View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1962_low_3 (Length: 592)

Name: NF1962_low_3
Description: NF1962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1962_low_3
NF1962_low_3
[»] chr8 (50 HSPs)
chr8 (15-352)||(22511884-22512220)
chr8 (15-301)||(22519184-22519469)
chr8 (15-354)||(37189780-37190118)
chr8 (95-354)||(42891584-42891840)
chr8 (95-346)||(22926564-22926816)
chr8 (178-351)||(22921850-22922023)
chr8 (95-354)||(42890311-42890561)
chr8 (178-346)||(22520799-22520967)
chr8 (447-592)||(21940665-21940810)
chr8 (177-354)||(6845249-6845426)
chr8 (186-334)||(23570516-23570665)
chr8 (453-592)||(6094129-6094268)
chr8 (449-592)||(22171491-22171632)
chr8 (453-592)||(24642655-24642794)
chr8 (449-592)||(28554885-28555028)
chr8 (453-580)||(24636860-24636987)
chr8 (211-334)||(23573515-23573639)
chr8 (145-267)||(2189689-2189810)
chr8 (265-354)||(18180770-18180859)
chr8 (107-267)||(2687742-2687901)
chr8 (116-267)||(26374900-26375050)
chr8 (95-219)||(18180630-18180753)
chr8 (107-267)||(16598249-16598409)
chr8 (178-267)||(18468649-18468737)
chr8 (355-411)||(21940573-21940629)
chr8 (355-411)||(22070108-22070164)
chr8 (102-267)||(24578702-24578866)
chr8 (178-263)||(24731231-24731316)
chr8 (354-411)||(22171395-22171452)
chr8 (354-407)||(24642555-24642608)
chr8 (355-411)||(6094031-6094087)
chr8 (354-411)||(28554790-28554847)
chr8 (288-354)||(26150602-26150669)
chr8 (177-264)||(24731035-24731122)
chr8 (459-518)||(38232512-38232570)
chr8 (468-526)||(2375027-2375085)
chr8 (265-345)||(15081494-15081572)
chr8 (264-352)||(38082173-38082260)
chr8 (485-548)||(10920234-10920297)
chr8 (477-547)||(32872948-32873019)
chr8 (264-355)||(4360891-4360983)
chr8 (230-267)||(2609547-2609584)
chr8 (265-346)||(9295256-9295335)
chr8 (188-267)||(14130165-14130244)
chr8 (212-267)||(20693799-20693855)
chr8 (178-237)||(26378031-26378089)
chr8 (125-267)||(31072069-31072216)
chr8 (354-408)||(2374946-2375000)
chr8 (230-267)||(2689146-2689183)
chr8 (355-392)||(24636605-24636642)
[»] chr5 (32 HSPs)
chr5 (1-354)||(21848788-21849147)
chr5 (178-354)||(40778786-40778962)
chr5 (447-592)||(24695528-24695673)
chr5 (447-592)||(18569925-18570070)
chr5 (449-592)||(19714560-19714703)
chr5 (453-592)||(19707280-19707419)
chr5 (114-267)||(19497240-19497393)
chr5 (447-556)||(39537962-39538071)
chr5 (452-592)||(27347540-27347679)
chr5 (453-592)||(22547078-22547217)
chr5 (354-411)||(24695709-24695766)
chr5 (451-550)||(17285836-17285935)
chr5 (453-556)||(31886537-31886640)
chr5 (112-176)||(9868337-9868400)
chr5 (355-411)||(19714742-19714798)
chr5 (264-346)||(19677217-19677298)
chr5 (353-411)||(19707462-19707520)
chr5 (355-411)||(27347722-27347778)
chr5 (178-267)||(18252416-18252504)
chr5 (178-264)||(8456380-8456465)
chr5 (451-530)||(17299009-17299088)
chr5 (188-267)||(22440858-22440936)
chr5 (351-411)||(18570108-18570168)
chr5 (202-267)||(492567-492633)
chr5 (473-563)||(33477389-33477479)
chr5 (355-410)||(39537870-39537925)
chr5 (178-267)||(26140343-26140431)
chr5 (265-351)||(35160815-35160899)
chr5 (178-209)||(21844437-21844468)
chr5 (497-565)||(11479420-11479489)
chr5 (212-267)||(9868438-9868494)
chr5 (513-557)||(18807131-18807175)
[»] chr7 (67 HSPs)
chr7 (15-280)||(13885995-13886261)
chr7 (15-300)||(1220277-1220562)
chr7 (178-354)||(13882686-13882862)
chr7 (447-592)||(29327784-29327929)
chr7 (447-592)||(11536124-11536269)
chr7 (447-592)||(11543042-11543187)
chr7 (178-325)||(859156-859303)
chr7 (178-325)||(1217160-1217307)
chr7 (449-592)||(15152445-15152588)
chr7 (449-592)||(12750828-12750971)
chr7 (449-592)||(18561009-18561152)
chr7 (449-592)||(15148144-15148287)
chr7 (449-592)||(18257904-18258047)
chr7 (235-354)||(13886245-13886364)
chr7 (453-592)||(12738542-12738681)
chr7 (67-267)||(1883489-1883689)
chr7 (127-267)||(1365672-1365810)
chr7 (145-267)||(1874538-1874660)
chr7 (115-219)||(4300525-4300629)
chr7 (264-354)||(4303363-4303453)
chr7 (264-355)||(31577269-31577360)
chr7 (453-592)||(13392157-13392295)
chr7 (178-263)||(4888686-4888770)
chr7 (354-411)||(11543223-11543280)
chr7 (116-267)||(24840143-24840287)
chr7 (355-411)||(2653275-2653331)
chr7 (355-411)||(12738443-12738499)
chr7 (200-267)||(27309636-27309704)
chr7 (453-540)||(39111819-39111905)
chr7 (354-411)||(11536305-11536362)
chr7 (354-411)||(12750732-12750789)
chr7 (354-411)||(15152349-15152406)
chr7 (188-267)||(1786683-1786763)
chr7 (354-410)||(29327689-29327745)
chr7 (469-592)||(2364917-2365040)
chr7 (186-244)||(29175780-29175838)
chr7 (355-411)||(15148049-15148105)
chr7 (212-267)||(27142666-27142722)
chr7 (202-264)||(5934607-5934670)
chr7 (480-574)||(7396221-7396316)
chr7 (205-267)||(3778735-3778797)
chr7 (178-267)||(7803031-7803120)
chr7 (134-263)||(8916334-8916462)
chr7 (202-267)||(11000849-11000915)
chr7 (202-263)||(30217819-30217879)
chr7 (354-410)||(13392029-13392085)
chr7 (104-219)||(22572344-22572459)
chr7 (264-320)||(22572475-22572530)
chr7 (521-564)||(3132748-3132791)
chr7 (264-354)||(5678299-5678388)
chr7 (264-354)||(5703351-5703440)
chr7 (202-267)||(1369805-1369871)
chr7 (202-267)||(11228721-11228787)
chr7 (211-263)||(1753630-1753683)
chr7 (497-562)||(10234179-10234244)
chr7 (355-411)||(18258087-18258143)
chr7 (206-260)||(8063831-8063885)
chr7 (313-354)||(4300470-4300511)
chr7 (270-354)||(4668258-4668342)
chr7 (211-267)||(11228981-11229038)
chr7 (447-479)||(2653207-2653239)
chr7 (355-411)||(18560913-18560969)
chr7 (205-267)||(6451776-6451839)
chr7 (266-320)||(32052989-32053041)
chr7 (287-346)||(32936869-32936926)
chr7 (15-52)||(1883737-1883774)
chr7 (202-267)||(35814871-35814936)
[»] chr2 (40 HSPs)
chr2 (116-354)||(27956093-27956330)
chr2 (95-346)||(2155887-2156139)
chr2 (178-354)||(27952318-27952494)
chr2 (117-356)||(31634015-31634254)
chr2 (447-592)||(21330310-21330455)
chr2 (177-334)||(22011368-22011526)
chr2 (177-354)||(33655540-33655717)
chr2 (177-357)||(31636247-31636427)
chr2 (116-267)||(33051618-33051769)
chr2 (447-592)||(18796506-18796651)
chr2 (145-267)||(36647293-36647414)
chr2 (453-592)||(19692598-19692737)
chr2 (117-262)||(28737911-28738054)
chr2 (449-592)||(18619807-18619949)
chr2 (178-267)||(15129390-15129478)
chr2 (264-352)||(8781429-8781515)
chr2 (355-411)||(21330493-21330549)
chr2 (264-354)||(22264348-22264437)
chr2 (178-262)||(2165899-2165983)
chr2 (100-267)||(32163694-32163860)
chr2 (202-267)||(23457646-23457712)
chr2 (264-325)||(44675308-44675368)
chr2 (189-267)||(5171596-5171674)
chr2 (189-267)||(21772375-21772452)
chr2 (115-181)||(23456638-23456704)
chr2 (203-267)||(32161993-32162058)
chr2 (512-592)||(20977957-20978037)
chr2 (212-267)||(12966477-12966532)
chr2 (178-267)||(1518193-1518281)
chr2 (267-354)||(18725683-18725770)
chr2 (266-351)||(2165838-2165924)
chr2 (265-351)||(5841221-5841305)
chr2 (202-263)||(8294582-8294644)
chr2 (354-411)||(19692773-19692830)
chr2 (481-574)||(18822115-18822210)
chr2 (212-262)||(23456580-23456631)
chr2 (233-267)||(4184929-4184963)
chr2 (202-263)||(28737841-28737903)
chr2 (354-411)||(18796411-18796470)
chr2 (481-509)||(36270199-36270227)
[»] chr3 (79 HSPs)
chr3 (95-325)||(43306591-43306819)
chr3 (178-354)||(5128822-5128998)
chr3 (116-325)||(3068813-3069022)
chr3 (447-592)||(6110064-6110209)
chr3 (447-592)||(10572654-10572799)
chr3 (450-592)||(13211305-13211447)
chr3 (447-592)||(13248607-13248752)
chr3 (447-592)||(15600946-15601091)
chr3 (447-592)||(15607491-15607636)
chr3 (447-592)||(18640808-18640953)
chr3 (449-592)||(16482545-16482688)
chr3 (453-592)||(17781180-17781319)
chr3 (449-592)||(18522665-18522808)
chr3 (447-592)||(8490488-8490633)
chr3 (453-592)||(10579417-10579556)
chr3 (447-592)||(15357648-15357793)
chr3 (178-334)||(43303960-43304117)
chr3 (449-589)||(17200249-17200389)
chr3 (453-592)||(19089807-19089946)
chr3 (177-334)||(3063736-3063894)
chr3 (449-574)||(18519980-18520105)
chr3 (449-592)||(13516813-13516956)
chr3 (466-592)||(15342281-15342407)
chr3 (453-592)||(32056962-32057101)
chr3 (453-592)||(1647583-1647726)
chr3 (449-592)||(16200128-16200270)
chr3 (447-592)||(29924971-29925116)
chr3 (447-592)||(29974124-29974269)
chr3 (449-592)||(16200434-16200576)
chr3 (454-582)||(24253460-24253589)
chr3 (263-341)||(40593528-40593605)
chr3 (268-334)||(53012958-53013025)
chr3 (353-411)||(6109970-6110028)
chr3 (449-511)||(18534758-18534820)
chr3 (354-411)||(13248514-13248571)
chr3 (355-411)||(8490396-8490452)
chr3 (354-411)||(13211210-13211267)
chr3 (355-411)||(18640989-18641045)
chr3 (264-346)||(41218724-41218806)
chr3 (264-351)||(4580479-4580565)
chr3 (352-411)||(15607672-15607732)
chr3 (355-411)||(17136137-17136193)
chr3 (95-181)||(368791-368874)
chr3 (355-405)||(10579603-10579653)
chr3 (178-267)||(2472689-2472777)
chr3 (354-411)||(15351237-15351294)
chr3 (354-411)||(15357829-15357886)
chr3 (354-411)||(17200427-17200484)
chr3 (449-494)||(18510924-18510969)
chr3 (355-411)||(16482727-16482782)
chr3 (355-411)||(18519885-18519941)
chr3 (188-267)||(52708844-52708923)
chr3 (354-405)||(10572840-10572891)
chr3 (197-260)||(45168338-45168401)
chr3 (354-411)||(15601127-15601185)
chr3 (178-267)||(365593-365681)
chr3 (354-411)||(13516718-13516775)
chr3 (354-411)||(17781358-17781415)
chr3 (354-411)||(19089985-19090042)
chr3 (264-352)||(20398486-20398574)
chr3 (355-411)||(1647768-1647824)
chr3 (355-411)||(32057144-32057200)
chr3 (267-353)||(33620096-33620181)
chr3 (298-352)||(39913348-39913403)
chr3 (265-342)||(19949927-19950004)
chr3 (354-411)||(18510828-18510885)
chr3 (354-411)||(18522569-18522626)
chr3 (354-411)||(18534662-18534719)
chr3 (297-352)||(45168410-45168466)
chr3 (553-592)||(17136465-17136504)
chr3 (274-352)||(19795168-19795244)
chr3 (199-265)||(35908506-35908572)
chr3 (286-351)||(25857707-25857773)
chr3 (266-320)||(1151150-1151201)
chr3 (264-352)||(25340169-25340256)
chr3 (355-411)||(29924879-29924935)
chr3 (355-411)||(29974032-29974088)
chr3 (179-267)||(33175835-33175922)
chr3 (181-209)||(53013020-53013048)
[»] chr6 (55 HSPs)
chr6 (95-334)||(3535967-3536207)
chr6 (449-592)||(17684531-17684674)
chr6 (447-592)||(17691502-17691647)
chr6 (447-592)||(27381314-27381459)
chr6 (447-592)||(27471697-27471842)
chr6 (447-592)||(29308890-29309035)
chr6 (447-592)||(29315850-29315995)
chr6 (175-334)||(3542178-3542337)
chr6 (449-592)||(16566382-16566525)
chr6 (164-354)||(30049829-30050019)
chr6 (449-592)||(189039-189182)
chr6 (449-592)||(11651725-11651868)
chr6 (449-592)||(25537221-25537364)
chr6 (164-354)||(30052116-30052306)
chr6 (182-351)||(29340810-29340980)
chr6 (449-592)||(13359331-13359474)
chr6 (65-219)||(11190516-11190669)
chr6 (264-354)||(11190412-11190500)
chr6 (117-260)||(18718139-18718279)
chr6 (116-262)||(8048904-8049049)
chr6 (357-411)||(17691683-17691737)
chr6 (354-411)||(27381495-27381552)
chr6 (354-411)||(27471878-27471935)
chr6 (354-411)||(29308797-29308854)
chr6 (354-411)||(29315757-29315814)
chr6 (199-263)||(11658936-11659000)
chr6 (264-346)||(26571071-26571152)
chr6 (178-267)||(27822118-27822207)
chr6 (178-267)||(33615504-33615593)
chr6 (354-411)||(17684712-17684769)
chr6 (114-178)||(24443009-24443073)
chr6 (178-230)||(29342061-29342113)
chr6 (355-409)||(11651630-11651684)
chr6 (354-411)||(25537405-25537462)
chr6 (264-351)||(3565652-3565739)
chr6 (287-353)||(2339157-2339223)
chr6 (486-589)||(20553652-20553755)
chr6 (133-267)||(14238436-14238568)
chr6 (454-509)||(31258065-31258120)
chr6 (466-551)||(8509941-8510026)
chr6 (354-411)||(13359512-13359569)
chr6 (363-411)||(16566563-16566611)
chr6 (188-260)||(18727115-18727186)
chr6 (485-592)||(17850556-17850663)
chr6 (202-263)||(1127258-1127320)
chr6 (202-267)||(12882123-12882189)
chr6 (266-324)||(13645898-13645955)
chr6 (470-592)||(27925772-27925899)
chr6 (355-411)||(189221-189280)
chr6 (265-324)||(2939780-2939837)
chr6 (369-411)||(16394484-16394526)
chr6 (286-320)||(19232329-19232363)
chr6 (463-528)||(22259925-22259990)
chr6 (212-259)||(22873822-22873870)
chr6 (202-261)||(33215186-33215246)
[»] chr1 (54 HSPs)
chr1 (95-325)||(13443906-13444135)
chr1 (178-354)||(50857444-50857620)
chr1 (447-592)||(18252030-18252175)
chr1 (447-592)||(18532576-18532721)
chr1 (447-592)||(27131471-27131616)
chr1 (178-334)||(8931153-8931309)
chr1 (449-592)||(16359097-16359240)
chr1 (449-592)||(21171295-21171438)
chr1 (449-592)||(27310639-27310782)
chr1 (447-592)||(3855981-3856126)
chr1 (453-592)||(36816695-36816834)
chr1 (447-580)||(22657295-22657429)
chr1 (107-262)||(23987581-23987736)
chr1 (184-325)||(13441612-13441746)
chr1 (132-267)||(28660701-28660835)
chr1 (355-411)||(18251936-18251992)
chr1 (355-411)||(18532757-18532813)
chr1 (266-345)||(12486314-12486392)
chr1 (481-565)||(12006628-12006712)
chr1 (178-267)||(31915550-31915638)
chr1 (144-267)||(10925740-10925859)
chr1 (355-411)||(27310821-27310877)
chr1 (266-356)||(40804571-40804660)
chr1 (112-267)||(8967738-8967893)
chr1 (453-527)||(27277682-27277756)
chr1 (481-562)||(12014376-12014457)
chr1 (269-346)||(42071413-42071489)
chr1 (355-411)||(16359280-16359336)
chr1 (178-260)||(40058102-40058184)
chr1 (115-194)||(40804701-40804780)
chr1 (354-411)||(21171479-21171536)
chr1 (353-411)||(3856164-3856222)
chr1 (202-267)||(12944116-12944182)
chr1 (202-264)||(31913380-31913442)
chr1 (354-408)||(36816881-36816935)
chr1 (265-357)||(12033638-12033730)
chr1 (354-407)||(22657469-22657522)
chr1 (453-522)||(30720625-30720694)
chr1 (211-267)||(50713713-50713770)
chr1 (202-263)||(43681465-43681528)
chr1 (225-260)||(10927199-10927234)
chr1 (355-411)||(27131652-27131704)
chr1 (477-554)||(3403248-3403325)
chr1 (477-554)||(3443494-3443571)
chr1 (188-268)||(9031016-9031096)
chr1 (355-411)||(27277800-27277856)
chr1 (459-494)||(9918071-9918106)
chr1 (267-318)||(42646624-42646674)
chr1 (178-267)||(10928289-10928377)
chr1 (211-267)||(8221488-8221545)
chr1 (178-262)||(26981516-26981598)
chr1 (188-267)||(28661078-28661157)
chr1 (95-159)||(31913451-31913515)
chr1 (216-267)||(33152756-33152808)
[»] chr4 (79 HSPs)
chr4 (177-356)||(6659330-6659508)
chr4 (447-592)||(19926822-19926967)
chr4 (447-592)||(26970463-26970608)
chr4 (447-592)||(5707320-5707465)
chr4 (447-592)||(26963640-26963785)
chr4 (447-592)||(55612683-55612828)
chr4 (447-592)||(5713948-5714093)
chr4 (449-592)||(18262214-18262357)
chr4 (447-592)||(868597-868742)
chr4 (447-592)||(10621395-10621540)
chr4 (447-592)||(10628474-10628619)
chr4 (449-592)||(28393196-28393339)
chr4 (449-592)||(18269070-18269218)
chr4 (449-592)||(4426666-4426808)
chr4 (459-592)||(8845215-8845348)
chr4 (459-592)||(8858179-8858312)
chr4 (447-562)||(12357136-12357251)
chr4 (264-354)||(13085178-13085268)
chr4 (455-582)||(20311299-20311427)
chr4 (116-267)||(13991318-13991468)
chr4 (58-267)||(7723959-7724163)
chr4 (264-354)||(13086221-13086311)
chr4 (107-267)||(54700527-54700686)
chr4 (264-334)||(22716590-22716661)
chr4 (453-540)||(35223576-35223663)
chr4 (453-550)||(5668230-5668327)
chr4 (354-411)||(5713855-5713912)
chr4 (354-411)||(26963547-26963604)
chr4 (354-411)||(26970370-26970427)
chr4 (355-411)||(19927003-19927059)
chr4 (449-592)||(5616215-5616358)
chr4 (453-592)||(10677615-10677753)
chr4 (453-592)||(10891255-10891393)
chr4 (266-325)||(22691253-22691312)
chr4 (264-334)||(22988556-22988627)
chr4 (354-411)||(10621576-10621633)
chr4 (355-411)||(5707228-5707284)
chr4 (179-267)||(7723665-7723751)
chr4 (355-411)||(12357044-12357100)
chr4 (357-411)||(868507-868561)
chr4 (355-411)||(10628655-10628711)
chr4 (355-411)||(17142372-17142428)
chr4 (355-411)||(55612594-55612650)
chr4 (265-346)||(2053095-2053176)
chr4 (134-263)||(7634084-7634212)
chr4 (177-267)||(24667657-24667746)
chr4 (355-409)||(28393380-28393434)
chr4 (354-411)||(18268975-18269032)
chr4 (355-411)||(4426847-4426903)
chr4 (264-355)||(9596853-9596944)
chr4 (178-267)||(19935487-19935575)
chr4 (107-168)||(22691327-22691388)
chr4 (268-351)||(4053062-4053145)
chr4 (496-563)||(39074278-39074346)
chr4 (95-261)||(50515822-50515978)
chr4 (177-263)||(40206153-40206238)
chr4 (211-267)||(21433595-21433652)
chr4 (362-411)||(55992680-55992729)
chr4 (211-270)||(18689553-18689613)
chr4 (212-267)||(38888023-38888079)
chr4 (205-263)||(10494907-10494966)
chr4 (202-264)||(22486799-22486861)
chr4 (269-344)||(54239531-54239604)
chr4 (207-264)||(18657070-18657128)
chr4 (370-411)||(5668371-5668412)
chr4 (267-352)||(38223117-38223200)
chr4 (363-411)||(8845118-8845166)
chr4 (363-411)||(8858082-8858130)
chr4 (371-411)||(18262136-18262176)
chr4 (473-556)||(21454235-21454319)
chr4 (270-357)||(34949082-34949169)
chr4 (497-556)||(11161913-11161972)
chr4 (266-325)||(19684822-19684880)
chr4 (357-411)||(20311207-20311261)
chr4 (230-267)||(9260573-9260610)
chr4 (230-267)||(13990729-13990766)
chr4 (188-263)||(17254893-17254968)
chr4 (363-411)||(24699958-24700006)
chr4 (175-243)||(55139096-55139163)
[»] scaffold0234 (4 HSPs)
scaffold0234 (447-592)||(2383-2528)
scaffold0234 (447-592)||(11274-11419)
scaffold0234 (354-411)||(2564-2621)
scaffold0234 (354-411)||(11455-11512)
[»] scaffold0390 (4 HSPs)
scaffold0390 (447-592)||(6996-7141)
scaffold0390 (447-592)||(14012-14157)
scaffold0390 (354-411)||(7177-7234)
scaffold0390 (355-411)||(14193-14249)
[»] scaffold0220 (2 HSPs)
scaffold0220 (447-592)||(18288-18433)
scaffold0220 (355-411)||(18196-18252)
[»] scaffold0433 (2 HSPs)
scaffold0433 (447-592)||(7107-7252)
scaffold0433 (354-411)||(7014-7071)
[»] scaffold0186 (2 HSPs)
scaffold0186 (447-592)||(26052-26197)
scaffold0186 (354-410)||(26231-26287)
[»] scaffold0657 (2 HSPs)
scaffold0657 (447-592)||(993-1138)
scaffold0657 (355-411)||(901-957)
[»] scaffold0063 (2 HSPs)
scaffold0063 (449-592)||(5531-5674)
scaffold0063 (354-411)||(5435-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (449-592)||(230403-230545)
scaffold0008 (355-411)||(230584-230640)
[»] scaffold0110 (3 HSPs)
scaffold0110 (178-351)||(45262-45435)
scaffold0110 (158-251)||(46713-46806)
scaffold0110 (266-354)||(46792-46880)
[»] scaffold0240 (3 HSPs)
scaffold0240 (115-263)||(16051-16196)
scaffold0240 (124-264)||(14850-14988)
scaffold0240 (128-267)||(1658-1797)
[»] scaffold0531 (1 HSPs)
scaffold0531 (116-262)||(11527-11672)
[»] scaffold0090 (1 HSPs)
scaffold0090 (19-183)||(14920-15084)
[»] scaffold0176 (2 HSPs)
scaffold0176 (447-511)||(8446-8510)
scaffold0176 (354-411)||(8546-8603)
[»] scaffold0203 (1 HSPs)
scaffold0203 (354-411)||(23769-23826)
[»] scaffold0326 (2 HSPs)
scaffold0326 (354-411)||(16522-16579)
scaffold0326 (447-480)||(16615-16648)
[»] scaffold0054 (2 HSPs)
scaffold0054 (206-264)||(37714-37772)
scaffold0054 (214-267)||(49322-49375)
[»] scaffold0705 (1 HSPs)
scaffold0705 (354-411)||(41-98)
[»] scaffold0637 (1 HSPs)
scaffold0637 (355-411)||(8944-9000)
[»] scaffold0251 (2 HSPs)
scaffold0251 (265-354)||(8243-8331)
scaffold0251 (202-267)||(9702-9769)
[»] scaffold0330 (1 HSPs)
scaffold0330 (128-267)||(17640-17779)
[»] scaffold0565 (2 HSPs)
scaffold0565 (357-411)||(10202-10256)
scaffold0565 (466-497)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (355-391)||(1-37)
[»] scaffold0024 (1 HSPs)
scaffold0024 (202-267)||(145734-145800)
[»] scaffold0170 (1 HSPs)
scaffold0170 (354-407)||(5877-5930)
[»] scaffold0236 (1 HSPs)
scaffold0236 (199-263)||(16402-16466)
[»] scaffold0154 (1 HSPs)
scaffold0154 (287-320)||(28711-28744)
[»] scaffold0032 (1 HSPs)
scaffold0032 (476-548)||(92194-92267)


Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 15 - 352
Target Start/End: Original strand, 22511884 - 22512220
Alignment:
Q  15 gttgttgttgatgttgtcaatcttagccgtcaacgccgtcgactgatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaacc 114  Q
    |||| ||||||||||||||||||||||||| ||||||  |  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22511884 gttgatgttgatgttgtcaatcttagccgttaacgccaccatctaatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaacc 22511983  T
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaa 214  Q
    |||||||| ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  22511984 ggttgatctcccatggctgatc-cattaggaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagtgtagggttagcaagcgctaa 22512082  T
Q  215 acctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaa 314  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  22512083 acctaggtagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagtgacaaacctatcaaaataagggtttccgaaatccaccagaa 22512182  T
