatgttccaacgtagtaactcct |
216 |
Q |
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||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |
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| T |
2237656 |
cggtttgagcatcaagttttacaagacttccacgaaatatgcaacaatctttaatggttgcaccttcttctagtgaagatgttccaacatagtaactcct |
2237755 |
T |
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| Q |
217 |
atattttgagagtttagcacaattatacgtcgatataaaagggtcaaaaagtaaaaaggaatgagtgataatccaaaacttga |
299 |
Q |
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|||| |||| ||||||||| |||||||| | |||||||| ||||| ||||| || ||||||||| ||||| || |||||||| |
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| T |
2237756 |
atatattgaaagtttagcataattatactttgatataaacgggtcgaaaagaaagaaggaatgaatgatagccccaaacttga |
2237838 |
T |
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