View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19630_high_21 (Length: 274)
Name: NF19630_high_21
Description: NF19630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19630_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 257
Target Start/End: Original strand, 34921431 - 34921678
Alignment:
| Q |
10 |
agatgaaaaattgagtacaaatatagtcaaagtcaaatgaaacctaaaagaaaaactatgagagccaattcaatataaaattaagaacaaattgatgaaa |
109 |
Q |
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| T |
34921431 |
agatgaaaaattgagtacaaatatagtcaaagtcaaatgaaacctaaaagaaaaactatgagagcaaattcaatataaaattaagaacaaattgatgaaa |
34921530 |
T |
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| Q |
110 |
ttgttggatgaaaactgagtgtgatattttcaaatgattacaaattataaaacaattttatgaagtaaaaaggggtagaattcttcaaatggtaatcttt |
209 |
Q |
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| T |
34921531 |
ttcttagatgaaaattgagtgtgatattttcaaatgattacaaattataaaacaattttatgaagtaaaaaggggtagaattcttcaaatggtaatcttt |
34921630 |
T |
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| Q |
210 |
ttctaacctctgcagtgcattcccataaacgttgcttaaggaaggaac |
257 |
Q |
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| T |
34921631 |
ttctaacctctgcagtgcattcccataaacgttgcttaaggaaggaac |
34921678 |
T |
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