Q  315 ttgagagaaaatctcgaataattttattgaatcaaaaa 352  Q
    |||||||||||||||||||||||||||||||| |||||    
T  22512183 ttgagagaaaatctcgaataattttattgaataaaaaa 22512220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 15 - 301
Target Start/End: Original strand, 22519184 - 22519469
Alignment:
Q  15 gttgttgttgatgttgtcaatcttagccgtcaacgccgtcgactgatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaacc 114  Q
    |||| ||||||||||||||||||||||||| ||||||  |  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22519184 gttgatgttgatgttgtcaatcttagccgttaacgccaccatctaatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaacc 22519283  T
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaa 214  Q
    |||||||| ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  22519284 ggttgatctcccatggctgatc-cattaggaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagtgtagggttagcaagcgctaa 22519382  T
Q  215 acctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccg 301  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22519383 acctaggtagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagtgacaaacctatcaaaataagggtttccg 22519469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 15 - 354
Target Start/End: Complemental strand, 37190118 - 37189780
Alignment:
Q  15 gttgttgttgatgttgtcaatcttagccgtcaacgccgtcgactgatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaacc 114  Q
    |||| ||||||||||||||||||||| ||| ||||||  |  ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||      
T  37190118 gttgatgttgatgttgtcaatcttagtcgttaacgccaccatctgatctaagagagctttggcggccgcatttaaactgccaaattttgccctcataagt 37190019  T
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaa 214  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  37190018 ggttgatctcccatggctgatcacgttaggaaaagaacagaagaaatctgctctgataccaattgacgcagtacggaagcttagggttagcaagctctaa 37189919  T
Q  215 acctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccag-a 313  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |    
T  37189918 aactagatagaaaagaataagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataaggg-ttccgaaatccaccagaa 37189820  T
Q  314 attgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||||| ||||||||||||| | ||| ||||| |||||||    
T  37189819 attgaga-aaaatctcgaatattattaatgaataaaaaagt 37189780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 95 - 354
Target Start/End: Original strand, 42891584 - 42891840
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 194  Q
    |||| ||||||||||| | | ||||||| ||||||||||||| |||||| ||||| |  ||||||||||||| ||||||||||||||||| |||||||||    
T  42891584 caaactctgccctcgtcatcagttgatctcccatggctgatc-cgttaggaaaagta--ggagaaacctgctttgataccaactgacgcaatacggaagc 42891680  T
Q  195 gtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagg 294  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42891681 gtagggctagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagg 42891780  T
Q  295 gtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42891781 gtttccggaatccaccagaattgagagaaaatctcaaataattttattgaatcaaaaagt 42891840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 95 - 346
Target Start/End: Original strand, 22926564 - 22926816
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctg-atcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaag 193  Q
    ||||||||||||| || ||||||||||| || ||||||| ||||||||    |||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  22926564 caaattctgccctagtgaccggttgatctcctatggctggatcacgttcacgaaagaacaggggaaacctgctctgatgccaactgacgtagtacggaag 22926663  T
Q  194 cgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataag 293  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22926664 cgtagggttagaaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataag 22926763  T
Q  294 ggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaat 346  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  22926764 ggtttctggaatccaccagaattgagagaaaatctcgaatatttttattgaat 22926816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 178 - 351
Target Start/End: Original strand, 22921850 - 22922023
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22921850 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaataagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 22921949  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22921950 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaa 22922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 95 - 354
Target Start/End: Complemental strand, 42890561 - 42890311
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 194  Q
    |||| ||||||||||| | | ||||||| |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| |  | ||||    
T  42890561 caaactctgccctcgtcatcagttgatctcccatggctgatct-gttaggaaaagaacaggagaaacctgctctgataccaactgacgcaattag-aagc 42890464  T
Q  195 gtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagg 294  Q
    ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42890463 gtaggct-agcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggctgcaagcgacaaacctatcaaaataagg 42890365  T
Q  295 gtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||      |||||||||||||||||||||||||||||||||||||    
T  42890364 gtttccggaatccacca------agagaaaatctcgaataattttattgaatcaaaaagt 42890311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 178 - 346
Target Start/End: Original strand, 22520799 - 22520967
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    ||||||| || ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22520799 tgacgcaataaggaagcgtagggttagcaagcgctaaacctaggtagaaaagatcaagtttgcaagcgacaaatttgtgaaaatagggttgcaagtgaca 22520898  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaat 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22520899 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaat 22520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 21940665 - 21940810
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 21940810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 177 - 354
Target Start/End: Complemental strand, 6845426 - 6845249
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 276  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6845426 ctgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttacaagcgataaacttgtgaaaatagggttgcaagcgac 6845327  T
Q  277 aaacctatcaaaataagggtttccggaatccacc-agaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| | ||| |||||||||||||    
T  6845326 aaacctatcaaaataagggttt-cggaatccaccaaaaattgagagaaaatctcgaatattattaatgaatcaaaaagt 6845249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 186 - 334
Target Start/End: Complemental strand, 23570665 - 23570516
Alignment:
Q  186 tacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatc 285  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23570665 tacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaataaggttgcaagcgacaaacctatc 23570566  T
Q  286 aaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaata 334  Q
    ||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  23570565 aaaataagggtttccagaatgcaccagaattgagagaaaagtctcgaata 23570516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 6094129 - 6094268
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||| | |||||||| ||||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaa 6094268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 22171491 - 22171632
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaa 22171632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 24642655 - 24642794
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaa 24642794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 28554885 - 28555028
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaa 28555028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 453 - 580
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  553 ttaaacataaggaaactattctcaaagt 580  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 211 - 334
Target Start/End: Complemental strand, 23573639 - 23573515
Alignment:
Q  211 ctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccacc 310  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23573639 ctaaagctagatagaaaataacaagtttacaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccgaaatccacc 23573540  T
Q  311 agaattgagagaaaa-tctcgaata 334  Q
      ||||||||||||| |||||||||    
T  23573539 taaattgagagaaaagtctcgaata 23573515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 2189689 - 2189810
Alignment:
Q  145 aaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagc 244  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| ||| |||||||||||||||||||||    
T  2189689 aaaagaacatgagaaacatgctctgataccaactgacgcagtacggaagcgtaggct-agcaagcgctaaacctcgattgaaaagaacaagtttgcaagc 2189787  T
Q  245 gacaaacttgtgaaaatagggtt 267  Q
    |||||||||||||||||| ||||    
T  2189788 gacaaacttgtgaaaataaggtt 2189810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 265 - 354
Target Start/End: Original strand, 18180770 - 18180859
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18180770 gttgcaagcgacaaacctatcaaaataagggtttccagaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 18180859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 107 - 267
Target Start/End: Complemental strand, 2687901 - 2687742
Alignment:
Q  107 tcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagca 206  Q
    |||| ||| |||||||  |||||| |||||||||||  ||||||||||||||||||||||||||||||| |||| ||||| |||||||| | |  ||||     
T  2687901 tcgtcaccagttgatcttccatggttgatcacgttatgaaaagaacaggagaaacctgctctgataccacctgatgcagt-cggaagcg-aagactagcg 2687804  T
Q  207 agcactaaacctagatag-aaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2687803 agcgctaaacctagatagaaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 2687742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 116 - 267
Target Start/End: Complemental strand, 26375050 - 26374900
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaa 215  Q
    ||||||| ||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||| | |||||||  | ||||||||  |||     
T  26375050 gttgatctcccatgggtgatcatgttaggaaaagaataggagaaacctgctctgataccaactgatgcagtaggaaagcgta-agctagcaagcgttaag 26374952  T
Q  216 cctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  26374951 cctagattgaaaagaacaagttcgcaagcgacaaacttgtaaaaatagggtt 26374900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 18180630 - 18180753
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 194  Q
    |||| ||||||||||| |   ||||||| |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18180630 caaactctgccctcgtcataagttgatctcccatggctgatcatgttaggaaaagaacaggagaaacctgctttgataccaactgacgcagtacggaagc 18180729  T
Q  195 gtagggttagcaagcactaaaccta 219  Q
    ||| || |||||||| |||||||||    
T  18180730 gta-ggctagcaagcgctaaaccta 18180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 107 - 267
Target Start/End: Complemental strand, 16598409 - 16598249
Alignment:
Q  107 tcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagca 206  Q
    |||| ||||||||||| ||||||| || ||| ||||| ||||| ||||||||||||| |||| ||||||||| ||| |  ||||||||  | ||||||||    
T  16598409 tcgtcaccggttgatctcccatggatgctcaagttaggaaaaggacaggagaaacctactctaataccaactaacgtaaaacggaagc-aatggttagca 16598311  T
Q  207 agcactaaacctaga-tagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||| |||||| |||| ||||||  |||||||||||| |||||||||||||||||||||||||    
T  16598310 agcgctaaacttagattagaaagaaacaagtttgcacgcgacaaacttgtgaaaatagggtt 16598249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 18468737 - 18468649
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| |||||  ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  18468737 tgacgcagtacagaagca-agggttagcaagcgctaaacctaggtagaaaagaacaagcttgcaagcgacaaacttgtgaaaatagggtt 18468649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 102 - 267
Target Start/End: Original strand, 24578702 - 24578866
Alignment:
Q  102 tgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggt 201  Q
    ||||||||| | |||||||||  ||||||||||||||||  ||||| ||| |||||||||||||||||||||||| |||||||  ||  ||||  |   |    
T  24578702 tgccctcgtcatcggttgatcttccatggctgatcacgtacgaaaa-gaataggagaaacctgctctgataccaattgacgcaaaacaaaagc-aaaaat 24578799  T
Q  202 tagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||| |||| |||||||||||| |||||| ||||||||||||||||  |||  |||||||||||||||    
T  24578800 tagaaagcgctaaacctagatcgaaaagaaacaagtttgcaagcggtaaatctgtgaaaatagggtt 24578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 24731316 - 24731231
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    ||||||||||||| |||||||| | ||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  24731316 tgacgcagtacgggagcgtaggct-agcaagcgctaaacctagattgaaaaggaacaagtttgcaagcaacaaacttgtgaaaatag 24731231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 22171395 - 22171452
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22171395 ttgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 407
Target Start/End: Original strand, 24642555 - 24642608
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 407  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24642555 ttgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 28554790 - 28554847
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28554790 ttgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 288 - 354
Target Start/End: Complemental strand, 26150669 - 26150602
Alignment:
Q  288 aataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagt 354  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  26150669 aataaggatttccagaatccaccagaattgagagaaaagtctcgaatatttttattgaatgaaaaagt 26150602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 24731122 - 24731035
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagg 264  Q
    |||||||||||| ||| |||||| | ||||||| |||||  ||||| |||||| ||||||||||||||| |||||||||||||||||||    
T  24731122 ctgacgcagtacagaaccgtaggct-agcaagcgctaaatttagattgaaaaggaacaagtttgcaagcaacaaacttgtgaaaatagg 24731035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 518
Target Start/End: Complemental strand, 38232570 - 38232512
Alignment:
Q  459 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaat 518  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaat 38232512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 526
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  468 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt 526  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 15081572 - 15081494
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaa 345  Q
    |||||||||||||||||| || |||||| ||||||| |||||||| |||||||||| ||  ||||| ||||||||||||||    
T  15081572 gttgcaagcgacaaacctgtc-aaataaaggtttccagaatccacaagaattgagaaaagttctcg-ataattttattgaa 15081494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 38082173 - 38082260
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaa 352  Q
    ||||||||||||||||| ||||||| |||||||||| |||||| | ||||||||||| ||  ||||||  | ||||||||||| |||||    
T  38082173 ggttgcaagcgacaaacatatcaaa-taagggtttcaggaatctatcagaattgagaaaagttctcgataatttttattgaatgaaaaa 38082260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 548
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  485 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 477 - 547
Target Start/End: Complemental strand, 32873019 - 32872948
Alignment:
Q  477 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgaga 547  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| ||||||||||||||    
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgaga 32872948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 4360891 - 4360983
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa--tctcgaataattttattgaatcaaaaagtt 355  Q
    ||||||||||||||||||||| ||| ||| ||||||  ||||||| |  |||||||| ||||  ||||||||| ||||||||||| ||||||||    
T  4360891 ggttgcaagcgacaaacctattaaa-taaaggtttctagaatccatcgaaattgagaaaaaaagtctcgaatatttttattgaatgaaaaagtt 4360983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 2609547 - 2609584
Alignment:
Q  230 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||||| |||||||||||||||||||||||    
T  2609547 aacaagtttgcaagtgacaaacttgtgaaaatagggtt 2609584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 9295335 - 9295256
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaat 346  Q
    ||||||||||||||| || ||||| || | ||||| |||||||||||||||||||| ||  ||||| |||||||||||||||    
T  9295335 gttgcaagcgacaaatctgtcaaa-tatgagtttctggaatccaccagaattgagaaaagttctcg-ataattttattgaat 9295256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 14130244 - 14130165
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| || ||||||  |||| |||||| ||||||| |||||||||||||||| ||| ||||||||||| ||||    
T  14130244 cggaagcgtaggctt-gcaagcgttaaatctagatcgaaaagagacaagtttgcaagcgataaatttgtgaaaataaggtt 14130165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 20693855 - 20693799
Alignment:
Q  212 taaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| ||||| || ||||||||||||||||||| ||||||||||| ||||    
T  20693855 taaacctagattgaaaataaacaagtttgcaagcgacaaatttgtgaaaatatggtt 20693799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 26378089 - 26378031
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtt 237  Q
    ||||| |||||||||||||||| | ||||||| ||||| |||||| ||||||||||||||    
T  26378089 tgacgtagtacggaagcgtaggct-agcaagcgctaaatctagattgaaaagaacaagtt 26378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 267
Target Start/End: Original strand, 31072069 - 31072216
Alignment:
Q  125 ccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatag 224  Q
    ||||||||||||| ||||  ||||||||  ||||||  ||||||||||| |||| ||||||| |  ||||||| || |||||||| |||||||||||| |    
T  31072069 ccatggctgatcatgttacgaaaagaactagagaaagttgctctgatactaactaacgcagt-caaaagcgta-ggctagcaagcgctaaacctagattg 31072166  T
Q  225 -------aaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
           |||| || ||||||||||| || |||||| |||||||||||||    
T  31072167 agaaattaaaaaaaaaagtttgcaagagataaacttatgaaaatagggtt 31072216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 2374946 - 2375000
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 408  Q
    |||||||||||||||||||||   ||| | |||||||||| ||||||||||||||    
T  2374946 ttgttggaataagccctaataataaatatgtattgattggatttggctttgtatc 2375000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 2689183 - 2689146
Alignment:
Q  230 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||||||||||||  |||||||||||||||    
T  2689183 aacaagtttgcaagcgacaaaactgtgaaaatagggtt 2689146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattg 392  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 354
Target Start/End: Original strand, 21848788 - 21849147
Alignment:
Q  1 ttgttgtagttgcagttgttgttgatgttgtcaatcttagccgtcaacgccgtcgactgatctaacagagctttggcggccgcatttaaactgccaaatt 100  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||  |   ||||||||||||||||||||||||| |||||||| | ||||||    
T  21848788 ttgttgtagttgcggttgttgttgatgttgccgatcttagccgtcaacgccaccatatgatctaacagagctttggcggccgtatttaaaccgtcaaatt 21848887  T
Q  101 ctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtaggg 200  Q
     || |||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21848888 atgtcctcgtaaccggttgatctcccatggctgatcacgttagggaaaaaacaggagaaacctgctctgataccaaccgacgcagtacggaagcgtaggg 21848987  T
Q  201 ttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatc------aaaataagg 294  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||||||     
T  21848988 ttagcaagcgccaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacttatcaaaataaaaataagt 21849087  T
Q  295 gtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21849088 gttttcggaatccactagaattgagagaaaatctcgaataattttattgaatcaaaaagt 21849147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 40778786 - 40778962
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40778786 tgacgcagtacggaagcgcagggttaacaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtaaaaatagggttgcaagcgaca 40778885  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40778886 aacctatcaaaataagggtttctggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 40778962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 24695673 - 24695528
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaa 24695528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 18570070 - 18569925
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaa 18569925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 19714703 - 19714560
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaa 19714560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 19707419 - 19707280
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||| ||||||| ||| |||||| ||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaa 19707280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 114 - 267
Target Start/End: Original strand, 19497240 - 19497393
Alignment:
Q  114 cggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcacta 213  Q
    ||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||   ||| ||||||||| |||    
T  19497240 cggttgatctcccatggtggatcacgttaggaaaagaacaggagaaacctgctctgatatcaactgacgcggtacggaag-taaggattagcaagcgcta 19497338  T
Q  214 aacctag-atagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||  ||| | | |||||||||||||||||||||||||||||||||||||||||||    
T  19497339 aatgtagaaaaaaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 19497393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 447 - 556
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  547 accccattaa 556  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 452 - 592
Target Start/End: Complemental strand, 27347679 - 27347540
Alignment:
Q  452 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 551  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  552 attaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||  ||||| | |||||| |||||||  ||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaa 27347540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 22547217 - 22547078
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||| ||| ||| | |||| | ||||||| || ||||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaa 22547078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 24695766 - 24695709
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695766 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 451 - 550
Target Start/End: Complemental strand, 17285935 - 17285836
Alignment:
Q  451 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 550  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 453 - 556
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  553 ttaa 556  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 9868337 - 9868400
Alignment:
Q  112 accggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaa 176  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9868337 accggttgatctcccatggctgatcacgttagaaaaagaacagga-aaacctgctctgataccaa 9868400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 19677217 - 19677298
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaat 346  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19677217 ggttgcaagcgacaaacctttcaaa-taagggttttcggaatccaccagaattgagagaaaagtctcgaat-attttattgaat 19677298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 353 - 411
Target Start/End: Complemental strand, 19707520 - 19707462
Alignment:
Q  353 gttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707520 gttgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 18252504 - 18252416
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaa-agaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||| |||||| ||||| ||| |||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  18252504 tgacgcagt-cggaagtgtaggctta-caagcgttaaacctagatagaaatagaacaagtttgcaagcgacaaacctgtgaaaatagggtt 18252416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 8456380 - 8456465
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagg 264  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||| |||||| |||||||| ||||||||| ||||||| ||||||||    
T  8456380 tgacgcagt-cggaagcgtagggt-agcaagcgctaaacctagattgaaaagaaacaagttcgcaagcgacgaacttgtaaaaatagg 8456465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 451 - 530
Target Start/End: Complemental strand, 17299088 - 17299009
Alignment:
Q  451 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagt 530  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagt 17299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 22440936 - 22440858
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| | ||||||  ||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||    
T  22440936 cggaagcgtaggct-agcaagtgctaaacctagatagaaaagaacatgttcgcaagcgacaaacttatgataatagggtt 22440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 18570168 - 18570108
Alignment:
Q  351 aagttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| || ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  18570168 aagttgttcgagtaagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 492633 - 492567
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||| |||||  ||||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  492633 tagcaagcgctaaatttagattgaaaagaaacaagtttgcaagcgacaaacttgtgaagatagggtt 492567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 563
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  473 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 563  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 410  Q
    ||||||| |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 26140431 - 26140343
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaa-agaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||| ||||||| |||| ||||||| | ||||| |||||| |||| | |||||| ||||||||||||||||| |||||||||||||    
T  26140431 tgacgcagt-cggaagcatagg-ttagcaaacgctaaatctagattgaaagaaaacaagattgcaagcgacaaacttatgaaaatagggtt 26140343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 351
Target Start/End: Original strand, 35160815 - 35160899
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaa 351  Q
    ||||||| |||||||||| ||||| |||||||||| ||| |||||||||||| ||| ||  ||||| ||||||||||||||| ||||    
T  35160815 gttgcaaacgacaaacctgtcaaa-taagggtttcaggattccaccagaattaagaaaagttctcg-ataattttattgaatgaaaa 35160899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 21844437 - 21844468
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagc 209  Q
    ||||||||||||||||||||||||||||||||    
T  21844437 tgacgcagtacggaagcgtagggttagcaagc 21844468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 565
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  497 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 565  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 9868438 - 9868494
Alignment:
Q  212 taaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||| ||| || |||||||| ||||||| ||||| ||||||||||||||||||||||    
T  9868438 taaatctatattgaaaagaaacaagtttacaagcaacaaacttgtgaaaatagggtt 9868494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 18807175 - 18807131
Alignment:
Q  513 tttaatggaacattaagtataacttaattgtgagaccccattaaa 557  Q
    |||||||||||||||||| | ||||||| ||||||| ||||||||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa 18807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 280
Target Start/End: Original strand, 13885995 - 13886261
Alignment:
Q  15 gttgttgttgatgttgtcaatcttagccgtcaacgccgtcgactgatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaacc 114  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |    
T  13885995 gttgttgttgatgttgtcaatcttagctgtcaacgccgtcaactgatctaaaagagctttggcggccgcatttaaactgccaaactctgccctcgtaatc 13886094  T
Q  115 ggttgatcacccatggctgatcacgttaga-aaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcacta 213  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  13886095 ggttgatctcccatggctgatcacgttagggaaaagaacaggagaaacctgctctaataccaactgacgcagtacggaagcgtagggttagcaagcgcta 13886194  T
Q  214 aacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaac 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13886195 aacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaataggtttgcaagcgacaaac 13886261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 15 - 300
Target Start/End: Original strand, 1220277 - 1220562
Alignment:
Q  15 gttgttgttgatgttgtcaatcttagccgtcaacgccgtcgactgatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaacc 114  Q
    |||||||||||||||| | |||||||| | ||||| |  |  |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  1220277 gttgttgttgatgttgccgatcttagctgccaacgtcagcatctgatctaacagagctttggcggccgtatttaaactgccaaattctgtcctcgtaacc 1220376  T
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctg-ctctgataccaactgacgcagtacggaagcgtagggttagcaagcacta 213  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||| ||| ||||| |||||||||||||||||| | |||    
T  1220377 ggttgatctcccatggctgatc-cgttaggaaaagaacaggagaaaccaggctctgataccaactaacgtagtacagaagcgtagggttagcaaacgcta 1220475  T
Q  214 aacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttcc 300  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1220476 aacctacatagaaatgaacaagtttgcaaacgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaatagaggtttcc 1220562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 13882686 - 13882862
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13882686 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 13882785  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13882786 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcaaataattttattgaatcaaaaagt 13882862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 29327784 - 29327929
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 29327929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 11536269 - 11536124
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaa 11536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 11543187 - 11543042
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaa 11543042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 859156 - 859303
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  859156 tgacgcaatacggaagcgtaggattagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 859255  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaa 325  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  859256 aacctatcaaaataaaggtttccggaatccaccagaattgagagaaaa 859303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 1217160 - 1217307
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1217160 tgacgcaatacggaagcgtaggattagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 1217259  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaa 325  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1217260 aacctatcaaaataaaggtttccggaatccaccagaattgagagaaaa 1217307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 15152445 - 15152588
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaa 15152588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 12750828 - 12750971
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    | | |||||||||| ||||||||||| |||||||||||||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaa 12750971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 18561009 - 18561152
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaa 18561152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 15148144 - 15148287
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaa 15148287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 18258047 - 18257904
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaa 18257904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 235 - 354
Target Start/End: Original strand, 13886245 - 13886364
Alignment:
Q  235 gtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaata 334  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||     
T  13886245 gtttgcaagcgacaaacttgtgaaaataggtttgcaagcgacaaacctatcaaaataagggtttccagaatccaccataattgagagaaaatctcgaatg 13886344  T
Q  335 attttattgaatcaaaaagt 354  Q
    ||||||||||||||||||||    
T  13886345 attttattgaatcaaaaagt 13886364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 12738542 - 12738681
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaa 12738681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 67 - 267
Target Start/End: Complemental strand, 1883689 - 1883489
Alignment:
Q  67 agagctttggcggccgcatttaaactgccaaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgct 166  Q
    |||||||||||||||||| |||||| |  ||||||| || |||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||  |||    
T  1883689 agagctttggcggccgcaattaaaccgtgaaattctaccatcgtaaccggttgatctcccatgactgatcacgttaggaaaagaacaggagatacgagct 1883590  T
Q  167 ctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaataggg 265  Q
    |||| ||||||| ||| |||||| |||||||  | |||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||    
T  1883589 ctgacaccaactaacgtagtacgtaagcgta-tgctagcaaacactaaacctagattgaaaagaaacaagtttgcaaacgacaaacttgtgaaaataagg 1883491  T
Q  266 tt 267  Q
    ||    
T  1883490 tt 1883489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 1365810 - 1365672
Alignment:
Q  127 atggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaa 226  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||  || || |||||||| |||||||||||| |||    
T  1365810 atggctgatcatgttaggaaaagaacaggagaaacctgctctgataccaactgac-tagtacggaaggata-ggctagcaagcgctaaacctagattgaa 1365713  T
Q  227 aagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    | ||||||||||| ||||||  |||||||||||||||||||    
T  1365712 aggaacaagtttgtaagcgatgaacttgtgaaaatagggtt 1365672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 1874660 - 1874538
Alignment:
Q  145 aaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaag 243  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||  |||||||| |||||||||| ||| |||||| |||||||||||||     
T  1874660 aaaagaacaggagatacctgctccgataccaactgacgtagtacggaagcgta-tgttagcaaacactaaaccttgattgaaaagaaacaagtttgcaaa 1874562  T
Q  244 cgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||||||||||| ||||    
T  1874561 cgacaaacttgtgaaaataaggtt 1874538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 4300629 - 4300525
Alignment:
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaa 214  Q
    |||||||| | ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||  ||| | ||||||| ||||    
T  4300629 ggttgatctctcatggctgatcacattaggaaaagaactggagaaacctgctctgataccaactgacgcagtacggaagcaaaggttaagcaagcgctaa 4300530  T
Q  215 accta 219  Q
    |||||    
T  4300529 accta 4300525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 4303453 - 4303363
Alignment:
Q  264 ggttgcaagcga-caaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4303453 ggttgcaagcgaacaaacctattaaa-taagggttttcggaatccactagaattgagagaaaatctcgaataattttattgaatcaaaaagt 4303363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 31577269 - 31577360
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagtt 355  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  31577269 ggttgcaagcgacaaacctatcaaa-taagggtttccgaaatccaccagaattgagagaaaagtcttgaatatttttattgaatgaaaaagtt 31577360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 13392157 - 13392295
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||   ||||| | |||||| ||||||||  |||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaa 13392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 4888686 - 4888770
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    ||||||| |||||||||||||| | |||| || || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4888686 tgacgcaatacggaagcgtaggct-agcatgcgctgaacctagatagaaaagaacaagtttgcaagcgacaaacctgtgaaaatag 4888770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 11543280 - 11543223
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11543280 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 116 - 267
Target Start/End: Complemental strand, 24840287 - 24840143
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaa 215  Q
    ||||||| | |||||| ||||||||||| ||||||| |||||||| | ||||||||||||||||||| ||| || ||| ||||  |     |||  ||||    
T  24840287 gttgatctctcatggccgatcacgttaggaaaagaataggagaaatccgctctgataccaactgacgtagt-cgcaagtgtagact-----agc--taaa 24840196  T
Q  216 cctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  24840195 cctagattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 24840143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 27309636 - 27309704
Alignment:
Q  200 gttagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27309636 gttagcaagcgctaaacctagattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 27309704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 453 - 540
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 540  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 11536362 - 11536305
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11536362 ttgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 12750732 - 12750789
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750732 ttgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 15152349 - 15152406
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152349 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 1786763 - 1786683
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| ||||||||  ||||||||||||||||||  |||||||||||||||||||||| || ||||||||||||    
T  1786763 cggaagcgtaggattagcaagtgctaaacctagatagaaaaataacaagtttgcaagcgacaaacatgcgaaaatagggtt 1786683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 29327689 - 29327745
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 410  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29327689 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 592
Target Start/End: Original strand, 2364917 - 2365040
Alignment:
Q  469 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 568  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  569 tattctcaaagtatccgtagtcaa 592  Q
    |||||| ||| ||| |||||||||    
T  2365017 tattcttaaaatattcgtagtcaa 2365040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 29175838 - 29175780
Alignment:
Q  186 tacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagc 244  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  29175838 tacggaagcgtagggttagcaagcgctaaacctagattgaaaagaaaaagtttgcaagc 29175780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 27142722 - 27142666
Alignment:
Q  212 taaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27142722 taaacctagattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 27142666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 5934670 - 5934607
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagg 264  Q
    |||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  5934670 tagcaagcgctaaacctagattgaaaagaaacaaatttgcaagcgacaaacttgtgaaaatagg 5934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 480 - 574
Target Start/End: Original strand, 7396221 - 7396316
Alignment:
Q  480 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattct 574  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| ||||||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattct 7396316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 3778735 - 3778797
Alignment:
Q  205 caagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||  ||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  3778735 caagcactaaatatagattgaaatgaacaagtttgcaagcgagaaacttgtgaaaatagggtt 3778797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 7803031 - 7803120
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||||||||||||| ||||||||   ||||||||| | |||||||| ||||||||||||| |||||||| |||||||| ||||    
T  7803031 tgacgcagtacggaagcgtagg-ttagcaagggttaaacctaggtcgaaaagaaacaagtttgcaagcaacaaacttatgaaaataaggtt 7803120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 134 - 263
Target Start/End: Original strand, 8916334 - 8916462
Alignment:
Q  134 atcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaa-gaac 232  Q
    |||| ||||| ||||||||| ||||||||| ||||| |||||||||||||||| | ||||||||  | ||| ||||  |||||||||||  |||| ||||    
T  8916334 atcatgttaggaaaagaacaagagaaacctactctgttaccaactgacgcagt-cagaagcgta-tgctagtaagcgttaaacctagatttaaaatgaac 8916431  T
Q  233 aagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||||| ||| ||||||||| ||||||    
T  8916432 aagtttgcaaacgataaacttgtggaaatag 8916462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 11000849 - 11000915
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||| |||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||    
T  11000849 tagcaagcgctaaacctagattgaaaagaaacaagttcgcaagcgacaaactagtgaaaatagggtt 11000915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 30217879 - 30217819
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||| |||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  30217879 tagcaagcgctaaacctagattgaaa-gaacaagttcgcaagcgacaaacttgtgaaaatag 30217819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 13392029 - 13392085
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 410  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13392029 ttgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 22572344 - 22572459
Alignment:
Q  104 ccctcgtaaccggttgatcacccatggctga-tcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggtt 202  Q
    ||||||||||  ||||||| | ||||| ||| |||||||   ||||||||| | ||||||||||||||| ||||||||||||| ||||||||  ||| ||    
T  22572344 ccctcgtaactagttgatctctcatggttgaatcacgttcacaaaagaacatgggaaacctgctctgatgccaactgacgcagaacggaagc-aaggatt 22572442  T
Q  203 agcaagcactaaaccta 219  Q
    ||||||| |||||||||    
T  22572443 agcaagcgctaaaccta 22572459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 22572475 - 22572530
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgaga 320  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  22572475 ggttgcaagcgacaaatctatcaaa-taagggtttccggaatccacaagaattgaga 22572530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 521 - 564
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  521 aacattaagtataacttaattgtgagaccccattaaacataagg 564  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 5678299 - 5678388
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagt 354  Q
    |||| |||||||||||||||||||| ||||||||  |  | | ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  5678299 ggttacaagcgacaaacctatcaaa-taagggttcacata-tacaccagaattgagagaaaagtctcgaataattttattgaatgaaaaagt 5678388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 5703351 - 5703440
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagt 354  Q
    |||| |||||||||||||||||||| ||||||||  |  | | ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  5703351 ggttacaagcgacaaacctatcaaa-taagggttcacata-tacaccagaattgagagaaaagtctcgaataattttattgaatgaaaaagt 5703440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 1369871 - 1369805
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||  ||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||    
T  1369871 tagcaagcgttaaacctagattgaaaagaaacaagtttgcaagcgataaacttgttaaaatagggtt 1369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 11228787 - 11228721
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||| |||||||||| |||| ||||||| |||||||| |||||||||||||||| ||||||||||    
T  11228787 tagcaaacactaaaccttgataaaaaagaaacaagtttggaagcgacaaacttgtggaaatagggtt 11228721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 1753630 - 1753683
Alignment:
Q  211 ctaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatag 263  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  1753630 ctaaacctaaattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatag 1753683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 562
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  497 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 562  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 8063831 - 8063885
Alignment:
Q  206 aagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaa 260  Q
    |||||||| | |||||| ||||||||||||||||||||||| ||| |||||||||    
T  8063831 aagcactagatctagattgaaaagaacaagtttgcaagcgataaatttgtgaaaa 8063885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 4300511 - 4300470
Alignment:
Q  313 aattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  4300511 aattgagagaaaatctcaaataatttgattgaatcaaaaagt 4300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 4668258 - 4668342
Alignment:
Q  270 aagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||||||||| ||| |||||||||||  |||||||| ||||| |||||||| ||||||||| |||| || ||| |||||||    
T  4668258 aagcgacaaacctattaaa-taagggtttccataatccacctgaattaagagaaaagtctcgaatattttttttcaatgaaaaagt 4668342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 11229038 - 11228981
Alignment:
Q  211 ctaaacctagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| ||||| ||||||||||||| ||||||||| |||||||| ||||||    
T  11229038 ctaaacctagattgaaaaagaacaagtttgcaggcgacaaacgtgtgaaaaaagggtt 11228981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 479
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  447 acaaggcatttctttattgattttgttttgttt 479  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||| | || |||||||| ||||||||| ||||||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 6451776 - 6451839
Alignment:
Q  205 caagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||| ||||| |||||| |||| ||| |||||||||||||||||||| |||||||||| ||||    
T  6451776 caagcgctaaatctagattgaaaggaaacaagtttgcaagcgacaaacctgtgaaaataaggtt 6451839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 32053041 - 32052989
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgaga 320  Q
    |||||||||||||| || ||||||  |||||||||| ||||||||||||||||||    
T  32053041 ttgcaagcgacaaatctgtcaaaa--agggtttccgaaatccaccagaattgaga 32052989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 32936869 - 32936926
Alignment:
Q  287 aaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaat 346  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  32936869 aaataagggttttcggaatccaccataattgaga-aaattctcg-ataattttattgaat 32936926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 1883774 - 1883737
Alignment:
Q  15 gttgttgttgatgttgtcaatcttagccgtcaacgccg 52  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  1883774 gttgttgttgatgttgtcgatcttagctgtcaacgccg 1883737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 35814936 - 35814871
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||| ||||||| |||||| ||||  | ||| |||||||||||||||||||| |||||| ||||    
T  35814936 tagcaaacactaaatctagattgaaagaaccaactttgcaagcgacaaacttgtaaaaataaggtt 35814871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 116 - 354
Target Start/End: Original strand, 27956093 - 27956330
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaa 215  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27956093 gttgatctcccatggctgatc-cgttaggaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcgctaaa 27956191  T
Q  216 cctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaat 315  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27956192 cctagatagaaaagaacaagtttgcaagcgacaaacctatgaaaatagggttgcaagcgacaaacctatgaaaataagggtttccggaatccaccagaat 27956291  T
Q  316 tgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27956292 tgagagaaaatctcgaataattttattgaatcaaaaagt 27956330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 95 - 346
Target Start/End: Complemental strand, 2156139 - 2155887
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctg-atcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaag 193  Q
    ||||||||||||| ||||||| |||||| |||||||||| ||||||||    |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  2156139 caaattctgccctagtaaccg-ttgatctcccatggctggatcacgttcacgaaagaacaggggaaacctgctctgatgccaactgacgcagtacggaag 2156041  T
Q  194 cgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataag 293  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2156040 cgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcgagcgacaaacttgtgaaaataggattgcaagcgacaaacctatcaaaataag 2155941  T
Q  294 ggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaat 346  Q
    ||||| ||||||||| |||||||||||||||| ||| ||||| | |||||||||    
T  2155940 ggttttcggaatccatcagaattgagagaaaagtcttgaatattattattgaat 2155887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 27952318 - 27952494
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27952318 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 27952417  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27952418 aacctttgaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 27952494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 117 - 356
Target Start/End: Complemental strand, 31634254 - 31634015
Alignment:
Q  117 ttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaac 216  Q
    |||||| ||||| | |||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  31634254 ttgatctcccatagttgatcatgctaggaaaagaacaggagaaacctgctatgataccaactgacgcagtacggaagcgtagggttagcaaacgctaaac 31634155  T
Q  217 ctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccag-aat 315  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  31634154 ctagatagaaaagaacaagtttgctagcgacaaacttgtgaaaataggattgcaagcgacaaacctatcaaaataagggttt-cggaatccaccagaaat 31634056  T
Q  316 tgagagaaaatctcgaataattttattgaatcaaaaagttg 356  Q
    |||||||||||||| |||| | ||| ||||| |||||||||    
T  31634055 tgagagaaaatctcaaatattattaatgaataaaaaagttg 31634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 21330455 - 21330310
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 21330310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 177 - 334
Target Start/End: Complemental strand, 22011526 - 22011368
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 276  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  22011526 ctgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagtgacaaacttgtgaaaatagggttggaagcgac 22011427  T
Q  277 aaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaata 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22011426 aaacctatcaaaataagggtttccggaatccaccagaattgagagaaaagtctcgaata 22011368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 177 - 354
Target Start/End: Complemental strand, 33655717 - 33655540
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 276  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  33655717 ctgacgcagtacggaagtgtagg-ttagcaagcgctaaacctagatagaaaaatacaagtttgcaagcgacaaacttgtgaaaatagggttgcaaacgac 33655619  T
Q  277 aaacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  33655618 aaacctatcaaaataagggtttccggaatccaccagaaattgagagaaaatctcgaataattttattgaatgaaaaagt 33655540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 177 - 357
Target Start/End: Complemental strand, 31636427 - 31636247
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 276  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  31636427 ctgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaactagtttgcaagcgacaaacttgtgaaaatatggttgcaagcgac 31636328  T
Q  277 aaacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaagttgt 357  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| | ||| ||||| ||||||||||    
T  31636327 aaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatcttgaatattattaatgaataaaaaagttgt 31636247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 116 - 267
Target Start/End: Complemental strand, 33051769 - 33051618
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaa 215  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||| |||||    
T  33051769 gttgatctctcatggctgatcacgttaggaaaagaacaggagaaacctgctctgataccaactgacgtagtacggaagctta-ggctagcaagcgctaaa 33051671  T
Q  216 cctagatag-aaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||| || | ||||||||||||||||||||||||||||| |||||||||||||    
T  33051670 cctaaattgaaaaagaacaagtttgcaagcgacaaacttttgaaaatagggtt 33051618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 18796506 - 18796651
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaa 18796651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 36647414 - 36647293
Alignment:
Q  145 aaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagc 244  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| ||| |||||||||||||||||||||    
T  36647414 aaaagaacatgagaaacatgctctgataccaactgacgcagtacggaagcgtaggct-agcaagcgctaaacctcgattgaaaagaacaagtttgcaagc 36647316  T
Q  245 gacaaacttgtgaaaatagggtt 267  Q
    |||||||||||||||||||||||    
T  36647315 gacaaacttgtgaaaatagggtt 36647293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 117 - 262
Target Start/End: Complemental strand, 28738054 - 28737911
Alignment:
Q  117 ttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaac 216  Q
    |||||| |||||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||| |||||||||| |  |||||||  ||||||    
T  28738054 ttgatctcccatggctgatcatgttaggaaaagcacaagagaaatctgctctgataccaactgacgcagt-cggaagcgta-gtctagcaagtgctaaac 28737957  T
Q  217 ctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 262  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||    
T  28737956 ctagattgaaaagagcaagtttgcaagcgacaaacttttgaaaata 28737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 18619807 - 18619949
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||| ||||| | |||||| |||||||| || |||||    
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaa 18619949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 15129478 - 15129390
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||| |||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15129478 tgacgtagtacggaagcgtaggct-agcaagcgctaaacctagatagaaaagaacaagttcgcaagcgacaaacttgtgaaaatagggtt 15129390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 8781515 - 8781429
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaa 352  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  8781515 ggttgcaagcgacaaacctatcaaa-taagggtttc-gaaatccaccagaattgagagtaaatctcgaataattttattgaatgaaaaa 8781429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 22264437 - 22264348
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||| |||||||||||| || ||| ||||||  ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  22264437 ggttgcaagagacaaacctatcgaa-taaaggtttctagaatccatcagaattgagataaaatctcgaataattttattgaatcaaaaagt 22264348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 2165983 - 2165899
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 262  Q
    ||||||||||||  |||||||||||| |||||  ||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  2165983 tgacgcagtacgacagcgtagggttaacaagcgttaaacctagatagaaaagaacaagtttgcaagcaacaaacttatcaaaata 2165899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 100 - 267
Target Start/End: Original strand, 32163694 - 32163860
Alignment:
Q  100 tctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagg 199  Q
    ||||||||||| |   ||||||| ||||||| |||||||||||| ||||||| || |||||  |||||| ||||||||||||||||| | |||||| | |    
T  32163694 tctgccctcgttataagttgatctcccatggttgatcacgttaggaaaagaatagaagaaatatgctctaataccaactgacgcagt-cagaagcg-aag 32163791  T
Q  200 gttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    | ||| ||||  ||||||||||| |||||| || ||||||| ||||| |||||||||||||||| ||||    
T  32163792 gctagaaagcgttaaacctagattgaaaagaaataagtttgtaagcgtcaaacttgtgaaaatatggtt 32163860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 23457712 - 23457646
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||| |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  23457712 tagcaagcgctaaacctagattgaaaataaacaagtttgcaagcgacaaacttgtgaaaatagggtt 23457646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 44675308 - 44675368
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa 325  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  44675308 ggttgcaagcgacatacctatcaaa-taagggttttcggaatccaccagaattgagagaaaa 44675368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 5171596 - 5171674
Alignment:
Q  189 ggaagcgtagggttagcaagcactaaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| ||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  5171596 ggaagcgtagg-ttaacaagcgctaaatctagattgaaaagagacaagtttgcaagcgacaaacttgtaaaaatagggtt 5171674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 21772452 - 21772375
Alignment:
Q  189 ggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| ||||| | | |||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  21772452 ggaagcgtagg-ttagccaacgctaaacttagattgaaaaaaacaagtttgcaagcgacaaacttatgaaaatagggtt 21772375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 23456704 - 23456638
Alignment:
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgac 181  Q
    |||||||| | |||||||||||||||||| |||||||||  |||||| |||||||||||||||||||    
T  23456704 ggttgatctctcatggctgatcacgttaggaaaagaacaaaagaaacttgctctgataccaactgac 23456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 32161993 - 32162058
Alignment:
Q  203 agcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||  ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  32161993 agcaagcgttaaacctagatcgaaaagaaacaagtttgcaagtgacaaacttgtgaaaatagggtt 32162058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 592
Target Start/End: Original strand, 20977957 - 20978037
Alignment:
Q  512 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  ||||||||||||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaa 20978037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 12966532 - 12966477
Alignment:
Q  212 taaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  12966532 taaatctagattgaaaagaacaagttcgcaagcgacgaacttgtgaaaatagggtt 12966477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 1518281 - 1518193
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||||||||||||    |||||||| || ||||||||| |||| | ||||||| ||||||||| ||||| |||||||||||||    
T  1518281 tgacgcagtacggaagcgta-tcctagcaagcgcttaacctagattgaaagggacaagttcgcaagcgacgaacttatgaaaatagggtt 1518193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 18725683 - 18725770
Alignment:
Q  267 tgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||||||||||||| |||||| |||||| ||| ||||| | |||| |||||||| | || |||||||||||||||| |||||||    
T  18725683 tgcaagcgacaaacctatc-aaataaaggtttctggattccactaaaattaagagaaaagtttcaaataattttattgaatgaaaaagt 18725770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 351
Target Start/End: Complemental strand, 2165924 - 2165838
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaa 351  Q
    |||||||| |||||| |||||||||||  |||| | |||||||||| ||||||||||||| ||||||||| | ||| ||||| ||||    
T  2165924 ttgcaagcaacaaacttatcaaaataaatgttttcagaatccaccaaaattgagagaaaagtctcgaatattattaatgaataaaaa 2165838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 351
Target Start/End: Complemental strand, 5841305 - 5841221
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaa 351  Q
    |||||||||||||||||| || ||| | |||||| |||||||||| |||||||||| ||  ||||| ||||||||||||||| ||||    
T  5841305 gttgcaagcgacaaacctgtc-aaacaggggttttcggaatccacaagaattgagaaaagttctcg-ataattttattgaatgaaaa 5841221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 8294644 - 8294582
Alignment:
Q  202 tagcaagcactaaacctagatagaa-aagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||  |||||| ||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  8294644 tagcaagtgctaaacttagatagaagaagaacacgtttgcaagcgacaaacttgtaaaaatag 8294582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 19692830 - 19692773
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692830 ttgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 574
Target Start/End: Original strand, 18822115 - 18822210
Alignment:
Q  481 aaaataataaagtccctagaatagttagtccgttt-aatgg-aacattaagtataacttaattgtgagaccccattaaacataaggaaactattct 574  Q
    ||||||||||||||  |||||| |||||| ||||| ||||| || ||||||| |  |||||| ||||||| |||||||||| ||||| ||||||||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattct 18822210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 23456631 - 23456580
Alignment:
Q  212 taaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaata 262  Q
    |||||||| || |||||||| |||||||||||||||||||||| ||||||||    
T  23456631 taaacctatattgaaaagaaacaagtttgcaagcgacaaacttttgaaaata 23456580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 4184963 - 4184929
Alignment:
Q  233 aagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||| |||||||||||||||||||||||||||||    
T  4184963 aagttcgcaagcgacaaacttgtgaaaatagggtt 4184929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 28737903 - 28737841
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaacaagtttgcaagcgac-aaacttgtgaaaatag 263  Q
    |||||||| ||||||||| || |||||||  ||||||||||| ||| ||||||||||||||||    
T  28737903 tagcaagcgctaaacctaaattgaaaagagtaagtttgcaagagacaaaacttgtgaaaatag 28737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 18796411 - 18796470
Alignment:
Q  354 ttgttggaataagccctaatagccaatctata--ttgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||| ||  ||||||||  ||||||| ||||||||||||||||||    
T  18796411 ttgttggattaagccctaacagaaaatctatatattgattgcgtttggctttgtatcatg 18796470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 509
Target Start/End: Original strand, 36270199 - 36270227
Alignment:
Q  481 aaaataataaagtccctagaatagttagt 509  Q
    |||||||||||||||||||||||||||||    
T  36270199 aaaataataaagtccctagaatagttagt 36270227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 1e-98; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 95 - 325
Target Start/End: Original strand, 43306591 - 43306819
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 194  Q
    |||| ||||||||||| || | |||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43306591 caaactctgccctcgtcacag-ttgatctcccatggctgatc-cgttaggaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 43306688  T
Q  195 gtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagg 294  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43306689 gtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcaacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagg 43306788  T
Q  295 gtttccggaatccaccagaattgagagaaaa 325  Q
    ||||||| |||||||||||||||||||||||    
T  43306789 gtttccgtaatccaccagaattgagagaaaa 43306819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 178 - 354
Target Start/End: Complemental strand, 5128998 - 5128822
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5128998 tgacgcagtacagaagcgtagggttagcaggcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 5128899  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5128898 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 5128822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 116 - 325
Target Start/End: Original strand, 3068813 - 3069022
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaa 215  Q
    ||||||| ||||||||| |||| ||||| || |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  3068813 gttgatctcccatggcttatcatgttaggaagagaacaggagaaacatgctctaataccaactgacgcagtacggaagcgtatggttagcaagcgctaaa 3068912  T
Q  216 cctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaat 315  Q
    ||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3068913 cctagatagaaaagaacaagtttgcaaggaaaaaacttgtaaaaatagggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccaaaat 3069012  T
Q  316 tgagagaaaa 325  Q
    ||||||||||    
T  3069013 tgagagaaaa 3069022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 6110064 - 6110209
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 6110209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 10572799 - 10572654
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 10572654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 450 - 592
Target Start/End: Original strand, 13211305 - 13211447
Alignment:
Q  450 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  550 ccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaa 13211447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 13248607 - 13248752
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaa 13248752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 15601091 - 15600946
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 15600946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 15607636 - 15607491
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 15607491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 18640953 - 18640808
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 18640808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 16482688 - 16482545
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaa 16482545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 17781319 - 17781180
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaa 17781180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 18522665 - 18522808
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaa 18522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 8490488 - 8490633
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaa 8490633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 10579556 - 10579417
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaa 10579417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 15357793 - 15357648
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaa 15357648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 178 - 334
Target Start/End: Original strand, 43303960 - 43304117
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43303960 tgacgcagtacggaagcgtaaggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 43304059  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaata 334  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  43304060 aacctattaaaataagggtttccgaaatccaccagaattgagagaaaagtctcgaata 43304117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 449 - 589
Target Start/End: Complemental strand, 17200389 - 17200249
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagt 589  Q
    ||| |||||||||| ||||||||||| ||||||||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagt 17200249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 19089946 - 19089807
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaa 19089807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 177 - 334
Target Start/End: Original strand, 3063736 - 3063894
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 276  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  3063736 ctgacgcagtacgaaagcgtagggttagcaagcgttaaacctagatagaaaagaaagagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 3063835  T
Q  277 aaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaata 334  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  3063836 aaacctatcaaaataagggttttcggaatcaaccagaattgagagaaaagtctcgaata 3063894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 449 - 574
Target Start/End: Original strand, 18519980 - 18520105
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  549 cccattaaacataaggaaactattct 574  Q
    ||| ||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattct 18520105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 13516813 - 13516956
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaa 13516956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 466 - 592
Target Start/End: Complemental strand, 15342407 - 15342281
Alignment:
Q  466 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 565  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  566 aactattctcaaagtatccgtagtcaa 592  Q
    | |||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaa 15342281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 32057101 - 32056962
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||| ||||||||||| ||||| |||||||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaa 32056962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 1647726 - 1647583
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagta----taacttaattgtgagac 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||||||||| | |||||||||||| ||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaa 1647583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 16200128 - 16200270
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaa 16200270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 29924971 - 29925116
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaa 29925116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 29974124 - 29974269
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaa 29974269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 16200434 - 16200576
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaa 16200576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 454 - 582
Target Start/End: Complemental strand, 24253589 - 24253460
Alignment:
Q  454 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-cccca 552  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  553 ttaaacataaggaaactattctcaaagtat 582  Q
    | ||||||||||| |||||||| |||||||    
T  24253489 tcaaacataaggacactattcttaaagtat 24253460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 40593528 - 40593605
Alignment:
Q  263 gggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttat 341  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  40593528 gggttgcaagcgacaaacctatcaaa-taagggttttcggaatccaccaaaattgagagaaaatctcgaataattttat 40593605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 53013025 - 53012958
Alignment:
Q  268 gcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaata 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53013025 gcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaagtctcgaata 53012958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 353 - 411
Target Start/End: Original strand, 6109970 - 6110028
Alignment:
Q  353 gttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109970 gttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 13248514 - 13248571
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248514 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 13211210 - 13211267
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13211210 ttgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 41218806 - 41218724
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaat 346  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  41218806 ggttgtaagcgacaaacctatcaaa-taaggctttccggaatccaccagaattgagagaaaagtctcgaatattattattgaat 41218724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 4580565 - 4580479
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaa 351  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| ||||    
T  4580565 ggttgcaagcgacaaacctatcaaa-taagggttttcagaatccactagaattgagagaaaattctcgaat-attttattgaatgaaaa 4580479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 411
Target Start/End: Complemental strand, 15607732 - 15607672
Alignment:
Q  352 agttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15607732 agttgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 368791 - 368874
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgac 181  Q
    |||| ||||||||||| | ||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||    
T  368791 caaactctgccctcgtcatcggttgatctcccatggctgatc-cgttagaaaaaga--aggagaaacctgctctgataacaactgac 368874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 10579653 - 10579603
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgt 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 2472689 - 2472777
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| ||||||||| | ||||||| ||||||||| || ||||   |||||||||||| ||||||||||||||||||||||||    
T  2472689 tgacgcagtacgaaagcgtaggct-agcaagcgctaaacctaaattgaaagagacaagtttgcaaccgacaaacttgtgaaaatagggtt 2472777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 15351294 - 15351237
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15351294 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 15357886 - 15357829
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15357886 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 17200484 - 17200427
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17200484 ttgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 494  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 52708923 - 52708844
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| ||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||||    
T  52708923 cggaagcgtagg-ttaacaagcgctaaacctagatagaaaaagaacaaatttgcaagcgataaacttgtgaaagtagggtt 52708844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 354 - 405
Target Start/End: Complemental strand, 10572891 - 10572840
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgt 405  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  10572891 ttgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 45168338 - 45168401
Alignment:
Q  197 agggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaa 260  Q
    ||||||||||||  |||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  45168338 agggttagcaagtgctaaacctagattgaaataaacaagtttgcaagcgacaaacttgtgaaaa 45168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 15601185 - 15601127
Alignment:
Q  354 ttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  15601185 ttgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 365593 - 365681
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||| |||||||||||||| | ||||| | ||||||||| | |||||| ||||| ||  ||||||||||||||||||||||||||||    
T  365593 tgacgcattacggaagcgtaggct-agcaaacgctaaacctaaaaagaaaataacaaattcccaagcgacaaacttgtgaaaatagggtt 365681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 13516718 - 13516775
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  13516718 ttgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 17781415 - 17781358
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  17781415 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 19090042 - 19089985
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19090042 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 20398486 - 20398574
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaa 352  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||| |||| || ||| |||||    
T  20398486 ggttgcaagcgacaagtctatcaaa-taagggttttcggaatccaccagaattgagaaaaaagtctcgaatatttttcttaaataaaaaa 20398574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 353
Target Start/End: Original strand, 33620096 - 33620181
Alignment:
Q  267 tgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagag-aaaatctcgaataattttattgaatcaaaaag 353  Q
    ||||||||  |||||||||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||||||| ||||||    
T  33620096 tgcaagcgcaaaacctatcaaa-taagggtttccagaatcctccagaattgagagaaaaatctcg-atatttttattgaattaaaaag 33620181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 39913348 - 39913403
Alignment:
Q  298 tccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaa 352  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  39913348 tccggaatccaccagaattgggagaaaagtctcgaatatttttattgaatcaaaaa 39913403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 19950004 - 19949927
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttatt 342  Q
    |||||||||||||||| ||||||| |||||||||  |||||||| |||||||||||||||| |||| |||| |||||||    
T  19950004 gttgcaagcgacaaacttatcaaa-taagggtttttggaatccatcagaattgagagaaaagtctctaatatttttatt 19949927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 18510828 - 18510885
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18510828 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 18522569 - 18522626
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18522569 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 18534662 - 18534719
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  18534662 ttgttgtagtaagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 45168410 - 45168466
Alignment:
Q  297 ttccggaatccaccagaa-ttgagagaaaatctcgaataattttattgaatcaaaaa 352  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  45168410 ttccagaatccacaagaaattgagagaaaatctcgaataattttattgaataaaaaa 45168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 592
Target Start/End: Original strand, 17136465 - 17136504
Alignment:
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaa 17136504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 19795244 - 19795168
Alignment:
Q  274 gacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaa 352  Q
    |||||||||||  ||||||||  || || ||||||||| |||| ||||||||||| ||||||||||||||||| |||||    
T  19795244 gacaaacctatgcaaataagg--ttacgaaatccaccaaaatttagagaaaatctggaataattttattgaataaaaaa 19795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 35908506 - 35908572
Alignment:
Q  199 ggttagcaagcactaaacctagatagaaaagaac-aagtttgcaagcgacaaacttgtgaaaataggg 265  Q
    ||||||||||| |||||||||||||| ||||||| || ||||||| |||||||||||| |||||||||    
T  35908506 ggttagcaagcgctaaacctagatag-aaagaacaaaatttgcaaacgacaaacttgtaaaaataggg 35908572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 25857773 - 25857707
Alignment:
Q  286 aaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaa 351  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||| |||| | ||||||||| ||||    
T  25857773 aaaataagggtttccgaaatccaccacaattgagagaaaagtctcaaatattattattgaataaaaa 25857707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 1151201 - 1151150
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgaga 320  Q
    |||||||| |||||||||||||||   |||||| |||||||||||||||||||||    
T  1151201 ttgcaagcaacaaacctatcaaaa---gggttttcggaatccaccagaattgaga 1151150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 25340169 - 25340256
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaa 352  Q
    ||||||| || |||||||||||||| |||||||||| |||||||| || |||||||| ||  | ||||  ||||||||||||| |||||    
T  25340169 ggttgcacgcaacaaacctatcaaa-taagggtttctggaatccatcataattgagaaaagttgtcgataaattttattgaataaaaaa 25340256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 267
Target Start/End: Complemental strand, 33175922 - 33175835
Alignment:
Q  179 gacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||| |||||||||||| | ||||| |  |||||||| || ||||||| ||||||||||||  ||||||||| |||||||||||||    
T  33175922 gacgcagt-cggaagcgtaggct-agcaaacgataaacctatattgaaaagagacaagtttgcaaaggacaaacttatgaaaatagggtt 33175835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 53013048 - 53013020
Alignment:
Q  181 cgcagtacggaagcgtagggttagcaagc 209  Q
    |||||||||||||||||||||||||||||    
T  53013048 cgcagtacggaagcgtagggttagcaagc 53013020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 6e-91; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 95 - 334
Target Start/End: Complemental strand, 3536207 - 3535967
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctg-atcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaag 193  Q
    ||||||||||||| || |||| |||||| |||||||||| ||||||||    |||||||||| |||||||||||||||  ||||||||||||||||||||    
T  3536207 caaattctgccctagtgaccgattgatctcccatggctggatcacgttcacgaaagaacaggggaaacctgctctgatgtcaactgacgcagtacggaag 3536108  T
Q  194 cgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataag 293  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3536107 cgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataag 3536008  T
Q  294 ggtttccggaatccaccag-aattgagagaaaatctcgaata 334  Q
    || |||||||||||||||| ||||||||||||||||||||||    
T  3536007 gg-ttccggaatccaccagaaattgagagaaaatctcgaata 3535967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 17684674 - 17684531
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| ||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaa 17684531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 17691647 - 17691502
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaa 17691502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 27381459 - 27381314
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaa 27381314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 27471842 - 27471697
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaa 27471697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 29308890 - 29309035
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    | ||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaa 29309035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 29315850 - 29315995
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    | ||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaa 29315995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 175 - 334
Target Start/End: Complemental strand, 3542337 - 3542178
Alignment:
Q  175 aactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcg 274  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3542337 aactgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgtaagcgacaaacttgtgaaaatagggttgcaagcg 3542238  T
Q  275 acaaacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaata 334  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  3542237 acaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaata 3542178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 16566525 - 16566382
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||||||||||| |||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaa 16566382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 30050019 - 30049829
Alignment:
Q  164 gctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30050019 gctctgatgccaactgacgcagtacggaagcgaagggttagcaagcgctaaacctatatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 30049920  T
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccacc-agaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
     |||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||| | ||| ||||| |||||||    
T  30049919 agttgcaagcgacaaacctatcaaaattaggg-ttccggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagt 30049829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 189182 - 189039
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||||||| |||||||  ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaa 189039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 11651725 - 11651868
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaa 11651868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 25537364 - 25537221
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaa 25537221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 30052306 - 30052116
Alignment:
Q  164 gctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||| ||||||||||||||| |||| || |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30052306 gctctgatgccaactgacgcagtatggaatcgaagggttagaaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 30052207  T
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccacc-agaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
     |||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||| | ||| ||||| |||||||    
T  30052206 agttgcaagcgacaaacctatcaaaattaggg-ttccggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagt 30052116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 182 - 351
Target Start/End: Original strand, 29340810 - 29340980
Alignment:
Q  182 gcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacc 281  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29340810 gcagtacggaagcgtagggttagcaggcgctaaacctagatagaaaaaaacaagtttgcaagcgacaaacttgtgaaaatagggttacaagcgacaaacc 29340909  T
Q  282 tatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaa 351  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| | ||| ||||| ||||    
T  29340910 tatcaaaataaaggtttccggaatccactagaattgagagaaaagtctcgaatattattaatgaataaaaa 29340980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 13359474 - 13359331
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
     |||||||||||||  | | |||| | |||||||||||||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaa 13359331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 11190669 - 11190516
Alignment:
Q  65 acagagctttggcggccgcatttaaactgccaaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctg 164  Q
    ||||||||||||||| |||| |||||||| |||||||| |  | |||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||    
T  11190669 acagagctttggcggtcgcaattaaactgtcaaattctccttttgtaaccggttgatctcctatggctgatcacgttaggaaacgaacaggagaaacctg 11190570  T
Q  165 ctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaaccta 219  Q
    |||||||||||||||| ||| |||||||||  ||||||||||| |||||||||||    
T  11190569 ctctgataccaactgaagcaatacggaagc-aagggttagcaaacactaaaccta 11190516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 11190500 - 11190412
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11190500 ggttgcaagcgacaaacctatcaaa-taagg-tttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 11190412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 117 - 260
Target Start/End: Original strand, 18718139 - 18718279
Alignment:
Q  117 ttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaac 216  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| ||| || |||||||| ||||||    
T  18718139 ttgatctcccatggctgatcatgttaggaaaagaacaggagaaacctgctctgataccaacggacgcagtacagaagtgta-ggctagcaagcgctaaac 18718237  T
Q  217 ctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaa 260  Q
    |||||| |||||  |||| || ||||  ||||||||||||||||    
T  18718238 ctagattgaaaaagacaaattcgcaa--gacaaacttgtgaaaa 18718279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 262
Target Start/End: Original strand, 8048904 - 8049049
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacc-tgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaa 214  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| | |||||||| |||    
T  8048904 gttgatctcccatggctaatc-cgttaggaaaagaacaggagaaaccatgctctgataccaactgacccaatacagaagcgtaggct-agcaagcattaa 8049001  T
Q  215 acctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 262  Q
     |||||||  ||||||| ||||||||||| ||||||||||||||||||    
T  8049002 tcctagattaaaaagaaaaagtttgcaagtgacaaacttgtgaaaata 8049049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  357 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 27381552 - 27381495
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27381552 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 27471935 - 27471878
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27471935 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 29308797 - 29308854
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29308797 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 29315757 - 29315814
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29315757 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 11659000 - 11658936
Alignment:
Q  199 ggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  11659000 ggttagcaagcactaaacctagattgaaaagaacaaatttgcaagcgataaacttgtgaaaatag 11658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 26571152 - 26571071
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaat 346  Q
    |||||||||||||||| |||| ||| || |||||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  26571152 ggttgcaagcgacaaatctattaaa-taggggttttcggaatccgctagaattgagagaaaatctcgaataattttattgaat 26571071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 27822118 - 27822207
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||||||||||||| | ||||| | ||||||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  27822118 tgacgcagtacggaagcgtaggct-agcaaacgctaaacctaaatagaaaaggaacaagttttcaagcgacaaacttgtgaaaacagggtt 27822207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 33615504 - 33615593
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||| ||||||| |||||| | | ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33615504 tgacgcattacggaaacgtaggctaa-caagcgcaaaacctagatagaaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 33615593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 17684769 - 17684712
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17684769 ttgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 24443009 - 24443073
Alignment:
Q  114 cggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaact 178  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  24443009 cggttgatcgcccatggctgatcacgttaggaaaagaacaagagaaacatgctctgataccaact 24443073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 29342113 - 29342061
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaaga 230  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29342113 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaaga 29342061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 409  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 25537462 - 25537405
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25537462 ttgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 3565739 - 3565652
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaa 351  Q
    ||||| |||||| |||||||||||| |||| ||||||  ||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  3565739 ggttgtaagcgataaacctatcaaa-taagagtttccaaaatccaccagaattgagagaaaagtctcgaatatttttattgaatgaaaa 3565652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 2339157 - 2339223
Alignment:
Q  287 aaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaag 353  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  2339157 aaataagggtttccgaaatccaccagaattgagagaaaagtctcg-ataattttattgaatgaaaaag 2339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 486 - 589
Target Start/End: Complemental strand, 20553755 - 20553652
Alignment:
Q  486 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 585  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  586 tagt 589  Q
    ||||    
T  20553655 tagt 20553652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 267
Target Start/End: Complemental strand, 14238568 - 14238436
Alignment:
Q  133 gatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaa- 231  Q
    ||||| ||||| ||||||||||||||||||| ||||  |||||| |||| ||  |  ||| | |||| | ||||| |||||||| || || ||||||||     
T  14238568 gatcatgttaggaaaagaacaggagaaacctactctattaccaaatgacacatca--gaaacataggct-agcaaacactaaacataaattgaaaagaaa 14238472  T
Q  232 caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||||||||||||||||||||||| ||||    
T  14238471 caagtttgcaagcgacaaacttgtgaaaataaggtt 14238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 509
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  454 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 509  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 551
Target Start/End: Original strand, 8509941 - 8510026
Alignment:
Q  466 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 551  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| |||||||||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccc 8510026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 13359569 - 13359512
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  13359569 ttgtgggagtaagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  363 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 18727186 - 18727115
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaa 260  Q
    |||||||||||| | ||||| | |||||||||||| |||||  ||||||| ||||||||||||||||||||||    
T  18727186 cggaagcgtaggct-agcaaacgctaaacctagattgaaaaacacaagttcgcaagcgacaaacttgtgaaaa 18727115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 592
Target Start/End: Complemental strand, 17850663 - 17850556
Alignment:
Q  485 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 584  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  585 gtagtcaa 592  Q
     |||||||    
T  17850563 atagtcaa 17850556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 1127320 - 1127258
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||| ||| ||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||    
T  1127320 tagcgagcgctaaacctagattaaaaagaaacaagtttgcaagcgacaaatttgtgaaaatag 1127258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 12882189 - 12882123
Alignment:
Q  202 tagcaagcactaaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||| |||| ||||||||| || |||| ||||||||  |||||||||||||||||||||||||||    
T  12882189 tagcaaacactgaacctagattgagaagagacaagttttaaagcgacaaacttgtgaaaatagggtt 12882123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 13645898 - 13645955
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaa 324  Q
    |||||||| |||||||||| ||| ||||||||||||||||| | |||||||||||||||    
T  13645898 ttgcaagcaacaaacctattaaa-taagggtttccggaatctaacagaattgagagaaa 13645955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 27925772 - 27925899
Alignment:
Q  470 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaac---attaa--gtataacttaattgtgagaccccattaaacataagg 564  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||   |||||  || | ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  565 aaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||| ||||||||  |||||||    
T  27925872 aaattattcttaaagtatctctagtcaa 27925899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 189280 - 189221
Alignment:
Q  355 tgttggaataagccctaatagccaatcta---tattgattgggtttggctttgtatcatg 411  Q
    ||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||||||    
T  189280 tgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 2939780 - 2939837
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaa 324  Q
    ||||||||||||||||||||| |||||| ||||| || ||||||||| ||||||||||||    
T  2939780 gttgcaagcgacaaacctatc-aaataa-ggttttcgaaatccaccataattgagagaaa 2939837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 411
Target Start/End: Complemental strand, 16394526 - 16394484
Alignment:
Q  369 ctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||    
T  16394526 ctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 19232363 - 19232329
Alignment:
Q  286 aaaataagggtttccggaatccaccagaattgaga 320  Q
    |||||||||||||||||||||||||| ||||||||    
T  19232363 aaaataagggtttccggaatccaccaaaattgaga 19232329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 528
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  463 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 528  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 22873870 - 22873822
Alignment:
Q  212 taaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaa 259  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||    
T  22873870 taaacctaaattgaaaagagacaagtttgcatgcgacaaacttgtgaaa 22873822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 33215186 - 33215246
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaat 261  Q
    |||||| | ||||| ||||||  ||||||| |||||||||||||||||||| |||||||||    
T  33215186 tagcaaacgctaaatctagattaaaaagaaacaagtttgcaagcgacaaacctgtgaaaat 33215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 4e-89; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 95 - 325
Target Start/End: Original strand, 13443906 - 13444135
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 194  Q
    |||| ||||||||||| | | ||||||| ||||||||||||| |||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||    
T  13443906 caaactctgccctcgtcatcagttgatctcccatggctgatc-cgttaggaaaagaacatgataaacctgctctgataccaactgacgcagttcggaagc 13444004  T
Q  195 gtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagg 294  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  13444005 atagggttaacaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaataggattgcaagcgacaaacatatcaaaataagg 13444104  T
Q  295 gtttccggaatccaccagaattgagagaaaa 325  Q
    ||||||| |||||||||||||||||||||||    
T  13444105 gtttccgtaatccaccagaattgagagaaaa 13444135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 50857444 - 50857620
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  50857444 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaataagtttgtaagcgacaaacttgtgaaaatagggttgcaagcgaca 50857543  T
Q  278 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50857544 aacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgtatcaaaaagt 50857620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 18252030 - 18252175
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 18252175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 18532721 - 18532576
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 18532576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 27131616 - 27131471
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaa 27131471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 178 - 334
Target Start/End: Complemental strand, 8931309 - 8931153
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8931309 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagattgaaaaaaacaagtttgcaagcgataaacttgtgaaaatagggttgcaagcgaca 8931210  T
Q  278 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaata 334  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  8931209 aacctatcaatataaggg-ttccggaatccaccagaaattgagagaaaatctcgaata 8931153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 16359240 - 16359097
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||||||||||| |||||| || |||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaa 16359097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 21171438 - 21171295
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| || ||||||||||||||||||| |||||||||||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaa 21171295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 27310782 - 27310639
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    | | || ||||||||||||||||||| |||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaa 27310639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 3856126 - 3855981
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||| | |||||| ||| |||  ||||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaa 3855981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 36816834 - 36816695
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||| | |||||| ||||||||| |||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaa 36816695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 447 - 580
Target Start/End: Complemental strand, 22657429 - 22657295
Alignment:
Q  447 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 545  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  546 gaccccattaaacataaggaaactattctcaaagt 580  Q
    |||||| ||||||||||||| || ||||| |||||    
T  22657329 gacccctttaaacataaggacacaattcttaaagt 22657295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 23987736 - 23987581
Alignment:
Q  107 tcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagca 206  Q
    |||| ||||||||||| |||||| ||||||||| ||| ||||||||| |||||||||||| | ||||||||||||||| | ||||||||||||| |||||    
T  23987736 tcgtcaccggttgatctcccatgcctgatcacgctaggaaaagaacaagagaaacctgctttaataccaactgacgcaattcggaagcgtaggg-tagca 23987638  T
Q  207 agcactaaacctagatag-aaaagaacaagtttgcaagcgacaaacttgtgaaaata 262  Q
    ||| || ||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  23987637 agcgctgaacctagatagaaaaagaacaactttgcaaacgacaaacttgtgaaaata 23987581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 13441612 - 13441746
Alignment:
Q  184 agtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaaccta 283  Q
    |||||||||| ||| ||||||||||| |||||| ||||||||||||||||| ||||||||||       ||||||||||||||||||||||| |||||||    
T  13441612 agtacggaagagtatggttagcaagcgctaaacttagatagaaaagaacaattttgcaagcg-------tgtgaaaatagggttgcaagcgaaaaaccta 13441704  T
Q  284 tcaaaataagggtttccggaatccaccagaattgagagaaaa 325  Q
    | ||||||||| ||||||||||||| ||||||||||||||||    
T  13441705 ttaaaataaggatttccggaatccatcagaattgagagaaaa 13441746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 28660701 - 28660835
Alignment:
Q  132 tgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaa 231  Q
    |||||||||||| ||||||||| |  |||||| |||||||||||||||||| ||| |||||||||||| | ||||| | ||||||||||||||| |||||    
T  28660701 tgatcacgttaggaaaagaacatggaaaacctactctgataccaactgacgtagt-cggaagcgtaggat-agcaaacgctaaacctagatagataagaa 28660798  T
Q  232 -caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
     ||||||||||||||||||||||||||||||||||||    
T  28660799 acaagtttgcaagcgacaaacttgtgaaaatagggtt 28660835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 12486314 - 12486392
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaa 345  Q
    |||||||| |||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  12486314 ttgcaagcaacaaacctattaaa-taagggttttcggaatccaccaaaattgagagaaaatctcgaataattttattgaa 12486392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 12006712 - 12006628
Alignment:
Q  481 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 565  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| |||||||||||    
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataagga 12006628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 31915638 - 31915550
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||| |||||||||||| ||| | |||||||||||||| ||| | ||||  ||||||||||||||||||||||||||||||||||||||    
T  31915638 tgacgtagtacggaagcgcaggct-agcaagcactaaacttaggttgaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 31915550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 10925859 - 10925740
Alignment:
Q  144 aaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaag 243  Q
    ||||| ||||||||||||||||| |||||| ||| |||||||| |||||||| | || |||||||| ||||||||| || ||||  ||||| ||||||||    
T  10925859 aaaaaaaacaggagaaacctgctttgatactaacagacgcagt-cggaagcgga-ggctagcaagcgctaaacctaaattgaaa--aacaattttgcaag 10925764  T
Q  244 cgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| |||||| ||||    
T  10925763 cgacaaacttgtaaaaatatggtt 10925740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 40804660 - 40804571
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagttg 356  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||| |||||||| || ||||||||| |||||||||    
T  40804660 ttgcaagcgacaaacctatcaaa-tacgggtttccaaaatccaccagaattgagagaaaagtctcgaat-atattattgaatgaaaaagttg 40804571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 267
Target Start/End: Original strand, 8967738 - 8967893
Alignment:
Q  112 accggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcac 211  Q
    ||||||||||| ||||||||||||||| |||  ||||| ||||||||||||| || || | |||  ||||||||| | |||||| | || | ||||||      
T  8967738 accggttgatctcccatggctgatcacattacgaaaaggacaggagaaacctactatggtgccacttgacgcagt-ccgaagcg-aaggctcgcaagcgt 8967835  T
Q  212 taaacctagat--agaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||  ||||||||||||||||||||  ||||||| | |||||||||||||    
T  8967836 taaacctagatagagaaaagaacaagtttgcaaatgacaaacctatgaaaatagggtt 8967893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 453 - 527
Target Start/End: Complemental strand, 27277756 - 27277682
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatta 527  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||||    
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta 27277682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 562
Target Start/End: Complemental strand, 12014457 - 12014376
Alignment:
Q  481 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 562  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| ||||||||||||||    
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataa 12014376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 42071413 - 42071489
Alignment:
Q  269 caagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaat 346  Q
    |||| ||||||||||||||| |||| ||||| |||||||| || |||||||||| |||||||||||||||||||||||    
T  42071413 caagtgacaaacctatcaaa-taagcgtttctggaatccatcataattgagagagaatctcgaataattttattgaat 42071489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 40058102 - 40058184
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaac-aagtttgcaagcgacaaacttgtgaaaa 260  Q
    |||||| ||||||||||||||| | |||||||| |||||||| |||||||||||  ||||||||||||||||||||| ||||||    
T  40058102 tgacgcggtacggaagcgtaggct-agcaagcagtaaacctaaatagaaaagaaataagtttgcaagcgacaaacttatgaaaa 40058184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 40804780 - 40804701
Alignment:
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 194  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||| ||  ||||||||||||||  ||| ||||||||    
T  40804780 ggttgatctcccatggctgatcgcgttaggaaaagaacaggagaaacatggactgataccaactgatccagaacggaagc 40804701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 21171536 - 21171479
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  21171536 ttgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 353 - 411
Target Start/End: Complemental strand, 3856222 - 3856164
Alignment:
Q  353 gttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||| || |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3856222 gttgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 12944182 - 12944116
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||| ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||||||||    
T  12944182 tagcaagcgctaaatctagattgaaaagaaacaagtttgcaaacgacaaacttgtaaaaatagggtt 12944116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 31913442 - 31913380
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagg 264  Q
    |||||||| |||||||||| | ||||  |||||||||||||||||||||||||| ||||||||    
T  31913442 tagcaagcgctaaacctaggttgaaagaaacaagtttgcaagcgacaaacttgtaaaaatagg 31913380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 36816935 - 36816881
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 408  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  36816935 ttgtcggattaagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 12033638 - 12033730
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagttgt 357  Q
    |||||||||||||||| |||| |||| ||||||| |  ||||||  ||||||||||||||| ||||||||| ||||||| ||| ||||||||||    
T  12033638 gttgcaagcgacaaacttatc-aaatgagggtttacataatccattagaattgagagaaaagtctcgaatatttttattaaataaaaaagttgt 12033730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 354 - 407
Target Start/End: Complemental strand, 22657522 - 22657469
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 407  Q
    |||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657522 ttgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 453 - 522
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 522  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 50713770 - 50713713
Alignment:
Q  211 ctaaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||    
T  50713770 ctaaacctagattgaaaagagacaagttcgcaggcgacaaacttgtgaaaatagggtt 50713713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 43681528 - 43681465
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa--caagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||| |||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||||    
T  43681528 tagcaagcgctaaacctagattgaaaaaaaaacaagtttgcaagcgacaaatttgtgaaaatag 43681465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 10927234 - 10927199
Alignment:
Q  225 aaaagaacaagtttgcaagcgacaaacttgtgaaaa 260  Q
    ||||||||||||||||||||||||||||||||||||    
T  10927234 aaaagaacaagtttgcaagcgacaaacttgtgaaaa 10927199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 554
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  477 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 554  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 554
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  477 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 554  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 9031096 - 9031016
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggttg 268  Q
    |||||||||||| | |||||| |||||||||| || |||||| || |||||||||||| | |||||| ||||||||||||||    
T  9031096 cggaagcgtaggct-agcaagtactaaacctatattgaaaaggaataagtttgcaagcaataaacttatgaaaatagggttg 9031016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 494
Target Start/End: Complemental strand, 9918106 - 9918071
Alignment:
Q  459 tttattgattttgttttgtttcaaaataataaagtc 494  Q
    |||||||||||||||||||| |||||||||||||||    
T  9918106 tttattgattttgttttgttacaaaataataaagtc 9918071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 42646674 - 42646624
Alignment:
Q  267 tgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattga 318  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||| ||||||    
T  42646674 tgcaaacgacaaacctatcaaa-taagggtttccagaatccaccaaaattga 42646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 10928377 - 10928289
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||| ||||||||||| | ||||||  ||||||||||||  |||||| | ||||||| ||| |||||||||||||||||| ||||    
T  10928377 tgacgcagta-ggaagcgtaggct-agcaagtgctaaacctagattaaaaagatataagtttgtaagtgacaaacttgtgaaaataaggtt 10928289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 8221545 - 8221488
Alignment:
Q  211 ctaaacctagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||| |||| ||| ||| |||||||||||| |||||||||| |||||||||||||    
T  8221545 ctaaaccaagattgaatagagacaagtttgcaaacgacaaacttatgaaaatagggtt 8221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 26981598 - 26981516
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 262  Q
    ||||||||| |||||||||||| ||| | ||  ||||| |||||| ||||  ||||||||||||||||| |||||||| ||||||    
T  26981598 tgacgcagt-cggaagcgtagg-ttatctagggctaaatctagattgaaagaaacaagtttgcaagcgaaaaacttgtaaaaata 26981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 28661078 - 28661157
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||| | ||||||  ||||||||| || || ||||| ||||||||||||||| |||| ||| |||||||||||    
T  28661078 cggaagcgtaggct-agcaagtgctaaacctaaattgataagaaacaagtttgcaagcgaaaaacctgtaaaaatagggtt 28661157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 31913515 - 31913451
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaa 159  Q
    |||| |||||||| |||| | ||||||| ||||| | |||||||||||| |||||||||| ||||    
T  31913515 caaaatctgcccttgtaatcagttgatctcccatagatgatcacgttaggaaaagaacagtagaa 31913451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 33152756 - 33152808
Alignment:
Q  216 cctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||| |||||||| ||||||||||||||||||||||  || |||||||||    
T  33152756 cctagattgaaaagaaacaagtttgcaagcgacaaacttacgacaatagggtt 33152808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 3e-80; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 177 - 356
Target Start/End: Original strand, 6659330 - 6659508
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 276  Q
    ||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6659330 ctgacgcagtacggaagtgtagg-ttagcaagcgctaaatctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 6659428  T
Q  277 aaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagttg 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  6659429 aaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaatagttttagtgaatcaaaaagttg 6659508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 19926967 - 19926822
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 19926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 26970463 - 26970608
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 26970608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 5707320 - 5707465
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 5707465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 26963640 - 26963785
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 26963785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 55612683 - 55612828
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaa 55612828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 5713948 - 5714093
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 5714093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 18262214 - 18262357
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| ||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaa 18262357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 868597 - 868742
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaa 868742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 10621540 - 10621395
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaa 10621395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 10628619 - 10628474
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaa 10628474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 28393339 - 28393196
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||||||||||||| |||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaa 28393196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 18269070 - 18269218
Alignment:
Q  449 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 543  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  544 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaa 18269218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 4426808 - 4426666
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaa 4426666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 459 - 592
Target Start/End: Original strand, 8845215 - 8845348
Alignment:
Q  459 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 558  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  559 ataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||| |||||||||||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaa 8845348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 459 - 592
Target Start/End: Original strand, 8858179 - 8858312
Alignment:
Q  459 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 558  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  559 ataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||| |||||||||||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaa 8858312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 447 - 562
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  547 accccattaaacataa 562  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 13085178 - 13085268
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13085178 ggttgcaagcgacaaacctatcaaaataagggttttcggaatccaccaaaattgagagaaaatctcgaataattttattgaataaaaaagt 13085268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 582
Target Start/End: Original strand, 20311299 - 20311427
Alignment:
Q  455 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa-gtataacttaattgtgagaccccat 553  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| |||||| |||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  554 taaacataaggaaactattctcaaagtat 582  Q
    |||||||||||| ||| || | |||||||    
T  20311399 taaacataaggacactgtttttaaagtat 20311427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 116 - 267
Target Start/End: Original strand, 13991318 - 13991468
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaa 215  Q
    |||||||  ||||| ||||||||||||||||| ||||| || |||  |||| ||||||||||||||||||| |||||||||| || |||||||| |||||    
T  13991318 gttgatctaccatgactgatcacgttagaaaatgaacatgataaatttgctttgataccaactgacgcagt-cggaagcgta-ggctagcaagcgctaaa 13991415  T
Q  216 cctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
     |||||| |||||| |||||||||||||||||||||| || ||||||| ||||    
T  13991416 tctagattgaaaagaaacaagtttgcaagcgacaaacatgcgaaaataaggtt 13991468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 58 - 267
Target Start/End: Original strand, 7723959 - 7724163
Alignment:
Q  58 tgatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaaccggttgatcacccatggctg-atcacgttagaaaaagaacagga 156  Q
    |||||| |||||||||||   | ||||| ||||| | |||| |||||||||||||| ||||||||| |||||| || |||||||||||||||||||||||    
T  7723959 tgatctcacagagctttgatagtcgcatctaaaccgtcaaaatctgccctcgtaactggttgatcaaccatggttgaatcacgttagaaaaagaacagga 7724058  T
Q  157 gaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgt 255  Q
    ||||| ||||   ||| |||||||| |||||| ||| ||||  | |||||||  ||||||||| || |||||||| ||||||||| ||||||||||   |    
T  7724059 gaaacttgct---atatcaactgacacagtacagaaacgta-tgctagcaagtgctaaacctatattgaaaagaagcaagtttgcgagcgacaaac---t 7724151  T
Q  256 gaaaatagggtt 267  Q
    ||||||||||||    
T  7724152 gaaaatagggtt 7724163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 13086221 - 13086311
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||| |||||||||||||||||||||||| |||| | |||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  13086221 ggttgtaagcgacaaacctatcaaaataagagttttcagaatccattagaattgagagaaaatctcgaataattttattgaattaaaaagt 13086311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 107 - 267
Target Start/End: Original strand, 54700527 - 54700686
Alignment:
Q  107 tcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagca 206  Q
    |||| ||||||||||| |  ||| ||||||||||| | |||| | ||||||||||||||||||||||||||||||||||| ||  || ||| || |||||    
T  54700527 tcgtcaccggttgatctctaatgactgatcacgttgggaaaaaatcaggagaaacctgctctgataccaactgacgcagt-cgagagtgta-ggctagca 54700624  T
Q  207 agcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    | | ||||||||| || |||||| |||||||||||||| ||||||||||||| |||||||||    
T  54700625 aacgctaaacctatattgaaaagaaacaagtttgcaagtgacaaacttgtgagaatagggtt 54700686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 22716661 - 22716590
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaata 334  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  22716661 ggttgcaagcgacaaacctatcaaaaaaagggtttccggaatccaccagaattgagagaaaagtctcgaata 22716590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 453 - 540
Target Start/End: Original strand, 35223576 - 35223663
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 540  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||    
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat 35223663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 453 - 550
Target Start/End: Complemental strand, 5668327 - 5668230
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 550  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgagaccc 5668230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 5713855 - 5713912
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713855 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 26963547 - 26963604
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963547 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 26970370 - 26970427
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970370 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 5616215 - 5616358
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaa 5616358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 10677753 - 10677615
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||  || || | |||||| |||||||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaa 10677615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 10891393 - 10891255
Alignment:
Q  453 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 552  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  553 ttaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||  || || | |||||| |||||||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaa 10891255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 22691312 - 22691253
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa 325  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22691312 ttgcaagcgacaaacctatcgaaataagggtttccggaatccaccagaattgagagaaaa 22691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 22988556 - 22988627
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaata 334  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  22988556 ggttgcaagcgacaaacctatcgaaaaaagggtttccggaatccaccagaattgagagaaaagtctcgaata 22988627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 10621633 - 10621576
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10621633 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 7723665 - 7723751
Alignment:
Q  179 gacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||| |||||||||| | ||||||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  7723665 gacgcagtacagaagcgtaggct-agcaagcgctaaac-tagattgaaaagaacaagtttgcaagctacaaacttgtgaaaatagggtt 7723751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  357 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 2053095 - 2053176
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattga-gagaaaatctcgaataattttattgaat 346  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||| |||||||| || ||| |||||||||||||||||||||    
T  2053095 gttgcaagcgacaaatctatcaaa-taagggtttccgaaatccactagaattgaggaaaaagtctcgaataattttattgaat 2053176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 7634212 - 7634084
Alignment:
Q  134 atcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaa-gaac 232  Q
    |||| ||||| ||||||||| ||||||||| ||||| |||||||||||||||| | ||||||||  | ||| ||||  ||||||||||| ||||| ||||    
T  7634212 atcatgttaggaaaagaacaagagaaacctactctgttaccaactgacgcagt-cagaagcgta-tgctagtaagcgttaaacctagattgaaaaggaac 7634115  T
Q  233 aagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||||| ||| ||||||||| ||||||    
T  7634114 aagtttgcaaacgataaacttgtggaaatag 7634084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 267
Target Start/End: Complemental strand, 24667746 - 24667657
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| ||||||||||| | |||||||  |||||||||||||||||||| ||| | ||| || ||||||||||||||||||||||    
T  24667746 ctgacgcagtatggaagcgtaggct-agcaagcgttaaacctagatagaaaagaagaagctcgcaggcaacaaacttgtgaaaatagggtt 24667657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 409  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 18268975 - 18269032
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18268975 ttgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 9596944 - 9596853
Alignment:
Q  264 ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagtt 355  Q
    |||||||| ||| |||||||||||| |||||||||||  ||||||||||||||||||||||| |||| |||| | ||||||||| ||||||||    
T  9596944 ggttgcaaacgataaacctatcaaa-taagggtttccataatccaccagaattgagagaaaagtctcaaatattcttattgaatgaaaaagtt 9596853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 19935575 - 19935487
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| |||||||||| | ||| ||| ||||||  |||||||||| || || |||||||||||||||||| |||||||||||||    
T  19935575 tgacgcagtacagaagcgtaggct-agccagcgctaaactcagatagaaaaaaataaatttgcaagcgacaaacttatgaaaatagggtt 19935487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 22691388 - 22691327
Alignment:
Q  107 tcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctct 168  Q
    |||| ||| ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  22691388 tcgtcaccagttgatctcccatggctgatcactttaggaaaagaacaggagaaacctgctct 22691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 268 - 351
Target Start/End: Complemental strand, 4053145 - 4053062
Alignment:
Q  268 gcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaa 351  Q
    ||||||||||||||||||||  ||||| ||| || ||||||||| ||||||||||||| ||||||||| ||||||||||| ||||    
T  4053145 gcaagcgacaaacctatcaag-taaggattttcgaaatccaccataattgagagaaaagtctcgaatatttttattgaatgaaaa 4053062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 496 - 563
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  496 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 563  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 50515822 - 50515978
Alignment:
Q  95 caaattctgccctcgtaaccggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagc 194  Q
    |||| ||||| ||||| || |||||||| ||||| ||||||||||||| |||||||||| |||||||||          ||||||||| ||| |||||||    
T  50515822 caaactctgctctcgtcactggttgatctcccattgctgatcacgttacaaaaagaacatgagaaacct---------tcaactgacgtagt-cggaagc 50515911  T
Q  195 gtagggttagcaagcactaaacctagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaat 261  Q
    | | || |||||||| ||| || ||||  || ||| ||||||||||||||||||||||||||||||||    
T  50515912 gga-ggctagcaagcgctacacttagactgagaagaaacaagtttgcaagcgacaaacttgtgaaaat 50515978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 40206238 - 40206153
Alignment:
Q  177 ctgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||| |||||||||||||| | ||||||| ||||| ||| || ||||   ||||||| |||||||||||||||||||||||||    
T  40206238 ctgacgcactacggaagcgtaggct-agcaagcgctaaatctaaattgaaagagacaagttcgcaagcgacaaacttgtgaaaatag 40206153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 21433595 - 21433652
Alignment:
Q  211 ctaaacctagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||||||||||||||| |||||| || ||||||||||||||| |||||||||||||    
T  21433595 ctaaacctagatagaaaaagaacaaattcgcaagcgacaaacttatgaaaatagggtt 21433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  362 ataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 18689553 - 18689613
Alignment:
Q  211 ctaaacctagatagaaaagaacaa-gtttgcaagcgacaaacttgtgaaaatagggttgca 270  Q
    |||||||||||| |||||||| || ||||||| ||||||||||||| ||||||||||||||    
T  18689553 ctaaacctagattgaaaagaaaaaagtttgcatgcgacaaacttgtaaaaatagggttgca 18689613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 38888023 - 38888079
Alignment:
Q  212 taaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||    
T  38888023 taaacctagattgaaaataaacaaatttgcaagcgacaaacttgtgaaaatagggtt 38888079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 10494966 - 10494907
Alignment:
Q  205 caagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatag 263  Q
    ||||||| |||||||||| |||||||| |||||||||||| ||||||| |||||||||||    
T  10494966 caagcaccaaacctagatggaaaagaaacaagtttgcaagtgacaaacctgtgaaaatag 10494907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 22486799 - 22486861
Alignment:
Q  202 tagcaagcactaaacctagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagg 264  Q
    |||||||| ||||||||| |||||||| || |||||||||||||||| ||||||||||||||||    
T  22486799 tagcaagcgctaaacctatatagaaaaagaccaagtttgcaagcgac-aacttgtgaaaatagg 22486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 54239604 - 54239531
Alignment:
Q  269 caagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattga 344  Q
    |||| ||||||||||||||| ||||||||| |||||||||||| |||||||| ||  ||||| |||||||||||||    
T  54239604 caagggacaaacctatcaaa-taagggttttcggaatccaccaaaattgagaaaagttctcg-ataattttattga 54239531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 18657070 - 18657128
Alignment:
Q  207 agcactaaacctagatagaaaagaacaa-gtttgcaagcgacaaacttgtgaaaatagg 264  Q
    |||||||||||||||| |||||||| || ||||||| ||||||||||||| ||||||||    
T  18657070 agcactaaacctagattgaaaagaaaaaagtttgcatgcgacaaacttgtaaaaatagg 18657128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  370 taatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 38223117 - 38223200
Alignment:
Q  267 tgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaa 352  Q
    ||||| |||||||||||||||| ||||||||| | |||||||| |||||||||| ||| ||||||  | ||||||||||| |||||    
T  38223117 tgcaaacgacaaacctatcaaa-taagggtttacagaatccactagaattgaga-aaagtctcgataatttttattgaatgaaaaa 38223200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  363 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  363 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  371 aatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 556
Target Start/End: Complemental strand, 21454319 - 21454235
Alignment:
Q  473 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaa 556  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaa 21454235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 34949082 - 34949169
Alignment:
Q  270 aagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagttgt 357  Q
    |||||| |||||||| ||| || ||||||| | |||||||| || ||||||||||| ||||||||| ||||||||||| ||| ||||||    
T  34949082 aagcgataaacctattaaatta-gggtttctgaaatccacccgatttgagagaaaagtctcgaatatttttattgaataaaatagttgt 34949169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 556
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  497 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 556  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 19684822 - 19684880
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa 325  Q
    |||||||||||||||||||| ||| |||||||||| |||| ||  |||||||||||||||    
T  19684822 ttgcaagcgacaaacctatc-aaacaagggtttccagaattcaatagaattgagagaaaa 19684880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  357 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 9260610 - 9260573
Alignment:
Q  230 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  9260610 aacaagtttgcaaacgacaaacttgcgaaaatagggtt 9260573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 13990729 - 13990766
Alignment:
Q  230 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  13990729 aacaagtttgcaagtaacaaacttgtgaaaatagggtt 13990766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 17254893 - 17254968
Alignment:
Q  188 cggaagcgtagggttagcaagcactaaacctagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||||||||| | ||||| | |||||| ||||| ||| | |||||| ||| ||||||||||||||||||||||||    
T  17254893 cggaagcgtaggct-agcaaacgctaaacttagattgaagatgaacaaattttcaagcgacaaacttgtgaaaatag 17254968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 24699958 - 24700006
Alignment:
Q  363 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||| |||||||||||||||||  ||||| |||||||||||    
T  24699958 taagcccgaataaccaatctatattgattgaatttggttttgtatcatg 24700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 55139096 - 55139163
Alignment:
Q  175 aactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaag 243  Q
    ||||||||||| ||||||| ||||| |||||||||  ||||||||||| ||||  ||||| ||||||||    
T  55139096 aactgacgcagcacggaagtgtagg-ttagcaagcgttaaacctagattgaaataaacaaatttgcaag 55139163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 146; Significance: 1e-76; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 2528 - 2383
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 11419 - 11274
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 11274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 2621 - 2564
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2621 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 11512 - 11455
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11512 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 138; Significance: 7e-72; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 7141 - 6996
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaa 6996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 14157 - 14012
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaa 14012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 7234 - 7177
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7234 ttgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 138; Significance: 7e-72; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 18288 - 18433
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 18433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 7107 - 7252
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaa 7252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 7014 - 7071
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7014 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 447 - 592
Target Start/End: Complemental strand, 26197 - 26052
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 26052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 26287 - 26231
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 410  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26287 ttgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 126; Significance: 1e-64; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 447 - 592
Target Start/End: Original strand, 993 - 1138
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 546  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  547 accccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaa 1138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 901 - 957
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 449 - 592
Target Start/End: Original strand, 5531 - 5674
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| ||||||||||||||| |||||| |||||||  ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaa 5674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 5435 - 5492
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5435 ttgttgaagtaagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 108; Significance: 6e-54; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 449 - 592
Target Start/End: Complemental strand, 230545 - 230403
Alignment:
Q  449 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  549 cccattaaacataaggaaactattctcaaagtatccgtagtcaa 592  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaa 230403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 178 - 351
Target Start/End: Original strand, 45262 - 45435
Alignment:
Q  178 tgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 277  Q
    |||| ||||||||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  45262 tgacacagtacggaagcgtagggttagcaagcgctaaaattagataagaaagaacaagtttgcaagcgacaaacttatgaaaataaggttgcaagcgaca 45361  T
Q  278 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaa 351  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| | ||| ||||| ||||    
T  45362 aacctatcaaaataaggg-ttccagaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaaa 45435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 46713 - 46806
Alignment:
Q  158 aaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaac 251  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46713 aaaccggctctgatgccaactgacgcagtacggaagcgtagggtgagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaac 46806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 46792 - 46880
Alignment:
Q  266 ttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaa-ttgagagaaaatctcgaataattttattgaatcaaaaagt 354  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||| || |||||||||||||||||||| | ||| ||||| |||||||    
T  46792 ttgcaagcgacaaacctatcaaaattaaggtt-ccggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagt 46880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 115 - 263
Target Start/End: Complemental strand, 16196 - 16051
Alignment:
Q  115 ggttgatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaa 214  Q
    |||||||| | ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||| || || ||||  ||||    
T  16196 ggttgatctctcatggctgatcacattaggaaaagaactggagaaacctgctctgataccaactgacgcagt-cggaa-cgta-ggctaacaagtgctaa 16100  T
Q  215 acctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  16099 acctagatagaaaagaacaagtttgcaagtgacaaacatctgaaaatag 16051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 124 - 264
Target Start/End: Complemental strand, 14988 - 14850
Alignment:
Q  124 cccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaaacctagata 223  Q
    |||||||||||| | ||||| |||||||| ||||||||||||||||||||||||||||||| |   |||||||| || |||||||| |||||||| |||     
T  14988 cccatggctgattaagttaggaaaagaacgggagaaacctgctctgataccaactgacgcaat-tagaagcgta-ggctagcaagcgctaaaccttgatt 14891  T
Q  224 gaaaagaacaagtttgcaagcgacaaacttgtgaaaatagg 264  Q
    ||||  || ||||| |||||||| |||||||||||||||||    
T  14890 gaaataaataagttggcaagcgaaaaacttgtgaaaatagg 14850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 1797 - 1658
Alignment:
Q  128 tggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgt-agggttagcaagcactaaacctagatagaa 226  Q
    |||||||||||||||| ||||||| ||||||||| | |||||||||||||| || |||| | || | || |  | ||||||||  ||||||||||| |||    
T  1797 tggctgatcacgttaggaaaagaataggagaaacttactctgataccaactaacacagt-cagacgtgtaattgctagcaagcgttaaacctagattgaa 1699  T
Q  227 aagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |  ||||||||||||| |||||||||||| |||||| ||||    
T  1698 agaaacaagtttgcaaacgacaaacttgtcaaaatatggtt 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 262
Target Start/End: Original strand, 11527 - 11672
Alignment:
Q  116 gttgatcacccatggctgatcacgttagaaaaagaacaggagaaacc-tgctctgataccaactgacgcagtacggaagcgtagggttagcaagcactaa 214  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| | |||||||| |||    
T  11527 gttgatctcccatggctaatc-cgttaggaaaagaacaggagaaaccatgctctgataccaactgacccaatacagaagcgtaggct-agcaagcattaa 11624  T
Q  215 acctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 262  Q
     |||||||  ||||||| ||||||||||| ||||||||||||||||||    
T  11625 tcctagattaaaaagaaaaagtttgcaagtgacaaacttgtgaaaata 11672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 14920 - 15084
Alignment:
Q  19 ttgttgatgttgtcaatcttagccgtcaacgccgtcgactgatctaacagagctttggcggccgcatttaaactgccaaattctgccctcgtaaccggtt 118  Q
    |||||||| ||||||||| |||| ||||| | ||||  ||  ||| ||| |  |||| |||||||| ||||||||  |||||||||||| ||||||||||    
T  14920 ttgttgatcttgtcaatcatagctgtcaatgtcgtcatctagtctgacatatttttgacggccgcaattaaactgttaaattctgcccttgtaaccggtt 15019  T
Q  119 gatcacccatggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgc 183  Q
    |||| |||||||||||||| ||||| |||||||||  ||||||||||||||||| ||||||||||    
T  15020 gatctcccatggctgatcaagttagtaaaagaacacaagaaacctgctctgatatcaactgacgc 15084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 511  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 8603 - 8546
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8603 ttgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 23826 - 23769
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23826 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 16522 - 16579
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16522 ttgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 480
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  447 acaaggcatttctttattgattttgttttgtttc 480  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 37772 - 37714
Alignment:
Q  206 aagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagg 264  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37772 aagcgctaaacctagattgaaaagaacaagtttgcaagcgacaaacttatgaaaatagg 37714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 49375 - 49322
Alignment:
Q  214 aacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  49375 aacctagattgagaagaacaagtttgcaagcgacaaacttatgaaaatagggtt 49322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 98 - 41
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  98 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 354
Target Start/End: Original strand, 8243 - 8331
Alignment:
Q  265 gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaa-atctcgaataattttattgaatcaaaaagt 354  Q
    |||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| ||| |||||||| ||||| ||||||| |||||||    
T  8243 gttgcaagcgacaaacctgtcaaa-taagggtttctggaatccatcagaattgagaaaaagatctcgaa-aatttgattgaatgaaaaagt 8331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 9769 - 9702
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaacaagtttgcaagcgac--aaacttgtgaaaatagggtt 267  Q
    ||||||||  ||||||||||| ||||||||||||||| ||||||||  | ||||||||||||||||||    
T  9769 tagcaagcggtaaacctagattgaaaagaacaagtttccaagcgactaacacttgtgaaaatagggtt 9702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 17779 - 17640
Alignment:
Q  128 tggctgatcacgttagaaaaagaacaggagaaacctgctctgataccaactgacgcagtacggaagcgtagg-gttagcaagcactaaacctagatagaa 226  Q
    |||||||||||||||| ||||||| || |||||| | |||||||||||||| || |||| | || | |||   | ||||||||  ||||||||||| |||    
T  17779 tggctgatcacgttaggaaaagaatagtagaaacttactctgataccaactaacacagt-cagacgtgtaattgctagcaagcgttaaacctagattgaa 17681  T
Q  227 aagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |  ||||||||||||| |||||||||||| |||||| ||||    
T  17680 agaaacaagtttgcaaacgacaaacttgtcaaaatatggtt 17640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  357 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 411  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 497
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  466 attttgttttgtttcaaaataataaagtccct 497  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 391
Target Start/End: Complemental strand, 37 - 1
Alignment:
Q  355 tgttggaataagccctaatagccaatctatattgatt 391  Q
    |||||||||||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 145800 - 145734
Alignment:
Q  202 tagcaagcactaaacctagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 267  Q
    |||||| | |||||||||||| ||||| || |||||||||||||||||| ||||| |||||||||||    
T  145800 tagcaatcgctaaacctagattgaaaaaaatcaagtttgcaagcgacaagcttgtaaaaatagggtt 145734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 407
Target Start/End: Original strand, 5877 - 5930
Alignment:
Q  354 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 407  Q
    |||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||    
T  5877 ttgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 16466 - 16402
Alignment:
Q  199 ggttagcaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 263  Q
    |||||| || ||||||||||||||  |||| ||  ||||||||||||||||||||| ||||||||    
T  16466 ggttagtaaacactaaacctagattaaaaaaaatgagtttgcaagcgacaaacttgagaaaatag 16402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 28711 - 28744
Alignment:
Q  287 aaataagggtttccggaatccaccagaattgaga 320  Q
    |||||||||||||||||||| |||||||||||||    
T  28711 aaataagggtttccggaatctaccagaattgaga 28744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 548
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  476 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 548  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University